0.006362
0.003673
0.000000
0.000000
0.007346
0.000000
0.000000
0.000000
0.025137
0.00000
0.00000
0.00000
Benach, J.
Kuzin, A.P.
Lee, I.
Rost, B.
Chiang, Y.
Acton, T.B.
Montelione, G.T.
Hunt, J.F.
Northeast Structural Genomics Consortium (NESG)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
157.185
157.185
39.782
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C21 H27 N7 O14 P2
663.425
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
278
19176
19182
10.1074/jbc.M301348200
12624088
The 2.3-A crystal structure of the shikimate 5-dehydrogenase orthologue YdiB from Escherichia coli suggests a novel catalytic environment for an NAD-dependent dehydrogenase
2003
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
90
1
CCD
2002-11-22
BRANDEIS - B4
Si
MULTIPLE WAVELENGTH
M
x-ray
1
0.979
1.0
0.9787
1.0
0.92
1.0
X12C
NSLS
0.979, 0.9787, 0.92
SYNCHROTRON
NSLS BEAMLINE X12C
31773.576
HYPOTHETICAL SHIKIMATE 5-DEHYDROGENASE-LIKE PROTEIN YDIB
1.1.1.25
2
man
polymer
663.425
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
2
syn
non-polymer
18.015
water
319
nat
water
no
yes
(MSE)DVTAKYELIGL(MSE)AYPIRHSLSPE(MSE)QNKALEKAGLPFTY(MSE)AFEVDNDSFPGAIEGLKALK
(MSE)RGTGVS(MSE)PNKQLACEYVDELTPAAKLVGAINTIVNDDGYLRGYNTDGTGHIRAIKESGFDIKGKT(MSE)V
LLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVG
(MSE)KPLENESLVNDISLLHPGLLVTECVYNPH(MSE)TKLLQQAQQAGCKTIDGYG(MSE)LLWQGAEQFTLWTGKDF
PLEYVKQV(MSE)GFGA
MDVTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNDSFPGAIEGLKALKMRGTGVSMPNKQLACEYVDE
LTPAAKLVGAINTIVNDDGYLRGYNTDGTGHIRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEF
FDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMTK
LLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDFPLEYVKQVMGFGA
A,B
ER24
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Escherichia
Escherichia
Escherichia coli
sample
562
Escherichia coli
469008
Escherichia coli BL21(DE3)
BL21 (DE3)
plasmid
pMGK
1
2.12
41.51
VAPOR DIFFUSION, HANGING DROP
5.2
200mM ammonium acetate, 100mM tri-sodium citrate dihydrate, 25% PEG 6000, pH 5.2, temperature 294K, VAPOR DIFFUSION, HANGING DROP
294
Northeast Structural Genomics Consortium
NESG
PSI, Protein Structure Initiative
pdbx_database_related
repository
Initial release
Version format compliance
Version format compliance
Database references
1
0
2003-01-28
1
1
2008-04-29
1
2
2011-07-13
1
3
2017-12-20
Y
RCSB
Y
RCSB
2003-01-17
REL
REL
NAD
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
HOH
water
NAD
300
2
NAD
NAD
300
A
NAD
300
2
NAD
NAD
300
B
HOH
3001
3
HOH
HOH
3001
A
HOH
3006
3
HOH
HOH
3006
A
HOH
3007
3
HOH
HOH
3007
A
HOH
3010
3
HOH
HOH
3010
A
HOH
3011
3
HOH
HOH
3011
A
HOH
3013
3
HOH
HOH
3013
A
HOH
3016
3
HOH
HOH
3016
A
HOH
3018
3
HOH
HOH
3018
A
HOH
3020
3
HOH
HOH
3020
A
HOH
3023
3
HOH
HOH
3023
A
HOH
3024
3
HOH
HOH
3024
A
HOH
3027
3
HOH
HOH
3027
A
HOH
3031
3
HOH
HOH
3031
A
HOH
3032
3
HOH
HOH
3032
A
HOH
3036
3
HOH
HOH
3036
A
HOH
3037
3
HOH
HOH
3037
A
HOH
3038
3
HOH
HOH
3038
A
HOH
3039
3
HOH
HOH
3039
A
HOH
3042
3
HOH
HOH
3042
A
HOH
3046
3
HOH
HOH
3046
A
HOH
3050
3
HOH
HOH
3050
A
HOH
3052
3
HOH
HOH
3052
A
HOH
3055
3
HOH
HOH
3055
A
HOH
3056
3
HOH
HOH
3056
A
HOH
3057
3
HOH
HOH
3057
A
HOH
3059
3
HOH
HOH
3059
A
HOH
3060
3
HOH
HOH
3060
A
HOH
3061
3
HOH
HOH
3061
A
HOH
3062
3
HOH
HOH
3062
A
HOH
3063
3
HOH
HOH
3063
A
HOH
3065
3
HOH
HOH
3065
A
HOH
3068
3
HOH
HOH
3068
A
HOH
3069
3
HOH
HOH
3069
A
HOH
3071
3
HOH
HOH
3071
A
HOH
3075
3
HOH
HOH
3075
A
HOH
3076
3
HOH
HOH
3076
A
HOH
3080
3
HOH
HOH
3080
A
HOH
3082
3
HOH
HOH
3082
A
HOH
3085
3
HOH
HOH
3085
A
HOH
3088
3
HOH
HOH
3088
A
HOH
3090
3
HOH
HOH
3090
A
HOH
3091
3
HOH
HOH
3091
A
HOH
3092
3
HOH
HOH
3092
A
HOH
3093
3
HOH
HOH
3093
A
HOH
3096
3
HOH
HOH
3096
A
HOH
3099
3
HOH
HOH
3099
A
HOH
3101
3
HOH
HOH
3101
A
HOH
3107
3
HOH
HOH
3107
A
HOH
3109
3
HOH
HOH
3109
A
HOH
3112
3
HOH
HOH
3112
A
HOH
3117
3
HOH
HOH
3117
A
HOH
3118
3
HOH
HOH
3118
A
HOH
3120
3
HOH
HOH
3120
A
HOH
3122
3
HOH
HOH
3122
A
HOH
3124
3
HOH
HOH
3124
A
HOH
3126
3
HOH
HOH
3126
A
HOH
3129
3
HOH
HOH
3129
A
HOH
3130
3
HOH
HOH
3130
A
HOH
3136
3
HOH
HOH
3136
A
HOH
3137
3
HOH
HOH
3137
A
HOH
3141
3
HOH
HOH
3141
A
HOH
3143
3
HOH
HOH
3143
A
HOH
3144
3
HOH
HOH
3144
A
HOH
3145
3
HOH
HOH
3145
A
HOH
3148
3
HOH
HOH
3148
A
HOH
3149
3
HOH
HOH
3149
A
HOH
3150
3
HOH
HOH
3150
A
HOH
3152
3
HOH
HOH
3152
A
HOH
3157
3
HOH
HOH
3157
A
HOH
3163
3
HOH
HOH
3163
A
HOH
3166
3
HOH
HOH
3166
A
HOH
3168
3
HOH
HOH
3168
A
HOH
3169
3
HOH
HOH
3169
A
HOH
3170
3
HOH
HOH
3170
A
HOH
3171
3
HOH
HOH
3171
A
HOH
3173
3
HOH
HOH
3173
A
HOH
3178
3
HOH
HOH
3178
A
HOH
3185
3
HOH
HOH
3185
A
HOH
3186
3
HOH
HOH
3186
A
HOH
3187
3
HOH
HOH
3187
A
HOH
3190
3
HOH
HOH
3190
A
HOH
3191
3
HOH
HOH
3191
A
HOH
3194
3
HOH
HOH
3194
A
HOH
3197
3
HOH
HOH
3197
A
HOH
3200
3
HOH
HOH
3200
A
HOH
3201
3
HOH
HOH
3201
A
HOH
3203
3
HOH
HOH
3203
A
HOH
3207
3
HOH
HOH
3207
A
HOH
3212
3
HOH
HOH
3212
A
HOH
3214
3
HOH
HOH
3214
A
HOH
3217
3
HOH
HOH
3217
A
HOH
3222
3
HOH
HOH
3222
A
HOH
3225
3
HOH
HOH
3225
A
HOH
3229
3
HOH
HOH
3229
A
HOH
3230
3
HOH
HOH
3230
A
HOH
3232
3
HOH
HOH
3232
A
HOH
3240
3
HOH
HOH
3240
A
HOH
3242
3
HOH
HOH
3242
A
HOH
3248
3
HOH
HOH
3248
A
HOH
3252
3
HOH
HOH
3252
A
HOH
3253
3
HOH
HOH
3253
A
HOH
3254
3
HOH
HOH
3254
A
HOH
3256
3
HOH
HOH
3256
A
HOH
3260
3
HOH
HOH
3260
A
HOH
3261
3
HOH
HOH
3261
A
HOH
3262
3
HOH
HOH
3262
A
HOH
3266
3
HOH
HOH
3266
A
HOH
3270
3
HOH
HOH
3270
A
HOH
3272
3
HOH
HOH
3272
A
HOH
3278
3
HOH
HOH
3278
A
HOH
3279
3
HOH
HOH
3279
A
HOH
3280
3
HOH
HOH
3280
A
HOH
3281
3
HOH
HOH
3281
A
HOH
3282
3
HOH
HOH
3282
A
HOH
3285
3
HOH
HOH
3285
A
HOH
3286
3
HOH
HOH
3286
A
HOH
3287
3
HOH
HOH
3287
A
HOH
3288
3
HOH
HOH
3288
A
HOH
3290
3
HOH
HOH
3290
A
HOH
3291
3
HOH
HOH
3291
A
HOH
3293
3
HOH
HOH
3293
A
HOH
3295
3
HOH
HOH
3295
A
HOH
3296
3
HOH
HOH
3296
A
HOH
3301
3
HOH
HOH
3301
A
HOH
3302
3
HOH
HOH
3302
A
HOH
3303
3
HOH
HOH
3303
A
HOH
3305
3
HOH
HOH
3305
A
HOH
3307
3
HOH
HOH
3307
A
HOH
3309
3
HOH
HOH
3309
A
HOH
3310
3
HOH
HOH
3310
A
HOH
3311
3
HOH
HOH
3311
A
HOH
3313
3
HOH
HOH
3313
A
HOH
3314
3
HOH
HOH
3314
A
HOH
3315
3
HOH
HOH
3315
A
HOH
3316
3
HOH
HOH
3316
A
HOH
3317
3
HOH
HOH
3317
A
HOH
3318
3
HOH
HOH
3318
A
HOH
3319
3
HOH
HOH
3319
A
HOH
3320
3
HOH
HOH
3320
A
HOH
3321
3
HOH
HOH
3321
A
HOH
3322
3
HOH
HOH
3322
A
HOH
3323
3
HOH
HOH
3323
A
HOH
3324
3
HOH
HOH
3324
A
HOH
3325
3
HOH
HOH
3325
A
HOH
3326
3
HOH
HOH
3326
A
HOH
3343
3
HOH
HOH
3343
A
HOH
3344
3
HOH
HOH
3344
A
HOH
3345
3
HOH
HOH
3345
A
HOH
3002
3
HOH
HOH
3002
B
HOH
3003
3
HOH
HOH
3003
B
HOH
3004
3
HOH
HOH
3004
B
HOH
3005
3
HOH
HOH
3005
B
HOH
3008
3
HOH
HOH
3008
B
HOH
3009
3
HOH
HOH
3009
B
HOH
3012
3
HOH
HOH
3012
B
HOH
3014
3
HOH
HOH
3014
B
HOH
3015
3
HOH
HOH
3015
B
HOH
3017
3
HOH
HOH
3017
B
HOH
3019
3
HOH
HOH
3019
B
HOH
3021
3
HOH
HOH
3021
B
HOH
3022
3
HOH
HOH
3022
B
HOH
3025
3
HOH
HOH
3025
B
HOH
3026
3
HOH
HOH
3026
B
HOH
3028
3
HOH
HOH
3028
B
HOH
3029
3
HOH
HOH
3029
B
HOH
3030
3
HOH
HOH
3030
B
HOH
3033
3
HOH
HOH
3033
B
HOH
3034
3
HOH
HOH
3034
B
HOH
3040
3
HOH
HOH
3040
B
HOH
3041
3
HOH
HOH
3041
B
HOH
3043
3
HOH
HOH
3043
B
HOH
3044
3
HOH
HOH
3044
B
HOH
3045
3
HOH
HOH
3045
B
HOH
3049
3
HOH
HOH
3049
B
HOH
3051
3
HOH
HOH
3051
B
HOH
3053
3
HOH
HOH
3053
B
HOH
3054
3
HOH
HOH
3054
B
HOH
3058
3
HOH
HOH
3058
B
HOH
3064
3
HOH
HOH
3064
B
HOH
3066
3
HOH
HOH
3066
B
HOH
3067
3
HOH
HOH
3067
B
HOH
3070
3
HOH
HOH
3070
B
HOH
3072
3
HOH
HOH
3072
B
HOH
3073
3
HOH
HOH
3073
B
HOH
3074
3
HOH
HOH
3074
B
HOH
3077
3
HOH
HOH
3077
B
HOH
3078
3
HOH
HOH
3078
B
HOH
3079
3
HOH
HOH
3079
B
HOH
3081
3
HOH
HOH
3081
B
HOH
3083
3
HOH
HOH
3083
B
HOH
3084
3
HOH
HOH
3084
B
HOH
3086
3
HOH
HOH
3086
B
HOH
3087
3
HOH
HOH
3087
B
HOH
3089
3
HOH
HOH
3089
B
HOH
3094
3
HOH
HOH
3094
B
HOH
3095
3
HOH
HOH
3095
B
HOH
3097
3
HOH
HOH
3097
B
HOH
3098
3
HOH
HOH
3098
B
HOH
3100
3
HOH
HOH
3100
B
HOH
3103
3
HOH
HOH
3103
B
HOH
3104
3
HOH
HOH
3104
B
HOH
3105
3
HOH
HOH
3105
B
HOH
3106
3
HOH
HOH
3106
B
HOH
3108
3
HOH
HOH
3108
B
HOH
3110
3
HOH
HOH
3110
B
HOH
3111
3
HOH
HOH
3111
B
HOH
3113
3
HOH
HOH
3113
B
HOH
3114
3
HOH
HOH
3114
B
HOH
3115
3
HOH
HOH
3115
B
HOH
3116
3
HOH
HOH
3116
B
HOH
3119
3
HOH
HOH
3119
B
HOH
3121
3
HOH
HOH
3121
B
HOH
3125
3
HOH
HOH
3125
B
HOH
3127
3
HOH
HOH
3127
B
HOH
3128
3
HOH
HOH
3128
B
HOH
3131
3
HOH
HOH
3131
B
HOH
3132
3
HOH
HOH
3132
B
HOH
3133
3
HOH
HOH
3133
B
HOH
3134
3
HOH
HOH
3134
B
HOH
3135
3
HOH
HOH
3135
B
HOH
3138
3
HOH
HOH
3138
B
HOH
3139
3
HOH
HOH
3139
B
HOH
3142
3
HOH
HOH
3142
B
HOH
3146
3
HOH
HOH
3146
B
HOH
3147
3
HOH
HOH
3147
B
HOH
3151
3
HOH
HOH
3151
B
HOH
3153
3
HOH
HOH
3153
B
HOH
3154
3
HOH
HOH
3154
B
HOH
3155
3
HOH
HOH
3155
B
HOH
3159
3
HOH
HOH
3159
B
HOH
3160
3
HOH
HOH
3160
B
HOH
3162
3
HOH
HOH
3162
B
HOH
3167
3
HOH
HOH
3167
B
HOH
3174
3
HOH
HOH
3174
B
HOH
3175
3
HOH
HOH
3175
B
HOH
3176
3
HOH
HOH
3176
B
HOH
3177
3
HOH
HOH
3177
B
HOH
3179
3
HOH
HOH
3179
B
HOH
3180
3
HOH
HOH
3180
B
HOH
3181
3
HOH
HOH
3181
B
HOH
3182
3
HOH
HOH
3182
B
HOH
3183
3
HOH
HOH
3183
B
HOH
3184
3
HOH
HOH
3184
B
HOH
3188
3
HOH
HOH
3188
B
HOH
3192
3
HOH
HOH
3192
B
HOH
3193
3
HOH
HOH
3193
B
HOH
3195
3
HOH
HOH
3195
B
HOH
3196
3
HOH
HOH
3196
B
HOH
3198
3
HOH
HOH
3198
B
HOH
3202
3
HOH
HOH
3202
B
HOH
3204
3
HOH
HOH
3204
B
HOH
3205
3
HOH
HOH
3205
B
HOH
3208
3
HOH
HOH
3208
B
HOH
3209
3
HOH
HOH
3209
B
HOH
3211
3
HOH
HOH
3211
B
HOH
3213
3
HOH
HOH
3213
B
HOH
3215
3
HOH
HOH
3215
B
HOH
3216
3
HOH
HOH
3216
B
HOH
3218
3
HOH
HOH
3218
B
HOH
3219
3
HOH
HOH
3219
B
HOH
3221
3
HOH
HOH
3221
B
HOH
3223
3
HOH
HOH
3223
B
HOH
3224
3
HOH
HOH
3224
B
HOH
3226
3
HOH
HOH
3226
B
HOH
3227
3
HOH
HOH
3227
B
HOH
3228
3
HOH
HOH
3228
B
HOH
3231
3
HOH
HOH
3231
B
HOH
3233
3
HOH
HOH
3233
B
HOH
3234
3
HOH
HOH
3234
B
HOH
3235
3
HOH
HOH
3235
B
HOH
3237
3
HOH
HOH
3237
B
HOH
3238
3
HOH
HOH
3238
B
HOH
3241
3
HOH
HOH
3241
B
HOH
3243
3
HOH
HOH
3243
B
HOH
3244
3
HOH
HOH
3244
B
HOH
3245
3
HOH
HOH
3245
B
HOH
3246
3
HOH
HOH
3246
B
HOH
3247
3
HOH
HOH
3247
B
HOH
3250
3
HOH
HOH
3250
B
HOH
3251
3
HOH
HOH
3251
B
HOH
3255
3
HOH
HOH
3255
B
HOH
3257
3
HOH
HOH
3257
B
HOH
3259
3
HOH
HOH
3259
B
HOH
3263
3
HOH
HOH
3263
B
HOH
3264
3
HOH
HOH
3264
B
HOH
3265
3
HOH
HOH
3265
B
HOH
3267
3
HOH
HOH
3267
B
HOH
3268
3
HOH
HOH
3268
B
HOH
3271
3
HOH
HOH
3271
B
HOH
3274
3
HOH
HOH
3274
B
HOH
3275
3
HOH
HOH
3275
B
HOH
3276
3
HOH
HOH
3276
B
HOH
3277
3
HOH
HOH
3277
B
HOH
3283
3
HOH
HOH
3283
B
HOH
3284
3
HOH
HOH
3284
B
HOH
3289
3
HOH
HOH
3289
B
HOH
3292
3
HOH
HOH
3292
B
HOH
3297
3
HOH
HOH
3297
B
HOH
3298
3
HOH
HOH
3298
B
HOH
3299
3
HOH
HOH
3299
B
HOH
3300
3
HOH
HOH
3300
B
HOH
3304
3
HOH
HOH
3304
B
HOH
3306
3
HOH
HOH
3306
B
HOH
3308
3
HOH
HOH
3308
B
HOH
3327
3
HOH
HOH
3327
B
HOH
3328
3
HOH
HOH
3328
B
HOH
3329
3
HOH
HOH
3329
B
HOH
3330
3
HOH
HOH
3330
B
HOH
3332
3
HOH
HOH
3332
B
HOH
3333
3
HOH
HOH
3333
B
HOH
3334
3
HOH
HOH
3334
B
HOH
3335
3
HOH
HOH
3335
B
HOH
3336
3
HOH
HOH
3336
B
HOH
3337
3
HOH
HOH
3337
B
HOH
3338
3
HOH
HOH
3338
B
HOH
3339
3
HOH
HOH
3339
B
HOH
3340
3
HOH
HOH
3340
B
HOH
3341
3
HOH
HOH
3341
B
HOH
3342
3
HOH
HOH
3342
B
MSE
1
n
1
MSE
1
A
ASP
2
n
2
ASP
2
A
VAL
3
n
3
VAL
3
A
THR
4
n
4
THR
4
A
ALA
5
n
5
ALA
5
A
LYS
6
n
6
LYS
6
A
TYR
7
n
7
TYR
7
A
GLU
8
n
8
GLU
8
A
LEU
9
n
9
LEU
9
A
ILE
10
n
10
ILE
10
A
GLY
11
n
11
GLY
11
A
LEU
12
n
12
LEU
12
A
MSE
13
n
13
MSE
13
A
ALA
14
n
14
ALA
14
A
TYR
15
n
15
TYR
15
A
PRO
16
n
16
PRO
16
A
ILE
17
n
17
ILE
17
A
ARG
18
n
18
ARG
18
A
HIS
19
n
19
HIS
19
A
SER
20
n
20
SER
20
A
LEU
21
n
21
LEU
21
A
SER
22
n
22
SER
22
A
PRO
23
n
23
PRO
23
A
GLU
24
n
24
GLU
24
A
MSE
25
n
25
MSE
25
A
GLN
26
n
26
GLN
26
A
ASN
27
n
27
ASN
27
A
LYS
28
n
28
LYS
28
A
ALA
29
n
29
ALA
29
A
LEU
30
n
30
LEU
30
A
GLU
31
n
31
GLU
31
A
LYS
32
n
32
LYS
32
A
ALA
33
n
33
ALA
33
A
GLY
34
n
34
GLY
34
A
LEU
35
n
35
LEU
35
A
PRO
36
n
36
PRO
36
A
PHE
37
n
37
PHE
37
A
THR
38
n
38
THR
38
A
TYR
39
n
39
TYR
39
A
MSE
40
n
40
MSE
40
A
ALA
41
n
41
ALA
41
A
PHE
42
n
42
PHE
42
A
GLU
43
n
43
GLU
43
A
VAL
44
n
44
VAL
44
A
ASP
45
n
45
ASP
45
A
ASN
46
n
46
ASN
46
A
ASP
47
n
47
ASP
47
A
SER
48
n
48
SER
48
A
PHE
49
n
49
PHE
49
A
PRO
50
n
50
PRO
50
A
GLY
51
n
51
GLY
51
A
ALA
52
n
52
ALA
52
A
ILE
53
n
53
ILE
53
A
GLU
54
n
54
GLU
54
A
GLY
55
n
55
GLY
55
A
LEU
56
n
56
LEU
56
A
LYS
57
n
57
LYS
57
A
ALA
58
n
58
ALA
58
A
LEU
59
n
59
LEU
59
A
LYS
60
n
60
LYS
60
A
MSE
61
n
61
MSE
61
A
ARG
62
n
62
ARG
62
A
GLY
63
n
63
GLY
63
A
THR
64
n
64
THR
64
A
GLY
65
n
65
GLY
65
A
VAL
66
n
66
VAL
66
A
SER
67
n
67
SER
67
A
MSE
68
n
68
MSE
68
A
PRO
69
n
69
PRO
69
A
ASN
70
n
70
ASN
70
A
LYS
71
n
71
LYS
71
A
GLN
72
n
72
GLN
72
A
LEU
73
n
73
LEU
73
A
ALA
74
n
74
ALA
74
A
CYS
75
n
75
CYS
75
A
GLU
76
n
76
GLU
76
A
TYR
77
n
77
TYR
77
A
VAL
78
n
78
VAL
78
A
ASP
79
n
79
ASP
79
A
GLU
80
n
80
GLU
80
A
LEU
81
n
81
LEU
81
A
THR
82
n
82
THR
82
A
PRO
83
n
83
PRO
83
A
ALA
84
n
84
ALA
84
A
ALA
85
n
85
ALA
85
A
LYS
86
n
86
LYS
86
A
LEU
87
n
87
LEU
87
A
VAL
88
n
88
VAL
88
A
GLY
89
n
89
GLY
89
A
ALA
90
n
90
ALA
90
A
ILE
91
n
91
ILE
91
A
ASN
92
n
92
ASN
92
A
THR
93
n
93
THR
93
A
ILE
94
n
94
ILE
94
A
VAL
95
n
95
VAL
95
A
ASN
96
n
96
ASN
96
A
ASP
97
n
97
ASP
97
A
ASP
98
n
98
ASP
98
A
GLY
99
n
99
GLY
99
A
TYR
100
n
100
TYR
100
A
LEU
101
n
101
LEU
101
A
ARG
102
n
102
ARG
102
A
GLY
103
n
103
GLY
103
A
TYR
104
n
104
TYR
104
A
ASN
105
n
105
ASN
105
A
THR
106
n
106
THR
106
A
ASP
107
n
107
ASP
107
A
GLY
108
n
108
GLY
108
A
THR
109
n
109
THR
109
A
GLY
110
n
110
GLY
110
A
HIS
111
n
111
HIS
111
A
ILE
112
n
112
ILE
112
A
ARG
113
n
113
ARG
113
A
ALA
114
n
114
ALA
114
A
ILE
115
n
115
ILE
115
A
LYS
116
n
116
LYS
116
A
GLU
117
n
117
GLU
117
A
SER
118
n
118
SER
118
A
GLY
119
n
119
GLY
119
A
PHE
120
n
120
PHE
120
A
ASP
121
n
121
ASP
121
A
ILE
122
n
122
ILE
122
A
LYS
123
n
123
LYS
123
A
GLY
124
n
124
GLY
124
A
LYS
125
n
125
LYS
125
A
THR
126
n
126
THR
126
A
MSE
127
n
127
MSE
127
A
VAL
128
n
128
VAL
128
A
LEU
129
n
129
LEU
129
A
LEU
130
n
130
LEU
130
A
GLY
131
n
131
GLY
131
A
ALA
132
n
132
ALA
132
A
GLY
133
n
133
GLY
133
A
GLY
134
n
134
GLY
134
A
ALA
135
n
135
ALA
135
A
SER
136
n
136
SER
136
A
THR
137
n
137
THR
137
A
ALA
138
n
138
ALA
138
A
ILE
139
n
139
ILE
139
A
GLY
140
n
140
GLY
140
A
ALA
141
n
141
ALA
141
A
GLN
142
n
142
GLN
142
A
GLY
143
n
143
GLY
143
A
ALA
144
n
144
ALA
144
A
ILE
145
n
145
ILE
145
A
GLU
146
n
146
GLU
146
A
GLY
147
n
147
GLY
147
A
LEU
148
n
148
LEU
148
A
LYS
149
n
149
LYS
149
A
GLU
150
n
150
GLU
150
A
ILE
151
n
151
ILE
151
A
LYS
152
n
152
LYS
152
A
LEU
153
n
153
LEU
153
A
PHE
154
n
154
PHE
154
A
ASN
155
n
155
ASN
155
A
ARG
156
n
156
ARG
156
A
ARG
157
n
157
ARG
157
A
ASP
158
n
158
ASP
158
A
GLU
159
n
159
GLU
159
A
PHE
160
n
160
PHE
160
A
PHE
161
n
161
PHE
161
A
ASP
162
n
162
ASP
162
A
LYS
163
n
163
LYS
163
A
ALA
164
n
164
ALA
164
A
LEU
165
n
165
LEU
165
A
ALA
166
n
166
ALA
166
A
PHE
167
n
167
PHE
167
A
ALA
168
n
168
ALA
168
A
GLN
169
n
169
GLN
169
A
ARG
170
n
170
ARG
170
A
VAL
171
n
171
VAL
171
A
ASN
172
n
172
ASN
172
A
GLU
173
n
173
GLU
173
A
ASN
174
n
174
ASN
174
A
THR
175
n
175
THR
175
A
ASP
176
n
176
ASP
176
A
CYS
177
n
177
CYS
177
A
VAL
178
n
178
VAL
178
A
VAL
179
n
179
VAL
179
A
THR
180
n
180
THR
180
A
VAL
181
n
181
VAL
181
A
THR
182
n
182
THR
182
A
ASP
183
n
183
ASP
183
A
LEU
184
n
184
LEU
184
A
ALA
185
n
185
ALA
185
A
ASP
186
n
186
ASP
186
A
GLN
187
n
187
GLN
187
A
GLN
188
n
188
GLN
188
A
ALA
189
n
189
ALA
189
A
PHE
190
n
190
PHE
190
A
ALA
191
n
191
ALA
191
A
GLU
192
n
192
GLU
192
A
ALA
193
n
193
ALA
193
A
LEU
194
n
194
LEU
194
A
ALA
195
n
195
ALA
195
A
SER
196
n
196
SER
196
A
ALA
197
n
197
ALA
197
A
ASP
198
n
198
ASP
198
A
ILE
199
n
199
ILE
199
A
LEU
200
n
200
LEU
200
A
THR
201
n
201
THR
201
A
ASN
202
n
202
ASN
202
A
GLY
203
n
203
GLY
203
A
THR
204
n
204
THR
204
A
LYS
205
n
205
LYS
205
A
VAL
206
n
206
VAL
206
A
GLY
207
n
207
GLY
207
A
MSE
208
n
208
MSE
208
A
LYS
209
n
209
LYS
209
A
PRO
210
n
210
PRO
210
A
LEU
211
n
211
LEU
211
A
GLU
212
n
212
GLU
212
A
ASN
213
n
213
ASN
213
A
GLU
214
n
214
GLU
214
A
SER
215
n
215
SER
215
A
LEU
216
n
216
LEU
216
A
VAL
217
n
217
VAL
217
A
ASN
218
n
218
ASN
218
A
ASP
219
n
219
ASP
219
A
ILE
220
n
220
ILE
220
A
SER
221
n
221
SER
221
A
LEU
222
n
222
LEU
222
A
LEU
223
n
223
LEU
223
A
HIS
224
n
224
HIS
224
A
PRO
225
n
225
PRO
225
A
GLY
226
n
226
GLY
226
A
LEU
227
n
227
LEU
227
A
LEU
228
n
228
LEU
228
A
VAL
229
n
229
VAL
229
A
THR
230
n
230
THR
230
A
GLU
231
n
231
GLU
231
A
CYS
232
n
232
CYS
232
A
VAL
233
n
233
VAL
233
A
TYR
234
n
234
TYR
234
A
ASN
235
n
235
ASN
235
A
PRO
236
n
236
PRO
236
A
HIS
237
n
237
HIS
237
A
MSE
238
n
238
MSE
238
A
THR
239
n
239
THR
239
A
LYS
240
n
240
LYS
240
A
LEU
241
n
241
LEU
241
A
LEU
242
n
242
LEU
242
A
GLN
243
n
243
GLN
243
A
GLN
244
n
244
GLN
244
A
ALA
245
n
245
ALA
245
A
GLN
246
n
246
GLN
246
A
GLN
247
n
247
GLN
247
A
ALA
248
n
248
ALA
248
A
GLY
249
n
249
GLY
249
A
CYS
250
n
250
CYS
250
A
LYS
251
n
251
LYS
251
A
THR
252
n
252
THR
252
A
ILE
253
n
253
ILE
253
A
ASP
254
n
254
ASP
254
A
GLY
255
n
255
GLY
255
A
TYR
256
n
256
TYR
256
A
GLY
257
n
257
GLY
257
A
MSE
258
n
258
MSE
258
A
LEU
259
n
259
LEU
259
A
LEU
260
n
260
LEU
260
A
TRP
261
n
261
TRP
261
A
GLN
262
n
262
GLN
262
A
GLY
263
n
263
GLY
263
A
ALA
264
n
264
ALA
264
A
GLU
265
n
265
GLU
265
A
GLN
266
n
266
GLN
266
A
PHE
267
n
267
PHE
267
A
THR
268
n
268
THR
268
A
LEU
269
n
269
LEU
269
A
TRP
270
n
270
TRP
270
A
THR
271
n
271
THR
271
A
GLY
272
n
272
GLY
272
A
LYS
273
n
273
LYS
273
A
ASP
274
n
274
ASP
274
A
PHE
275
n
275
PHE
275
A
PRO
276
n
276
PRO
276
A
LEU
277
n
277
LEU
277
A
GLU
278
n
278
GLU
278
A
TYR
279
n
279
TYR
279
A
VAL
280
n
280
VAL
280
A
LYS
281
n
281
LYS
281
A
GLN
282
n
282
GLN
282
A
VAL
283
n
283
VAL
283
A
MSE
284
n
284
MSE
284
A
GLY
285
n
285
GLY
285
A
PHE
286
n
286
PHE
286
A
GLY
287
n
287
GLY
287
A
n
288
288
A
MSE
1
n
1
MSE
1
B
ASP
2
n
2
ASP
2
B
VAL
3
n
3
VAL
3
B
THR
4
n
4
THR
4
B
ALA
5
n
5
ALA
5
B
LYS
6
n
6
LYS
6
B
TYR
7
n
7
TYR
7
B
GLU
8
n
8
GLU
8
B
LEU
9
n
9
LEU
9
B
ILE
10
n
10
ILE
10
B
GLY
11
n
11
GLY
11
B
LEU
12
n
12
LEU
12
B
MSE
13
n
13
MSE
13
B
ALA
14
n
14
ALA
14
B
TYR
15
n
15
TYR
15
B
PRO
16
n
16
PRO
16
B
ILE
17
n
17
ILE
17
B
ARG
18
n
18
ARG
18
B
HIS
19
n
19
HIS
19
B
SER
20
n
20
SER
20
B
LEU
21
n
21
LEU
21
B
SER
22
n
22
SER
22
B
PRO
23
n
23
PRO
23
B
GLU
24
n
24
GLU
24
B
MSE
25
n
25
MSE
25
B
GLN
26
n
26
GLN
26
B
ASN
27
n
27
ASN
27
B
LYS
28
n
28
LYS
28
B
ALA
29
n
29
ALA
29
B
LEU
30
n
30
LEU
30
B
GLU
31
n
31
GLU
31
B
LYS
32
n
32
LYS
32
B
ALA
33
n
33
ALA
33
B
GLY
34
n
34
GLY
34
B
LEU
35
n
35
LEU
35
B
PRO
36
n
36
PRO
36
B
PHE
37
n
37
PHE
37
B
THR
38
n
38
THR
38
B
TYR
39
n
39
TYR
39
B
MSE
40
n
40
MSE
40
B
ALA
41
n
41
ALA
41
B
PHE
42
n
42
PHE
42
B
GLU
43
n
43
GLU
43
B
VAL
44
n
44
VAL
44
B
ASP
45
n
45
ASP
45
B
ASN
46
n
46
ASN
46
B
ASP
47
n
47
ASP
47
B
SER
48
n
48
SER
48
B
PHE
49
n
49
PHE
49
B
PRO
50
n
50
PRO
50
B
GLY
51
n
51
GLY
51
B
ALA
52
n
52
ALA
52
B
ILE
53
n
53
ILE
53
B
GLU
54
n
54
GLU
54
B
GLY
55
n
55
GLY
55
B
LEU
56
n
56
LEU
56
B
LYS
57
n
57
LYS
57
B
ALA
58
n
58
ALA
58
B
LEU
59
n
59
LEU
59
B
LYS
60
n
60
LYS
60
B
MSE
61
n
61
MSE
61
B
ARG
62
n
62
ARG
62
B
GLY
63
n
63
GLY
63
B
THR
64
n
64
THR
64
B
GLY
65
n
65
GLY
65
B
VAL
66
n
66
VAL
66
B
SER
67
n
67
SER
67
B
MSE
68
n
68
MSE
68
B
PRO
69
n
69
PRO
69
B
ASN
70
n
70
ASN
70
B
LYS
71
n
71
LYS
71
B
GLN
72
n
72
GLN
72
B
LEU
73
n
73
LEU
73
B
ALA
74
n
74
ALA
74
B
CYS
75
n
75
CYS
75
B
GLU
76
n
76
GLU
76
B
TYR
77
n
77
TYR
77
B
VAL
78
n
78
VAL
78
B
ASP
79
n
79
ASP
79
B
GLU
80
n
80
GLU
80
B
LEU
81
n
81
LEU
81
B
THR
82
n
82
THR
82
B
PRO
83
n
83
PRO
83
B
ALA
84
n
84
ALA
84
B
ALA
85
n
85
ALA
85
B
LYS
86
n
86
LYS
86
B
LEU
87
n
87
LEU
87
B
VAL
88
n
88
VAL
88
B
GLY
89
n
89
GLY
89
B
ALA
90
n
90
ALA
90
B
ILE
91
n
91
ILE
91
B
ASN
92
n
92
ASN
92
B
THR
93
n
93
THR
93
B
ILE
94
n
94
ILE
94
B
VAL
95
n
95
VAL
95
B
ASN
96
n
96
ASN
96
B
ASP
97
n
97
ASP
97
B
ASP
98
n
98
ASP
98
B
GLY
99
n
99
GLY
99
B
TYR
100
n
100
TYR
100
B
LEU
101
n
101
LEU
101
B
ARG
102
n
102
ARG
102
B
GLY
103
n
103
GLY
103
B
TYR
104
n
104
TYR
104
B
ASN
105
n
105
ASN
105
B
THR
106
n
106
THR
106
B
ASP
107
n
107
ASP
107
B
GLY
108
n
108
GLY
108
B
THR
109
n
109
THR
109
B
GLY
110
n
110
GLY
110
B
HIS
111
n
111
HIS
111
B
ILE
112
n
112
ILE
112
B
ARG
113
n
113
ARG
113
B
ALA
114
n
114
ALA
114
B
ILE
115
n
115
ILE
115
B
LYS
116
n
116
LYS
116
B
GLU
117
n
117
GLU
117
B
SER
118
n
118
SER
118
B
GLY
119
n
119
GLY
119
B
PHE
120
n
120
PHE
120
B
ASP
121
n
121
ASP
121
B
ILE
122
n
122
ILE
122
B
LYS
123
n
123
LYS
123
B
GLY
124
n
124
GLY
124
B
LYS
125
n
125
LYS
125
B
THR
126
n
126
THR
126
B
MSE
127
n
127
MSE
127
B
VAL
128
n
128
VAL
128
B
LEU
129
n
129
LEU
129
B
LEU
130
n
130
LEU
130
B
GLY
131
n
131
GLY
131
B
ALA
132
n
132
ALA
132
B
GLY
133
n
133
GLY
133
B
GLY
134
n
134
GLY
134
B
ALA
135
n
135
ALA
135
B
SER
136
n
136
SER
136
B
THR
137
n
137
THR
137
B
ALA
138
n
138
ALA
138
B
ILE
139
n
139
ILE
139
B
GLY
140
n
140
GLY
140
B
ALA
141
n
141
ALA
141
B
GLN
142
n
142
GLN
142
B
GLY
143
n
143
GLY
143
B
ALA
144
n
144
ALA
144
B
ILE
145
n
145
ILE
145
B
GLU
146
n
146
GLU
146
B
GLY
147
n
147
GLY
147
B
LEU
148
n
148
LEU
148
B
LYS
149
n
149
LYS
149
B
GLU
150
n
150
GLU
150
B
ILE
151
n
151
ILE
151
B
LYS
152
n
152
LYS
152
B
LEU
153
n
153
LEU
153
B
PHE
154
n
154
PHE
154
B
ASN
155
n
155
ASN
155
B
ARG
156
n
156
ARG
156
B
ARG
157
n
157
ARG
157
B
ASP
158
n
158
ASP
158
B
GLU
159
n
159
GLU
159
B
PHE
160
n
160
PHE
160
B
PHE
161
n
161
PHE
161
B
ASP
162
n
162
ASP
162
B
LYS
163
n
163
LYS
163
B
ALA
164
n
164
ALA
164
B
LEU
165
n
165
LEU
165
B
ALA
166
n
166
ALA
166
B
PHE
167
n
167
PHE
167
B
ALA
168
n
168
ALA
168
B
GLN
169
n
169
GLN
169
B
ARG
170
n
170
ARG
170
B
VAL
171
n
171
VAL
171
B
ASN
172
n
172
ASN
172
B
GLU
173
n
173
GLU
173
B
ASN
174
n
174
ASN
174
B
THR
175
n
175
THR
175
B
ASP
176
n
176
ASP
176
B
CYS
177
n
177
CYS
177
B
VAL
178
n
178
VAL
178
B
VAL
179
n
179
VAL
179
B
THR
180
n
180
THR
180
B
VAL
181
n
181
VAL
181
B
THR
182
n
182
THR
182
B
ASP
183
n
183
ASP
183
B
LEU
184
n
184
LEU
184
B
ALA
185
n
185
ALA
185
B
ASP
186
n
186
ASP
186
B
GLN
187
n
187
GLN
187
B
GLN
188
n
188
GLN
188
B
ALA
189
n
189
ALA
189
B
PHE
190
n
190
PHE
190
B
ALA
191
n
191
ALA
191
B
GLU
192
n
192
GLU
192
B
ALA
193
n
193
ALA
193
B
LEU
194
n
194
LEU
194
B
ALA
195
n
195
ALA
195
B
SER
196
n
196
SER
196
B
ALA
197
n
197
ALA
197
B
ASP
198
n
198
ASP
198
B
ILE
199
n
199
ILE
199
B
LEU
200
n
200
LEU
200
B
THR
201
n
201
THR
201
B
ASN
202
n
202
ASN
202
B
GLY
203
n
203
GLY
203
B
THR
204
n
204
THR
204
B
LYS
205
n
205
LYS
205
B
VAL
206
n
206
VAL
206
B
GLY
207
n
207
GLY
207
B
MSE
208
n
208
MSE
208
B
LYS
209
n
209
LYS
209
B
PRO
210
n
210
PRO
210
B
LEU
211
n
211
LEU
211
B
GLU
212
n
212
GLU
212
B
ASN
213
n
213
ASN
213
B
GLU
214
n
214
GLU
214
B
SER
215
n
215
SER
215
B
LEU
216
n
216
LEU
216
B
VAL
217
n
217
VAL
217
B
ASN
218
n
218
ASN
218
B
ASP
219
n
219
ASP
219
B
ILE
220
n
220
ILE
220
B
SER
221
n
221
SER
221
B
LEU
222
n
222
LEU
222
B
LEU
223
n
223
LEU
223
B
HIS
224
n
224
HIS
224
B
PRO
225
n
225
PRO
225
B
GLY
226
n
226
GLY
226
B
LEU
227
n
227
LEU
227
B
LEU
228
n
228
LEU
228
B
VAL
229
n
229
VAL
229
B
THR
230
n
230
THR
230
B
GLU
231
n
231
GLU
231
B
CYS
232
n
232
CYS
232
B
VAL
233
n
233
VAL
233
B
TYR
234
n
234
TYR
234
B
ASN
235
n
235
ASN
235
B
PRO
236
n
236
PRO
236
B
HIS
237
n
237
HIS
237
B
MSE
238
n
238
MSE
238
B
THR
239
n
239
THR
239
B
LYS
240
n
240
LYS
240
B
LEU
241
n
241
LEU
241
B
LEU
242
n
242
LEU
242
B
GLN
243
n
243
GLN
243
B
GLN
244
n
244
GLN
244
B
ALA
245
n
245
ALA
245
B
GLN
246
n
246
GLN
246
B
GLN
247
n
247
GLN
247
B
ALA
248
n
248
ALA
248
B
GLY
249
n
249
GLY
249
B
CYS
250
n
250
CYS
250
B
LYS
251
n
251
LYS
251
B
THR
252
n
252
THR
252
B
ILE
253
n
253
ILE
253
B
ASP
254
n
254
ASP
254
B
GLY
255
n
255
GLY
255
B
TYR
256
n
256
TYR
256
B
GLY
257
n
257
GLY
257
B
MSE
258
n
258
MSE
258
B
LEU
259
n
259
LEU
259
B
LEU
260
n
260
LEU
260
B
TRP
261
n
261
TRP
261
B
GLN
262
n
262
GLN
262
B
GLY
263
n
263
GLY
263
B
ALA
264
n
264
ALA
264
B
GLU
265
n
265
GLU
265
B
GLN
266
n
266
GLN
266
B
PHE
267
n
267
PHE
267
B
THR
268
n
268
THR
268
B
LEU
269
n
269
LEU
269
B
TRP
270
n
270
TRP
270
B
THR
271
n
271
THR
271
B
GLY
272
n
272
GLY
272
B
LYS
273
n
273
LYS
273
B
ASP
274
n
274
ASP
274
B
PHE
275
n
275
PHE
275
B
PRO
276
n
276
PRO
276
B
LEU
277
n
277
LEU
277
B
GLU
278
n
278
GLU
278
B
TYR
279
n
279
TYR
279
B
VAL
280
n
280
VAL
280
B
LYS
281
n
281
LYS
281
B
GLN
282
n
282
GLN
282
B
VAL
283
n
283
VAL
283
B
MSE
284
n
284
MSE
284
B
GLY
285
n
285
GLY
285
B
PHE
286
n
286
PHE
286
B
GLY
287
n
287
GLY
287
B
ALA
288
n
288
ALA
288
B
author_and_software_defined_assembly
PISA
2
dimeric
5070
-34
23400
A
MSE
1
SELENOMETHIONINE
A
MSE
1
MET
A
MSE
13
SELENOMETHIONINE
A
MSE
13
MET
A
MSE
25
SELENOMETHIONINE
A
MSE
25
MET
A
MSE
40
SELENOMETHIONINE
A
MSE
40
MET
A
MSE
61
SELENOMETHIONINE
A
MSE
61
MET
A
MSE
68
SELENOMETHIONINE
A
MSE
68
MET
A
MSE
127
SELENOMETHIONINE
A
MSE
127
MET
A
MSE
208
SELENOMETHIONINE
A
MSE
208
MET
A
MSE
238
SELENOMETHIONINE
A
MSE
238
MET
A
MSE
258
SELENOMETHIONINE
A
MSE
258
MET
A
MSE
284
SELENOMETHIONINE
A
MSE
284
MET
B
MSE
1
SELENOMETHIONINE
B
MSE
1
MET
B
MSE
13
SELENOMETHIONINE
B
MSE
13
MET
B
MSE
25
SELENOMETHIONINE
B
MSE
25
MET
B
MSE
40
SELENOMETHIONINE
B
MSE
40
MET
B
MSE
61
SELENOMETHIONINE
B
MSE
61
MET
B
MSE
68
SELENOMETHIONINE
B
MSE
68
MET
B
MSE
127
SELENOMETHIONINE
B
MSE
127
MET
B
MSE
208
SELENOMETHIONINE
B
MSE
208
MET
B
MSE
238
SELENOMETHIONINE
B
MSE
238
MET
B
MSE
258
SELENOMETHIONINE
B
MSE
258
MET
B
MSE
284
SELENOMETHIONINE
B
MSE
284
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
PHE
42
A
O
PHE
42
A
N
LEU
12
A
N
LEU
12
A
N
GLY
11
A
N
GLY
11
A
O
GLY
65
A
O
GLY
65
A
N
THR
64
A
N
THR
64
A
O
ILE
94
A
O
ILE
94
A
N
ASP
97
A
N
ASP
97
A
O
TYR
100
A
O
TYR
100
A
O
GLY
103
A
O
GLY
103
A
N
GLU
80
A
N
GLU
80
A
O
THR
182
A
O
THR
182
A
N
LEU
153
A
N
LEU
153
A
O
PHE
154
A
O
PHE
154
A
N
LEU
129
A
N
LEU
129
A
N
LEU
130
A
N
LEU
130
A
O
THR
201
A
O
THR
201
A
N
LEU
200
A
N
LEU
200
A
O
LEU
228
A
O
LEU
228
A
N
VAL
229
A
N
VAL
229
A
O
ILE
253
A
O
ILE
253
B
N
GLU
80
B
N
GLU
80
B
O
GLY
103
B
O
GLY
103
B
O
TYR
100
B
O
TYR
100
B
N
ASP
97
B
N
ASP
97
B
O
ILE
94
B
O
ILE
94
B
N
THR
64
B
N
THR
64
B
O
GLY
65
B
O
GLY
65
B
N
GLY
11
B
N
GLY
11
B
N
ILE
10
B
N
ILE
10
B
O
THR
38
B
O
THR
38
B
N
GLU
80
B
N
GLU
80
B
O
GLY
103
B
O
GLY
103
B
O
TYR
100
B
O
TYR
100
B
N
ASP
97
B
N
ASP
97
B
O
ILE
94
B
O
ILE
94
B
N
THR
64
B
N
THR
64
B
O
GLY
65
B
O
GLY
65
B
N
GLY
11
B
N
GLY
11
B
N
ALA
14
B
N
ALA
14
B
O
PHE
42
B
O
PHE
42
B
O
THR
182
B
O
THR
182
B
N
LEU
153
B
N
LEU
153
B
O
LYS
152
B
O
LYS
152
B
N
MSE
127
B
N
MSE
127
B
N
VAL
128
B
N
VAL
128
B
O
ILE
199
B
O
ILE
199
B
N
LEU
200
B
N
LEU
200
B
O
LEU
228
B
O
LEU
228
B
N
VAL
229
B
N
VAL
229
B
O
LYS
251
B
O
LYS
251
1
A
ALA
288
A
ALA
288
1
Y
1
A
ILE
17
-156.62
-24.11
1
A
ARG
18
-54.53
-8.56
1
A
ALA
132
-145.44
17.84
1
A
ARG
156
-67.62
-176.29
1
A
ASP
158
-128.44
-166.79
1
A
LEU
184
-59.42
-7.73
1
A
SER
196
-95.63
36.42
1
A
LEU
211
-107.29
40.78
1
A
GLU
212
-55.27
-75.03
1
A
ASN
213
-65.78
31.70
1
A
LEU
222
-46.12
-18.48
1
A
ASN
235
-50.57
-76.55
1
A
ALA
245
-61.83
-72.14
1
A
GLN
246
-65.55
13.90
1
A
ASP
254
-57.33
174.53
1
B
ILE
17
-162.83
-7.16
1
B
ASP
45
-113.37
-168.80
1
B
ALA
132
-150.68
8.39
1
B
ASP
158
-121.00
-155.69
1
B
LEU
211
-79.39
48.63
1
B
GLN
247
-70.53
22.78
PROTEIN_REP.PARAM
PROTEIN.TOP
WATER_REP.PARAM
WATER.TOP
35.0
-1.15
4.56
0.00
-1.15
0.00
2.30
0.274
0.008
0.217
0.217
2.30
19.71
1260
25464
24734
5.1
97.0
RANDOM
1761858.67
1761858.67
0
1
RESTRAINED
THROUGHOUT
1.0
1
MAD
FLAT MODEL
44.4442
0.309068
0.38
0.28
5
0.37
0.23
2.30
19.71
319
4781
88
0
4374
0.009
1.3
22.7
0.93
1.45
1.50
2.34
2.00
2.50
2.00
3.55
2.50
0.344
0.024
0.252
2.44
206
3716
6
5.3
93.4
31.7
2.3
100
1NPD
48734
-3
0.092
1
31.2
10.93
99.8
0.373
2.3
2.37
5.31
4088
refinement
CNS
1.1
data reduction
DENZO
data scaling
SCALEPACK
phasing
SOLVE
phasing
RESOLVE
HYPOTHETICAL SHIKIMATE 5-DEHYDROGENASE-LIKE PROTEIN YDIB (E.C.1.1.1.25)
X-RAY STRUCTURE OF SHIKIMATE DEHYDROGENASE COMPLEXED WITH NAD+ FROM E.COLI (YDIB) NORTHEAST STRUCTURAL GENOMICS RESEARCH CONSORTIUM (NESG) TARGET ER24
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
A
LEU
21
A
LEU
21
HELX_P
A
ALA
33
A
ALA
33
1
1
13
A
SER
48
A
SER
48
HELX_P
A
LEU
59
A
LEU
59
1
2
12
A
GLN
72
A
GLN
72
HELX_P
A
VAL
78
A
VAL
78
5
3
7
A
THR
82
A
THR
82
HELX_P
A
GLY
89
A
GLY
89
1
4
8
A
ASN
105
A
ASN
105
HELX_P
A
SER
118
A
SER
118
1
5
14
A
GLY
133
A
GLY
133
HELX_P
A
GLU
146
A
GLU
146
1
6
14
A
ASP
158
A
ASP
158
HELX_P
A
THR
175
A
THR
175
1
7
18
A
PHE
190
A
PHE
190
HELX_P
A
ALA
195
A
ALA
195
1
8
6
A
ASP
219
A
ASP
219
HELX_P
A
LEU
223
A
LEU
223
5
9
5
A
THR
239
A
THR
239
HELX_P
A
GLN
246
A
GLN
246
1
10
8
A
ASP
254
A
ASP
254
HELX_P
A
GLY
272
A
GLY
272
1
11
19
A
PRO
276
A
PRO
276
HELX_P
A
MSE
284
A
MSE
284
1
12
9
B
LEU
21
B
LEU
21
HELX_P
B
ALA
33
B
ALA
33
1
13
13
B
SER
48
B
SER
48
HELX_P
B
LEU
59
B
LEU
59
1
14
12
B
GLN
72
B
GLN
72
HELX_P
B
VAL
78
B
VAL
78
5
15
7
B
THR
82
B
THR
82
HELX_P
B
GLY
89
B
GLY
89
1
16
8
B
ASN
105
B
ASN
105
HELX_P
B
SER
118
B
SER
118
1
17
14
B
GLY
133
B
GLY
133
HELX_P
B
GLU
146
B
GLU
146
1
18
14
B
PHE
160
B
PHE
160
HELX_P
B
THR
175
B
THR
175
1
19
16
B
ASP
186
B
ASP
186
HELX_P
B
SER
196
B
SER
196
1
20
11
B
ASP
219
B
ASP
219
HELX_P
B
LEU
223
B
LEU
223
5
21
5
B
THR
239
B
THR
239
HELX_P
B
GLN
247
B
GLN
247
1
22
9
B
ASP
254
B
ASP
254
HELX_P
B
GLY
272
B
GLY
272
1
23
19
B
PRO
276
B
PRO
276
HELX_P
B
MSE
284
B
MSE
284
1
24
9
covale
1.332
A
MSE
1
A
C
MSE
1
1_555
A
ASP
2
A
N
ASP
2
1_555
covale
1.331
A
LEU
12
A
C
LEU
12
1_555
A
MSE
13
A
N
MSE
13
1_555
covale
1.324
A
MSE
13
A
C
MSE
13
1_555
A
ALA
14
A
N
ALA
14
1_555
covale
1.320
A
GLU
24
A
C
GLU
24
1_555
A
MSE
25
A
N
MSE
25
1_555
covale
1.328
A
MSE
25
A
C
MSE
25
1_555
A
GLN
26
A
N
GLN
26
1_555
covale
1.324
A
TYR
39
A
C
TYR
39
1_555
A
MSE
40
A
N
MSE
40
1_555
covale
1.327
A
MSE
40
A
C
MSE
40
1_555
A
ALA
41
A
N
ALA
41
1_555
covale
1.329
A
LYS
60
A
C
LYS
60
1_555
A
MSE
61
A
N
MSE
61
1_555
covale
1.325
A
MSE
61
A
C
MSE
61
1_555
A
ARG
62
A
N
ARG
62
1_555
covale
1.328
A
SER
67
A
C
SER
67
1_555
A
MSE
68
A
N
MSE
68
1_555
covale
1.343
A
MSE
68
A
C
MSE
68
1_555
A
PRO
69
A
N
PRO
69
1_555
covale
1.326
A
THR
126
A
C
THR
126
1_555
A
MSE
127
A
N
MSE
127
1_555
covale
1.325
A
MSE
127
A
C
MSE
127
1_555
A
VAL
128
A
N
VAL
128
1_555
covale
1.330
A
GLY
207
A
C
GLY
207
1_555
A
MSE
208
A
N
MSE
208
1_555
covale
1.329
A
MSE
208
A
C
MSE
208
1_555
A
LYS
209
A
N
LYS
209
1_555
covale
1.329
A
HIS
237
A
C
HIS
237
1_555
A
MSE
238
A
N
MSE
238
1_555
covale
1.329
A
MSE
238
A
C
MSE
238
1_555
A
THR
239
A
N
THR
239
1_555
covale
1.331
A
GLY
257
A
C
GLY
257
1_555
A
MSE
258
A
N
MSE
258
1_555
covale
1.325
A
MSE
258
A
C
MSE
258
1_555
A
LEU
259
A
N
LEU
259
1_555
covale
1.329
A
VAL
283
A
C
VAL
283
1_555
A
MSE
284
A
N
MSE
284
1_555
covale
1.330
A
MSE
284
A
C
MSE
284
1_555
A
GLY
285
A
N
GLY
285
1_555
covale
1.335
B
MSE
1
B
C
MSE
1
1_555
B
ASP
2
B
N
ASP
2
1_555
covale
1.328
B
LEU
12
B
C
LEU
12
1_555
B
MSE
13
B
N
MSE
13
1_555
covale
1.328
B
MSE
13
B
C
MSE
13
1_555
B
ALA
14
B
N
ALA
14
1_555
covale
1.324
B
GLU
24
B
C
GLU
24
1_555
B
MSE
25
B
N
MSE
25
1_555
covale
1.331
B
MSE
25
B
C
MSE
25
1_555
B
GLN
26
B
N
GLN
26
1_555
covale
1.333
B
TYR
39
B
C
TYR
39
1_555
B
MSE
40
B
N
MSE
40
1_555
covale
1.332
B
MSE
40
B
C
MSE
40
1_555
B
ALA
41
B
N
ALA
41
1_555
covale
1.327
B
LYS
60
B
C
LYS
60
1_555
B
MSE
61
B
N
MSE
61
1_555
covale
1.328
B
MSE
61
B
C
MSE
61
1_555
B
ARG
62
B
N
ARG
62
1_555
covale
1.332
B
SER
67
B
C
SER
67
1_555
B
MSE
68
B
N
MSE
68
1_555
covale
1.342
B
MSE
68
B
C
MSE
68
1_555
B
PRO
69
B
N
PRO
69
1_555
covale
1.330
B
THR
126
B
C
THR
126
1_555
B
MSE
127
B
N
MSE
127
1_555
covale
1.329
B
MSE
127
B
C
MSE
127
1_555
B
VAL
128
B
N
VAL
128
1_555
covale
1.333
B
GLY
207
B
C
GLY
207
1_555
B
MSE
208
B
N
MSE
208
1_555
covale
1.331
B
MSE
208
B
C
MSE
208
1_555
B
LYS
209
B
N
LYS
209
1_555
covale
1.332
B
HIS
237
B
C
HIS
237
1_555
B
MSE
238
B
N
MSE
238
1_555
covale
1.324
B
MSE
238
B
C
MSE
238
1_555
B
THR
239
B
N
THR
239
1_555
covale
1.332
B
GLY
257
B
C
GLY
257
1_555
B
MSE
258
B
N
MSE
258
1_555
covale
1.334
B
MSE
258
B
C
MSE
258
1_555
B
LEU
259
B
N
LEU
259
1_555
covale
1.330
B
VAL
283
B
C
VAL
283
1_555
B
MSE
284
B
N
MSE
284
1_555
covale
1.328
B
MSE
284
B
C
MSE
284
1_555
B
GLY
285
B
N
GLY
285
1_555
STRUCTURAL GENOMICS, UNKNOWN FUNCTION
STRUCTURAL GENOMICS, PSI, Protein Structure Initiative, Northeast Structural Genomics Consortium, NESG, UNKNOWN FUNCTION
A
TYR
15
A
TYR
15
1
A
PRO
16
A
PRO
16
-0.12
A
MSE
68
A
MSE
68
1
A
PRO
69
A
PRO
69
-0.97
A
LYS
209
A
LYS
209
1
A
PRO
210
A
PRO
210
-0.13
B
TYR
15
B
TYR
15
1
B
PRO
16
B
PRO
16
-0.44
B
MSE
68
B
MSE
68
1
B
PRO
69
B
PRO
69
0.54
B
LYS
209
B
LYS
209
1
B
PRO
210
B
PRO
210
-0.20
B
ASN
235
B
ASN
235
1
B
PRO
236
B
PRO
236
0.32
YDIB_ECOLI
UNP
1
1
P0A6D5
MDVTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNDSFPGAIEGLKALKMRGTGVSMPNKQLACEYVDE
LTPAAKLVGAINTIVNDDGYLRGYNTDGTGHIRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEF
FDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMTK
LLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDFPLEYVKQVMGFGA
1
288
1NPD
1
288
P0A6D5
A
1
1
288
1
288
1NPD
1
288
P0A6D5
B
1
1
288
1
MET
MODIFIED RESIDUE
MSE
1
1NPD
A
P0A6D5
UNP
1
1
1
MET
MODIFIED RESIDUE
MSE
13
1NPD
A
P0A6D5
UNP
13
13
1
MET
MODIFIED RESIDUE
MSE
25
1NPD
A
P0A6D5
UNP
25
25
1
MET
MODIFIED RESIDUE
MSE
40
1NPD
A
P0A6D5
UNP
40
40
1
MET
MODIFIED RESIDUE
MSE
61
1NPD
A
P0A6D5
UNP
61
61
1
MET
MODIFIED RESIDUE
MSE
68
1NPD
A
P0A6D5
UNP
68
68
1
MET
MODIFIED RESIDUE
MSE
127
1NPD
A
P0A6D5
UNP
127
127
1
MET
MODIFIED RESIDUE
MSE
208
1NPD
A
P0A6D5
UNP
208
208
1
MET
MODIFIED RESIDUE
MSE
238
1NPD
A
P0A6D5
UNP
238
238
1
MET
MODIFIED RESIDUE
MSE
258
1NPD
A
P0A6D5
UNP
258
258
1
MET
MODIFIED RESIDUE
MSE
284
1NPD
A
P0A6D5
UNP
284
284
2
MET
MODIFIED RESIDUE
MSE
1
1NPD
B
P0A6D5
UNP
1
1
2
MET
MODIFIED RESIDUE
MSE
13
1NPD
B
P0A6D5
UNP
13
13
2
MET
MODIFIED RESIDUE
MSE
25
1NPD
B
P0A6D5
UNP
25
25
2
MET
MODIFIED RESIDUE
MSE
40
1NPD
B
P0A6D5
UNP
40
40
2
MET
MODIFIED RESIDUE
MSE
61
1NPD
B
P0A6D5
UNP
61
61
2
MET
MODIFIED RESIDUE
MSE
68
1NPD
B
P0A6D5
UNP
68
68
2
MET
MODIFIED RESIDUE
MSE
127
1NPD
B
P0A6D5
UNP
127
127
2
MET
MODIFIED RESIDUE
MSE
208
1NPD
B
P0A6D5
UNP
208
208
2
MET
MODIFIED RESIDUE
MSE
238
1NPD
B
P0A6D5
UNP
238
238
2
MET
MODIFIED RESIDUE
MSE
258
1NPD
B
P0A6D5
UNP
258
258
2
MET
MODIFIED RESIDUE
MSE
284
1NPD
B
P0A6D5
UNP
284
284
6
6
6
6
6
parallel
parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
A
PHE
37
A
PHE
37
A
GLU
43
A
GLU
43
A
GLU
8
A
GLU
8
A
ALA
14
A
ALA
14
A
GLY
63
A
GLY
63
A
VAL
66
A
VAL
66
A
THR
93
A
THR
93
A
ASP
97
A
ASP
97
A
TYR
100
A
TYR
100
A
TYR
104
A
TYR
104
A
GLU
80
A
GLU
80
A
LEU
81
A
LEU
81
A
VAL
178
A
VAL
178
A
ASP
183
A
ASP
183
A
GLU
150
A
GLU
150
A
ASN
155
A
ASN
155
A
THR
126
A
THR
126
A
LEU
130
A
LEU
130
A
ILE
199
A
ILE
199
A
ASN
202
A
ASN
202
A
LEU
228
A
LEU
228
A
GLU
231
A
GLU
231
A
THR
252
A
THR
252
A
ILE
253
A
ILE
253
B
GLU
80
B
GLU
80
B
LEU
81
B
LEU
81
B
TYR
100
B
TYR
100
B
TYR
104
B
TYR
104
B
THR
93
B
THR
93
B
ASP
97
B
ASP
97
B
GLY
63
B
GLY
63
B
VAL
66
B
VAL
66
B
GLU
8
B
GLU
8
B
ALA
14
B
ALA
14
B
PHE
37
B
PHE
37
B
TYR
39
B
TYR
39
B
GLU
80
B
GLU
80
B
LEU
81
B
LEU
81
B
TYR
100
B
TYR
100
B
TYR
104
B
TYR
104
B
THR
93
B
THR
93
B
ASP
97
B
ASP
97
B
GLY
63
B
GLY
63
B
VAL
66
B
VAL
66
B
GLU
8
B
GLU
8
B
ALA
14
B
ALA
14
B
PHE
42
B
PHE
42
B
GLU
43
B
GLU
43
B
VAL
178
B
VAL
178
B
ASP
183
B
ASP
183
B
GLU
150
B
GLU
150
B
ASN
155
B
ASN
155
B
THR
126
B
THR
126
B
LEU
130
B
LEU
130
B
ILE
199
B
ILE
199
B
ASN
202
B
ASN
202
B
LEU
228
B
LEU
228
B
GLU
231
B
GLU
231
B
LYS
251
B
LYS
251
B
ILE
253
B
ILE
253
BINDING SITE FOR RESIDUE NAD A 300
Software
26
BINDING SITE FOR RESIDUE NAD B 300
Software
24
A
ASP
107
A
ASP
107
26
1_555
A
GLY
131
A
GLY
131
26
1_555
A
ALA
132
A
ALA
132
26
1_555
A
GLY
133
A
GLY
133
26
1_555
A
GLY
134
A
GLY
134
26
1_555
A
ALA
135
A
ALA
135
26
1_555
A
ASN
155
A
ASN
155
26
1_555
A
ARG
156
A
ARG
156
26
1_555
A
ASP
158
A
ASP
158
26
1_555
A
PHE
160
A
PHE
160
26
1_555
A
LEU
184
A
LEU
184
26
1_555
A
GLY
203
A
GLY
203
26
1_555
A
THR
204
A
THR
204
26
1_555
A
LYS
205
A
LYS
205
26
1_555
A
VAL
206
A
VAL
206
26
1_555
A
MSE
208
A
MSE
208
26
1_555
A
CYS
232
A
CYS
232
26
1_555
A
VAL
233
A
VAL
233
26
1_555
A
TYR
234
A
TYR
234
26
1_555
A
ASN
235
A
ASN
235
26
1_555
A
GLY
255
A
GLY
255
26
1_555
A
MSE
258
A
MSE
258
26
1_555
A
LEU
259
A
LEU
259
26
1_555
A
HOH
3013
E
HOH
26
1_555
A
HOH
3320
E
HOH
26
1_555
A
HOH
3321
E
HOH
26
1_555
B
ASP
107
B
ASP
107
24
1_555
B
ALA
132
B
ALA
132
24
1_555
B
GLY
133
B
GLY
133
24
1_555
B
GLY
134
B
GLY
134
24
1_555
B
ALA
135
B
ALA
135
24
1_555
B
ASN
155
B
ASN
155
24
1_555
B
ARG
156
B
ARG
156
24
1_555
B
ASP
158
B
ASP
158
24
1_555
B
PHE
160
B
PHE
160
24
1_555
B
GLY
203
B
GLY
203
24
1_555
B
THR
204
B
THR
204
24
1_555
B
LYS
205
B
LYS
205
24
1_555
B
VAL
206
B
VAL
206
24
1_555
B
MSE
208
B
MSE
208
24
1_555
B
CYS
232
B
CYS
232
24
1_555
B
TYR
234
B
TYR
234
24
1_555
B
GLY
255
B
GLY
255
24
1_555
B
MSE
258
B
MSE
258
24
1_555
B
LEU
259
B
LEU
259
24
1_555
B
HOH
3014
F
HOH
24
1_555
B
HOH
3106
F
HOH
24
1_555
B
HOH
3111
F
HOH
24
1_555
B
HOH
3127
F
HOH
24
1_555
B
HOH
3271
F
HOH
24
1_555
172
P 64