0.00 7.575 -4.433 12.055 A O5' A 2 ATOM A O5' A 1 1 1.00 1 O 0.00 7.904 -5.000 13.324 A C5' A 2 ATOM A C5' A 1 1 1.00 1 C 0.00 6.998 -6.190 13.711 A C4' A 2 ATOM A C4' A 1 1 1.00 1 C 0.00 5.770 -5.764 14.321 A O4' A 2 ATOM A O4' A 1 1 1.00 1 O 0.00 6.544 -7.083 12.554 A C3' A 2 ATOM A C3' A 1 1 1.00 1 C 0.00 7.605 -7.940 12.097 A O3' A 2 ATOM A O3' A 1 1 1.00 1 O 0.00 5.356 -7.831 13.146 A C2' A 2 ATOM A C2' A 1 1 1.00 1 C 0.00 5.815 -8.970 13.871 A O2' A 2 ATOM A O2' A 1 1 1.00 1 O 0.00 4.750 -6.776 14.103 A C1' A 2 ATOM A C1' A 1 1 1.00 1 C 0.00 3.494 -6.147 13.571 A N9 A 2 ATOM A N9 A 1 1 1.00 1 N 0.00 3.170 -4.802 13.407 A C8 A 2 ATOM A C8 A 1 1 1.00 1 C 0.00 1.883 -4.378 13.154 A N7 A 2 ATOM A N7 A 1 1 1.00 1 N 0.00 1.281 -5.629 13.133 A C5 A 2 ATOM A C5 A 1 1 1.00 1 C 0.00 -0.107 -5.992 12.928 A C6 A 2 ATOM A C6 A 1 1 1.00 1 C 0.00 -1.051 -5.077 12.736 A N6 A 2 ATOM A N6 A 1 1 1.00 1 N 0.00 -0.470 -7.260 12.930 A N1 A 2 ATOM A N1 A 1 1 1.00 1 N 0.00 0.429 -8.201 13.126 A C2 A 2 ATOM A C2 A 1 1 1.00 1 C 0.00 1.714 -8.082 13.345 A N3 A 2 ATOM A N3 A 1 1 1.00 1 N 0.00 2.234 -6.712 13.362 A C4 A 2 ATOM A C4 A 1 1 1.00 1 C 0.00 7.866 -4.219 14.105 A H5' A 2 ATOM A H5' A 1 1 1.00 1 H 0.00 8.957 -5.339 13.287 A H5'' A 2 ATOM A H5'' A 1 1 1.00 1 H 0.00 7.546 -6.804 14.452 A H4' A 2 ATOM A H4' A 1 1 1.00 1 H 0.00 6.157 -6.447 11.734 A H3' A 2 ATOM A H3' A 1 1 1.00 1 H 0.00 4.660 -8.165 12.353 A H2' A 2 ATOM A H2' A 1 1 1.00 1 H 0.00 6.584 -9.274 13.378 A HO2' A 2 ATOM A HO2' A 1 1 1.00 1 H 0.00 4.515 -7.255 15.070 A H1' A 2 ATOM A H1' A 1 1 1.00 1 H 0.00 3.946 -4.056 13.507 A H8 A 2 ATOM A H8 A 1 1 1.00 1 H 0.00 -2.002 -5.431 12.592 A H61 A 2 ATOM A H61 A 1 1 1.00 1 H 0.00 -0.742 -4.098 12.718 A H62 A 2 ATOM A H62 A 1 1 1.00 1 H 0.00 0.055 -9.214 13.100 A H2 A 2 ATOM A H2 A 1 1 1.00 1 H 0.00 7.876 -5.075 11.379 A HO5' A 2 ATOM A HO5' A 1 1 1.00 1 H 0.00 8.242 -7.732 10.625 A P A 3 ATOM A P A 1 2 1.00 1 P 0.00 9.614 -8.403 10.561 A OP1 A 3 ATOM A OP1 A 1 2 1.00 1 O 0.00 8.382 -6.227 10.359 A OP2 A 3 ATOM A OP2 A 1 2 1.00 1 O 0.00 7.237 -8.396 9.548 A O5' A 3 ATOM A O5' A 1 2 1.00 1 O 0.00 7.087 -9.825 9.431 A C5' A 3 ATOM A C5' A 1 2 1.00 1 C 0.00 5.656 -10.211 9.022 A C4' A 3 ATOM A C4' A 1 2 1.00 1 C 0.00 4.723 -9.712 10.004 A O4' A 3 ATOM A O4' A 1 2 1.00 1 O 0.00 5.172 -9.676 7.667 A C3' A 3 ATOM A C3' A 1 2 1.00 1 C 0.00 5.617 -10.501 6.571 A O3' A 3 ATOM A O3' A 1 2 1.00 1 O 0.00 3.650 -9.679 7.863 A C2' A 3 ATOM A C2' A 1 2 1.00 1 C 0.00 3.086 -10.961 7.592 A O2' A 3 ATOM A O2' A 1 2 1.00 1 O 0.00 3.485 -9.349 9.359 A C1' A 3 ATOM A C1' A 1 2 1.00 1 C 0.00 3.176 -7.899 9.569 A N9 A 3 ATOM A N9 A 1 2 1.00 1 N 0.00 4.018 -6.803 9.720 A C8 A 3 ATOM A C8 A 1 2 1.00 1 C 0.00 3.543 -5.510 9.746 A N7 A 3 ATOM A N7 A 1 2 1.00 1 N 0.00 2.198 -5.811 9.582 A C5 A 3 ATOM A C5 A 1 2 1.00 1 C 0.00 1.049 -4.934 9.505 A C6 A 3 ATOM A C6 A 1 2 1.00 1 C 0.00 1.164 -3.615 9.603 A N6 A 3 ATOM A N6 A 1 2 1.00 1 N 0.00 -0.158 -5.438 9.347 A N1 A 3 ATOM A N1 A 1 2 1.00 1 N 0.00 -0.327 -6.740 9.260 A C2 A 3 ATOM A C2 A 1 2 1.00 1 C 0.00 0.569 -7.690 9.305 A N3 A 3 ATOM A N3 A 1 2 1.00 1 N 0.00 1.953 -7.246 9.482 A C4 A 3 ATOM A C4 A 1 2 1.00 1 C 0.00 7.334 -10.322 10.389 A H5' A 3 ATOM A H5' A 1 2 1.00 1 H 0.00 7.814 -10.212 8.692 A H5'' A 3 ATOM A H5'' A 1 2 1.00 1 H 0.00 5.584 -11.316 9.011 A H4' A 3 ATOM A H4' A 1 2 1.00 1 H 0.00 5.524 -8.634 7.530 A H3' A 3 ATOM A H3' A 1 2 1.00 1 H 0.00 3.167 -8.936 7.202 A H2' A 3 ATOM A H2' A 1 2 1.00 1 H 0.00 2.834 -10.938 6.662 A HO2' A 3 ATOM A HO2' A 1 2 1.00 1 H 0.00 2.667 -9.954 9.795 A H1' A 3 ATOM A H1' A 1 2 1.00 1 H 0.00 5.081 -6.967 9.813 A H8 A 3 ATOM A H8 A 1 2 1.00 1 H 0.00 0.296 -3.070 9.538 A H61 A 3 ATOM A H61 A 1 2 1.00 1 H 0.00 2.114 -3.248 9.725 A H62 A 3 ATOM A H62 A 1 2 1.00 1 H 0.00 -1.347 -7.068 9.121 A H2 A 3 ATOM A H2 A 1 2 1.00 1 H 0.00 5.492 -10.037 5.021 A P A 4 ATOM A P A 1 3 1.00 1 P 0.00 6.310 -10.988 4.145 A OP1 A 4 ATOM A OP1 A 1 3 1.00 1 O 0.00 6.029 -8.613 4.868 A OP2 A 4 ATOM A OP2 A 1 3 1.00 1 O 0.00 3.938 -10.075 4.564 A O5' A 4 ATOM A O5' A 1 3 1.00 1 O 0.00 3.230 -11.309 4.344 A C5' A 4 ATOM A C5' A 1 3 1.00 1 C 0.00 1.706 -11.092 4.356 A C4' A 4 ATOM A C4' A 1 3 1.00 1 C 0.00 1.297 -10.337 5.519 A O4' A 4 ATOM A O4' A 1 3 1.00 1 O 0.00 1.140 -10.328 3.149 A C3' A 4 ATOM A C3' A 1 3 1.00 1 C 0.00 0.948 -11.177 2.000 A O3' A 4 ATOM A O3' A 1 3 1.00 1 O 0.00 -0.185 -9.817 3.722 A C2' A 4 ATOM A C2' A 1 3 1.00 1 C 0.00 -1.171 -10.847 3.677 A O2' A 4 ATOM A O2' A 1 3 1.00 1 O 0.00 0.169 -9.494 5.182 A C1' A 4 ATOM A C1' A 1 3 1.00 1 C 0.00 0.491 -8.042 5.378 A N9 A 4 ATOM A N9 A 1 3 1.00 1 N 0.00 1.700 -7.356 5.301 A C8 A 4 ATOM A C8 A 1 3 1.00 1 C 0.00 1.785 -5.995 5.498 A N7 A 4 ATOM A N7 A 1 3 1.00 1 N 0.00 0.434 -5.758 5.714 A C5 A 4 ATOM A C5 A 1 3 1.00 1 C 0.00 -0.264 -4.518 5.986 A C6 A 4 ATOM A C6 A 1 3 1.00 1 C 0.00 0.379 -3.360 6.071 A N6 A 4 ATOM A N6 A 1 3 1.00 1 N 0.00 -1.571 -4.514 6.163 A N1 A 4 ATOM A N1 A 1 3 1.00 1 N 0.00 -2.249 -5.638 6.085 A C2 A 4 ATOM A C2 A 1 3 1.00 1 C 0.00 -1.812 -6.849 5.851 A N3 A 4 ATOM A N3 A 1 3 1.00 1 N 0.00 -0.366 -6.976 5.645 A C4 A 4 ATOM A C4 A 1 3 1.00 1 C 0.00 3.502 -12.044 5.124 A H5' A 4 ATOM A H5' A 1 3 1.00 1 H 0.00 3.550 -11.758 3.384 A H5'' A 4 ATOM A H5'' A 1 3 1.00 1 H 0.00 1.221 -12.087 4.399 A H4' A 4 ATOM A H4' A 1 3 1.00 1 H 0.00 1.801 -9.473 2.900 A H3' A 4 ATOM A H3' A 1 3 1.00 1 H 0.00 -0.559 -8.945 3.163 A H2' A 4 ATOM A H2' A 1 3 1.00 1 H 0.00 -1.004 -11.306 2.848 A HO2' A 4 ATOM A HO2' A 1 3 1.00 1 H 0.00 -0.691 -9.751 5.825 A H1' A 4 ATOM A H1' A 1 3 1.00 1 H 0.00 2.604 -7.898 5.059 A H8 A 4 ATOM A H8 A 1 3 1.00 1 H 0.00 -0.198 -2.533 6.278 A H61 A 4 ATOM A H61 A 1 3 1.00 1 H 0.00 1.393 -3.386 5.922 A H62 A 4 ATOM A H62 A 1 3 1.00 1 H 0.00 -3.315 -5.549 6.235 A H2 A 4 ATOM A H2 A 1 3 1.00 1 H 0.00 0.753 -10.577 0.504 A P G 5 ATOM A P G 1 4 1.00 1 P 0.00 0.746 -11.732 -0.498 A OP1 G 5 ATOM A OP1 G 1 4 1.00 1 O 0.00 1.905 -9.626 0.182 A OP2 G 5 ATOM A OP2 G 1 4 1.00 1 O 0.00 -0.652 -9.771 0.421 A O5' G 5 ATOM A O5' G 1 4 1.00 1 O 0.00 -1.922 -10.449 0.380 A C5' G 5 ATOM A C5' G 1 4 1.00 1 C 0.00 -3.093 -9.502 0.698 A C4' G 5 ATOM A C4' G 1 4 1.00 1 C 0.00 -2.879 -8.798 1.939 A O4' G 5 ATOM A O4' G 1 4 1.00 1 O 0.00 -3.363 -8.415 -0.351 A C3' G 5 ATOM A C3' G 1 4 1.00 1 C 0.00 -4.116 -8.926 -1.470 A O3' G 5 ATOM A O3' G 1 4 1.00 1 O 0.00 -4.150 -7.393 0.475 A C2' G 5 ATOM A C2' G 1 4 1.00 1 C 0.00 -5.522 -7.774 0.551 A O2' G 5 ATOM A O2' G 1 4 1.00 1 O 0.00 -3.497 -7.492 1.869 A C1' G 5 ATOM A C1' G 1 4 1.00 1 C 0.00 -2.489 -6.402 2.090 A N9 G 5 ATOM A N9 G 1 4 1.00 1 N 0.00 -1.104 -6.401 1.975 A C8 G 5 ATOM A C8 G 1 4 1.00 1 C 0.00 -0.359 -5.264 2.194 A N7 G 5 ATOM A N7 G 1 4 1.00 1 N 0.00 -1.413 -4.420 2.485 A C5 G 5 ATOM A C5 G 1 4 1.00 1 C 0.00 -1.328 -2.918 2.866 A C6 G 5 ATOM A C6 G 1 4 1.00 1 C 0.00 -0.274 -2.292 2.952 A O6 G 5 ATOM A O6 G 1 4 1.00 1 O 0.00 -2.524 -2.315 3.107 A N1 G 5 ATOM A N1 G 1 4 1.00 1 N 0.00 -3.809 -3.012 2.996 A C2 G 5 ATOM A C2 G 1 4 1.00 1 C 0.00 -4.989 -2.297 3.183 A N2 G 5 ATOM A N2 G 1 4 1.00 1 N 0.00 -3.865 -4.270 2.709 A N3 G 5 ATOM A N3 G 1 4 1.00 1 N 0.00 -2.693 -5.069 2.429 A C4 G 5 ATOM A C4 G 1 4 1.00 1 C 0.00 -1.928 -11.285 1.104 A H5' G 5 ATOM A H5' G 1 4 1.00 1 H 0.00 -2.064 -10.913 -0.615 A H5'' G 5 ATOM A H5'' G 1 4 1.00 1 H 0.00 -4.006 -10.119 0.806 A H4' G 5 ATOM A H4' G 1 4 1.00 1 H 0.00 -2.403 -7.971 -0.688 A H3' G 5 ATOM A H3' G 1 4 1.00 1 H 0.00 -4.088 -6.383 0.031 A H2' G 5 ATOM A H2' G 1 4 1.00 1 H 0.00 -5.717 -8.149 -0.313 A HO2' G 5 ATOM A HO2' G 1 4 1.00 1 H 0.00 -4.272 -7.421 2.656 A H1' G 5 ATOM A H1' G 1 4 1.00 1 H 0.00 -0.589 -7.320 1.732 A H8 G 5 ATOM A H8 G 1 4 1.00 1 H 0.00 -2.464 -1.318 3.340 A H1 G 5 ATOM A H1 G 1 4 1.00 1 H 0.00 -4.931 -1.293 3.390 A H21 G 5 ATOM A H21 G 1 4 1.00 1 H 0.00 -5.877 -2.802 3.110 A H22 G 5 ATOM A H22 G 1 4 1.00 1 H 0.00 -4.147 -8.188 -2.914 A P G 6 ATOM A P G 1 5 1.00 1 P 0.00 -4.819 -9.113 -3.931 A OP1 G 6 ATOM A OP1 G 1 5 1.00 1 O 0.00 -2.719 -7.882 -3.367 A OP2 G 6 ATOM A OP2 G 1 5 1.00 1 O 0.00 -4.983 -6.807 -2.799 A O5' G 6 ATOM A O5' G 1 5 1.00 1 O 0.00 -6.415 -6.787 -2.659 A C5' G 6 ATOM A C5' G 1 5 1.00 1 C 0.00 -6.923 -5.411 -2.196 A C4' G 6 ATOM A C4' G 1 5 1.00 1 C 0.00 -6.254 -4.988 -0.985 A O4' G 6 ATOM A O4' G 1 5 1.00 1 O 0.00 -6.731 -4.265 -3.201 A C3' G 6 ATOM A C3' G 1 5 1.00 1 C 0.00 -7.767 -4.231 -4.203 A O3' G 6 ATOM A O3' G 1 5 1.00 1 O 0.00 -6.790 -3.052 -2.272 A C2' G 6 ATOM A C2' G 1 5 1.00 1 C 0.00 -8.149 -2.733 -1.972 A O2' G 6 ATOM A O2' G 1 5 1.00 1 O 0.00 -6.072 -3.552 -1.011 A C1' G 6 ATOM A C1' G 1 5 1.00 1 C 0.00 -4.617 -3.186 -0.986 A N9 G 6 ATOM A N9 G 1 5 1.00 1 N 0.00 -3.481 -3.924 -1.300 A C8 G 6 ATOM A C8 G 1 5 1.00 1 C 0.00 -2.214 -3.430 -1.089 A N7 G 6 ATOM A N7 G 1 5 1.00 1 N 0.00 -2.590 -2.197 -0.594 A C5 G 6 ATOM A C5 G 1 5 1.00 1 C 0.00 -1.652 -1.051 -0.133 A C6 G 6 ATOM A C6 G 1 5 1.00 1 C 0.00 -0.426 -1.132 -0.133 A O6 G 6 ATOM A O6 G 1 5 1.00 1 O 0.00 -2.284 0.081 0.284 A N1 G 6 ATOM A N1 G 1 5 1.00 1 N 0.00 -3.742 0.231 0.282 A C2 G 6 ATOM A C2 G 1 5 1.00 1 C 0.00 -4.303 1.456 0.636 A N2 G 6 ATOM A N2 G 1 5 1.00 1 N 0.00 -4.513 -0.744 -0.069 A N3 G 6 ATOM A N3 G 1 5 1.00 1 N 0.00 -4.014 -2.017 -0.537 A C4 G 6 ATOM A C4 G 1 5 1.00 1 C 0.00 -6.735 -7.555 -1.930 A H5' G 6 ATOM A H5' G 1 5 1.00 1 H 0.00 -6.887 -7.067 -3.620 A H5'' G 6 ATOM A H5'' G 1 5 1.00 1 H 0.00 -8.004 -5.507 -1.973 A H4' G 6 ATOM A H4' G 1 5 1.00 1 H 0.00 -5.728 -4.336 -3.671 A H3' G 6 ATOM A H3' G 1 5 1.00 1 H 0.00 -6.316 -2.164 -2.712 A H2' G 6 ATOM A H2' G 1 5 1.00 1 H 0.00 -8.633 -2.973 -2.768 A HO2' G 6 ATOM A HO2' G 1 5 1.00 1 H 0.00 -6.556 -3.094 -0.133 A H1' G 6 ATOM A H1' G 1 5 1.00 1 H 0.00 -3.587 -4.911 -1.727 A H8 G 6 ATOM A H8 G 1 5 1.00 1 H 0.00 -1.659 0.848 0.553 A H1 G 6 ATOM A H1 G 1 5 1.00 1 H 0.00 -3.676 2.232 0.876 A H21 G 6 ATOM A H21 G 1 5 1.00 1 H 0.00 -5.323 1.543 0.620 A H22 G 6 ATOM A H22 G 1 5 1.00 1 H 0.00 -7.575 -3.453 -5.615 A P A 7 ATOM A P A 1 6 1.00 1 P 0.00 -8.807 -3.698 -6.489 A OP1 A 7 ATOM A OP1 A 1 6 1.00 1 O 0.00 -6.331 -3.985 -6.326 A OP2 A 7 ATOM A OP2 A 1 6 1.00 1 O 0.00 -7.403 -1.863 -5.344 A O5' A 7 ATOM A O5' A 1 6 1.00 1 O 0.00 -8.516 -1.021 -4.989 A C5' A 7 ATOM A C5' A 1 6 1.00 1 C 0.00 -8.058 0.353 -4.468 A C4' A 7 ATOM A C4' A 1 6 1.00 1 C 0.00 -7.162 0.214 -3.344 A O4' A 7 ATOM A O4' A 1 6 1.00 1 O 0.00 -7.315 1.232 -5.485 A C3' A 7 ATOM A C3' A 1 6 1.00 1 C 0.00 -8.220 1.924 -6.370 A O3' A 7 ATOM A O3' A 1 6 1.00 1 O 0.00 -6.560 2.186 -4.554 A C2' A 7 ATOM A C2' A 1 6 1.00 1 C 0.00 -7.423 3.238 -4.124 A O2' A 7 ATOM A O2' A 1 6 1.00 1 O 0.00 -6.188 1.284 -3.362 A C1' A 7 ATOM A C1' A 1 6 1.00 1 C 0.00 -4.793 0.746 -3.481 A N9 A 7 ATOM A N9 A 1 6 1.00 1 N 0.00 -4.327 -0.502 -3.885 A C8 A 7 ATOM A C8 A 1 6 1.00 1 C 0.00 -2.985 -0.812 -3.911 A N7 A 7 ATOM A N7 A 1 6 1.00 1 N 0.00 -2.509 0.408 -3.450 A C5 A 7 ATOM A C5 A 1 6 1.00 1 C 0.00 -1.154 0.829 -3.164 A C6 A 7 ATOM A C6 A 1 6 1.00 1 C 0.00 -0.119 0.017 -3.344 A N6 A 7 ATOM A N6 A 1 6 1.00 1 N 0.00 -0.921 2.040 -2.696 A N1 A 7 ATOM A N1 A 1 6 1.00 1 N 0.00 -1.918 2.874 -2.494 A C2 A 7 ATOM A C2 A 1 6 1.00 1 C 0.00 -3.199 2.684 -2.677 A N3 A 7 ATOM A N3 A 1 6 1.00 1 N 0.00 -3.580 1.363 -3.186 A C4 A 7 ATOM A C4 A 1 6 1.00 1 C 0.00 -9.132 -1.515 -4.215 A H5' A 7 ATOM A H5' A 1 6 1.00 1 H 0.00 -9.178 -0.893 -5.867 A H5'' A 7 ATOM A H5'' A 1 6 1.00 1 H 0.00 -8.958 0.899 -4.122 A H4' A 7 ATOM A H4' A 1 6 1.00 1 H 0.00 -6.594 0.615 -6.059 A H3' A 7 ATOM A H3' A 1 6 1.00 1 H 0.00 -5.684 2.632 -5.053 A H2' A 7 ATOM A H2' A 1 6 1.00 1 H 0.00 -7.987 3.413 -4.883 A HO2' A 7 ATOM A HO2' A 1 6 1.00 1 H 0.00 -6.264 1.861 -2.422 A H1' A 7 ATOM A H1' A 1 6 1.00 1 H 0.00 -5.036 -1.284 -4.118 A H8 A 7 ATOM A H8 A 1 6 1.00 1 H 0.00 0.808 0.368 -3.075 A H61 A 7 ATOM A H61 A 1 6 1.00 1 H 0.00 -0.339 -0.925 -3.688 A H62 A 7 ATOM A H62 A 1 6 1.00 1 H 0.00 -1.640 3.859 -2.146 A H2 A 7 ATOM A H2 A 1 6 1.00 1 H 0.00 -7.744 2.530 -7.799 A P G 8 ATOM A P G 1 7 1.00 1 P 0.00 -8.977 2.995 -8.577 A OP1 G 8 ATOM A OP1 G 1 7 1.00 1 O 0.00 -7.013 1.452 -8.598 A OP2 G 8 ATOM A OP2 G 1 7 1.00 1 O 0.00 -6.750 3.785 -7.552 A O5' G 8 ATOM A O5' G 1 7 1.00 1 O 0.00 -7.231 5.065 -7.102 A C5' G 8 ATOM A C5' G 1 7 1.00 1 C 0.00 -6.086 5.968 -6.613 A C4' G 8 ATOM A C4' G 1 7 1.00 1 C 0.00 -5.303 5.308 -5.595 A O4' G 8 ATOM A O4' G 1 7 1.00 1 O 0.00 -5.082 6.406 -7.690 A C3' G 8 ATOM A C3' G 1 7 1.00 1 C 0.00 -5.563 7.526 -8.462 A O3' G 8 ATOM A O3' G 1 7 1.00 1 O 0.00 -3.868 6.769 -6.831 A C2' G 8 ATOM A C2' G 1 7 1.00 1 C 0.00 -4.022 8.082 -6.296 A O2' G 8 ATOM A O2' G 1 7 1.00 1 O 0.00 -3.921 5.722 -5.701 A C1' G 8 ATOM A C1' G 1 7 1.00 1 C 0.00 -3.026 4.551 -5.980 A N9 G 8 ATOM A N9 G 1 7 1.00 1 N 0.00 -3.306 3.281 -6.470 A C8 G 8 ATOM A C8 G 1 7 1.00 1 C 0.00 -2.326 2.324 -6.607 A N7 G 8 ATOM A N7 G 1 7 1.00 1 N 0.00 -1.271 3.095 -6.163 A C5 G 8 ATOM A C5 G 1 7 1.00 1 C 0.00 0.215 2.667 -6.056 A C6 G 8 ATOM A C6 G 1 7 1.00 1 C 0.00 0.622 1.541 -6.334 A O6 G 8 ATOM A O6 G 1 7 1.00 1 O 0.00 1.069 3.641 -5.639 A N1 G 8 ATOM A N1 G 1 7 1.00 1 N 0.00 0.636 5.007 -5.328 A C2 G 8 ATOM A C2 G 1 7 1.00 1 C 0.00 1.592 5.970 -5.010 A N2 G 8 ATOM A N2 G 1 7 1.00 1 N 0.00 -0.611 5.339 -5.375 A N3 G 8 ATOM A N3 G 1 7 1.00 1 N 0.00 -1.654 4.430 -5.799 A C4 G 8 ATOM A C4 G 1 7 1.00 1 C 0.00 -7.958 4.926 -6.280 A H5' G 8 ATOM A H5' G 1 7 1.00 1 H 0.00 -7.788 5.562 -7.919 A H5'' G 8 ATOM A H5'' G 1 7 1.00 1 H 0.00 -6.538 6.874 -6.164 A H4' G 8 ATOM A H4' G 1 7 1.00 1 H 0.00 -4.837 5.546 -8.348 A H3' G 8 ATOM A H3' G 1 7 1.00 1 H 0.00 -2.931 6.735 -7.411 A H2' G 8 ATOM A H2' G 1 7 1.00 1 H 0.00 -4.519 8.559 -6.968 A HO2' G 8 ATOM A HO2' G 1 7 1.00 1 H 0.00 -3.606 6.183 -4.745 A H1' G 8 ATOM A H1' G 1 7 1.00 1 H 0.00 -4.318 3.029 -6.756 A H8 G 8 ATOM A H8 G 1 7 1.00 1 H 0.00 2.056 3.365 -5.602 A H1 G 8 ATOM A H1 G 1 7 1.00 1 H 0.00 2.581 5.696 -4.989 A H21 G 8 ATOM A H21 G 1 7 1.00 1 H 0.00 1.269 6.916 -4.787 A H22 G 8 ATOM A H22 G 1 7 1.00 1 H 0.00 -5.026 7.848 -9.959 A P G 9 ATOM A P G 1 8 1.00 1 P 0.00 -5.875 8.970 -10.563 A OP1 G 9 ATOM A OP1 G 1 8 1.00 1 O 0.00 -5.143 6.597 -10.829 A OP2 G 9 ATOM A OP2 G 1 8 1.00 1 O 0.00 -3.475 8.314 -9.897 A O5' G 9 ATOM A O5' G 1 8 1.00 1 O 0.00 -3.081 9.609 -9.409 A C5' G 9 ATOM A C5' G 1 8 1.00 1 C 0.00 -1.576 9.663 -9.094 A C4' G 9 ATOM A C4' G 1 8 1.00 1 C 0.00 -1.211 8.611 -8.174 A O4' G 9 ATOM A O4' G 1 8 1.00 1 O 0.00 -0.636 9.510 -10.302 A C3' G 9 ATOM A C3' G 1 8 1.00 1 C 0.00 -0.424 10.755 -11.000 A O3' G 9 ATOM A O3' G 1 8 1.00 1 O 0.00 0.643 9.018 -9.621 A C2' G 9 ATOM A C2' G 1 8 1.00 1 C 0.00 1.359 10.126 -9.077 A O2' G 9 ATOM A O2' G 1 8 1.00 1 O 0.00 0.114 8.127 -8.487 A C1' G 9 ATOM A C1' G 1 8 1.00 1 C 0.00 0.091 6.678 -8.868 A N9 G 9 ATOM A N9 G 1 8 1.00 1 N 0.00 -0.956 5.843 -9.241 A C8 G 9 ATOM A C8 G 1 8 1.00 1 C 0.00 -0.768 4.497 -9.458 A N7 G 9 ATOM A N7 G 1 8 1.00 1 N 0.00 0.590 4.472 -9.205 A C5 G 9 ATOM A C5 G 1 8 1.00 1 C 0.00 1.527 3.241 -9.277 A C6 G 9 ATOM A C6 G 1 8 1.00 1 C 0.00 1.141 2.105 -9.540 A O6 G 9 ATOM A O6 G 1 8 1.00 1 O 0.00 2.842 3.497 -9.038 A N1 G 9 ATOM A N1 G 1 8 1.00 1 N 0.00 3.356 4.844 -8.770 A C2 G 9 ATOM A C2 G 1 8 1.00 1 C 0.00 4.733 5.042 -8.681 A N2 G 9 ATOM A N2 G 1 8 1.00 1 N 0.00 2.559 5.853 -8.659 A N3 G 9 ATOM A N3 G 1 8 1.00 1 N 0.00 1.132 5.758 -8.875 A C4 G 9 ATOM A C4 G 1 8 1.00 1 C 0.00 -3.650 9.856 -8.494 A H5' G 9 ATOM A H5' G 1 8 1.00 1 H 0.00 -3.346 10.384 -10.153 A H5'' G 9 ATOM A H5'' G 1 8 1.00 1 H 0.00 -1.366 10.634 -8.605 A H4' G 9 ATOM A H4' G 1 8 1.00 1 H 0.00 -1.025 8.730 -10.989 A H3' G 9 ATOM A H3' G 1 8 1.00 1 H 0.00 1.302 8.481 -10.323 A H2' G 9 ATOM A H2' G 1 8 1.00 1 H 0.00 1.077 10.877 -9.609 A HO2' G 9 ATOM A HO2' G 1 8 1.00 1 H 0.00 0.764 8.243 -7.603 A H1' G 9 ATOM A H1' G 1 8 1.00 1 H 0.00 -1.949 6.251 -9.362 A H8 G 9 ATOM A H8 G 1 8 1.00 1 H 0.00 3.461 2.685 -9.117 A H1 G 9 ATOM A H1 G 1 8 1.00 1 H 0.00 5.360 4.240 -8.810 A H21 G 9 ATOM A H21 G 1 8 1.00 1 H 0.00 5.067 5.989 -8.484 A H22 G 9 ATOM A H22 G 1 8 1.00 1 H 0.00 0.098 10.809 -12.537 A P A 10 ATOM A P A 1 9 1.00 1 P 0.00 0.234 12.270 -12.971 A OP1 A 10 ATOM A OP1 A 1 9 1.00 1 O 0.00 -0.908 10.100 -13.443 A OP2 A 10 ATOM A OP2 A 1 9 1.00 1 O 0.00 1.535 10.070 -12.661 A O5' A 10 ATOM A O5' A 1 9 1.00 1 O 0.00 2.763 10.668 -12.201 A C5' A 10 ATOM A C5' A 1 9 1.00 1 C 0.00 3.922 9.654 -12.210 A C4' A 10 ATOM A C4' A 1 9 1.00 1 C 0.00 3.608 8.513 -11.389 A O4' A 10 ATOM A O4' A 1 9 1.00 1 O 0.00 4.276 9.088 -13.592 A C3' A 10 ATOM A C3' A 1 9 1.00 1 C 0.00 5.170 9.933 -14.307 A O3' A 10 ATOM A O3' A 1 9 1.00 1 O 0.00 4.922 7.744 -13.247 A C2' A 10 ATOM A C2' A 1 9 1.00 1 C 0.00 6.312 7.910 -12.957 A O2' A 10 ATOM A O2' A 1 9 1.00 1 O 0.00 4.165 7.314 -11.970 A C1' A 10 ATOM A C1' A 1 9 1.00 1 C 0.00 3.091 6.312 -12.265 A N9 A 10 ATOM A N9 A 1 9 1.00 1 N 0.00 1.717 6.470 -12.435 A C8 A 10 ATOM A C8 A 1 9 1.00 1 C 0.00 0.886 5.404 -12.703 A N7 A 10 ATOM A N7 A 1 9 1.00 1 N 0.00 1.855 4.408 -12.691 A C5 A 10 ATOM A C5 A 1 9 1.00 1 C 0.00 1.720 2.973 -12.842 A C6 A 10 ATOM A C6 A 1 9 1.00 1 C 0.00 0.541 2.400 -13.050 A N6 A 10 ATOM A N6 A 1 9 1.00 1 N 0.00 2.778 2.190 -12.747 A N1 A 10 ATOM A N1 A 1 9 1.00 1 N 0.00 3.962 2.713 -12.510 A C2 A 10 ATOM A C2 A 1 9 1.00 1 C 0.00 4.292 3.968 -12.344 A N3 A 10 ATOM A N3 A 1 9 1.00 1 N 0.00 3.190 4.932 -12.424 A C4 A 10 ATOM A C4 A 1 9 1.00 1 C 0.00 2.631 11.064 -11.177 A H5' A 10 ATOM A H5' A 1 9 1.00 1 H 0.00 3.012 11.540 -12.835 A H5'' A 10 ATOM A H5'' A 1 9 1.00 1 H 0.00 4.816 10.145 -11.779 A H4' A 10 ATOM A H4' A 1 9 1.00 1 H 0.00 3.357 8.918 -14.187 A H3' A 10 ATOM A H3' A 1 9 1.00 1 H 0.00 6.039 9.725 -13.951 A HO3' A 10 ATOM A HO3' A 1 9 1.00 1 H 0.00 4.813 7.026 -14.082 A H2' A 10 ATOM A H2' A 1 9 1.00 1 H 0.00 6.640 7.044 -12.702 A HO2' A 10 ATOM A HO2' A 1 9 1.00 1 H 0.00 4.869 6.869 -11.240 A H1' A 10 ATOM A H1' A 1 9 1.00 1 H 0.00 1.272 7.445 -12.286 A H8 A 10 ATOM A H8 A 1 9 1.00 1 H 0.00 0.537 1.376 -13.097 A H61 A 10 ATOM A H61 A 1 9 1.00 1 H 0.00 -0.273 3.025 -13.075 A H62 A 10 ATOM A H62 A 1 9 1.00 1 H 0.00 4.775 2.005 -12.426 A H2 A 10 ATOM A H2 A 1 9 1.00 1 H 0.00 10.086 -2.787 -8.580 B C5' 5PC 1 HETATM B C5' 5PC 2 1 1.00 1 C 0.00 10.409 -3.460 -9.791 B O5' 5PC 1 HETATM B O5' 5PC 2 1 1.00 1 O 0.00 10.094 -1.267 -8.811 B C4' 5PC 1 HETATM B C4' 5PC 2 1 1.00 1 C 0.00 9.151 -0.906 -9.848 B O4' 5PC 1 HETATM B O4' 5PC 2 1 1.00 1 O 0.00 9.693 -0.451 -7.575 B C3' 5PC 1 HETATM B C3' 5PC 2 1 1.00 1 C 0.00 10.810 -0.198 -6.709 B O3' 5PC 1 HETATM B O3' 5PC 2 1 1.00 1 O 0.00 9.191 0.825 -8.236 B C2' 5PC 1 HETATM B C2' 5PC 2 1 1.00 1 C 0.00 8.467 0.320 -9.487 B C1' 5PC 1 HETATM B C1' 5PC 2 1 1.00 1 C 0.00 6.991 0.116 -9.327 B N1 5PC 1 HETATM B N1 5PC 2 1 1.00 1 N 0.00 6.108 1.177 -9.476 B C2 5PC 1 HETATM B C2 5PC 2 1 1.00 1 C 0.00 6.512 2.322 -9.688 B O2 5PC 1 HETATM B O2 5PC 2 1 1.00 1 O 0.00 4.673 0.894 -9.373 B N3 5PC 1 HETATM B N3 5PC 2 1 1.00 1 N 0.00 4.210 -0.295 -9.130 B C4 5PC 1 HETATM B C4 5PC 2 1 1.00 1 C 0.00 2.793 -0.396 -9.062 B N4 5PC 1 HETATM B N4 5PC 2 1 1.00 1 N 0.00 5.045 -1.382 -8.947 B C5 5PC 1 HETATM B C5 5PC 2 1 1.00 1 C 0.00 6.403 -1.229 -9.040 B C6 5PC 1 HETATM B C6 5PC 2 1 1.00 1 C 0.00 4.606 -2.727 -8.636 B C7 5PC 1 HETATM B C7 5PC 2 1 1.00 1 C 0.00 4.239 -3.844 -8.370 B C8 5PC 1 HETATM B C8 5PC 2 1 1.00 1 C 0.00 3.815 -5.139 -8.056 B C9 5PC 1 HETATM B C9 5PC 2 1 1.00 1 C 0.00 10.814 -3.063 -7.794 B H5' 5PC 1 HETATM B H5' 5PC 2 1 1.00 1 H 0.00 9.098 -3.127 -8.218 B H5'' 5PC 1 HETATM B H5'' 5PC 2 1 1.00 1 H 0.00 11.108 -0.961 -9.138 B H4' 5PC 1 HETATM B H4' 5PC 2 1 1.00 1 H 0.00 8.865 -0.949 -7.029 B H3' 5PC 1 HETATM B H3' 5PC 2 1 1.00 1 H 0.00 8.556 1.444 -7.591 B H2' 5PC 1 HETATM B H2' 5PC 2 1 1.00 1 H 0.00 10.047 1.463 -8.525 B H2'' 5PC 1 HETATM B H2'' 5PC 2 1 1.00 1 H 0.00 8.637 1.067 -10.279 B H1' 5PC 1 HETATM B H1' 5PC 2 1 1.00 1 H 0.00 2.364 -1.300 -8.841 B H41 5PC 1 HETATM B H41 5PC 2 1 1.00 1 H 0.00 2.229 0.454 -9.199 B H42 5PC 1 HETATM B H42 5PC 2 1 1.00 1 H 0.00 7.083 -2.073 -8.902 B H6 5PC 1 HETATM B H6 5PC 2 1 1.00 1 H 0.00 4.036 -5.841 -8.880 B H91 5PC 1 HETATM B H91 5PC 2 1 1.00 1 H 0.00 4.322 -5.510 -7.146 B H92 5PC 1 HETATM B H92 5PC 2 1 1.00 1 H 0.00 2.726 -5.164 -7.870 B H93 5PC 1 HETATM B H93 5PC 2 1 1.00 1 H 0.00 9.858 -3.055 -10.468 B HO5' 5PC 1 HETATM B HO5' 5PC 2 1 1.00 1 H 0.00 10.628 0.039 -5.117 B P 5PC 2 HETATM B P 5PC 2 2 1.00 1 P 0.00 12.007 0.130 -4.461 B OP1 5PC 2 HETATM B OP1 5PC 2 2 1.00 1 O 0.00 9.854 -1.136 -4.518 B OP2 5PC 2 HETATM B OP2 5PC 2 2 1.00 1 O 0.00 10.355 2.708 -5.158 B C5' 5PC 2 HETATM B C5' 5PC 2 2 1.00 1 C 0.00 9.807 1.411 -4.858 B O5' 5PC 2 HETATM B O5' 5PC 2 2 1.00 1 O 0.00 9.260 3.790 -5.226 B C4' 5PC 2 HETATM B C4' 5PC 2 2 1.00 1 C 0.00 8.286 3.470 -6.242 B O4' 5PC 2 HETATM B O4' 5PC 2 2 1.00 1 O 0.00 8.474 4.009 -3.926 B C3' 5PC 2 HETATM B C3' 5PC 2 2 1.00 1 C 0.00 9.158 4.928 -3.055 B O3' 5PC 2 HETATM B O3' 5PC 2 2 1.00 1 O 0.00 7.178 4.595 -4.477 B C2' 5PC 2 HETATM B C2' 5PC 2 2 1.00 1 C 0.00 6.965 3.872 -5.815 B C1' 5PC 2 HETATM B C1' 5PC 2 2 1.00 1 C 0.00 6.007 2.720 -5.737 B N1 5PC 2 HETATM B N1 5PC 2 2 1.00 1 N 0.00 4.641 2.948 -5.667 B C2 5PC 2 HETATM B C2 5PC 2 2 1.00 1 C 0.00 4.183 4.092 -5.645 B O2 5PC 2 HETATM B O2 5PC 2 2 1.00 1 O 0.00 3.753 1.784 -5.598 B N3 5PC 2 HETATM B N3 5PC 2 2 1.00 1 N 0.00 4.200 0.567 -5.539 B C4 5PC 2 HETATM B C4 5PC 2 2 1.00 1 C 0.00 3.200 -0.439 -5.440 B N4 5PC 2 HETATM B N4 5PC 2 2 1.00 1 N 0.00 5.552 0.282 -5.578 B C5 5PC 2 HETATM B C5 5PC 2 2 1.00 1 C 0.00 6.464 1.296 -5.700 B C6 5PC 2 HETATM B C6 5PC 2 2 1.00 1 C 0.00 6.128 -1.044 -5.505 B C7 5PC 2 HETATM B C7 5PC 2 2 1.00 1 C 0.00 6.613 -2.145 -5.448 B C8 5PC 2 HETATM B C8 5PC 2 2 1.00 1 C 0.00 7.182 -3.421 -5.386 B C9 5PC 2 HETATM B C9 5PC 2 2 1.00 1 C 0.00 10.893 2.676 -6.125 B H5' 5PC 2 HETATM B H5' 5PC 2 2 1.00 1 H 0.00 11.111 2.975 -4.395 B H5'' 5PC 2 HETATM B H5'' 5PC 2 2 1.00 1 H 0.00 9.744 4.744 -5.511 B H4' 5PC 2 HETATM B H4' 5PC 2 2 1.00 1 H 0.00 8.276 3.043 -3.418 B H3' 5PC 2 HETATM B H3' 5PC 2 2 1.00 1 H 0.00 6.332 4.497 -3.783 B H2' 5PC 2 HETATM B H2' 5PC 2 2 1.00 1 H 0.00 7.295 5.679 -4.651 B H2'' 5PC 2 HETATM B H2'' 5PC 2 2 1.00 1 H 0.00 6.583 4.602 -6.555 B H1' 5PC 2 HETATM B H1' 5PC 2 2 1.00 1 H 0.00 3.478 -1.422 -5.354 B H41 5PC 2 HETATM B H41 5PC 2 2 1.00 1 H 0.00 2.217 -0.141 -5.445 B H42 5PC 2 HETATM B H42 5PC 2 2 1.00 1 H 0.00 7.531 1.089 -5.783 B H6 5PC 2 HETATM B H6 5PC 2 2 1.00 1 H 0.00 6.739 -4.013 -4.564 B H91 5PC 2 HETATM B H91 5PC 2 2 1.00 1 H 0.00 7.024 -3.972 -6.330 B H92 5PC 2 HETATM B H92 5PC 2 2 1.00 1 H 0.00 8.271 -3.352 -5.207 B H93 5PC 2 HETATM B H93 5PC 2 2 1.00 1 H 0.00 8.779 5.126 -1.488 B P PDU 3 HETATM B P PDU 2 3 1.00 1 P 0.00 8.666 3.761 -0.807 B OP2 PDU 3 HETATM B OP2 PDU 2 3 1.00 1 O 0.00 9.876 5.946 -0.808 B OP1 PDU 3 HETATM B OP1 PDU 2 3 1.00 1 O 0.00 7.368 5.903 -1.350 B O5' PDU 3 HETATM B O5' PDU 2 3 1.00 1 O 0.00 7.139 7.213 -1.898 B C5' PDU 3 HETATM B C5' PDU 2 3 1.00 1 C 0.00 5.639 7.576 -1.862 B C4' PDU 3 HETATM B C4' PDU 2 3 1.00 1 C 0.00 4.872 6.549 -2.532 B O4' PDU 3 HETATM B O4' PDU 2 3 1.00 1 O 0.00 5.052 7.744 -0.445 B C3' PDU 3 HETATM B C3' PDU 2 3 1.00 1 C 0.00 4.219 8.920 -0.407 B O3' PDU 3 HETATM B O3' PDU 2 3 1.00 1 O 0.00 4.230 6.472 -0.251 B C2' PDU 3 HETATM B C2' PDU 2 3 1.00 1 C 0.00 3.815 6.081 -1.673 B C1' PDU 3 HETATM B C1' PDU 2 3 1.00 1 C 0.00 3.598 4.612 -1.837 B N1 PDU 3 HETATM B N1 PDU 2 3 1.00 1 N 0.00 2.323 4.101 -2.027 B C2 PDU 3 HETATM B C2 PDU 2 3 1.00 1 C 0.00 1.312 4.804 -2.037 B O2 PDU 3 HETATM B O2 PDU 2 3 1.00 1 O 0.00 2.133 2.766 -2.198 B N3 PDU 3 HETATM B N3 PDU 2 3 1.00 1 N 0.00 3.120 1.832 -2.181 B C4 PDU 3 HETATM B C4 PDU 2 3 1.00 1 C 0.00 2.830 0.645 -2.325 B O4 PDU 3 HETATM B O4 PDU 2 3 1.00 1 O 0.00 4.574 2.348 -1.972 B C5 PDU 3 HETATM B C5 PDU 2 3 1.00 1 C 0.00 5.709 1.472 -1.979 B C5A PDU 3 HETATM B C5A PDU 2 3 1.00 1 C 0.00 6.668 0.744 -1.990 B C5B PDU 3 HETATM B C5B PDU 2 3 1.00 1 C 0.00 7.787 -0.096 -2.008 B C5M PDU 3 HETATM B C5M PDU 2 3 1.00 1 C 0.00 4.761 3.679 -1.800 B C6 PDU 3 HETATM B C6 PDU 2 3 1.00 1 C 0.00 7.500 7.254 -2.942 B H5' PDU 3 HETATM B H5' PDU 2 3 1.00 1 H 0.00 7.734 7.963 -1.342 B H5'' PDU 3 HETATM B H5'' PDU 2 3 1.00 1 H 0.00 5.516 8.524 -2.419 B H4' PDU 3 HETATM B H4' PDU 2 3 1.00 1 H 0.00 5.844 7.825 0.326 B H3' PDU 3 HETATM B H3' PDU 2 3 1.00 1 H 0.00 3.362 6.616 0.414 B H2'' PDU 3 HETATM B H2'' PDU 2 3 1.00 1 H 0.00 4.870 5.698 0.214 B H2' PDU 3 HETATM B H2' PDU 2 3 1.00 1 H 0.00 2.904 6.657 -1.938 B H1' PDU 3 HETATM B H1' PDU 2 3 1.00 1 H 0.00 1.168 2.444 -2.321 B H3 PDU 3 HETATM B H3 PDU 2 3 1.00 1 H 0.00 7.661 -0.914 -2.740 B H71 PDU 3 HETATM B H71 PDU 2 3 1.00 1 H 0.00 8.695 0.468 -2.293 B H72 PDU 3 HETATM B H72 PDU 2 3 1.00 1 H 0.00 7.964 -0.547 -1.015 B H73 PDU 3 HETATM B H73 PDU 2 3 1.00 1 H 0.00 5.761 4.086 -1.641 B H6 PDU 3 HETATM B H6 PDU 2 3 1.00 1 H 0.00 3.647 9.559 0.971 B P 5PC 4 HETATM B P 5PC 2 4 1.00 1 P 0.00 3.316 11.035 0.741 B OP1 5PC 4 HETATM B OP1 5PC 2 4 1.00 1 O 0.00 4.704 9.446 2.073 B OP2 5PC 4 HETATM B OP2 5PC 2 4 1.00 1 O 0.00 1.043 8.984 0.772 B C5' 5PC 4 HETATM B C5' 5PC 2 4 1.00 1 C 0.00 2.311 8.761 1.416 B O5' 5PC 4 HETATM B O5' 5PC 2 4 1.00 1 O 0.00 0.025 7.872 1.085 B C4' 5PC 4 HETATM B C4' 5PC 2 4 1.00 1 C 0.00 0.449 6.616 0.523 B O4' 5PC 4 HETATM B O4' 5PC 2 4 1.00 1 O 0.00 -0.214 7.582 2.574 B C3' 5PC 4 HETATM B C3' 5PC 2 4 1.00 1 C 0.00 -1.228 8.435 3.139 B O3' 5PC 4 HETATM B O3' 5PC 2 4 1.00 1 O 0.00 -0.625 6.109 2.567 B C2' 5PC 4 HETATM B C2' 5PC 2 4 1.00 1 C 0.00 -0.337 5.589 1.156 B C1' 5PC 4 HETATM B C1' 5PC 2 4 1.00 1 C 0.00 0.351 4.269 1.177 B N1 5PC 4 HETATM B N1 5PC 2 4 1.00 1 N 0.00 -0.340 3.095 0.940 B C2 5PC 4 HETATM B C2 5PC 2 4 1.00 1 C 0.00 -1.555 3.095 0.736 B O2 5PC 4 HETATM B O2 5PC 2 4 1.00 1 O 0.00 0.422 1.842 0.959 B N3 5PC 4 HETATM B N3 5PC 2 4 1.00 1 N 0.00 1.697 1.805 1.208 B C4 5PC 4 HETATM B C4 5PC 2 4 1.00 1 C 0.00 2.281 0.511 1.166 B N4 5PC 4 HETATM B N4 5PC 2 4 1.00 1 N 0.00 2.423 2.952 1.484 B C5 5PC 4 HETATM B C5 5PC 2 4 1.00 1 C 0.00 1.798 4.170 1.506 B C6 5PC 4 HETATM B C6 5PC 2 4 1.00 1 C 0.00 3.846 3.001 1.737 B C7 5PC 4 HETATM B C7 5PC 2 4 1.00 1 C 0.00 5.034 3.045 1.935 B C8 5PC 4 HETATM B C8 5PC 2 4 1.00 1 C 0.00 6.414 3.099 2.156 B C9 5PC 4 HETATM B C9 5PC 2 4 1.00 1 C 0.00 1.179 9.054 -0.324 B H5' 5PC 4 HETATM B H5' 5PC 2 4 1.00 1 H 0.00 0.639 9.963 1.093 B H5'' 5PC 4 HETATM B H5'' 5PC 2 4 1.00 1 H 0.00 -0.937 8.157 0.614 B H4' 5PC 4 HETATM B H4' 5PC 2 4 1.00 1 H 0.00 0.733 7.693 3.140 B H3' 5PC 4 HETATM B H3' 5PC 2 4 1.00 1 H 0.00 -0.065 5.580 3.356 B H2' 5PC 4 HETATM B H2' 5PC 2 4 1.00 1 H 0.00 -1.690 5.962 2.794 B H2'' 5PC 4 HETATM B H2'' 5PC 2 4 1.00 1 H 0.00 -1.292 5.525 0.594 B H1' 5PC 4 HETATM B H1' 5PC 2 4 1.00 1 H 0.00 3.286 0.401 1.340 B H41 5PC 4 HETATM B H41 5PC 2 4 1.00 1 H 0.00 1.671 -0.283 0.934 B H42 5PC 4 HETATM B H42 5PC 2 4 1.00 1 H 0.00 2.309 5.101 1.762 B H6 5PC 4 HETATM B H6 5PC 2 4 1.00 1 H 0.00 6.771 2.191 2.673 B H91 5PC 4 HETATM B H91 5PC 2 4 1.00 1 H 0.00 6.961 3.181 1.197 B H92 5PC 4 HETATM B H92 5PC 2 4 1.00 1 H 0.00 6.684 3.975 2.773 B H93 5PC 4 HETATM B H93 5PC 2 4 1.00 1 H 0.00 -1.695 8.335 4.695 B P 5PC 5 HETATM B P 5PC 2 5 1.00 1 P 0.00 -2.422 9.623 5.089 B OP1 5PC 5 HETATM B OP1 5PC 2 5 1.00 1 O 0.00 -0.470 8.146 5.593 B OP2 5PC 5 HETATM B OP2 5PC 2 5 1.00 1 O 0.00 -4.016 7.063 4.308 B C5' 5PC 5 HETATM B C5' 5PC 2 5 1.00 1 C 0.00 -2.693 7.070 4.877 B O5' 5PC 5 HETATM B O5' 5PC 2 5 1.00 1 O 0.00 -4.669 5.670 4.358 B C4' 5PC 5 HETATM B C4' 5PC 2 5 1.00 1 C 0.00 -3.958 4.721 3.539 B O4' 5PC 5 HETATM B O4' 5PC 2 5 1.00 1 O 0.00 -4.777 5.038 5.751 B C3' 5PC 5 HETATM B C3' 5PC 2 5 1.00 1 C 0.00 -5.912 5.549 6.484 B O3' 5PC 5 HETATM B O3' 5PC 2 5 1.00 1 O 0.00 -4.904 3.559 5.392 B C2' 5PC 5 HETATM B C2' 5PC 2 5 1.00 1 C 0.00 -4.170 3.388 4.058 B C1' 5PC 5 HETATM B C1' 5PC 2 5 1.00 1 C 0.00 -2.882 2.645 4.183 B N1 5PC 5 HETATM B N1 5PC 2 5 1.00 1 N 0.00 -2.820 1.277 3.976 B C2 5PC 5 HETATM B C2 5PC 2 5 1.00 1 C 0.00 -3.830 0.619 3.721 B O2 5PC 5 HETATM B O2 5PC 2 5 1.00 1 O 0.00 -1.512 0.629 4.096 B N3 5PC 5 HETATM B N3 5PC 2 5 1.00 1 N 0.00 -0.439 1.279 4.430 B C4 5PC 5 HETATM B C4 5PC 2 5 1.00 1 C 0.00 0.738 0.487 4.525 B N4 5PC 5 HETATM B N4 5PC 2 5 1.00 1 N 0.00 -0.453 2.642 4.671 B C5 5PC 5 HETATM B C5 5PC 2 5 1.00 1 C 0.00 -1.626 3.345 4.572 B C6 5PC 5 HETATM B C6 5PC 2 5 1.00 1 C 0.00 0.705 3.435 5.020 B C7 5PC 5 HETATM B C7 5PC 2 5 1.00 1 C 0.00 1.670 4.100 5.301 B C8 5PC 5 HETATM B C8 5PC 2 5 1.00 1 C 0.00 2.789 4.875 5.619 B C9 5PC 5 HETATM B C9 5PC 2 5 1.00 1 C 0.00 -3.977 7.410 3.257 B H5' 5PC 5 HETATM B H5' 5PC 2 5 1.00 1 H 0.00 -4.649 7.794 4.847 B H5'' 5PC 5 HETATM B H5'' 5PC 2 5 1.00 1 H 0.00 -5.684 5.764 3.938 B H4' 5PC 5 HETATM B H4' 5PC 2 5 1.00 1 H 0.00 -3.843 5.202 6.326 B H3' 5PC 5 HETATM B H3' 5PC 2 5 1.00 1 H 0.00 -4.499 2.935 6.201 B H2' 5PC 5 HETATM B H2' 5PC 2 5 1.00 1 H 0.00 -5.966 3.274 5.270 B H2'' 5PC 5 HETATM B H2'' 5PC 2 5 1.00 1 H 0.00 -4.851 2.853 3.371 B H1' 5PC 5 HETATM B H1' 5PC 2 5 1.00 1 H 0.00 1.625 0.929 4.788 B H41 5PC 5 HETATM B H41 5PC 2 5 1.00 1 H 0.00 0.667 -0.509 4.285 B H42 5PC 5 HETATM B H42 5PC 2 5 1.00 1 H 0.00 -1.698 4.421 4.768 B H6 5PC 5 HETATM B H6 5PC 2 5 1.00 1 H 0.00 3.220 4.573 6.591 B H91 5PC 5 HETATM B H91 5PC 2 5 1.00 1 H 0.00 3.574 4.770 4.848 B H92 5PC 5 HETATM B H92 5PC 2 5 1.00 1 H 0.00 2.518 5.945 5.684 B H93 5PC 5 HETATM B H93 5PC 2 5 1.00 1 H 0.00 -6.505 4.853 7.828 B P PDU 6 HETATM B P PDU 2 6 1.00 1 P 0.00 -5.353 4.386 8.724 B OP2 PDU 6 HETATM B OP2 PDU 2 6 1.00 1 O 0.00 -7.372 5.856 8.591 B OP1 PDU 6 HETATM B OP1 PDU 2 6 1.00 1 O 0.00 -7.409 3.578 7.401 B O5' PDU 6 HETATM B O5' PDU 2 6 1.00 1 O 0.00 -7.884 2.616 8.352 B C5' PDU 6 HETATM B C5' PDU 2 6 1.00 1 C 0.00 -8.468 1.378 7.633 B C4' PDU 6 HETATM B C4' PDU 2 6 1.00 1 C 0.00 -7.499 0.846 6.699 B O4' PDU 6 HETATM B O4' PDU 2 6 1.00 1 O 0.00 -8.817 0.237 8.607 B C3' PDU 6 HETATM B C3' PDU 2 6 1.00 1 C 0.00 -9.980 -0.487 8.157 B O3' PDU 6 HETATM B O3' PDU 2 6 1.00 1 O 0.00 -7.574 -0.639 8.543 B C2' PDU 6 HETATM B C2' PDU 2 6 1.00 1 C 0.00 -7.061 -0.466 7.110 B C1' PDU 6 HETATM B C1' PDU 2 6 1.00 1 C 0.00 -5.577 -0.609 7.033 B N1 PDU 6 HETATM B N1 PDU 2 6 1.00 1 N 0.00 -4.998 -1.816 6.670 B C2 PDU 6 HETATM B C2 PDU 2 6 1.00 1 C 0.00 -5.659 -2.809 6.367 B O2 PDU 6 HETATM B O2 PDU 2 6 1.00 1 O 0.00 -3.643 -1.953 6.650 B N3 PDU 6 HETATM B N3 PDU 2 6 1.00 1 N 0.00 -2.762 -0.974 6.994 B C4 PDU 6 HETATM B C4 PDU 2 6 1.00 1 C 0.00 -1.554 -1.204 6.956 B O4 PDU 6 HETATM B O4 PDU 2 6 1.00 1 O 0.00 -3.362 0.395 7.430 B C5 PDU 6 HETATM B C5 PDU 2 6 1.00 1 C 0.00 -2.531 1.496 7.820 B C5A PDU 6 HETATM B C5A PDU 2 6 1.00 1 C 0.00 -1.837 2.426 8.141 B C5B PDU 6 HETATM B C5B PDU 2 6 1.00 1 C 0.00 -1.034 3.511 8.508 B C5M PDU 6 HETATM B C5M PDU 2 6 1.00 1 C 0.00 -4.711 0.533 7.429 B C6 PDU 6 HETATM B C6 PDU 2 6 1.00 1 C 0.00 -8.646 3.082 9.004 B H5' PDU 6 HETATM B H5' PDU 2 6 1.00 1 H 0.00 -7.052 2.313 9.018 B H5'' PDU 6 HETATM B H5'' PDU 2 6 1.00 1 H 0.00 -9.371 1.693 7.076 B H4' PDU 6 HETATM B H4' PDU 2 6 1.00 1 H 0.00 -8.979 0.614 9.635 B H3' PDU 6 HETATM B H3' PDU 2 6 1.00 1 H 0.00 -7.769 -1.695 8.788 B H2'' PDU 6 HETATM B H2'' PDU 2 6 1.00 1 H 0.00 -6.842 -0.267 9.284 B H2' PDU 6 HETATM B H2' PDU 2 6 1.00 1 H 0.00 -7.570 -1.201 6.453 B H1' PDU 6 HETATM B H1' PDU 2 6 1.00 1 H 0.00 -3.262 -2.860 6.367 B H3 PDU 6 HETATM B H3 PDU 2 6 1.00 1 H 0.00 -1.287 4.405 7.909 B H71 PDU 6 HETATM B H71 PDU 2 6 1.00 1 H 0.00 -1.174 3.766 9.574 B H72 PDU 6 HETATM B H72 PDU 2 6 1.00 1 H 0.00 0.036 3.286 8.344 B H73 PDU 6 HETATM B H73 PDU 2 6 1.00 1 H 0.00 -5.193 1.473 7.713 B H6 PDU 6 HETATM B H6 PDU 2 6 1.00 1 H 0.00 -10.784 -1.526 9.114 B P PDU 7 HETATM B P PDU 2 7 1.00 1 P 0.00 -11.042 -0.875 10.474 B OP2 PDU 7 HETATM B OP2 PDU 2 7 1.00 1 O 0.00 -12.123 -1.885 8.465 B OP1 PDU 7 HETATM B OP1 PDU 2 7 1.00 1 O 0.00 -9.905 -2.872 9.325 B O5' PDU 7 HETATM B O5' PDU 2 7 1.00 1 O 0.00 -9.744 -3.852 8.282 B C5' PDU 7 HETATM B C5' PDU 2 7 1.00 1 C 0.00 -8.627 -4.866 8.600 B C4' PDU 7 HETATM B C4' PDU 2 7 1.00 1 C 0.00 -7.337 -4.231 8.552 B O4' PDU 7 HETATM B O4' PDU 2 7 1.00 1 O 0.00 -8.720 -5.565 9.975 B C3' PDU 7 HETATM B C3' PDU 2 7 1.00 1 C 0.00 -8.980 -6.955 9.811 B O3' PDU 7 HETATM B O3' PDU 2 7 1.00 1 O 0.00 -7.338 -5.357 10.601 B C2' PDU 7 HETATM B C2' PDU 2 7 1.00 1 C 0.00 -6.456 -4.971 9.409 B C1' PDU 7 HETATM B C1' PDU 2 7 1.00 1 C 0.00 -5.245 -4.170 9.757 B N1 PDU 7 HETATM B N1 PDU 2 7 1.00 1 N 0.00 -3.976 -4.669 9.501 B C2 PDU 7 HETATM B C2 PDU 2 7 1.00 1 C 0.00 -3.776 -5.805 9.070 B O2 PDU 7 HETATM B O2 PDU 2 7 1.00 1 O 0.00 -2.876 -3.902 9.719 B N3 PDU 7 HETATM B N3 PDU 2 7 1.00 1 N 0.00 -2.895 -2.624 10.178 B C4 PDU 7 HETATM B C4 PDU 2 7 1.00 1 C 0.00 -1.832 -2.026 10.338 B O4 PDU 7 HETATM B O4 PDU 2 7 1.00 1 O 0.00 -4.296 -2.003 10.464 B C5 PDU 7 HETATM B C5 PDU 2 7 1.00 1 C 0.00 -4.432 -0.633 10.864 B C5A PDU 7 HETATM B C5A PDU 2 7 1.00 1 C 0.00 -4.547 0.522 11.188 B C5B PDU 7 HETATM B C5B PDU 2 7 1.00 1 C 0.00 -4.682 1.866 11.552 B C5M PDU 7 HETATM B C5M PDU 2 7 1.00 1 C 0.00 -5.394 -2.781 10.279 B C6 PDU 7 HETATM B C6 PDU 2 7 1.00 1 C 0.00 -9.519 -3.351 7.320 B H5' PDU 7 HETATM B H5' PDU 2 7 1.00 1 H 0.00 -10.703 -4.382 8.131 B H5'' PDU 7 HETATM B H5'' PDU 2 7 1.00 1 H 0.00 -8.644 -5.630 7.800 B H4' PDU 7 HETATM B H4' PDU 2 7 1.00 1 H 0.00 -9.502 -5.115 10.618 B H3' PDU 7 HETATM B H3' PDU 2 7 1.00 1 H 0.00 -8.976 -7.334 10.694 B H2 PDU 7 HETATM B H2 PDU 2 7 1.00 1 H 0.00 -6.953 -6.242 11.138 B H2'' PDU 7 HETATM B H2'' PDU 2 7 1.00 1 H 0.00 -7.394 -4.533 11.337 B H2' PDU 7 HETATM B H2' PDU 2 7 1.00 1 H 0.00 -6.177 -5.902 8.871 B H1' PDU 7 HETATM B H1' PDU 2 7 1.00 1 H 0.00 -1.962 -4.321 9.516 B H3 PDU 7 HETATM B H3 PDU 2 7 1.00 1 H 0.00 -3.852 2.185 12.208 B H71 PDU 7 HETATM B H71 PDU 2 7 1.00 1 H 0.00 -4.676 2.518 10.658 B H72 PDU 7 HETATM B H72 PDU 2 7 1.00 1 H 0.00 -5.632 2.040 12.089 B H73 PDU 7 HETATM B H73 PDU 2 7 1.00 1 H 0.00 -6.400 -2.414 10.490 B H6 PDU 7 HETATM B H6 PDU 2 7 1.00 1 H 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Znosko, B.M. Barnes III, T.W. Krugh, T.R. Turner, D.H. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C12 H16 N3 O7 P 345.245 n 5(1-PROPYNYL)-2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y ADENOSINE-5'-MONOPHOSPHATE RNA linking C10 H14 N5 O8 P 363.221 y GUANOSINE-5'-MONOPHOSPHATE RNA linking C12 H15 N2 O8 P 346.230 5(1-PROPYNYL)-2'-DEOXYURIDINE-5-MONOPHOSPHATE DNA linking N 1 N O N 2 N P N 3 N O N 4 N O N 5 N C N 6 N O N 7 R C N 8 N O N 9 S C N 10 N O N 11 N C N 12 R C N 13 N N N 14 N C N 15 N O N 16 N N N 17 N C N 18 N N N 19 N C N 20 N C N 21 N C N 22 N C N 23 N C N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N O N 41 N P N 42 N O N 43 N O N 44 N O N 45 N C N 46 R C N 47 N O N 48 S C N 49 N O N 50 R C N 51 N O N 52 R C Y 53 N N Y 54 N C Y 55 N N Y 56 N C Y 57 N C N 58 N N Y 59 N N Y 60 N C Y 61 N N Y 62 N C N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N O N 78 N P N 79 N O N 80 N O N 81 N O N 82 N C N 83 R C N 84 N O N 85 S C N 86 N O N 87 R C N 88 N O N 89 R C Y 90 N N Y 91 N C Y 92 N N Y 93 N C N 94 N C N 95 N O N 96 N N N 97 N C N 98 N N N 99 N N Y 100 N C N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N P N 116 N O N 117 N O N 118 N O N 119 N C N 120 R C N 121 N O N 122 S C N 123 N O N 124 N C N 125 R C N 126 N N N 127 N C N 128 N O N 129 N N N 130 N C N 131 N O N 132 N C N 133 N C N 134 N C N 135 N C N 136 N C N 137 N O N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N doub N 27 N sing N 28 N doub N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N trip N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N doub N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing Y 65 N sing Y 66 N sing Y 67 N doub N 68 N sing Y 69 N sing Y 70 N sing Y 71 N doub N 72 N sing Y 73 N doub N 74 N sing N 75 N sing Y 76 N sing Y 77 N doub N 78 N sing Y 79 N sing N 80 N sing N 81 N sing N 82 N doub N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing Y 104 N sing Y 105 N sing Y 106 N doub N 107 N sing Y 108 N sing N 109 N sing Y 110 N doub N 111 N doub N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N doub N 122 N trip N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N doub N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N doub N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N doub N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing US J.Am.Chem.Soc. JACSAT 0004 0002-7863 125 6090 6097 10.1021/ja021285d 12785839 NMR Studies of DNA Single Strands and DNA:RNA Hybrids With and Without 1-Propynylation at C5 of Oligopyrimidines 2003 US J.Am.Chem.Soc. JACSAT 0004 0002-7863 123 4107 4118 10.1021/ja003208t Long-Range Cooperativity in Molecular Recognition of RNA by Oligodeoxynucleotides with Multiple C5-(1-Propynyl) Pyrimidines 2001 10.2210/pdb1nts/pdb pdb_00001nts 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 SINGLE WAVELENGTH M 1 1.0 2981.895 5'-R(*AP*AP*AP*GP*GP*AP*GP*GP*A)-3' 1 syn polymer 2248.606 5'-D(*(5PC)P*(5PC)P*(PDU)P*(5PC)P*(5PC)P*(PDU)P*(PDU))-3' 1 syn polymer no no AAAGGAGGA AAAGGAGGA A polyribonucleotide no yes (5PC)(5PC)(PDU)(5PC)(5PC)(PDU)(PDU) CCXCCXX B polydeoxyribonucleotide n n n n n n n n n n n n n n n n -15.043 1 20 A 3 B 7 6.637 A_A3:PDU7_B 1 -11.556 -0.177 -0.002 0.338 -2.961 1 20 A 4 B 6 -9.917 A_A4:PDU6_B 2 -12.887 0.756 -0.177 0.385 6.241 1 19 A 5 B 5 -0.166 A_G5:5PC5_B 3 -14.136 -1.195 0.529 -0.026 9.183 1 19 A 6 B 4 2.314 A_G6:5PC4_B 4 -15.996 -1.431 0.238 -0.064 4.723 1 20 A 7 B 3 -2.597 A_A7:PDU3_B 5 -12.833 -0.347 0.231 0.209 10.411 1 19 A 8 B 2 -0.783 A_G8:5PC2_B 6 -20.545 -1.346 0.484 -0.118 -5.843 1 19 A 9 B 1 -3.533 A_G9:5PC1_B 7 -23.074 -0.346 -0.352 0.170 3.227 33.540 A A 3 4 -2.653 B B 7 6 3.322 -1.526 -0.816 -1.040 AA_A3A4:PDU6PDU7_BB 1 4.577 -7.958 33.201 -1.549 2.171 2.557 25.022 A A 4 5 13.044 B B 6 5 3.048 5.588 0.920 -1.200 AA_A4G5:5PC5PDU6_BB 2 -3.424 7.993 24.162 -4.217 -3.010 3.287 33.630 A A 5 6 4.503 B B 5 4 3.360 2.602 0.173 -0.898 AA_G5G6:5PC45PC5_BB 3 1.903 -3.293 33.480 -1.985 0.018 3.509 37.962 A A 6 7 -0.246 B B 4 3 3.499 -0.160 -0.241 -1.006 AA_G6A7:PDU35PC4_BB 4 -1.087 1.672 37.947 -1.524 0.222 2.853 31.162 A A 7 8 9.575 B B 3 2 3.129 5.110 0.125 -1.250 AA_A7G8:5PC2PDU3_BB 5 -3.654 6.846 30.538 -3.228 -0.877 3.579 39.874 A A 8 9 9.885 B B 2 1 3.836 6.706 -0.385 -1.036 AA_G8G9:5PC15PC2_BB 6 3.082 -4.543 39.213 -2.404 0.972 atom_site chem_comp entity entity_poly pdbx_nmr_software pdbx_struct_assembly pdbx_struct_oper_list struct_conn chem_comp_atom chem_comp_bond database_2 repository Initial release Version format compliance Version format compliance Atomic model Data collection Derived calculations Non-polymer description Polymer sequence Structure summary Data collection Database references 1 0 2003-06-10 1 1 2008-04-29 1 2 2011-07-13 2 0 2021-07-28 2 1 2024-05-01 _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.auth_atom_id _atom_site.label_atom_id _chem_comp.formula _chem_comp.formula_weight _chem_comp.mon_nstd_flag _entity.formula_weight _entity_poly.pdbx_seq_one_letter_code_can _pdbx_nmr_software.name _struct_conn.pdbx_leaving_atom_flag _database_2.pdbx_DOI _database_2.pdbx_database_accession DNA:RNA hybrid with same sequence DNA:RNA hybrid with propynylated bases 2-7 in DNA strand RCSB Y RCSB 2003-01-30 REL REL 1 2D NOESY 80 mM NaCl 7.0 ambient 273 K 80 mM NaCl 7.0 ambient 303 K The structure is based on a total of 149 interproton distance restraints, 18 hydrogen bond restraints, and 59 dihedral angle restraints. simulated annealing, energy minimization 1 minimized average structure ~1mM hybrid, 80 mM NaCl, 10 mM phosphate buffer, 0.5 mM EDTA, 90% H2O, 10% D2O 90% H2O/10% D2O ~2.5 mM hybrid, 80 mM NaCl, 10 mM phosphate, 0.5 mM EDTA, 99.996% D2O 99.996% D2O Varian collection VNMR 5.2 MSI data analysis Felix 2000 MSI structure solution Discover 95.0 MSI refinement Discover 95.0 500 Varian INOVA A 2 n 1 A 2 A A 3 n 2 A 3 A A 4 n 3 A 4 A G 5 n 4 G 5 A G 6 n 5 G 6 A A 7 n 6 A 7 A G 8 n 7 G 8 A G 9 n 8 G 9 A A 10 n 9 A 10 A 5PC 1 n 1 5PC 1 B 5PC 2 n 2 5PC 2 B PDU 3 n 3 PDU 3 B 5PC 4 n 4 5PC 4 B 5PC 5 n 5 5PC 5 B PDU 6 n 6 PDU 6 B PDU 7 n 7 PDU 7 B author_defined_assembly 2 dimeric B 5PC 1 B 5PC 1 DC B 5PC 2 B 5PC 2 DC B PDU 3 B PDU 3 DU B 5PC 4 B 5PC 4 DC B 5PC 5 B 5PC 5 DC B PDU 6 B PDU 6 DU B PDU 7 B PDU 7 DU 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 identity operation 0.0000000000 0.0000000000 0.0000000000 1 A A 2 0.071 SIDE CHAIN 1 5.20 0.50 110.60 115.80 A A A C2 N3 C4 A A A 2 2 2 N 1 -9.42 0.70 126.80 117.38 A A A N3 C4 C5 A A A 2 2 2 N 1 -6.40 0.50 103.90 97.50 A A A C5 N7 C8 A A A 2 2 2 N 1 8.59 0.50 113.80 122.39 A A A N7 C8 N9 A A A 2 2 2 N 1 -6.41 0.40 105.80 99.39 A A A C8 N9 C4 A A A 2 2 2 N 1 7.03 0.80 127.40 134.43 A A A N3 C4 N9 A A A 2 2 2 N 1 -9.64 1.50 119.60 109.96 A A A OP1 P OP2 A A A 3 3 3 N 1 4.99 0.50 110.60 115.59 A A A C2 N3 C4 A A A 3 3 3 N 1 -9.08 0.70 126.80 117.72 A A A N3 C4 C5 A A A 3 3 3 N 1 -6.53 0.50 103.90 97.37 A A A C5 N7 C8 A A A 3 3 3 N 1 8.41 0.50 113.80 122.21 A A A N7 C8 N9 A A A 3 3 3 N 1 -6.05 0.40 105.80 99.75 A A A C8 N9 C4 A A A 3 3 3 N 1 6.80 0.80 127.40 134.20 A A A N3 C4 N9 A A A 3 3 3 N 1 -10.11 1.50 119.60 109.49 A A A OP1 P OP2 A A A 4 4 4 N 1 5.16 0.50 110.60 115.76 A A A C2 N3 C4 A A A 4 4 4 N 1 -9.29 0.70 126.80 117.51 A A A N3 C4 C5 A A A 4 4 4 N 1 -6.38 0.50 103.90 97.52 A A A C5 N7 C8 A A A 4 4 4 N 1 8.37 0.50 113.80 122.17 A A A N7 C8 N9 A A A 4 4 4 N 1 -6.14 0.40 105.80 99.66 A A A C8 N9 C4 A A A 4 4 4 N 1 7.00 0.80 127.40 134.40 A A A N3 C4 N9 A A A 4 4 4 N 1 -10.00 1.50 119.60 109.60 A A A OP1 P OP2 G G G 5 5 5 N 1 11.20 0.50 111.90 123.10 A A A C2 N3 C4 G G G 5 5 5 N 1 -10.88 0.50 128.60 117.72 A A A N3 C4 C5 G G G 5 5 5 N 1 3.60 0.50 111.50 115.10 A A A C5 C6 N1 G G G 5 5 5 N 1 2.51 0.40 110.80 113.31 A A A C4 C5 N7 G G G 5 5 5 N 1 -7.11 0.50 104.30 97.19 A A A C5 N7 C8 G G G 5 5 5 N 1 8.68 0.50 113.10 121.78 A A A N7 C8 N9 G G G 5 5 5 N 1 -6.86 0.40 106.40 99.54 A A A C8 N9 C4 G G G 5 5 5 N 1 2.78 0.40 105.40 108.18 A A A N9 C4 C5 G G G 5 5 5 N 1 8.10 0.60 126.00 134.10 A A A N3 C4 N9 G G G 5 5 5 N 1 -4.74 0.60 128.60 123.86 A A A C5 C6 O6 G G G 5 5 5 N 1 -10.08 1.50 119.60 109.52 A A A OP1 P OP2 G G G 6 6 6 N 1 11.25 0.50 111.90 123.15 A A A C2 N3 C4 G G G 6 6 6 N 1 -10.86 0.50 128.60 117.74 A A A N3 C4 C5 G G G 6 6 6 N 1 3.62 0.50 111.50 115.12 A A A C5 C6 N1 G G G 6 6 6 N 1 2.53 0.40 110.80 113.33 A A A C4 C5 N7 G G G 6 6 6 N 1 -7.13 0.50 104.30 97.17 A A A C5 N7 C8 G G G 6 6 6 N 1 8.70 0.50 113.10 121.80 A A A N7 C8 N9 G G G 6 6 6 N 1 -6.91 0.40 106.40 99.49 A A A C8 N9 C4 G G G 6 6 6 N 1 2.77 0.40 105.40 108.17 A A A N9 C4 C5 G G G 6 6 6 N 1 8.08 0.60 126.00 134.08 A A A N3 C4 N9 G G G 6 6 6 N 1 -4.91 0.60 128.60 123.69 A A A C5 C6 O6 G G G 6 6 6 N 1 -10.10 1.50 119.60 109.50 A A A OP1 P OP2 A A A 7 7 7 N 1 5.12 0.50 110.60 115.72 A A A C2 N3 C4 A A A 7 7 7 N 1 -9.29 0.70 126.80 117.51 A A A N3 C4 C5 A A A 7 7 7 N 1 -6.43 0.50 103.90 97.47 A A A C5 N7 C8 A A A 7 7 7 N 1 8.43 0.50 113.80 122.23 A A A N7 C8 N9 A A A 7 7 7 N 1 -6.18 0.40 105.80 99.62 A A A C8 N9 C4 A A A 7 7 7 N 1 6.96 0.80 127.40 134.36 A A A N3 C4 N9 A A A 7 7 7 N 1 -10.09 1.50 119.60 109.51 A A A OP1 P OP2 G G G 8 8 8 N 1 11.14 0.50 111.90 123.04 A A A C2 N3 C4 G G G 8 8 8 N 1 -10.82 0.50 128.60 117.78 A A A N3 C4 C5 G G G 8 8 8 N 1 3.66 0.50 111.50 115.16 A A A C5 C6 N1 G G G 8 8 8 N 1 2.60 0.40 110.80 113.40 A A A C4 C5 N7 G G G 8 8 8 N 1 -7.19 0.50 104.30 97.11 A A A C5 N7 C8 G G G 8 8 8 N 1 8.70 0.50 113.10 121.80 A A A N7 C8 N9 G G G 8 8 8 N 1 -6.88 0.40 106.40 99.52 A A A C8 N9 C4 G G G 8 8 8 N 1 2.74 0.40 105.40 108.14 A A A N9 C4 C5 G G G 8 8 8 N 1 8.05 0.60 126.00 134.05 A A A N3 C4 N9 G G G 8 8 8 N 1 -4.91 0.60 128.60 123.69 A A A C5 C6 O6 G G G 8 8 8 N 1 -10.16 1.50 119.60 109.44 A A A OP1 P OP2 G G G 9 9 9 N 1 11.13 0.50 111.90 123.03 A A A C2 N3 C4 G G G 9 9 9 N 1 -10.81 0.50 128.60 117.79 A A A N3 C4 C5 G G G 9 9 9 N 1 3.77 0.50 111.50 115.27 A A A C5 C6 N1 G G G 9 9 9 N 1 2.62 0.40 110.80 113.42 A A A C4 C5 N7 G G G 9 9 9 N 1 -7.23 0.50 104.30 97.07 A A A C5 N7 C8 G G G 9 9 9 N 1 8.69 0.50 113.10 121.79 A A A N7 C8 N9 G G G 9 9 9 N 1 -6.89 0.40 106.40 99.51 A A A C8 N9 C4 G G G 9 9 9 N 1 2.77 0.40 105.40 108.17 A A A N9 C4 C5 G G G 9 9 9 N 1 8.03 0.60 126.00 134.03 A A A N3 C4 N9 G G G 9 9 9 N 1 -4.89 0.60 128.60 123.71 A A A C5 C6 O6 G G G 9 9 9 N 1 -10.13 1.50 119.60 109.47 A A A OP1 P OP2 A A A 10 10 10 N 1 5.13 0.50 110.60 115.73 A A A C2 N3 C4 A A A 10 10 10 N 1 -9.31 0.70 126.80 117.49 A A A N3 C4 C5 A A A 10 10 10 N 1 -6.30 0.50 103.90 97.60 A A A C5 N7 C8 A A A 10 10 10 N 1 8.25 0.50 113.80 122.05 A A A N7 C8 N9 A A A 10 10 10 N 1 -6.10 0.40 105.80 99.70 A A A C8 N9 C4 A A A 10 10 10 N 1 6.92 0.80 127.40 134.32 A A A N3 C4 N9 A A A 10 10 10 N 1 A A N3 C4 A A 2 2 0.121 0.006 1.344 1.465 N 1 A A C4 C5 A A 2 2 0.078 0.007 1.383 1.461 N 1 A A N7 C8 A A 2 2 0.067 0.007 1.311 1.378 N 1 A A N3 C4 A A 3 3 0.120 0.006 1.344 1.464 N 1 A A C4 C5 A A 3 3 0.076 0.007 1.383 1.459 N 1 A A N7 C8 A A 3 3 0.067 0.007 1.311 1.378 N 1 A A N3 C4 A A 4 4 0.122 0.006 1.344 1.466 N 1 A A C4 C5 A A 4 4 0.076 0.007 1.383 1.459 N 1 A A N7 C8 A A 4 4 0.067 0.007 1.311 1.378 N 1 A A N1 C2 G G 5 5 0.093 0.008 1.373 1.466 N 1 A A N3 C4 G G 5 5 0.096 0.007 1.350 1.446 N 1 A A C4 C5 G G 5 5 0.057 0.007 1.379 1.436 N 1 A A C5 C6 G G 5 5 0.133 0.010 1.419 1.552 N 1 A A N7 C8 G G 5 5 0.072 0.006 1.305 1.377 N 1 A A N1 C2 G G 6 6 0.093 0.008 1.373 1.466 N 1 A A N3 C4 G G 6 6 0.095 0.007 1.350 1.445 N 1 A A C4 C5 G G 6 6 0.057 0.007 1.379 1.436 N 1 A A C5 C6 G G 6 6 0.132 0.010 1.419 1.551 N 1 A A N7 C8 G G 6 6 0.071 0.006 1.305 1.376 N 1 A A N3 C4 A A 7 7 0.122 0.006 1.344 1.466 N 1 A A C4 C5 A A 7 7 0.076 0.007 1.383 1.459 N 1 A A N7 C8 A A 7 7 0.067 0.007 1.311 1.378 N 1 A A N1 C2 G G 8 8 0.093 0.008 1.373 1.466 N 1 A A N3 C4 G G 8 8 0.097 0.007 1.350 1.447 N 1 A A C4 C5 G G 8 8 0.057 0.007 1.379 1.436 N 1 A A C5 C6 G G 8 8 0.131 0.010 1.419 1.550 N 1 A A N7 C8 G G 8 8 0.072 0.006 1.305 1.377 N 1 A A N1 C2 G G 9 9 0.093 0.008 1.373 1.466 N 1 A A N3 C4 G G 9 9 0.096 0.007 1.350 1.446 N 1 A A C4 C5 G G 9 9 0.055 0.007 1.379 1.434 N 1 A A C5 C6 G G 9 9 0.130 0.010 1.419 1.549 N 1 A A N7 C8 G G 9 9 0.071 0.006 1.305 1.376 N 1 A A N3 C4 A A 10 10 0.122 0.006 1.344 1.466 N 1 A A C4 C5 A A 10 10 0.076 0.007 1.383 1.459 N 1 A A N7 C8 A A 10 10 0.067 0.007 1.311 1.378 N minimized average 5'(dCCPUPCPCPUPUP)3':3'(rAGGAGGAAA)5', where P=propynyl 1 N N 2 N N covale 1.620 both B 5PC 1 B O3' 5PC 1 1_555 B 5PC 2 B P 5PC 2 1_555 covale 1.624 both B 5PC 2 B O3' 5PC 2 1_555 B PDU 3 B P PDU 3 1_555 covale 1.623 one B PDU 3 B O3' PDU 3 1_555 B 5PC 4 B P 5PC 4 1_555 covale 1.628 both B 5PC 4 B O3' 5PC 4 1_555 B 5PC 5 B P 5PC 5 1_555 covale 1.626 both B 5PC 5 B O3' 5PC 5 1_555 B PDU 6 B P PDU 6 1_555 covale 1.625 one B PDU 6 B O3' PDU 6 1_555 B PDU 7 B P PDU 7 1_555 hydrog WATSON-CRICK A A 3 A N1 A 2 1_555 B PDU 7 B N3 PDU 7 1_555 hydrog WATSON-CRICK A A 3 A N6 A 2 1_555 B PDU 7 B O4 PDU 7 1_555 hydrog WATSON-CRICK A A 4 A N1 A 3 1_555 B PDU 6 B N3 PDU 6 1_555 hydrog WATSON-CRICK A A 4 A N6 A 3 1_555 B PDU 6 B O4 PDU 6 1_555 hydrog WATSON-CRICK A G 5 A N1 G 4 1_555 B 5PC 5 B N3 5PC 5 1_555 hydrog WATSON-CRICK A G 5 A N2 G 4 1_555 B 5PC 5 B O2 5PC 5 1_555 hydrog WATSON-CRICK A G 5 A O6 G 4 1_555 B 5PC 5 B N4 5PC 5 1_555 hydrog WATSON-CRICK A G 6 A N1 G 5 1_555 B 5PC 4 B N3 5PC 4 1_555 hydrog WATSON-CRICK A G 6 A N2 G 5 1_555 B 5PC 4 B O2 5PC 4 1_555 hydrog WATSON-CRICK A G 6 A O6 G 5 1_555 B 5PC 4 B N4 5PC 4 1_555 hydrog WATSON-CRICK A A 7 A N1 A 6 1_555 B PDU 3 B N3 PDU 3 1_555 hydrog WATSON-CRICK A A 7 A N6 A 6 1_555 B PDU 3 B O4 PDU 3 1_555 hydrog WATSON-CRICK A G 8 A N1 G 7 1_555 B 5PC 2 B N3 5PC 2 1_555 hydrog WATSON-CRICK A G 8 A N2 G 7 1_555 B 5PC 2 B O2 5PC 2 1_555 hydrog WATSON-CRICK A G 8 A O6 G 7 1_555 B 5PC 2 B N4 5PC 2 1_555 hydrog WATSON-CRICK A G 9 A N1 G 8 1_555 B 5PC 1 B N3 5PC 1 1_555 hydrog WATSON-CRICK A G 9 A N2 G 8 1_555 B 5PC 1 B O2 5PC 1 1_555 hydrog WATSON-CRICK A G 9 A O6 G 8 1_555 B 5PC 1 B N4 5PC 1 1_555 RNA/DNA DNA, RNA, hybrid, propynyl, RNA-DNA COMPLEX 1NTS PDB 1 1NTS 1NTS PDB 2 1NTS 2 10 1NTS 2 10 1NTS A 1 1 9 1 7 1NTS 1 7 1NTS B 2 1 7