0.039730
0.000000
0.000000
0.000000
0.013231
0.000000
0.000000
0.000000
0.027886
0.00000
0.00000
0.00000
CIS PROLINE - PRO 7
RESIDUES 69 - 71 ARE POORLY DEFINED IN THE ELECTRON-DENSITY MAP AND IN REFINEMENT AND MAY BE CORRECTED AT HIGHER RESOLUTION.
Mikhailov, A.M.
Nickitenko, A.V.
Vainshtein, B.K.
Betzel, C.
Wilson, K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
25.170
75.580
35.860
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
NE
Febs Lett.
FEBLAL
0165
0014-5793
320
111
117
10.1016/0014-5793(93)80073-4
8458425
Three-dimensional structure of neurotoxin-1 from Naja naja oxiana venom at 1.9 A resolution.
1993
NE
FEBS Lett.
FEBLAL
0165
0014-5793
320
111
Three-Dimensional Structure of Neurotoxin-1 from Naja Naja Oxiana Venom at 1.9 Angstroms Resolution
1993
UR
Bioorg.Khim.
BIKHD7
0364
0132-3423
17
372
Spatial Organization of Backbone of the Neurotoxin-I Molecule from the Naja Naja Oxiana Venom and its Crystal Packing (in Russian)
1991
NE
FEBS Lett.
FEBLAL
0165
0014-5793
269
255
257
Crystallization and Preliminary X-Ray Diffraction Study of Neurotoxin-I from Naja Naja Oxiana Venom
1990
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
x-ray
1
1.0
7942.115
NEUROTOXIN I
1
man
polymer
18.015
water
65
nat
water
no
no
ITCYKTPIITSETCAPGQNLCYTKTWCDAWCGSRGKVIELGCAATCPTVESYQDIKCCSTDNCNPHPKQKRP
ITCYKTPIITSETCAPGQNLCYTKTWCDAWCGSRGKVIELGCAATCPTVESYQDIKCCSTDNCNPHPKQKRP
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Central Asian cobra
Naja
sample
8657
Naja oxiana
2.15
42.68
pdbx_database_status
struct_conf
struct_conf_type
repository
Initial release
Version format compliance
Version format compliance
Derived calculations
Other
1
0
1995-05-08
1
1
2008-03-24
1
2
2011-07-13
1
3
2017-11-29
_pdbx_database_status.process_site
Y
BNL
1994-09-26
REL
REL
HOH
water
HOH
73
2
HOH
HOH
73
A
HOH
74
2
HOH
HOH
74
A
HOH
75
2
HOH
HOH
75
A
HOH
76
2
HOH
HOH
76
A
HOH
77
2
HOH
HOH
77
A
HOH
78
2
HOH
HOH
78
A
HOH
79
2
HOH
HOH
79
A
HOH
80
2
HOH
HOH
80
A
HOH
81
2
HOH
HOH
81
A
HOH
82
2
HOH
HOH
82
A
HOH
83
2
HOH
HOH
83
A
HOH
84
2
HOH
HOH
84
A
HOH
85
2
HOH
HOH
85
A
HOH
86
2
HOH
HOH
86
A
HOH
87
2
HOH
HOH
87
A
HOH
88
2
HOH
HOH
88
A
HOH
89
2
HOH
HOH
89
A
HOH
90
2
HOH
HOH
90
A
HOH
91
2
HOH
HOH
91
A
HOH
92
2
HOH
HOH
92
A
HOH
93
2
HOH
HOH
93
A
HOH
94
2
HOH
HOH
94
A
HOH
95
2
HOH
HOH
95
A
HOH
96
2
HOH
HOH
96
A
HOH
97
2
HOH
HOH
97
A
HOH
98
2
HOH
HOH
98
A
HOH
99
2
HOH
HOH
99
A
HOH
100
2
HOH
HOH
100
A
HOH
101
2
HOH
HOH
101
A
HOH
102
2
HOH
HOH
102
A
HOH
103
2
HOH
HOH
103
A
HOH
104
2
HOH
HOH
104
A
HOH
105
2
HOH
HOH
105
A
HOH
106
2
HOH
HOH
106
A
HOH
107
2
HOH
HOH
107
A
HOH
108
2
HOH
HOH
108
A
HOH
109
2
HOH
HOH
109
A
HOH
110
2
HOH
HOH
110
A
HOH
111
2
HOH
HOH
111
A
HOH
112
2
HOH
HOH
112
A
HOH
113
2
HOH
HOH
113
A
HOH
114
2
HOH
HOH
114
A
HOH
115
2
HOH
HOH
115
A
HOH
116
2
HOH
HOH
116
A
HOH
117
2
HOH
HOH
117
A
HOH
118
2
HOH
HOH
118
A
HOH
119
2
HOH
HOH
119
A
HOH
120
2
HOH
HOH
120
A
HOH
121
2
HOH
HOH
121
A
HOH
122
2
HOH
HOH
122
A
HOH
123
2
HOH
HOH
123
A
HOH
124
2
HOH
HOH
124
A
HOH
125
2
HOH
HOH
125
A
HOH
126
2
HOH
HOH
126
A
HOH
127
2
HOH
HOH
127
A
HOH
128
2
HOH
HOH
128
A
HOH
129
2
HOH
HOH
129
A
HOH
130
2
HOH
HOH
130
A
HOH
131
2
HOH
HOH
131
A
HOH
132
2
HOH
HOH
132
A
HOH
133
2
HOH
HOH
133
A
HOH
134
2
HOH
HOH
134
A
HOH
135
2
HOH
HOH
135
A
HOH
136
2
HOH
HOH
136
A
HOH
137
2
HOH
HOH
137
A
ILE
1
n
1
ILE
1
A
THR
2
n
2
THR
2
A
CYS
3
n
3
CYS
3
A
TYR
4
n
4
TYR
4
A
LYS
5
n
5
LYS
5
A
THR
6
n
6
THR
6
A
PRO
7
n
7
PRO
7
A
ILE
8
n
8
ILE
8
A
ILE
9
n
9
ILE
9
A
THR
10
n
10
THR
10
A
SER
11
n
11
SER
11
A
GLU
12
n
12
GLU
12
A
THR
13
n
13
THR
13
A
CYS
14
n
14
CYS
14
A
ALA
15
n
15
ALA
15
A
PRO
16
n
16
PRO
16
A
GLY
17
n
17
GLY
17
A
GLN
18
n
18
GLN
18
A
ASN
19
n
19
ASN
19
A
LEU
20
n
20
LEU
20
A
CYS
21
n
21
CYS
21
A
TYR
22
n
22
TYR
22
A
THR
23
n
23
THR
23
A
LYS
24
n
24
LYS
24
A
THR
25
n
25
THR
25
A
TRP
26
n
26
TRP
26
A
CYS
27
n
27
CYS
27
A
ASP
28
n
28
ASP
28
A
ALA
29
n
29
ALA
29
A
TRP
30
n
30
TRP
30
A
CYS
31
n
31
CYS
31
A
GLY
32
n
32
GLY
32
A
SER
33
n
33
SER
33
A
ARG
34
n
34
ARG
34
A
GLY
35
n
35
GLY
35
A
LYS
36
n
36
LYS
36
A
VAL
37
n
37
VAL
37
A
ILE
38
n
38
ILE
38
A
GLU
39
n
39
GLU
39
A
LEU
40
n
40
LEU
40
A
GLY
41
n
41
GLY
41
A
CYS
42
n
42
CYS
42
A
ALA
43
n
43
ALA
43
A
ALA
44
n
44
ALA
44
A
THR
45
n
45
THR
45
A
CYS
46
n
46
CYS
46
A
PRO
47
n
47
PRO
47
A
THR
48
n
48
THR
48
A
VAL
49
n
49
VAL
49
A
GLU
50
n
50
GLU
50
A
SER
51
n
51
SER
51
A
TYR
52
n
52
TYR
52
A
GLN
53
n
53
GLN
53
A
ASP
54
n
54
ASP
54
A
ILE
55
n
55
ILE
55
A
LYS
56
n
56
LYS
56
A
CYS
57
n
57
CYS
57
A
CYS
58
n
58
CYS
58
A
SER
59
n
59
SER
59
A
THR
60
n
60
THR
60
A
ASP
61
n
61
ASP
61
A
ASN
62
n
62
ASN
62
A
CYS
63
n
63
CYS
63
A
ASN
64
n
64
ASN
64
A
PRO
65
n
65
PRO
65
A
HIS
66
n
66
HIS
66
A
PRO
67
n
67
PRO
67
A
LYS
68
n
68
LYS
68
A
GLN
69
n
69
GLN
69
A
LYS
70
n
70
LYS
70
A
ARG
71
n
71
ARG
71
A
PRO
72
n
72
PRO
72
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LYS
5
A
N
LYS
5
A
O
THR
10
A
O
THR
10
A
O
VAL
37
A
O
VAL
37
A
N
TRP
26
A
N
TRP
26
A
O
THR
25
A
O
THR
25
A
N
ASP
54
A
N
ASP
54
1
A
CB
GLN
69
A
CB
GLN
69
1
Y
1
A
CG
GLN
69
A
CG
GLN
69
1
Y
1
A
CD
GLN
69
A
CD
GLN
69
1
Y
1
A
OE1
GLN
69
A
OE1
GLN
69
1
Y
1
A
NE2
GLN
69
A
NE2
GLN
69
1
Y
1
A
CB
LYS
70
A
CB
LYS
70
1
Y
1
A
CG
LYS
70
A
CG
LYS
70
1
Y
1
A
CD
LYS
70
A
CD
LYS
70
1
Y
1
A
CE
LYS
70
A
CE
LYS
70
1
Y
1
A
NZ
LYS
70
A
NZ
LYS
70
1
Y
1
A
CB
ARG
71
A
CB
ARG
71
1
Y
1
A
CG
ARG
71
A
CG
ARG
71
1
Y
1
A
CD
ARG
71
A
CD
ARG
71
1
Y
1
A
NE
ARG
71
A
NE
ARG
71
1
Y
1
A
CZ
ARG
71
A
CZ
ARG
71
1
Y
1
A
NH1
ARG
71
A
NH1
ARG
71
1
Y
1
A
NH2
ARG
71
A
NH2
ARG
71
1
Y
1
-4.51
0.60
121.00
116.49
A
A
A
CB
CG
CD2
TYR
TYR
TYR
4
4
4
N
1
-14.44
1.90
110.30
95.86
A
A
A
N
CA
CB
THR
THR
THR
6
6
6
N
1
15.97
2.20
117.20
133.17
A
A
A
CA
C
N
PRO
PRO
ILE
7
7
8
Y
1
20.49
2.30
110.80
131.29
A
A
A
N
CA
CB
ILE
ILE
ILE
8
8
8
N
1
11.26
1.60
122.70
133.96
A
A
A
O
C
N
ILE
ILE
ILE
8
8
9
Y
1
16.57
2.20
113.40
129.97
A
A
A
CA
CB
CG
GLU
GLU
GLU
12
12
12
N
1
13.14
2.00
118.30
131.44
A
A
A
CG
CD
OE2
GLU
GLU
GLU
12
12
12
N
1
8.72
1.40
123.60
132.32
A
A
A
CD
NE
CZ
ARG
ARG
ARG
34
34
34
N
1
3.26
0.50
120.30
123.56
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
34
34
34
N
1
21.35
2.60
111.60
132.95
A
A
A
CB
CG
CD
LYS
LYS
LYS
36
36
36
N
1
23.66
3.00
111.90
135.56
A
A
A
CG
CD
CE
LYS
LYS
LYS
36
36
36
N
1
12.56
2.00
110.90
123.46
A
A
A
CA
CB
CG2
ILE
ILE
ILE
38
38
38
N
1
13.61
1.90
110.30
123.91
A
A
A
N
CA
CB
THR
THR
THR
48
48
48
N
1
12.06
2.00
118.30
130.36
A
A
A
CG
CD
OE2
GLU
GLU
GLU
50
50
50
N
1
3.72
0.60
121.00
124.72
A
A
A
CB
CG
CD2
TYR
TYR
TYR
52
52
52
N
1
-6.78
0.60
121.00
114.22
A
A
A
CB
CG
CD1
TYR
TYR
TYR
52
52
52
N
1
-9.85
1.50
110.50
100.65
A
A
A
N
CA
CB
SER
SER
SER
59
59
59
N
1
10.98
1.60
122.70
133.68
A
A
A
O
C
N
THR
THR
ASP
60
60
61
Y
1
-5.81
0.90
118.30
112.49
A
A
A
CB
CG
OD1
ASP
ASP
ASP
61
61
61
N
1
7.63
0.90
118.30
125.93
A
A
A
CB
CG
OD2
ASP
ASP
ASP
61
61
61
N
1
28.07
2.70
111.00
139.07
A
A
A
N
CA
C
GLN
GLN
GLN
69
69
69
N
1
A
A
CB
CG
ASP
PRO
28
72
2.10
1_555
1_455
1
A
ILE
9
-20.66
123.07
1
A
PRO
67
-77.23
21.28
1
A
GLN
69
-53.57
-108.88
1
A
LYS
70
-176.88
115.05
1
A
ARG
71
-177.60
-112.31
RESIDUES 69 - 71 ARE POORLY DEFINED IN THE ELECTRON-DENSITY MAP AND IN REFINEMENT
0.19
1.9
38.0
4979
1
1.
1.9
38.0
65
599
0
0
534
0.020
0.014
0.030
0.056
0.040
0.062
0.020
0.018
0.200
0.227
0.300
0.214
0.300
0.324
0.300
0.216
3.0
3.3
20.0
25.7
20.0
11.5
refinement
PROLSQ
NEUROTOXIN-I
THE CRYSTAL STRUCTURE OF NEUROTOXIN-I FROM NAJA NAJA OXIANA AT 1.9 ANGSTROMS RESOLUTION
1
N
N
2
N
N
A
TRP
30
A
TRP
30
HELX_P
A
GLY
35
A
GLY
35
1
1
6
disulf
2.066
A
CYS
3
A
SG
CYS
3
1_555
A
CYS
21
A
SG
CYS
21
1_555
disulf
1.994
A
CYS
14
A
SG
CYS
14
1_555
A
CYS
42
A
SG
CYS
42
1_555
disulf
2.069
A
CYS
27
A
SG
CYS
27
1_555
A
CYS
31
A
SG
CYS
31
1_555
disulf
2.051
A
CYS
46
A
SG
CYS
46
1_555
A
CYS
57
A
SG
CYS
57
1_555
disulf
2.050
A
CYS
58
A
SG
CYS
58
1_555
A
CYS
63
A
SG
CYS
63
1_555
POSTSYNAPTIC NEUROTOXIN
POSTSYNAPTIC NEUROTOXIN
A
THR
6
A
THR
6
1
A
PRO
7
A
PRO
7
2.12
NXL1_NAJOX
UNP
1
1
P01382
ITCYKTPIPITSETCAPGQNLCYTKTWCDAWCGSRGKVIELGCAATCPTVESYQDIKCCSTDDCNPHPKQKRP
1
73
1NTN
1
72
P01382
A
1
1
72
1
PRO
DELETION
1NTN
A
P01382
UNP
9
1
ASP
CONFLICT
ASN
62
1NTN
A
P01382
UNP
63
62
2
3
anti-parallel
anti-parallel
anti-parallel
A
THR
2
A
THR
2
A
LYS
5
A
LYS
5
A
THR
10
A
THR
10
A
THR
13
A
THR
13
A
VAL
37
A
VAL
37
A
ALA
43
A
ALA
43
A
LEU
20
A
LEU
20
A
TRP
26
A
TRP
26
A
GLN
53
A
GLN
53
A
CYS
58
A
CYS
58
19
P 21 21 21