1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Jablonsky, M.J.
Krishna, N.R.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
248
449
458
7739052
Solution structure of an Old World-like neurotoxin from the venom of the New World scorpion Centruroides sculpturatus Ewing.
1995
10.2210/pdb1nra/pdb
pdb_00001nra
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
7085.986
NEUROTOXIN V, CSE-V
1
man
polymer
no
no
KKDGYPVDSGNCKYECLKDDYCNDLCLERKADKGYCYWGKVSCYCYGLPDNSPTKTSGKCNPA
KKDGYPVDSGNCKYECLKDDYCNDLCLERKADKGYCYWGKVSCYCYGLPDNSPTKTSGKCNPA
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
bark scorpion
Centruroides
sample
218467
Centruroides sculpturatus
database_2
pdbx_database_status
pdbx_struct_assembly
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Other
1
0
1995-02-27
1
1
2008-03-24
1
2
2011-07-13
1
3
2022-02-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
Y
BNL
1995-01-03
REL
1
BRUNGER
refinement
X-PLOR
refinement
QUANTA
BROOKS ET AL.
refinement
CHARMM
LYS
1
n
1
LYS
1
A
LYS
2
n
2
LYS
2
A
ASP
3
n
3
ASP
3
A
GLY
4
n
4
GLY
4
A
TYR
5
n
5
TYR
5
A
PRO
6
n
6
PRO
6
A
VAL
7
n
7
VAL
7
A
ASP
8
n
8
ASP
8
A
SER
9
n
9
SER
9
A
GLY
10
n
10
GLY
10
A
ASN
11
n
11
ASN
11
A
CYS
12
n
12
CYS
12
A
LYS
13
n
13
LYS
13
A
TYR
14
n
14
TYR
14
A
GLU
15
n
15
GLU
15
A
CYS
16
n
16
CYS
16
A
LEU
17
n
17
LEU
17
A
LYS
18
n
18
LYS
18
A
ASP
19
n
19
ASP
19
A
ASP
20
n
20
ASP
20
A
TYR
21
n
21
TYR
21
A
CYS
22
n
22
CYS
22
A
ASN
23
n
23
ASN
23
A
ASP
24
n
24
ASP
24
A
LEU
25
n
25
LEU
25
A
CYS
26
n
26
CYS
26
A
LEU
27
n
27
LEU
27
A
GLU
28
n
28
GLU
28
A
ARG
29
n
29
ARG
29
A
LYS
30
n
30
LYS
30
A
ALA
31
n
31
ALA
31
A
ASP
32
n
32
ASP
32
A
LYS
33
n
33
LYS
33
A
GLY
34
n
34
GLY
34
A
TYR
35
n
35
TYR
35
A
CYS
36
n
36
CYS
36
A
TYR
37
n
37
TYR
37
A
TRP
38
n
38
TRP
38
A
GLY
39
n
39
GLY
39
A
LYS
40
n
40
LYS
40
A
VAL
41
n
41
VAL
41
A
SER
42
n
42
SER
42
A
CYS
43
n
43
CYS
43
A
TYR
44
n
44
TYR
44
A
CYS
45
n
45
CYS
45
A
TYR
46
n
46
TYR
46
A
GLY
47
n
47
GLY
47
A
LEU
48
n
48
LEU
48
A
PRO
49
n
49
PRO
49
A
ASP
50
n
50
ASP
50
A
ASN
51
n
51
ASN
51
A
SER
52
n
52
SER
52
A
PRO
53
n
53
PRO
53
A
THR
54
n
54
THR
54
A
LYS
55
n
55
LYS
55
A
THR
56
n
56
THR
56
A
SER
57
n
57
SER
57
A
GLY
58
n
58
GLY
58
A
LYS
59
n
59
LYS
59
A
CYS
60
n
60
CYS
60
A
ASN
61
n
61
ASN
61
A
PRO
62
n
62
PRO
62
A
ALA
63
n
63
ALA
63
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
LYS
33
A
O
LYS
33
A
N
TYR
46
A
N
TYR
46
A
O
CYS
45
A
O
CYS
45
A
N
GLY
4
A
N
GLY
4
1
A
ASP
8
-68.82
-163.24
1
A
ASN
11
78.50
41.50
1
A
LYS
18
-120.61
-167.09
1
A
ASP
24
-63.59
-70.70
1
A
LYS
30
83.48
10.80
1
A
TYR
35
-118.55
-169.00
1
A
TRP
38
-64.84
-100.87
1
A
VAL
41
-138.92
-104.48
1
A
SER
42
-175.94
-167.25
1
A
CYS
43
-61.32
-177.24
1
A
TYR
44
-160.14
118.53
1
A
SER
52
-41.37
107.18
1
A
PRO
53
-59.26
107.97
1
A
THR
56
-99.78
-94.99
model building
X-PLOR
refinement
X-PLOR
phasing
X-PLOR
SOLUTION STRUCTURE OF AN OLD WORLD-LIKE NEUROTOXIN FROM THE VENOM OF THE NEW WORLD SCORPION CENTRUROIDES SCULPTURATUS EWING
1
Y
N
A
ASP
20
A
ASP
20
HELX_P
A
GLU
28
A
GLU
28
1
1
9
disulf
2.021
A
CYS
12
A
SG
CYS
12
1_555
A
CYS
60
A
SG
CYS
60
1_555
disulf
2.021
A
CYS
16
A
SG
CYS
16
1_555
A
CYS
36
A
SG
CYS
36
1_555
disulf
2.021
A
CYS
22
A
SG
CYS
22
1_555
A
CYS
43
A
SG
CYS
43
1_555
disulf
2.020
A
CYS
26
A
SG
CYS
26
1_555
A
CYS
45
A
SG
CYS
45
1_555
NEUROTOXIN
NEUROTOXIN
SCXV_CENSC
UNP
1
1
P46066
KKDGYPVDSGNCKYECLKDDYCNDLCLERKADKGYCYWGKVSCYCYGLPDNSPTKTSGKCNPA
1
63
1NRA
1
63
P46066
A
1
1
63
3
anti-parallel
anti-parallel
A
LYS
33
A
LYS
33
A
TYR
37
A
TYR
37
A
SER
42
A
SER
42
A
LEU
48
A
LEU
48
A
LYS
2
A
LYS
2
A
GLY
4
A
GLY
4
1
P 1