0.028622 0.016525 0.000000 0.000000 0.033050 0.000000 0.000000 0.000000 0.027935 0.00000 0.00000 0.00000 Menchise, V. De Simone, G. Tedeschi, T. Corradini, R. Sforza, S. Marchelli, R. Capasso, D. Saviano, M. Pedone, C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 3 90.00 90.00 120.00 34.94 34.94 35.80 C15 H24 N8 O3 364.403 2-AMINOETHYLLYSINE-CARBONYLMETHYLENE-ADENINE L-peptide linking C11 H16 N7 O3 1 294.290 2-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-ADENINE peptide-like C14 H24 N6 O4 340.378 2-AMINOETHYLLYSINE-CARBONYLMETHYLENE-CYTOSINE L-peptide linking C10 H16 N5 O4 1 270.265 2-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-CYTOSINE peptide-like C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C11 H16 N7 O4 1 310.289 2-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-GUANINE peptide-like H2 O 18.015 WATER non-polymer Mg 2 24.305 MAGNESIUM ION non-polymer H2 N 16.023 AMINO GROUP non-polymer C15 H25 N5 O5 355.390 2-AMINOETHYLLYSINE-CARBONYLMETHYLENE-THYMINE L-peptide linking C11 H17 N4 O5 1 285.276 2-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-THYMINE peptide-like N 1 N C N 2 N C N 3 N O N 4 R C N 5 N C N 6 N O N 7 N O N 8 N N N 9 N C N 10 N C N 11 N N Y 12 N N Y 13 N C Y 14 N N Y 15 N C Y 16 N C N 17 N N Y 18 N N Y 19 N C Y 20 N N Y 21 N C N 22 N C N 23 N C N 24 N C N 25 N C N 26 N N N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N C N 52 N C N 53 N O N 54 N C N 55 N C N 56 N O N 57 N O N 58 N N N 59 N C N 60 N C N 61 N N Y 62 N N Y 63 N C Y 64 N N Y 65 N C Y 66 N C N 67 N N Y 68 N N Y 69 N C Y 70 N N Y 71 N C N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N C N 89 N C N 90 N O N 91 R C N 92 N C N 93 N O N 94 N O N 95 N N N 96 N C N 97 N C N 98 N N N 99 N N N 100 N C N 101 N N N 102 N C N 103 N C N 104 N C N 105 N O N 106 N N N 107 N C N 108 N C N 109 N C N 110 N C N 111 N N N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N C N 137 N C N 138 N O N 139 N C N 140 N C N 141 N O N 142 N O N 143 N N N 144 N C N 145 N C N 146 N N N 147 N N N 148 N C N 149 N N N 150 N C N 151 N C N 152 N C N 153 N O N 154 N N N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N O N 172 N P N 173 N O N 174 N O N 175 N O N 176 N C N 177 R C N 178 N O N 179 S C N 180 N O N 181 N C N 182 R C Y 183 N N Y 184 N C Y 185 N N Y 186 N C Y 187 N C N 188 N N Y 189 N N Y 190 N C Y 191 N N Y 192 N C N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N O N 208 N P N 209 N O N 210 N O N 211 N O N 212 N C N 213 R C N 214 N O N 215 S C N 216 N O N 217 N C N 218 R C N 219 N N N 220 N C N 221 N O N 222 N N N 223 N C N 224 N N N 225 N C N 226 N C N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N O N 242 N P N 243 N O N 244 N O N 245 N O N 246 N C N 247 R C N 248 N O N 249 S C N 250 N O N 251 N C N 252 R C Y 253 N N Y 254 N C Y 255 N N Y 256 N C N 257 N C N 258 N O N 259 N N N 260 N C N 261 N N N 262 N N Y 263 N C N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N O N 279 N P N 280 N O N 281 N O N 282 N O N 283 N C N 284 R C N 285 N O N 286 S C N 287 N O N 288 N C N 289 R C N 290 N N N 291 N C N 292 N O N 293 N N N 294 N C N 295 N O N 296 N C N 297 N C N 298 N C N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N C N 315 N C N 316 N O N 317 N C N 318 N C N 319 N O N 320 N O N 321 N N N 322 N C N 323 N C N 324 N N Y 325 N N Y 326 N C Y 327 N N Y 328 N C N 329 N C N 330 N O N 331 N N N 332 N C N 333 N N N 334 N N Y 335 N C N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N O N 353 N H N 354 N H N 355 N MG N 356 N N N 357 N H N 358 N H N 359 N C N 360 N C N 361 N O N 362 R C N 363 N C N 364 N O N 365 N O N 366 N N N 367 N C N 368 N C N 369 N N N 370 N N N 371 N C N 372 N C N 373 N O N 374 N N N 375 N C N 376 N O N 377 N C N 378 N C N 379 N C N 380 N C N 381 N C N 382 N C N 383 N N N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N C N 410 N C N 411 N O N 412 N C N 413 N C N 414 N O N 415 N O N 416 N N N 417 N C N 418 N C N 419 N N N 420 N N N 421 N C N 422 N C N 423 N O N 424 N N N 425 N C N 426 N O N 427 N C N 428 N C N 429 N H N 430 N H N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N doub N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N doub N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing Y 23 N sing Y 24 N sing Y 25 N doub N 26 N sing Y 27 N sing Y 28 N sing Y 29 N doub N 30 N sing Y 31 N doub N 32 N sing N 33 N sing Y 34 N sing Y 35 N doub N 36 N sing Y 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N doub N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N doub N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing Y 75 N sing Y 76 N sing Y 77 N doub N 78 N sing Y 79 N sing Y 80 N sing Y 81 N doub N 82 N sing Y 83 N doub N 84 N sing N 85 N sing Y 86 N sing Y 87 N doub N 88 N sing Y 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N doub N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N doub N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N doub N 116 N doub N 117 N sing N 118 N sing N 119 N doub N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N doub N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N doub N 165 N doub N 166 N sing N 167 N sing N 168 N doub N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N doub N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing Y 196 N sing Y 197 N sing Y 198 N doub N 199 N sing Y 200 N sing Y 201 N sing Y 202 N doub N 203 N sing Y 204 N doub N 205 N sing N 206 N sing Y 207 N sing Y 208 N doub N 209 N sing Y 210 N sing N 211 N sing N 212 N sing N 213 N doub N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N doub N 237 N sing N 238 N doub N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N doub N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing Y 269 N sing Y 270 N sing Y 271 N doub N 272 N sing Y 273 N sing N 274 N sing Y 275 N doub N 276 N doub N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N doub N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N doub N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N doub N 311 N sing N 312 N sing N 313 N sing N 314 N doub N 315 N sing N 316 N sing N 317 N doub N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N doub N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N doub N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing Y 345 N sing Y 346 N sing Y 347 N doub N 348 N sing Y 349 N sing N 350 N sing Y 351 N doub N 352 N doub N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N doub N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N doub N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N doub N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N doub N 390 N sing N 391 N doub N 392 N sing N 393 N sing N 394 N sing N 395 N doub N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N doub N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N doub N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N doub N 441 N sing N 442 N doub N 443 N sing N 444 N sing N 445 N sing N 446 N doub N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 100 12021 12026 10.1073/pnas.2034746100 14512516 Insights into peptide nucleic acid (PNA) structural features: The crystal structure of a D-lysine-based chiral PNA-DNA duplex 2003 DK Acta Crystallogr.,Sect.D ABCRE6 0766 0907-4449 58 553 555 10.1107/S0907444902001427 Crystallization and preliminary X-ray diffraction studies of a D-Lysine-based chiral PNA-DNA duplex 2002 10.2210/pdb1nr8/pdb pdb_00001nr8 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 100 2 CCD 2002-02-11 MARRESEARCH CCD MARRESEARCH SAD M x-ray 1 1.200 1.0 0.918 1.0 ID14-1 ESRF 1.200 SYNCHROTRON ESRF BEAMLINE ID14-1 5.2R ELETTRA 0.918 SYNCHROTRON ELETTRA BEAMLINE 5.2R DNA 3044.017 5'-D(P*AP*GP*TP*GP*AP*TP*CP*TP*AP*C)-3' 1 syn polymer peptide nucleic acid 2883.044 H-((GPN)*(TPN)*(APN)*(GPN)*(A66)*(T66)*(C66)*(APN)*(CPN)*(TPN))-NH2 1 syn polymer 24.305 MAGNESIUM ION 1 syn non-polymer 18.015 water 80 nat water no no (DA)(DG)(DT)(DG)(DA)(DT)(DC)(DT)(DA)(DC) AGTGATCTAC A polydeoxyribonucleotide no yes (GPN)(TPN)(APN)(GPN)(A66)(T66)(C66)(APN)(CPN)(TPN)(NH2) XXXXXXXXXXX B polydeoxyribonucleotide n n n n n n n n n n n n n n n n n n n n n 1 1.81 31.5 VAPOR DIFFUSION, HANGING DROP 6.3 PEG 8000, AMMONIUM ACETATE, SODIUM CACODYLATE, pH 6.3, VAPOR DIFFUSION, HANGING DROP, temperature 298K 298 VAPOR DIFFUSION, HANGING DROP 6.0 ISOPROPANOL, MAGNESIUM CHLORIDE, MES, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K 298 AMMONIUM ACETATE 1 PEG 8000 1 Na CACODYLATE 1 AMMONIUM ACETATE 2 PEG 8000 2 MgCl2 1 MES 1 ISOPROPANOL 1 MgCl2 2 ISOPROPANOL 2 7.882 1 20 A 1 B 10 0.415 A_DA1:TPN10_B 1 -12.647 -0.103 0.023 -0.161 -0.439 1 19 A 2 B 9 2.390 A_DG2:CPN9_B 2 -8.591 -0.476 0.028 -0.140 -1.331 1 20 A 3 B 8 3.602 A_DT3:APN8_B 3 -8.927 0.025 -0.118 -0.163 13.205 1 19 A 7 B 4 0.570 A_DC7:GPN4_B 4 0.152 0.159 -0.439 -0.130 3.338 1 20 A 8 B 3 2.710 A_DT8:APN3_B 5 -4.141 -0.091 -0.214 -0.133 16.341 1 20 A 9 B 2 2.835 A_DA9:TPN2_B 6 -3.207 0.186 0.069 -0.186 16.486 1 19 A 10 B 1 5.945 A_DC10:GPN1_B 7 -17.118 0.221 -0.136 -0.063 3.303 25.459 A A 1 2 7.455 B B 10 9 3.512 3.267 -0.909 -2.134 AA_DA1DG2:CPN9TPN10_BB 1 -3.382 7.718 25.028 -5.827 1.043 3.383 27.249 A A 2 3 -1.039 B B 9 8 3.372 -0.489 -1.213 -1.710 AA_DG2DT3:APN8CPN9_BB 2 0.432 -0.918 27.241 -3.504 2.686 4.001 24.412 A A 7 8 -4.361 B B 4 3 3.748 -1.832 -0.878 -2.237 AA_DC7DT8:APN3GPN4_BB 3 -4.582 10.909 23.916 -4.605 0.365 1.931 24.313 A A 8 9 32.608 B B 3 2 3.037 12.964 -0.674 -1.347 AA_DT8DA9:TPN2APN3_BB 4 -4.052 10.192 20.213 -6.593 0.539 3.817 17.291 A A 9 10 -12.636 B B 2 1 3.522 -3.765 0.547 -2.003 AA_DA9DC10:GPN1TPN2_BB 5 -1.368 4.593 16.824 -3.988 -2.791 atom_site chem_comp_atom chem_comp_bond database_2 struct_conn struct_site repository Initial release Version format compliance Non-polymer description Version format compliance Atomic model Data collection Database references Derived calculations 1 0 2003-10-28 1 1 2008-04-29 1 2 2011-07-13 2 0 2023-11-15 _atom_site.auth_atom_id _atom_site.label_atom_id _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id AN ACHIRAL PNA-DNA NMR STRUCTURE AN ACHIRAL PNA-PNA CRYSTAL STRUCTURE RCSB Y RCSB 2003-01-24 REL REL MG MAGNESIUM ION HOH water MG 9001 3 MG MG 9001 B HOH 5 4 HOH HOH 11 A HOH 9 4 HOH HOH 12 A HOH 11 4 HOH HOH 13 A HOH 12 4 HOH HOH 14 A HOH 13 4 HOH HOH 15 A HOH 14 4 HOH HOH 16 A HOH 17 4 HOH HOH 17 A HOH 22 4 HOH HOH 18 A HOH 24 4 HOH HOH 19 A HOH 25 4 HOH HOH 20 A HOH 26 4 HOH HOH 21 A HOH 28 4 HOH HOH 22 A HOH 29 4 HOH HOH 23 A HOH 30 4 HOH HOH 24 A HOH 33 4 HOH HOH 25 A HOH 34 4 HOH HOH 26 A HOH 35 4 HOH HOH 27 A HOH 36 4 HOH HOH 28 A HOH 37 4 HOH HOH 29 A HOH 38 4 HOH HOH 30 A HOH 39 4 HOH HOH 31 A HOH 40 4 HOH HOH 32 A HOH 41 4 HOH HOH 33 A HOH 42 4 HOH HOH 34 A HOH 47 4 HOH HOH 35 A HOH 51 4 HOH HOH 36 A HOH 52 4 HOH HOH 37 A HOH 54 4 HOH HOH 38 A HOH 55 4 HOH HOH 39 A HOH 56 4 HOH HOH 40 A HOH 57 4 HOH HOH 41 A HOH 61 4 HOH HOH 42 A HOH 62 4 HOH HOH 43 A HOH 63 4 HOH HOH 44 A HOH 66 4 HOH HOH 45 A HOH 67 4 HOH HOH 46 A HOH 68 4 HOH HOH 47 A HOH 69 4 HOH HOH 48 A HOH 70 4 HOH HOH 49 A HOH 72 4 HOH HOH 50 A HOH 75 4 HOH HOH 51 A HOH 79 4 HOH HOH 52 A HOH 1 4 HOH HOH 9002 B HOH 2 4 HOH HOH 9003 B HOH 3 4 HOH HOH 9004 B HOH 4 4 HOH HOH 9005 B HOH 6 4 HOH HOH 9006 B HOH 7 4 HOH HOH 9007 B HOH 8 4 HOH HOH 9008 B HOH 10 4 HOH HOH 9009 B HOH 15 4 HOH HOH 9010 B HOH 16 4 HOH HOH 9011 B HOH 18 4 HOH HOH 9012 B HOH 19 4 HOH HOH 9013 B HOH 20 4 HOH HOH 9014 B HOH 21 4 HOH HOH 9015 B HOH 23 4 HOH HOH 9016 B HOH 27 4 HOH HOH 9017 B HOH 31 4 HOH HOH 9018 B HOH 32 4 HOH HOH 9019 B HOH 43 4 HOH HOH 9020 B HOH 44 4 HOH HOH 9021 B HOH 45 4 HOH HOH 9022 B HOH 46 4 HOH HOH 9023 B HOH 48 4 HOH HOH 9024 B HOH 49 4 HOH HOH 9025 B HOH 50 4 HOH HOH 9026 B HOH 53 4 HOH HOH 9027 B HOH 58 4 HOH HOH 9028 B HOH 59 4 HOH HOH 9029 B HOH 60 4 HOH HOH 9030 B HOH 64 4 HOH HOH 9031 B HOH 65 4 HOH HOH 9032 B HOH 71 4 HOH HOH 9033 B HOH 73 4 HOH HOH 9034 B HOH 74 4 HOH HOH 9035 B HOH 76 4 HOH HOH 9036 B HOH 77 4 HOH HOH 9037 B HOH 78 4 HOH HOH 9038 B HOH 80 4 HOH HOH 9039 B A 1 n 1 DA 1 A G 2 n 2 DG 2 A T 3 n 3 DT 3 A G 4 n 4 DG 4 A A 5 n 5 DA 5 A T 6 n 6 DT 6 A C 7 n 7 DC 7 A T 8 n 8 DT 8 A A 9 n 9 DA 9 A C 10 n 10 DC 10 A GPN 1 n 1 GPN 1 B TPN 2 n 2 TPN 2 B APN 3 n 3 APN 3 B GPN 4 n 4 GPN 4 B A66 5 n 5 A66 5 B T66 6 n 6 T66 6 B C66 7 n 7 C66 7 B APN 8 n 8 APN 8 B CPN 9 n 9 CPN 9 B TPN 10 n 10 TPN 10 B NH2 11 n 11 NH2 11 B author_defined_assembly 2 dimeric B GPN 4 B N3 GPN 4 1_555 B MG 9001 C MG MG 1_555 B A66 5 B N1' A66 5 1_555 120.1 B GPN 4 B N3 GPN 4 1_555 B MG 9001 C MG MG 1_555 B HOH 9017 E O HOH 1_555 90.8 B A66 5 B N1' A66 5 1_555 B MG 9001 C MG MG 1_555 B HOH 9017 E O HOH 1_555 117.8 B GPN 1 B GPN 1 DG B TPN 2 B TPN 2 DT B APN 3 B APN 3 DA B GPN 4 B GPN 4 DG B APN 8 B APN 8 DA B CPN 9 B CPN 9 DC B TPN 10 B TPN 10 DT 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 B NH2 11 B NH2 11 0 Y 1 A DA 9 0.066 SIDE CHAIN 0.228 0.197 0.214 0.214 1.66 20.0 579 5429 5429 10.7 RANDOM 2 THROUGHOUT 0 SAD Engh & Huber 1.66 20.0 80 494 1 202 211 0.011 1.11 1.66 20.0 1NR8 5429 5429 0 0 0.06 2 15.4 97.8 1.66 1.72 5.1 525 0.185 2 95.1 data reduction DENZO data scaling SCALEPACK phasing SOLVE refinement CNS 1.1 The crystal structure of a D-Lysine-based chiral PNA-DNA duplex 1 N N 2 N N 3 N N 4 N N 4 N N covale 1.331 both B GPN 1 B C GPN 1 1_555 B TPN 2 B N TPN 2 1_555 covale 1.330 both B TPN 2 B C TPN 2 1_555 B APN 3 B N APN 3 1_555 covale 1.336 both B APN 3 B C APN 3 1_555 B GPN 4 B N GPN 4 1_555 covale 1.333 one B GPN 4 B C GPN 4 1_555 B A66 5 B N1' A66 5 1_555 covale 1.336 one B A66 5 B C' A66 5 1_555 B T66 6 B N1' T66 6 1_555 covale 1.320 one B T66 6 B C' T66 6 1_555 B C66 7 B N1' C66 7 1_555 covale 1.336 both B C66 7 B C' C66 7 1_555 B APN 8 B N APN 8 1_555 covale 1.328 both B APN 8 B C APN 8 1_555 B CPN 9 B N CPN 9 1_555 covale 1.333 both B CPN 9 B C CPN 9 1_555 B TPN 10 B N TPN 10 1_555 covale 1.324 both B TPN 10 B C TPN 10 1_555 B NH2 11 B N NH2 11 1_555 metalc 2.851 B GPN 4 B N3 GPN 4 1_555 B MG 9001 C MG MG 1_555 metalc 3.095 B A66 5 B N1' A66 5 1_555 B MG 9001 C MG MG 1_555 metalc 2.810 B MG 9001 C MG MG 1_555 B HOH 9017 E O HOH 1_555 hydrog WATSON-CRICK A DA 1 A N1 DA 1 1_555 B TPN 10 B N3 TPN 10 1_555 hydrog WATSON-CRICK A DA 1 A N6 DA 1 1_555 B TPN 10 B O4 TPN 10 1_555 hydrog WATSON-CRICK A DG 2 A N1 DG 2 1_555 B CPN 9 B N3 CPN 9 1_555 hydrog WATSON-CRICK A DG 2 A N2 DG 2 1_555 B CPN 9 B O2 CPN 9 1_555 hydrog WATSON-CRICK A DG 2 A O6 DG 2 1_555 B CPN 9 B N4 CPN 9 1_555 hydrog WATSON-CRICK A DT 3 A N3 DT 3 1_555 B APN 8 B N1 APN 8 1_555 hydrog WATSON-CRICK A DT 3 A O4 DT 3 1_555 B APN 8 B N6 APN 8 1_555 hydrog WATSON-CRICK A DC 7 A N3 DC 7 1_555 B GPN 4 B N1 GPN 4 1_555 hydrog WATSON-CRICK A DC 7 A N4 DC 7 1_555 B GPN 4 B O6 GPN 4 1_555 hydrog WATSON-CRICK A DC 7 A O2 DC 7 1_555 B GPN 4 B N2 GPN 4 1_555 hydrog WATSON-CRICK A DT 8 A N3 DT 8 1_555 B APN 3 B N1 APN 3 1_555 hydrog WATSON-CRICK A DT 8 A O4 DT 8 1_555 B APN 3 B N6 APN 3 1_555 hydrog WATSON-CRICK A DA 9 A N1 DA 9 1_555 B TPN 2 B N3 TPN 2 1_555 hydrog WATSON-CRICK A DA 9 A N6 DA 9 1_555 B TPN 2 B O4 TPN 2 1_555 hydrog WATSON-CRICK A DC 10 A N3 DC 10 1_555 B GPN 1 B N1 GPN 1 1_555 hydrog WATSON-CRICK A DC 10 A N4 DC 10 1_555 B GPN 1 B O6 GPN 1 1_555 hydrog WATSON-CRICK A DC 10 A O2 DC 10 1_555 B GPN 1 B N2 GPN 1 1_555 DNA/PEPTIDE NUCLEIC ACID CHIRAL PEPTIDE NUCLEIC ACID, DOUBLE STRANDED HELIX, P-FORM, DNA-PEPTIDE NUCLEIC ACID COMPLEX 1NR8 PDB 1 1NR8 1NR8 PDB 2 1NR8 1 10 1NR8 1 10 1NR8 A 1 1 10 1 11 1NR8 1 11 1NR8 B 2 1 11 BINDING SITE FOR RESIDUE MG B 9001 B MG 9001 Software 3 B GPN 4 B GPN 4 3 1_555 B A66 5 B A66 5 3 1_555 B HOH 9017 E HOH 3 1_555 144 trigonal P 31