0.021811
0.000000
0.000000
0.000000
0.021811
0.000000
0.000000
0.000000
0.007681
0.00000
0.00000
0.00000
Kerff, F.
Charlier, P.
Columbo, M.L.
Sauvage, E.
Brans, A.
Frere, J.M.
Joris, B.
Fonze, E.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
45.848
45.848
130.198
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
S
C
N
125
N
C
N
126
N
O
N
127
N
C
Y
128
N
C
Y
129
N
N
Y
130
N
C
Y
131
N
C
Y
132
N
N
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
S
C
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
S
C
N
171
N
C
N
172
N
O
N
173
N
C
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
O
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
N
N
192
S
C
N
193
N
C
N
194
N
O
N
195
N
C
N
196
N
C
N
197
N
C
N
198
N
C
N
199
N
N
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
N
N
217
S
C
N
218
N
C
N
219
N
O
N
220
N
C
N
221
N
C
N
222
N
S
N
223
N
C
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
N
N
237
S
C
N
238
N
C
N
239
N
O
N
240
N
C
Y
241
N
C
Y
242
N
C
Y
243
N
C
Y
244
N
C
Y
245
N
C
Y
246
N
C
N
247
N
O
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
N
N
260
S
C
N
261
N
C
N
262
N
O
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
N
N
277
S
C
N
278
N
C
N
279
N
O
N
280
N
C
N
281
N
O
N
282
N
O
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
R
C
N
295
N
O
N
296
N
C
N
297
N
O
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
N
N
308
S
C
N
309
N
C
N
310
N
O
N
311
N
C
Y
312
N
C
Y
313
N
C
Y
314
N
C
Y
315
N
N
Y
316
N
C
Y
317
N
C
Y
318
N
C
Y
319
N
C
Y
320
N
C
N
321
N
O
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
N
N
335
S
C
N
336
N
C
N
337
N
O
N
338
N
C
Y
339
N
C
Y
340
N
C
Y
341
N
C
Y
342
N
C
Y
343
N
C
Y
344
N
C
N
345
N
O
N
346
N
O
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
N
N
359
S
C
N
360
N
C
N
361
N
O
N
362
N
C
N
363
N
C
N
364
N
C
N
365
N
O
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
Y
235
N
doub
Y
236
N
sing
Y
237
N
sing
N
238
N
sing
Y
239
N
doub
N
240
N
sing
Y
241
N
doub
N
242
N
sing
Y
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
doub
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
doub
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
Y
304
N
doub
Y
305
N
sing
Y
306
N
sing
N
307
N
sing
Y
308
N
doub
Y
309
N
sing
Y
310
N
sing
N
311
N
sing
Y
312
N
sing
Y
313
N
doub
N
314
N
sing
Y
315
N
doub
N
316
N
sing
Y
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
doub
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
Y
332
N
doub
Y
333
N
sing
Y
334
N
sing
N
335
N
sing
Y
336
N
doub
N
337
N
sing
Y
338
N
doub
N
339
N
sing
Y
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
doub
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
42
12835
12843
10.1021/bi034976a
14596597
Crystal structure of the sensor domain of the BlaR penicillin receptor from Bacillus licheniformis.
2003
UK
MOL.MICROBIOL.
MOMIEE
2007
0950-382X
23
935
944
10.1046/j.1365-2958.1997.2761642.x
9076730
The penicillin sensory transducer, BlaR, involved in the inducibility of beta-lactamase synthesis in Bacillus licheniformis is embedded in the plasma membrane via a four-alpha-helix bundle
1997
10.2210/pdb1nrf/pdb
pdb_00001nrf
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2002-09-07
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
0.9786
1.0
BM30A
ESRF
0.9786
SYNCHROTRON
ESRF BEAMLINE BM30A
29902.072
REGULATORY PROTEIN BLAR1
C-terminal domain
1
man
polymer
18.015
water
81
nat
water
no
no
QEGTSPMQKETRFLPGTNVEYEDYSTFFDKFSASGGFVLFNSNRKKYTIYNRKESTSRFAPASTYKVFSALLALESGIIT
KNDSHMTWDGTQYPYKEWNQDQDLFSAMSSSTTWYFQKLDRQIGEDHLRHYLKSIHYGNEDFSVPADYWLDGSLQISPLE
QVNILKKFYDNEFDFKQSNIETVKDSIRLEESNGRVLSGKTGTSVINGELHAGWFIGYVETADNTFFFAVHIQGEKRAAG
SSAAEIALSILDKKGIYPSVSR
QEGTSPMQKETRFLPGTNVEYEDYSTFFDKFSASGGFVLFNSNRKKYTIYNRKESTSRFAPASTYKVFSALLALESGIIT
KNDSHMTWDGTQYPYKEWNQDQDLFSAMSSSTTWYFQKLDRQIGEDHLRHYLKSIHYGNEDFSVPADYWLDGSLQISPLE
QVNILKKFYDNEFDFKQSNIETVKDSIRLEESNGRVLSGKTGTSVINGELHAGWFIGYVETADNTFFFAVHIQGEKRAAG
SSAAEIALSILDKKGIYPSVSR
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Bacillus
749-I
Escherichia
sample
blaR1
1402
Bacillus licheniformis
562
Escherichia coli
pIN3-ompA
plasmid
1
2.34
47.11
VAPOR DIFFUSION, HANGING DROP
6.95
18% PEG 8000, 5% Glycerol, 50mM CaCl2 in 0.1M Cacodylate, pH 6.95, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Refinement description
1
0
2004-01-24
1
1
2008-04-29
1
2
2011-07-13
1
3
2024-03-13
1
4
2024-04-03
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
RCSB
Y
PDBJ
2003-01-24
REL
REL
HOH
water
1K38
Class D beta-lactamase OXA-2 from Salmonella typhimurium
PDB
experimental model
WAT
700
2
HOH
HOH
700
A
WAT
701
2
HOH
HOH
701
A
WAT
702
2
HOH
HOH
702
A
WAT
703
2
HOH
HOH
703
A
WAT
704
2
HOH
HOH
704
A
WAT
705
2
HOH
HOH
705
A
WAT
706
2
HOH
HOH
706
A
WAT
707
2
HOH
HOH
707
A
WAT
708
2
HOH
HOH
708
A
WAT
709
2
HOH
HOH
709
A
WAT
710
2
HOH
HOH
710
A
WAT
711
2
HOH
HOH
711
A
WAT
712
2
HOH
HOH
712
A
WAT
713
2
HOH
HOH
713
A
WAT
714
2
HOH
HOH
714
A
WAT
715
2
HOH
HOH
715
A
WAT
716
2
HOH
HOH
716
A
WAT
717
2
HOH
HOH
717
A
WAT
718
2
HOH
HOH
718
A
WAT
719
2
HOH
HOH
719
A
WAT
720
2
HOH
HOH
720
A
WAT
721
2
HOH
HOH
721
A
WAT
722
2
HOH
HOH
722
A
WAT
723
2
HOH
HOH
723
A
WAT
724
2
HOH
HOH
724
A
WAT
725
2
HOH
HOH
725
A
WAT
726
2
HOH
HOH
726
A
WAT
727
2
HOH
HOH
727
A
WAT
728
2
HOH
HOH
728
A
WAT
729
2
HOH
HOH
729
A
WAT
730
2
HOH
HOH
730
A
WAT
731
2
HOH
HOH
731
A
WAT
732
2
HOH
HOH
732
A
WAT
733
2
HOH
HOH
733
A
WAT
734
2
HOH
HOH
734
A
WAT
735
2
HOH
HOH
735
A
WAT
736
2
HOH
HOH
736
A
WAT
737
2
HOH
HOH
737
A
WAT
738
2
HOH
HOH
738
A
WAT
739
2
HOH
HOH
739
A
WAT
740
2
HOH
HOH
740
A
WAT
741
2
HOH
HOH
741
A
WAT
742
2
HOH
HOH
742
A
WAT
743
2
HOH
HOH
743
A
WAT
744
2
HOH
HOH
744
A
WAT
745
2
HOH
HOH
745
A
WAT
746
2
HOH
HOH
746
A
WAT
747
2
HOH
HOH
747
A
WAT
748
2
HOH
HOH
748
A
WAT
749
2
HOH
HOH
749
A
WAT
750
2
HOH
HOH
750
A
WAT
751
2
HOH
HOH
751
A
WAT
752
2
HOH
HOH
752
A
WAT
753
2
HOH
HOH
753
A
WAT
754
2
HOH
HOH
754
A
WAT
755
2
HOH
HOH
755
A
WAT
756
2
HOH
HOH
756
A
WAT
757
2
HOH
HOH
757
A
WAT
758
2
HOH
HOH
758
A
WAT
759
2
HOH
HOH
759
A
WAT
760
2
HOH
HOH
760
A
WAT
761
2
HOH
HOH
761
A
WAT
762
2
HOH
HOH
762
A
WAT
763
2
HOH
HOH
763
A
WAT
764
2
HOH
HOH
764
A
WAT
765
2
HOH
HOH
765
A
WAT
766
2
HOH
HOH
766
A
WAT
767
2
HOH
HOH
767
A
WAT
768
2
HOH
HOH
768
A
WAT
769
2
HOH
HOH
769
A
WAT
770
2
HOH
HOH
770
A
WAT
771
2
HOH
HOH
771
A
WAT
772
2
HOH
HOH
772
A
WAT
773
2
HOH
HOH
773
A
WAT
774
2
HOH
HOH
774
A
WAT
775
2
HOH
HOH
775
A
WAT
776
2
HOH
HOH
776
A
WAT
777
2
HOH
HOH
777
A
WAT
778
2
HOH
HOH
778
A
WAT
779
2
HOH
HOH
779
A
WAT
780
2
HOH
HOH
780
A
n
1
340
A
n
2
341
A
n
3
342
A
n
4
343
A
n
5
344
A
n
6
345
A
n
7
346
A
n
8
347
A
n
9
348
A
n
10
349
A
n
11
350
A
n
12
351
A
PHE
352
n
13
PHE
352
A
LEU
353
n
14
LEU
353
A
PRO
354
n
15
PRO
354
A
GLY
355
n
16
GLY
355
A
THR
356
n
17
THR
356
A
ASN
357
n
18
ASN
357
A
VAL
358
n
19
VAL
358
A
GLU
359
n
20
GLU
359
A
TYR
360
n
21
TYR
360
A
GLU
361
n
22
GLU
361
A
ASP
362
n
23
ASP
362
A
TYR
363
n
24
TYR
363
A
SER
364
n
25
SER
364
A
THR
365
n
26
THR
365
A
PHE
366
n
27
PHE
366
A
PHE
367
n
28
PHE
367
A
ASP
368
n
29
ASP
368
A
LYS
369
n
30
LYS
369
A
PHE
370
n
31
PHE
370
A
SER
371
n
32
SER
371
A
ALA
372
n
33
ALA
372
A
SER
373
n
34
SER
373
A
GLY
374
n
35
GLY
374
A
GLY
375
n
36
GLY
375
A
PHE
376
n
37
PHE
376
A
VAL
377
n
38
VAL
377
A
LEU
378
n
39
LEU
378
A
PHE
379
n
40
PHE
379
A
ASN
380
n
41
ASN
380
A
SER
381
n
42
SER
381
A
ASN
382
n
43
ASN
382
A
ARG
383
n
44
ARG
383
A
LYS
384
n
45
LYS
384
A
LYS
385
n
46
LYS
385
A
TYR
386
n
47
TYR
386
A
THR
387
n
48
THR
387
A
ILE
388
n
49
ILE
388
A
TYR
389
n
50
TYR
389
A
ASN
390
n
51
ASN
390
A
ARG
391
n
52
ARG
391
A
LYS
392
n
53
LYS
392
A
GLU
393
n
54
GLU
393
A
SER
394
n
55
SER
394
A
THR
395
n
56
THR
395
A
SER
396
n
57
SER
396
A
ARG
397
n
58
ARG
397
A
PHE
398
n
59
PHE
398
A
ALA
399
n
60
ALA
399
A
PRO
400
n
61
PRO
400
A
ALA
401
n
62
ALA
401
A
SER
402
n
63
SER
402
A
THR
403
n
64
THR
403
A
TYR
404
n
65
TYR
404
A
LYS
405
n
66
LYS
405
A
VAL
406
n
67
VAL
406
A
PHE
407
n
68
PHE
407
A
SER
408
n
69
SER
408
A
ALA
409
n
70
ALA
409
A
LEU
410
n
71
LEU
410
A
LEU
411
n
72
LEU
411
A
ALA
412
n
73
ALA
412
A
LEU
413
n
74
LEU
413
A
GLU
414
n
75
GLU
414
A
SER
415
n
76
SER
415
A
GLY
416
n
77
GLY
416
A
ILE
417
n
78
ILE
417
A
ILE
418
n
79
ILE
418
A
THR
419
n
80
THR
419
A
LYS
420
n
81
LYS
420
A
ASN
421
n
82
ASN
421
A
ASP
422
n
83
ASP
422
A
SER
423
n
84
SER
423
A
HIS
424
n
85
HIS
424
A
MET
425
n
86
MET
425
A
THR
426
n
87
THR
426
A
TRP
427
n
88
TRP
427
A
ASP
428
n
89
ASP
428
A
GLY
429
n
90
GLY
429
A
THR
430
n
91
THR
430
A
GLN
431
n
92
GLN
431
A
TYR
432
n
93
TYR
432
A
PRO
433
n
94
PRO
433
A
TYR
434
n
95
TYR
434
A
LYS
435
n
96
LYS
435
A
GLU
436
n
97
GLU
436
A
TRP
437
n
98
TRP
437
A
ASN
438
n
99
ASN
438
A
GLN
439
n
100
GLN
439
A
ASP
440
n
101
ASP
440
A
GLN
441
n
102
GLN
441
A
ASP
442
n
103
ASP
442
A
LEU
443
n
104
LEU
443
A
PHE
444
n
105
PHE
444
A
SER
445
n
106
SER
445
A
ALA
446
n
107
ALA
446
A
MET
447
n
108
MET
447
A
SER
448
n
109
SER
448
A
SER
449
n
110
SER
449
A
SER
450
n
111
SER
450
A
THR
451
n
112
THR
451
A
THR
452
n
113
THR
452
A
TRP
453
n
114
TRP
453
A
TYR
454
n
115
TYR
454
A
PHE
455
n
116
PHE
455
A
GLN
456
n
117
GLN
456
A
LYS
457
n
118
LYS
457
A
LEU
458
n
119
LEU
458
A
ASP
459
n
120
ASP
459
A
ARG
460
n
121
ARG
460
A
GLN
461
n
122
GLN
461
A
ILE
462
n
123
ILE
462
A
GLY
463
n
124
GLY
463
A
GLU
464
n
125
GLU
464
A
ASP
465
n
126
ASP
465
A
HIS
466
n
127
HIS
466
A
LEU
467
n
128
LEU
467
A
ARG
468
n
129
ARG
468
A
HIS
469
n
130
HIS
469
A
TYR
470
n
131
TYR
470
A
LEU
471
n
132
LEU
471
A
LYS
472
n
133
LYS
472
A
SER
473
n
134
SER
473
A
ILE
474
n
135
ILE
474
A
HIS
475
n
136
HIS
475
A
TYR
476
n
137
TYR
476
A
GLY
477
n
138
GLY
477
A
ASN
478
n
139
ASN
478
A
GLU
479
n
140
GLU
479
A
ASP
480
n
141
ASP
480
A
PHE
481
n
142
PHE
481
A
SER
482
n
143
SER
482
A
VAL
483
n
144
VAL
483
A
PRO
484
n
145
PRO
484
A
ALA
485
n
146
ALA
485
A
ASP
486
n
147
ASP
486
A
TYR
487
n
148
TYR
487
A
TRP
488
n
149
TRP
488
A
LEU
489
n
150
LEU
489
A
ASP
490
n
151
ASP
490
A
GLY
491
n
152
GLY
491
A
SER
492
n
153
SER
492
A
LEU
493
n
154
LEU
493
A
GLN
494
n
155
GLN
494
A
ILE
495
n
156
ILE
495
A
SER
496
n
157
SER
496
A
PRO
497
n
158
PRO
497
A
LEU
498
n
159
LEU
498
A
GLU
499
n
160
GLU
499
A
GLN
500
n
161
GLN
500
A
VAL
501
n
162
VAL
501
A
ASN
502
n
163
ASN
502
A
ILE
503
n
164
ILE
503
A
LEU
504
n
165
LEU
504
A
LYS
505
n
166
LYS
505
A
LYS
506
n
167
LYS
506
A
PHE
507
n
168
PHE
507
A
TYR
508
n
169
TYR
508
A
ASP
509
n
170
ASP
509
A
ASN
510
n
171
ASN
510
A
GLU
511
n
172
GLU
511
A
PHE
512
n
173
PHE
512
A
ASP
513
n
174
ASP
513
A
PHE
514
n
175
PHE
514
A
LYS
515
n
176
LYS
515
A
GLN
516
n
177
GLN
516
A
SER
517
n
178
SER
517
A
ASN
518
n
179
ASN
518
A
ILE
519
n
180
ILE
519
A
GLU
520
n
181
GLU
520
A
THR
521
n
182
THR
521
A
VAL
522
n
183
VAL
522
A
LYS
523
n
184
LYS
523
A
ASP
524
n
185
ASP
524
A
SER
525
n
186
SER
525
A
ILE
526
n
187
ILE
526
A
ARG
527
n
188
ARG
527
A
LEU
528
n
189
LEU
528
A
GLU
529
n
190
GLU
529
A
GLU
530
n
191
GLU
530
A
SER
531
n
192
SER
531
A
ASN
532
n
193
ASN
532
A
GLY
533
n
194
GLY
533
A
ARG
534
n
195
ARG
534
A
VAL
535
n
196
VAL
535
A
LEU
536
n
197
LEU
536
A
SER
537
n
198
SER
537
A
GLY
538
n
199
GLY
538
A
LYS
539
n
200
LYS
539
A
THR
540
n
201
THR
540
A
GLY
541
n
202
GLY
541
A
THR
542
n
203
THR
542
A
SER
543
n
204
SER
543
A
VAL
544
n
205
VAL
544
A
ILE
545
n
206
ILE
545
A
ASN
546
n
207
ASN
546
A
GLY
547
n
208
GLY
547
A
GLU
548
n
209
GLU
548
A
LEU
549
n
210
LEU
549
A
HIS
550
n
211
HIS
550
A
ALA
551
n
212
ALA
551
A
GLY
552
n
213
GLY
552
A
TRP
553
n
214
TRP
553
A
PHE
554
n
215
PHE
554
A
ILE
555
n
216
ILE
555
A
GLY
556
n
217
GLY
556
A
TYR
557
n
218
TYR
557
A
VAL
558
n
219
VAL
558
A
GLU
559
n
220
GLU
559
A
THR
560
n
221
THR
560
A
ALA
561
n
222
ALA
561
A
ASP
562
n
223
ASP
562
A
ASN
563
n
224
ASN
563
A
THR
564
n
225
THR
564
A
PHE
565
n
226
PHE
565
A
PHE
566
n
227
PHE
566
A
PHE
567
n
228
PHE
567
A
ALA
568
n
229
ALA
568
A
VAL
569
n
230
VAL
569
A
HIS
570
n
231
HIS
570
A
ILE
571
n
232
ILE
571
A
GLN
572
n
233
GLN
572
A
GLY
573
n
234
GLY
573
A
GLU
574
n
235
GLU
574
A
LYS
575
n
236
LYS
575
A
ARG
576
n
237
ARG
576
A
ALA
577
n
238
ALA
577
A
ALA
578
n
239
ALA
578
A
GLY
579
n
240
GLY
579
A
SER
580
n
241
SER
580
A
SER
581
n
242
SER
581
A
ALA
582
n
243
ALA
582
A
ALA
583
n
244
ALA
583
A
GLU
584
n
245
GLU
584
A
ILE
585
n
246
ILE
585
A
ALA
586
n
247
ALA
586
A
LEU
587
n
248
LEU
587
A
SER
588
n
249
SER
588
A
ILE
589
n
250
ILE
589
A
LEU
590
n
251
LEU
590
A
ASP
591
n
252
ASP
591
A
LYS
592
n
253
LYS
592
A
LYS
593
n
254
LYS
593
A
GLY
594
n
255
GLY
594
A
ILE
595
n
256
ILE
595
A
TYR
596
n
257
TYR
596
A
PRO
597
n
258
PRO
597
A
n
259
598
A
n
260
599
A
n
261
600
A
n
262
601
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLU
359
A
N
GLU
20
A
O
TYR
386
A
O
TYR
47
A
O
LYS
385
A
O
LYS
46
A
N
ASN
380
A
N
ASN
41
A
N
PHE
379
A
N
PHE
40
A
O
PHE
566
A
O
PHE
227
A
O
PHE
565
A
O
PHE
226
A
N
VAL
558
A
N
VAL
219
A
O
ALA
551
A
O
ALA
212
A
N
SER
543
A
N
SER
204
A
O
ARG
534
A
O
ARG
195
A
N
SER
531
A
N
SER
192
1
A
GLN
340
A
GLN
1
1
Y
1
A
GLU
341
A
GLU
2
1
Y
1
A
GLY
342
A
GLY
3
1
Y
1
A
THR
343
A
THR
4
1
Y
1
A
SER
344
A
SER
5
1
Y
1
A
PRO
345
A
PRO
6
1
Y
1
A
MET
346
A
MET
7
1
Y
1
A
GLN
347
A
GLN
8
1
Y
1
A
LYS
348
A
LYS
9
1
Y
1
A
GLU
349
A
GLU
10
1
Y
1
A
THR
350
A
THR
11
1
Y
1
A
ARG
351
A
ARG
12
1
Y
1
A
SER
598
A
SER
259
1
Y
1
A
VAL
599
A
VAL
260
1
Y
1
A
SER
600
A
SER
261
1
Y
1
A
ARG
601
A
ARG
262
1
Y
1
A
A
C
CA
ASN
GLY
546
547
1.64
1
A
A
CA
N
ASN
GLY
546
547
1.68
1
A
A
O
N
VAL
ILE
544
545
1.73
1
A
VAL
544
34.33
1
A
A
C
N
VAL
ILE
544
545
1.13
1
A
A
C
N
ASN
GLY
546
547
1.10
1
-29.00
1.60
122.70
93.70
A
A
A
O
C
N
VAL
VAL
ILE
544
544
545
Y
1
-38.87
2.00
116.20
77.33
A
A
A
CA
C
N
ASN
ASN
GLY
546
546
547
Y
1
30.91
1.70
123.20
154.11
A
A
A
O
C
N
ASN
ASN
GLY
546
546
547
Y
1
-43.85
2.10
122.30
78.45
A
A
A
C
N
CA
ASN
GLY
GLY
546
547
547
Y
1
A
A
C
N
VAL
ILE
544
545
-0.201
0.023
1.336
1.135
Y
1
A
A
C
N
ASN
GLY
546
547
-0.238
0.023
1.336
1.098
Y
1
A
ASN
390
63.90
79.83
1
A
ALA
401
54.54
-149.04
1
A
ASP
428
-36.78
-73.96
1
A
PRO
433
-58.95
-6.69
1
A
THR
451
-67.67
94.44
1
A
HIS
475
39.75
67.49
1
A
SER
482
-105.68
-81.42
1
A
ASP
486
-147.15
17.85
1
A
LEU
489
-130.32
-35.33
1
A
ASN
532
38.33
-89.14
1
A
ASN
546
-169.39
-112.16
1
A
GLU
548
-77.85
37.76
PROTEIN_REP.PARAM
PROTEIN.TOP
WATER_REP.PARAM
WATER.TOP
40.0
1.85
0.00
0.00
1.85
0.00
-3.69
0.257
0.012
0.204
2.50
31.52
442
9234
8827
5.0
95.0
RANDOM
1
RESTRAINED
THROUGHOUT
2.00
MOLECULAR REPLACEMENT
Class D beta-lactamase OXA-2 from Salmonella typhimurium
Engh & Huber
FLAT MODEL
53.7379
0.367659
0.39
0.27
5.00
0.29
0.20
2.50
31.52
81
2085
0
0
2004
0.007
1.1
23.1
0.74
1.72
1.50
2.79
2.00
2.00
2.00
2.95
2.50
0.312
0.036
0.213
2.66
77
1284
1284
6
5.7
89.1
40.3
2.44
32.444
1NRF
9979
9979
0.0
0.0
0.069
0.059
1
8.9
4.0
99.7
0.232
2.44
2.50
3.7
745
0.201
4.0
100
refinement
CNS
1.0
data reduction
MOSFLM
data scaling
CCP4
(SCALA)
phasing
AMoRE
C-terminal domain of the Bacillus licheniformis BlaR penicillin-receptor
1
N
N
2
N
N
A
TYR
363
A
TYR
24
HELX_P
A
LYS
369
A
LYS
30
1
1
7
A
ASN
390
A
ASN
51
HELX_P
A
SER
396
A
SER
57
1
2
7
A
PRO
400
A
PRO
61
HELX_P
A
THR
403
A
THR
64
5
3
4
A
TYR
404
A
TYR
65
HELX_P
A
SER
415
A
SER
76
1
4
12
A
ASP
442
A
ASP
103
HELX_P
A
SER
450
A
SER
111
1
5
9
A
THR
451
A
THR
112
HELX_P
A
GLY
463
A
GLY
124
1
6
13
A
GLY
463
A
GLY
124
HELX_P
A
ILE
474
A
ILE
135
1
7
12
A
SER
496
A
SER
157
HELX_P
A
ASP
509
A
ASP
170
1
8
14
A
LYS
515
A
LYS
176
HELX_P
A
ILE
526
A
ILE
187
1
9
12
A
ALA
577
A
ALA
238
HELX_P
A
LYS
593
A
LYS
254
1
10
17
MEMBRANE PROTEIN
Penicillin-receptor, Beta-lactamase induction, Bacillus licheniformis, Penicillin-Binding Protein, MEMBRANE PROTEIN
BLAR_BACLI
UNP
1
346
P12287
MQKETRFLPGTNVEYEDYSTFFDKFSASGGFVLFNSNRKKYTIYNRKESTSRFAPASTYKVFSALLALESGIITKNDSHM
TWDGTQYPYKEWNQDQDLFSAMSSSTTWYFQKLDRQIGEDHLRHYLKSIHYGNEDFSVPADYWLDGSLQISPLEQVNILK
KFYDNEFDFKQSNIETVKDSIRLEESNGRVLSGKTGTSVINGELHAGWFIGYVETADNTFFFAVHIQGEKRAAGSSAAEI
ALSILDKKGIYPSVSR
346
601
1NRF
346
601
P12287
A
1
7
262
1
cloning artifact
GLN
340
1NRF
A
P12287
UNP
1
1
cloning artifact
GLU
341
1NRF
A
P12287
UNP
2
1
cloning artifact
GLY
342
1NRF
A
P12287
UNP
3
1
cloning artifact
THR
343
1NRF
A
P12287
UNP
4
1
cloning artifact
SER
344
1NRF
A
P12287
UNP
5
1
cloning artifact
PRO
345
1NRF
A
P12287
UNP
6
7
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ASN
357
A
ASN
18
A
TYR
360
A
TYR
21
A
LYS
385
A
LYS
46
A
TYR
389
A
TYR
50
A
ALA
372
A
ALA
33
A
ASN
380
A
ASN
41
A
THR
564
A
THR
225
A
GLY
573
A
GLY
234
A
HIS
550
A
HIS
211
A
GLU
559
A
GLU
220
A
ARG
534
A
ARG
195
A
VAL
544
A
VAL
205
A
ARG
527
A
ARG
188
A
SER
531
A
SER
192
76
P 41