0.00 6.856 -3.610 12.181 A O5' A 2 ATOM A O5' A 1 1 1.00 1 O 0.00 7.821 -4.475 12.771 A C5' A 2 ATOM A C5' A 1 1 1.00 1 C 0.00 7.173 -5.797 13.220 A C4' A 2 ATOM A C4' A 1 1 1.00 1 C 0.00 6.039 -5.536 14.066 A O4' A 2 ATOM A O4' A 1 1 1.00 1 O 0.00 6.650 -6.675 12.075 A C3' A 2 ATOM A C3' A 1 1 1.00 1 C 0.00 7.699 -7.506 11.536 A O3' A 2 ATOM A O3' A 1 1 1.00 1 O 0.00 5.563 -7.498 12.768 A C2' A 2 ATOM A C2' A 1 1 1.00 1 C 0.00 6.139 -8.663 13.353 A O2' A 2 ATOM A O2' A 1 1 1.00 1 O 0.00 5.031 -6.555 13.869 A C1' A 2 ATOM A C1' A 1 1 1.00 1 C 0.00 3.708 -5.937 13.517 A N9 A 2 ATOM A N9 A 1 1 1.00 1 N 0.00 3.342 -4.599 13.393 A C8 A 2 ATOM A C8 A 1 1 1.00 1 C 0.00 2.027 -4.200 13.285 A N7 A 2 ATOM A N7 A 1 1 1.00 1 N 0.00 1.451 -5.462 13.336 A C5 A 2 ATOM A C5 A 1 1 1.00 1 C 0.00 0.055 -5.851 13.304 A C6 A 2 ATOM A C6 A 1 1 1.00 1 C 0.00 -0.921 -4.954 13.217 A N6 A 2 ATOM A N6 A 1 1 1.00 1 N 0.00 -0.282 -7.125 13.363 A N1 A 2 ATOM A N1 A 1 1 1.00 1 N 0.00 0.652 -8.048 13.454 A C2 A 2 ATOM A C2 A 1 1 1.00 1 C 0.00 1.951 -7.905 13.513 A N3 A 2 ATOM A N3 A 1 1 1.00 1 N 0.00 2.444 -6.526 13.457 A C4 A 2 ATOM A C4 A 1 1 1.00 1 C 0.00 8.283 -3.969 13.639 A H5' A 2 ATOM A H5' A 1 1 1.00 1 H 0.00 8.640 -4.667 12.051 A H5'' A 2 ATOM A H5'' A 1 1 1.00 1 H 0.00 7.917 -6.374 13.803 A H4' A 2 ATOM A H4' A 1 1 1.00 1 H 0.00 6.187 -6.041 11.292 A H3' A 2 ATOM A H3' A 1 1 1.00 1 H 0.00 4.784 -7.812 12.050 A H2' A 2 ATOM A H2' A 1 1 1.00 1 H 0.00 6.893 -8.864 12.789 A HO2' A 2 ATOM A HO2' A 1 1 1.00 1 H 0.00 4.912 -7.119 14.814 A H1' A 2 ATOM A H1' A 1 1 1.00 1 H 0.00 4.105 -3.835 13.421 A H8 A 2 ATOM A H8 A 1 1 1.00 1 H 0.00 -1.876 -5.325 13.191 A H61 A 2 ATOM A H61 A 1 1 1.00 1 H 0.00 -0.634 -3.970 13.155 A H62 A 2 ATOM A H62 A 1 1 1.00 1 H 0.00 0.296 -9.068 13.481 A H2 A 2 ATOM A H2 A 1 1 1.00 1 H 0.00 6.077 -3.679 12.737 A HO5' A 2 ATOM A HO5' A 1 1 1.00 1 H 0.00 8.005 -7.615 9.949 A P A 3 ATOM A P A 1 2 1.00 1 P 0.00 9.335 -8.345 9.748 A OP1 A 3 ATOM A OP1 A 1 2 1.00 1 O 0.00 8.098 -6.210 9.353 A OP2 A 3 ATOM A OP2 A 1 2 1.00 1 O 0.00 6.814 -8.436 9.224 A O5' A 3 ATOM A O5' A 1 2 1.00 1 O 0.00 6.647 -9.858 9.380 A C5' A 3 ATOM A C5' A 1 2 1.00 1 C 0.00 5.169 -10.271 9.265 A C4' A 3 ATOM A C4' A 1 2 1.00 1 C 0.00 4.377 -9.574 10.251 A O4' A 3 ATOM A O4' A 1 2 1.00 1 O 0.00 4.501 -9.990 7.909 A C3' A 3 ATOM A C3' A 1 2 1.00 1 C 0.00 4.740 -11.034 6.944 A O3' A 3 ATOM A O3' A 1 2 1.00 1 O 0.00 3.027 -9.911 8.313 A C2' A 3 ATOM A C2' A 1 2 1.00 1 C 0.00 2.476 -11.223 8.413 A O2' A 3 ATOM A O2' A 1 2 1.00 1 O 0.00 3.078 -9.260 9.703 A C1' A 3 ATOM A C1' A 1 2 1.00 1 C 0.00 2.857 -7.779 9.644 A N9 A 3 ATOM A N9 A 1 2 1.00 1 N 0.00 3.757 -6.721 9.563 A C8 A 3 ATOM A C8 A 1 2 1.00 1 C 0.00 3.348 -5.405 9.585 A N7 A 3 ATOM A N7 A 1 2 1.00 1 N 0.00 1.983 -5.645 9.662 A C5 A 3 ATOM A C5 A 1 2 1.00 1 C 0.00 0.875 -4.715 9.711 A C6 A 3 ATOM A C6 A 1 2 1.00 1 C 0.00 1.063 -3.401 9.732 A N6 A 3 ATOM A N6 A 1 2 1.00 1 N 0.00 -0.364 -5.163 9.746 A N1 A 3 ATOM A N1 A 1 2 1.00 1 N 0.00 -0.601 -6.457 9.752 A C2 A 3 ATOM A C2 A 1 2 1.00 1 C 0.00 0.250 -7.448 9.734 A N3 A 3 ATOM A N3 A 1 2 1.00 1 N 0.00 1.664 -7.069 9.685 A C4 A 3 ATOM A C4 A 1 2 1.00 1 C 0.00 7.036 -10.184 10.363 A H5' A 3 ATOM A H5' A 1 2 1.00 1 H 0.00 7.255 -10.386 8.621 A H5'' A 3 ATOM A H5'' A 1 2 1.00 1 H 0.00 5.099 -11.356 9.475 A H4' A 3 ATOM A H4' A 1 2 1.00 1 H 0.00 4.837 -9.008 7.518 A H3' A 3 ATOM A H3' A 1 2 1.00 1 H 0.00 2.438 -9.331 7.584 A H2' A 3 ATOM A H2' A 1 2 1.00 1 H 0.00 2.929 -11.726 7.730 A HO2' A 3 ATOM A HO2' A 1 2 1.00 1 H 0.00 2.293 -9.705 10.339 A H1' A 3 ATOM A H1' A 1 2 1.00 1 H 0.00 4.813 -6.929 9.474 A H8 A 3 ATOM A H8 A 1 2 1.00 1 H 0.00 0.223 -2.812 9.776 A H61 A 3 ATOM A H61 A 1 2 1.00 1 H 0.00 2.037 -3.080 9.695 A H62 A 3 ATOM A H62 A 1 2 1.00 1 H 0.00 -1.644 -6.740 9.752 A H2 A 3 ATOM A H2 A 1 2 1.00 1 H 0.00 4.514 -10.808 5.352 A P A 4 ATOM A P A 1 3 1.00 1 P 0.00 4.952 -12.068 4.604 A OP1 A 4 ATOM A OP1 A 1 3 1.00 1 O 0.00 5.352 -9.618 4.884 A OP2 A 4 ATOM A OP2 A 1 3 1.00 1 O 0.00 2.945 -10.512 5.057 A O5' A 4 ATOM A O5' A 1 3 1.00 1 O 0.00 1.946 -11.550 5.074 A C5' A 4 ATOM A C5' A 1 3 1.00 1 C 0.00 0.518 -10.976 5.149 A C4' A 4 ATOM A C4' A 1 3 1.00 1 C 0.00 0.381 -10.069 6.263 A O4' A 4 ATOM A O4' A 1 3 1.00 1 O 0.00 0.065 -10.184 3.917 A C3' A 4 ATOM A C3' A 1 3 1.00 1 C 0.00 -0.360 -11.051 2.845 A O3' A 4 ATOM A O3' A 1 3 1.00 1 O 0.00 -1.066 -9.328 4.502 A C2' A 4 ATOM A C2' A 1 3 1.00 1 C 0.00 -2.305 -10.035 4.524 A O2' A 4 ATOM A O2' A 1 3 1.00 1 O 0.00 -0.593 -9.052 5.943 A C1' A 4 ATOM A C1' A 1 3 1.00 1 C 0.00 -0.011 -7.677 6.068 A N9 A 4 ATOM A N9 A 1 3 1.00 1 N 0.00 1.301 -7.227 5.956 A C8 A 4 ATOM A C8 A 1 3 1.00 1 C 0.00 1.618 -5.884 5.968 A N7 A 4 ATOM A N7 A 1 3 1.00 1 N 0.00 0.326 -5.393 6.111 A C5 A 4 ATOM A C5 A 1 3 1.00 1 C 0.00 -0.147 -4.029 6.236 A C6 A 4 ATOM A C6 A 1 3 1.00 1 C 0.00 0.681 -2.992 6.183 A N6 A 4 ATOM A N6 A 1 3 1.00 1 N 0.00 -1.430 -3.786 6.417 A N1 A 4 ATOM A N1 A 1 3 1.00 1 N 0.00 -2.291 -4.780 6.469 A C2 A 4 ATOM A C2 A 1 3 1.00 1 C 0.00 -2.070 -6.065 6.371 A N3 A 4 ATOM A N3 A 1 3 1.00 1 N 0.00 -0.670 -6.457 6.185 A C4 A 4 ATOM A C4 A 1 3 1.00 1 C 0.00 2.112 -12.220 5.938 A H5' A 4 ATOM A H5' A 1 3 1.00 1 H 0.00 2.055 -12.185 4.175 A H5'' A 4 ATOM A H5'' A 1 3 1.00 1 H 0.00 -0.183 -11.819 5.302 A H4' A 4 ATOM A H4' A 1 3 1.00 1 H 0.00 0.890 -9.525 3.575 A H3' A 4 ATOM A H3' A 1 3 1.00 1 H 0.00 -1.201 -8.407 3.909 A H2' A 4 ATOM A H2' A 1 3 1.00 1 H 0.00 -2.660 -9.954 3.633 A HO2' A 4 ATOM A HO2' A 1 3 1.00 1 H 0.00 -1.442 -9.140 6.649 A H1' A 4 ATOM A H1' A 1 3 1.00 1 H 0.00 2.104 -7.949 5.886 A H8 A 4 ATOM A H8 A 1 3 1.00 1 H 0.00 0.265 -2.060 6.292 A H61 A 4 ATOM A H61 A 1 3 1.00 1 H 0.00 1.673 -3.211 6.040 A H62 A 4 ATOM A H62 A 1 3 1.00 1 H 0.00 -3.324 -4.494 6.602 A H2 A 4 ATOM A H2 A 1 3 1.00 1 H 0.00 -0.610 -10.516 1.335 A P G 5 ATOM A P G 1 4 1.00 1 P 0.00 -0.759 -11.715 0.396 A OP1 G 5 ATOM A OP1 G 1 4 1.00 1 O 0.00 0.576 -9.661 0.889 A OP2 G 5 ATOM A OP2 G 1 4 1.00 1 O 0.00 -1.960 -9.621 1.296 A O5' G 5 ATOM A O5' G 1 4 1.00 1 O 0.00 -3.272 -10.207 1.366 A C5' G 5 ATOM A C5' G 1 4 1.00 1 C 0.00 -4.348 -9.149 1.670 A C4' G 5 ATOM A C4' G 1 4 1.00 1 C 0.00 -4.005 -8.361 2.829 A O4' G 5 ATOM A O4' G 1 4 1.00 1 O 0.00 -4.625 -8.143 0.544 A C3' G 5 ATOM A C3' G 1 4 1.00 1 C 0.00 -5.508 -8.686 -0.458 A O3' G 5 ATOM A O3' G 1 4 1.00 1 O 0.00 -5.265 -6.989 1.323 A C2' G 5 ATOM A C2' G 1 4 1.00 1 C 0.00 -6.648 -7.255 1.548 A O2' G 5 ATOM A O2' G 1 4 1.00 1 O 0.00 -4.498 -7.010 2.659 A C1' G 5 ATOM A C1' G 1 4 1.00 1 C 0.00 -3.363 -6.031 2.662 A N9 G 5 ATOM A N9 G 1 4 1.00 1 N 0.00 -2.021 -6.211 2.363 A C8 G 5 ATOM A C8 G 1 4 1.00 1 C 0.00 -1.112 -5.180 2.447 A N7 G 5 ATOM A N7 G 1 4 1.00 1 N 0.00 -2.009 -4.194 2.814 A C5 G 5 ATOM A C5 G 1 4 1.00 1 C 0.00 -1.697 -2.696 3.068 A C6 G 5 ATOM A C6 G 1 4 1.00 1 C 0.00 -0.568 -2.213 3.008 A O6 G 5 ATOM A O6 G 1 4 1.00 1 O 0.00 -2.777 -1.922 3.365 A N1 G 5 ATOM A N1 G 1 4 1.00 1 N 0.00 -4.146 -2.446 3.419 A C2 G 5 ATOM A C2 G 1 4 1.00 1 C 0.00 -5.205 -1.564 3.617 A N2 G 5 ATOM A N2 G 1 4 1.00 1 N 0.00 -4.387 -3.704 3.252 A N3 G 5 ATOM A N3 G 1 4 1.00 1 N 0.00 -3.360 -4.669 2.932 A C4 G 5 ATOM A C4 G 1 4 1.00 1 C 0.00 -3.295 -10.991 2.146 A H5' G 5 ATOM A H5' G 1 4 1.00 1 H 0.00 -3.500 -10.724 0.415 A H5'' G 5 ATOM A H5'' G 1 4 1.00 1 H 0.00 -5.286 -9.682 1.897 A H4' G 5 ATOM A H4' G 1 4 1.00 1 H 0.00 -3.668 -7.811 0.091 A H3' G 5 ATOM A H3' G 1 4 1.00 1 H 0.00 -5.172 -6.032 0.778 A H2' G 5 ATOM A H2' G 1 4 1.00 1 H 0.00 -6.936 -7.719 0.756 A HO2' G 5 ATOM A HO2' G 1 4 1.00 1 H 0.00 -5.181 -6.766 3.496 A H1' G 5 ATOM A H1' G 1 4 1.00 1 H 0.00 -1.697 -7.185 2.020 A H8 G 5 ATOM A H8 G 1 4 1.00 1 H 0.00 -2.572 -0.927 3.500 A H1 G 5 ATOM A H1 G 1 4 1.00 1 H 0.00 -4.999 -0.564 3.721 A H21 G 5 ATOM A H21 G 1 4 1.00 1 H 0.00 -6.155 -1.946 3.632 A H22 G 5 ATOM A H22 G 1 4 1.00 1 H 0.00 -5.589 -8.086 -1.963 A P G 6 ATOM A P G 1 5 1.00 1 P 0.00 -6.462 -9.007 -2.819 A OP1 G 6 ATOM A OP1 G 1 5 1.00 1 O 0.00 -4.185 -8.011 -2.561 A OP2 G 6 ATOM A OP2 G 1 5 1.00 1 O 0.00 -6.237 -6.602 -1.921 A O5' G 6 ATOM A O5' G 1 5 1.00 1 O 0.00 -7.644 -6.385 -1.708 A C5' G 6 ATOM A C5' G 1 5 1.00 1 C 0.00 -7.953 -4.913 -1.384 A C4' G 6 ATOM A C4' G 1 5 1.00 1 C 0.00 -7.189 -4.464 -0.244 A O4' G 6 ATOM A O4' G 1 5 1.00 1 O 0.00 -7.648 -3.912 -2.508 A C3' G 6 ATOM A C3' G 1 5 1.00 1 C 0.00 -8.704 -3.853 -3.488 A O3' G 6 ATOM A O3' G 1 5 1.00 1 O 0.00 -7.512 -2.607 -1.720 A C2' G 6 ATOM A C2' G 1 5 1.00 1 C 0.00 -8.802 -2.054 -1.464 A O2' G 6 ATOM A O2' G 1 5 1.00 1 O 0.00 -6.860 -3.064 -0.401 A C1' G 6 ATOM A C1' G 1 5 1.00 1 C 0.00 -5.375 -2.859 -0.418 A N9 G 6 ATOM A N9 G 1 5 1.00 1 N 0.00 -4.340 -3.731 -0.737 A C8 G 6 ATOM A C8 G 1 5 1.00 1 C 0.00 -3.022 -3.344 -0.678 A N7 G 6 ATOM A N7 G 1 5 1.00 1 N 0.00 -3.246 -2.037 -0.292 A C5 G 6 ATOM A C5 G 1 5 1.00 1 C 0.00 -2.174 -0.950 -0.032 A C6 G 6 ATOM A C6 G 1 5 1.00 1 C 0.00 -0.967 -1.155 -0.127 A O6 G 6 ATOM A O6 G 1 5 1.00 1 O 0.00 -2.658 0.274 0.310 A N1 G 6 ATOM A N1 G 1 5 1.00 1 N 0.00 -4.091 0.568 0.407 A C2 G 6 ATOM A C2 G 1 5 1.00 1 C 0.00 -4.501 1.872 0.686 A N2 G 6 ATOM A N2 G 1 5 1.00 1 N 0.00 -4.976 -0.354 0.216 A N3 G 6 ATOM A N3 G 1 5 1.00 1 N 0.00 -4.636 -1.714 -0.145 A C4 G 6 ATOM A C4 G 1 5 1.00 1 C 0.00 -8.005 -7.022 -0.880 A H5' G 6 ATOM A H5' G 1 5 1.00 1 H 0.00 -8.209 -6.704 -2.605 A H5'' G 6 ATOM A H5'' G 1 5 1.00 1 H 0.00 -9.027 -4.839 -1.127 A H4' G 6 ATOM A H4' G 1 5 1.00 1 H 0.00 -6.679 -4.167 -2.985 A H3' G 6 ATOM A H3' G 1 5 1.00 1 H 0.00 -6.909 -1.864 -2.273 A H2' G 6 ATOM A H2' G 1 5 1.00 1 H 0.00 -9.326 -2.302 -2.231 A HO2' G 6 ATOM A HO2' G 1 5 1.00 1 H 0.00 -7.287 -2.498 0.449 A H1' G 6 ATOM A H1' G 1 5 1.00 1 H 0.00 -4.570 -4.735 -1.067 A H8 G 6 ATOM A H8 G 1 5 1.00 1 H 0.00 -1.943 0.995 0.456 A H1 G 6 ATOM A H1 G 1 5 1.00 1 H 0.00 -3.790 2.602 0.803 A H21 G 6 ATOM A H21 G 1 5 1.00 1 H 0.00 -5.507 2.058 0.741 A H22 G 6 ATOM A H22 G 1 5 1.00 1 H 0.00 -8.456 -3.307 -4.996 A P A 7 ATOM A P A 1 6 1.00 1 P 0.00 -9.734 -3.507 -5.814 A OP1 A 7 ATOM A OP1 A 1 6 1.00 1 O 0.00 -7.309 -4.085 -5.641 A OP2 A 7 ATOM A OP2 A 1 6 1.00 1 O 0.00 -8.079 -1.731 -4.949 A O5' A 7 ATOM A O5' A 1 6 1.00 1 O 0.00 -9.064 -0.715 -4.687 A C5' A 7 ATOM A C5' A 1 6 1.00 1 C 0.00 -8.418 0.631 -4.317 A C4' A 7 ATOM A C4' A 1 6 1.00 1 C 0.00 -7.512 0.483 -3.202 A O4' A 7 ATOM A O4' A 1 6 1.00 1 O 0.00 -7.595 1.300 -5.427 A C3' A 7 ATOM A C3' A 1 6 1.00 1 C 0.00 -8.421 2.005 -6.375 A O3' A 7 ATOM A O3' A 1 6 1.00 1 O 0.00 -6.707 2.241 -4.608 A C2' A 7 ATOM A C2' A 1 6 1.00 1 C 0.00 -7.423 3.428 -4.275 A O2' A 7 ATOM A O2' A 1 6 1.00 1 O 0.00 -6.420 1.423 -3.335 A C1' A 7 ATOM A C1' A 1 6 1.00 1 C 0.00 -5.101 0.715 -3.420 A N9 A 7 ATOM A N9 A 1 6 1.00 1 N 0.00 -4.786 -0.584 -3.809 A C8 A 7 ATOM A C8 A 1 6 1.00 1 C 0.00 -3.486 -1.040 -3.852 A N7 A 7 ATOM A N7 A 1 6 1.00 1 N 0.00 -2.867 0.137 -3.452 A C5 A 7 ATOM A C5 A 1 6 1.00 1 C 0.00 -1.461 0.436 -3.272 A C6 A 7 ATOM A C6 A 1 6 1.00 1 C 0.00 -0.523 -0.486 -3.467 A N6 A 7 ATOM A N6 A 1 6 1.00 1 N 0.00 -1.081 1.644 -2.901 A N1 A 7 ATOM A N1 A 1 6 1.00 1 N 0.00 -1.978 2.585 -2.700 A C2 A 7 ATOM A C2 A 1 6 1.00 1 C 0.00 -3.281 2.514 -2.795 A N3 A 7 ATOM A N3 A 1 6 1.00 1 N 0.00 -3.820 1.211 -3.195 A C4 A 7 ATOM A C4 A 1 6 1.00 1 C 0.00 -9.727 -1.036 -3.863 A H5' A 7 ATOM A H5' A 1 6 1.00 1 H 0.00 -9.718 -0.595 -5.572 A H5'' A 7 ATOM A H5'' A 1 6 1.00 1 H 0.00 -9.227 1.322 -4.012 A H4' A 7 ATOM A H4' A 1 6 1.00 1 H 0.00 -6.969 0.540 -5.940 A H3' A 7 ATOM A H3' A 1 6 1.00 1 H 0.00 -5.795 2.519 -5.165 A H2' A 7 ATOM A H2' A 1 6 1.00 1 H 0.00 -7.983 3.595 -5.039 A HO2' A 7 ATOM A HO2' A 1 6 1.00 1 H 0.00 -6.410 2.087 -2.449 A H1' A 7 ATOM A H1' A 1 6 1.00 1 H 0.00 -5.578 -1.254 -4.115 A H8 A 7 ATOM A H8 A 1 6 1.00 1 H 0.00 0.451 -0.214 -3.293 A H61 A 7 ATOM A H61 A 1 6 1.00 1 H 0.00 -0.858 -1.416 -3.744 A H62 A 7 ATOM A H62 A 1 6 1.00 1 H 0.00 -1.587 3.564 -2.461 A H2 A 7 ATOM A H2 A 1 6 1.00 1 H 0.00 -7.889 2.410 -7.855 A P G 8 ATOM A P G 1 7 1.00 1 P 0.00 -9.061 2.961 -8.671 A OP1 G 8 ATOM A OP1 G 1 7 1.00 1 O 0.00 -7.318 1.175 -8.553 A OP2 G 8 ATOM A OP2 G 1 7 1.00 1 O 0.00 -6.734 3.539 -7.728 A O5' G 8 ATOM A O5' G 1 7 1.00 1 O 0.00 -7.035 4.897 -7.357 A C5' G 8 ATOM A C5' G 1 7 1.00 1 C 0.00 -5.778 5.663 -6.909 A C4' G 8 ATOM A C4' G 1 7 1.00 1 C 0.00 -5.058 4.941 -5.889 A O4' G 8 ATOM A O4' G 1 7 1.00 1 O 0.00 -4.750 5.949 -8.012 A C3' G 8 ATOM A C3' G 1 7 1.00 1 C 0.00 -5.127 7.082 -8.822 A O3' G 8 ATOM A O3' G 1 7 1.00 1 O 0.00 -3.493 6.212 -7.178 A C2' G 8 ATOM A C2' G 1 7 1.00 1 C 0.00 -3.499 7.551 -6.687 A O2' G 8 ATOM A O2' G 1 7 1.00 1 O 0.00 -3.642 5.213 -6.011 A C1' G 8 ATOM A C1' G 1 7 1.00 1 C 0.00 -2.864 3.955 -6.258 A N9 G 8 ATOM A N9 G 1 7 1.00 1 N 0.00 -3.265 2.687 -6.664 A C8 G 8 ATOM A C8 G 1 7 1.00 1 C 0.00 -2.368 1.649 -6.792 A N7 G 8 ATOM A N7 G 1 7 1.00 1 N 0.00 -1.234 2.357 -6.444 A C5 G 8 ATOM A C5 G 1 7 1.00 1 C 0.00 0.222 1.823 -6.379 A C6 G 8 ATOM A C6 G 1 7 1.00 1 C 0.00 0.535 0.654 -6.599 A O6 G 8 ATOM A O6 G 1 7 1.00 1 O 0.00 1.165 2.752 -6.063 A N1 G 8 ATOM A N1 G 1 7 1.00 1 N 0.00 0.848 4.163 -5.818 A C2 G 8 ATOM A C2 G 1 7 1.00 1 C 0.00 1.885 5.072 -5.616 A N2 G 8 ATOM A N2 G 1 7 1.00 1 N 0.00 -0.372 4.584 -5.822 A N3 G 8 ATOM A N3 G 1 7 1.00 1 N 0.00 -1.497 3.736 -6.139 A C4 G 8 ATOM A C4 G 1 7 1.00 1 C 0.00 -7.775 4.909 -6.535 A H5' G 8 ATOM A H5' G 1 7 1.00 1 H 0.00 -7.519 5.417 -8.206 A H5'' G 8 ATOM A H5'' G 1 7 1.00 1 H 0.00 -6.109 6.629 -6.478 A H4' G 8 ATOM A H4' G 1 7 1.00 1 H 0.00 -4.609 5.043 -8.637 A H3' G 8 ATOM A H3' G 1 7 1.00 1 H 0.00 -2.574 6.059 -7.771 A H2' G 8 ATOM A H2' G 1 7 1.00 1 H 0.00 -3.947 8.057 -7.373 A HO2' G 8 ATOM A HO2' G 1 7 1.00 1 H 0.00 -3.281 5.665 -5.065 A H1' G 8 ATOM A H1' G 1 7 1.00 1 H 0.00 -4.303 2.510 -6.914 A H8 G 8 ATOM A H8 G 1 7 1.00 1 H 0.00 2.130 2.405 -6.058 A H1 G 8 ATOM A H1 G 1 7 1.00 1 H 0.00 2.853 4.730 -5.648 A H21 G 8 ATOM A H21 G 1 7 1.00 1 H 0.00 1.642 6.053 -5.453 A H22 G 8 ATOM A H22 G 1 7 1.00 1 H 0.00 -4.577 7.294 -10.334 A P G 9 ATOM A P G 1 8 1.00 1 P 0.00 -5.363 8.428 -10.995 A OP1 G 9 ATOM A OP1 G 1 8 1.00 1 O 0.00 -4.765 6.008 -11.138 A OP2 G 9 ATOM A OP2 G 1 8 1.00 1 O 0.00 -3.004 7.676 -10.294 A O5' G 9 ATOM A O5' G 1 8 1.00 1 O 0.00 -2.543 8.961 -9.842 A C5' G 9 ATOM A C5' G 1 8 1.00 1 C 0.00 -1.028 8.970 -9.582 A C4' G 9 ATOM A C4' G 1 8 1.00 1 C 0.00 -0.649 7.969 -8.618 A O4' G 9 ATOM A O4' G 1 8 1.00 1 O 0.00 -0.127 8.759 -10.809 A C3' G 9 ATOM A C3' G 1 8 1.00 1 C 0.00 0.088 9.981 -11.547 A O3' G 9 ATOM A O3' G 1 8 1.00 1 O 0.00 1.164 8.262 -10.152 A C2' G 9 ATOM A C2' G 1 8 1.00 1 C 0.00 1.930 9.371 -9.686 A O2' G 9 ATOM A O2' G 1 8 1.00 1 O 0.00 0.654 7.440 -8.955 A C1' G 9 ATOM A C1' G 1 8 1.00 1 C 0.00 0.548 5.987 -9.288 A N9 G 9 ATOM A N9 G 1 8 1.00 1 N 0.00 -0.564 5.230 -9.611 A C8 G 9 ATOM A C8 G 1 8 1.00 1 C 0.00 -0.492 3.865 -9.774 A N7 G 9 ATOM A N7 G 1 8 1.00 1 N 0.00 0.869 3.743 -9.558 A C5 G 9 ATOM A C5 G 1 8 1.00 1 C 0.00 1.709 2.441 -9.600 A C6 G 9 ATOM A C6 G 1 8 1.00 1 C 0.00 1.231 1.325 -9.790 A O6 G 9 ATOM A O6 G 1 8 1.00 1 O 0.00 3.047 2.610 -9.420 A N1 G 9 ATOM A N1 G 1 8 1.00 1 N 0.00 3.671 3.923 -9.228 A C2 G 9 ATOM A C2 G 1 8 1.00 1 C 0.00 5.061 4.016 -9.174 A N2 G 9 ATOM A N2 G 1 8 1.00 1 N 0.00 2.956 4.995 -9.141 A N3 G 9 ATOM A N3 G 1 8 1.00 1 N 0.00 1.519 4.998 -9.301 A C4 G 9 ATOM A C4 G 1 8 1.00 1 C 0.00 -3.071 9.245 -8.913 A H5' G 9 ATOM A H5' G 1 8 1.00 1 H 0.00 -2.806 9.733 -10.590 A H5'' G 9 ATOM A H5'' G 1 8 1.00 1 H 0.00 -0.781 9.942 -9.135 A H4' G 9 ATOM A H4' G 1 8 1.00 1 H 0.00 -0.554 7.969 -11.460 A H3' G 9 ATOM A H3' G 1 8 1.00 1 H 0.00 1.776 7.672 -10.858 A H2' G 9 ATOM A H2' G 1 8 1.00 1 H 0.00 1.631 10.111 -10.225 A HO2' G 9 ATOM A HO2' G 1 8 1.00 1 H 0.00 1.331 7.560 -8.087 A H1' G 9 ATOM A H1' G 1 8 1.00 1 H 0.00 -1.500 5.756 -9.754 A H8 G 9 ATOM A H8 G 1 8 1.00 1 H 0.00 3.600 1.750 -9.487 A H1 G 9 ATOM A H1 G 1 8 1.00 1 H 0.00 5.621 3.165 -9.290 A H21 G 9 ATOM A H21 G 1 8 1.00 1 H 0.00 5.475 4.943 -9.035 A H22 G 9 ATOM A H22 G 1 8 1.00 1 H 0.00 0.515 9.988 -13.112 A P A 10 ATOM A P A 1 9 1.00 1 P 0.00 0.723 11.432 -13.574 A OP1 A 10 ATOM A OP1 A 1 9 1.00 1 O 0.00 -0.589 9.341 -13.948 A OP2 A 10 ATOM A OP2 A 1 9 1.00 1 O 0.00 1.888 9.154 -13.316 A O5' A 10 ATOM A O5' A 1 9 1.00 1 O 0.00 3.179 9.666 -12.938 A C5' A 10 ATOM A C5' A 1 9 1.00 1 C 0.00 4.265 8.578 -13.042 A C4' A 10 ATOM A C4' A 1 9 1.00 1 C 0.00 3.971 7.481 -12.157 A O4' A 10 ATOM A O4' A 1 9 1.00 1 O 0.00 4.426 7.954 -14.437 A C3' A 10 ATOM A C3' A 1 9 1.00 1 C 0.00 5.264 8.736 -15.284 A O3' A 10 ATOM A O3' A 1 9 1.00 1 O 0.00 5.027 6.585 -14.117 A C2' A 10 ATOM A C2' A 1 9 1.00 1 C 0.00 6.442 6.691 -13.982 A O2' A 10 ATOM A O2' A 1 9 1.00 1 O 0.00 4.389 6.234 -12.755 A C1' A 10 ATOM A C1' A 1 9 1.00 1 C 0.00 3.223 5.304 -12.901 A N9 A 10 ATOM A N9 A 1 9 1.00 1 N 0.00 1.863 5.566 -13.051 A C8 A 10 ATOM A C8 A 1 9 1.00 1 C 0.00 0.934 4.557 -13.184 A N7 A 10 ATOM A N7 A 1 9 1.00 1 N 0.00 1.816 3.486 -13.110 A C5 A 10 ATOM A C5 A 1 9 1.00 1 C 0.00 1.559 2.060 -13.159 A C6 A 10 ATOM A C6 A 1 9 1.00 1 C 0.00 0.328 1.576 -13.280 A N6 A 10 ATOM A N6 A 1 9 1.00 1 N 0.00 2.554 1.199 -13.061 A N1 A 10 ATOM A N1 A 1 9 1.00 1 N 0.00 3.787 1.636 -12.915 A C2 A 10 ATOM A C2 A 1 9 1.00 1 C 0.00 4.224 2.867 -12.845 A N3 A 10 ATOM A N3 A 1 9 1.00 1 N 0.00 3.200 3.912 -12.940 A C4 A 10 ATOM A C4 A 1 9 1.00 1 C 0.00 3.147 10.053 -11.903 A H5' A 10 ATOM A H5' A 1 9 1.00 1 H 0.00 3.438 10.531 -13.577 A H5'' A 10 ATOM A H5'' A 1 9 1.00 1 H 0.00 5.231 9.018 -12.726 A H4' A 10 ATOM A H4' A 1 9 1.00 1 H 0.00 3.436 7.810 -14.913 A H3' A 10 ATOM A H3' A 1 9 1.00 1 H 0.00 4.779 9.546 -15.461 A HO3' A 10 ATOM A HO3' A 1 9 1.00 1 H 0.00 4.797 5.848 -14.911 A H2' A 10 ATOM A H2' A 1 9 1.00 1 H 0.00 6.696 7.379 -14.604 A HO2' A 10 ATOM A HO2' A 1 9 1.00 1 H 0.00 5.141 5.760 -12.094 A H1' A 10 ATOM A H1' A 1 9 1.00 1 H 0.00 1.517 6.590 -13.067 A H8 A 10 ATOM A H8 A 1 9 1.00 1 H 0.00 0.241 0.555 -13.260 A H61 A 10 ATOM A H61 A 1 9 1.00 1 H 0.00 -0.433 2.264 -13.311 A H62 A 10 ATOM A H62 A 1 9 1.00 1 H 0.00 4.544 0.870 -12.828 A H2 A 10 ATOM A H2 A 1 9 1.00 1 H 0.00 11.000 -4.115 -8.197 B O5' DC 1 ATOM B O5' DC 2 1 1.00 1 O 0.00 9.955 -3.879 -9.136 B C5' DC 1 ATOM B C5' DC 2 1 1.00 1 C 0.00 9.904 -2.390 -9.520 B C4' DC 1 ATOM B C4' DC 2 1 1.00 1 C 0.00 8.845 -2.154 -10.468 B O4' DC 1 ATOM B O4' DC 2 1 1.00 1 O 0.00 9.617 -1.461 -8.335 B C3' DC 1 ATOM B C3' DC 2 1 1.00 1 C 0.00 10.833 -1.114 -7.655 B O3' DC 1 ATOM B O3' DC 2 1 1.00 1 O 0.00 8.984 -0.261 -9.025 B C2' DC 1 ATOM B C2' DC 2 1 1.00 1 C 0.00 8.202 -0.885 -10.193 B C1' DC 1 ATOM B C1' DC 2 1 1.00 1 C 0.00 6.737 -1.048 -9.926 B N1 DC 1 ATOM B N1 DC 2 1 1.00 1 N 0.00 5.873 0.035 -10.057 B C2 DC 1 ATOM B C2 DC 2 1 1.00 1 C 0.00 6.294 1.161 -10.326 B O2 DC 1 ATOM B O2 DC 2 1 1.00 1 O 0.00 4.436 -0.208 -9.867 B N3 DC 1 ATOM B N3 DC 2 1 1.00 1 N 0.00 3.966 -1.383 -9.582 B C4 DC 1 ATOM B C4 DC 2 1 1.00 1 C 0.00 2.572 -1.514 -9.439 B N4 DC 1 ATOM B N4 DC 2 1 1.00 1 N 0.00 4.778 -2.473 -9.421 B C5 DC 1 ATOM B C5 DC 2 1 1.00 1 C 0.00 6.130 -2.371 -9.571 B C6 DC 1 ATOM B C6 DC 2 1 1.00 1 C 0.00 8.989 -4.206 -8.709 B H5' DC 1 ATOM B H5' DC 2 1 1.00 1 H 0.00 10.119 -4.500 -10.036 B H5'' DC 1 ATOM B H5'' DC 2 1 1.00 1 H 0.00 10.865 -2.105 -9.991 B H4' DC 1 ATOM B H4' DC 2 1 1.00 1 H 0.00 8.885 -1.934 -7.649 B H3' DC 1 ATOM B H3' DC 2 1 1.00 1 H 0.00 8.363 0.345 -8.341 B H2' DC 1 ATOM B H2' DC 2 1 1.00 1 H 0.00 9.770 0.412 -9.414 B H2'' DC 1 ATOM B H2'' DC 2 1 1.00 1 H 0.00 8.333 -0.246 -11.089 B H1' DC 1 ATOM B H1' DC 2 1 1.00 1 H 0.00 1.994 -0.670 -9.544 B H41 DC 1 ATOM B H41 DC 2 1 1.00 1 H 0.00 2.170 -2.423 -9.190 B H42 DC 1 ATOM B H42 DC 2 1 1.00 1 H 0.00 4.355 -3.446 -9.168 B H5 DC 1 ATOM B H5 DC 2 1 1.00 1 H 0.00 6.762 -3.249 -9.431 B H6 DC 1 ATOM B H6 DC 2 1 1.00 1 H 0.00 10.919 -3.432 -7.521 B HO5' DC 1 ATOM B HO5' DC 2 1 1.00 1 H 0.00 10.883 -0.818 -6.067 B P 5PC 2 HETATM B P 5PC 2 2 1.00 1 P 0.00 12.341 -0.711 -5.620 B OP1 5PC 2 HETATM B OP1 5PC 2 2 1.00 1 O 0.00 10.207 -1.976 -5.330 B OP2 5PC 2 HETATM B OP2 5PC 2 2 1.00 1 O 0.00 10.562 1.850 -6.201 B C5' 5PC 2 HETATM B C5' 5PC 2 2 1.00 1 C 0.00 10.105 0.561 -5.742 B O5' 5PC 2 HETATM B O5' 5PC 2 2 1.00 1 O 0.00 9.455 2.911 -6.036 B C4' 5PC 2 HETATM B C4' 5PC 2 2 1.00 1 C 0.00 8.303 2.500 -6.798 B O4' 5PC 2 HETATM B O4' 5PC 2 2 1.00 1 O 0.00 8.983 3.110 -4.583 B C3' 5PC 2 HETATM B C3' 5PC 2 2 1.00 1 C 0.00 9.654 4.181 -3.866 B O3' 5PC 2 HETATM B O3' 5PC 2 2 1.00 1 O 0.00 7.468 3.251 -4.683 B C2' 5PC 2 HETATM B C2' 5PC 2 2 1.00 1 C 0.00 7.086 2.854 -6.115 B C1' 5PC 2 HETATM B C1' 5PC 2 2 1.00 1 C 0.00 6.096 1.737 -6.142 B N1 5PC 2 HETATM B N1 5PC 2 2 1.00 1 N 0.00 4.735 1.990 -6.117 B C2 5PC 2 HETATM B C2 5PC 2 2 1.00 1 C 0.00 4.299 3.142 -6.090 B O2 5PC 2 HETATM B O2 5PC 2 2 1.00 1 O 0.00 3.826 0.841 -6.090 B N3 5PC 2 HETATM B N3 5PC 2 2 1.00 1 N 0.00 4.253 -0.385 -6.025 B C4 5PC 2 HETATM B C4 5PC 2 2 1.00 1 C 0.00 3.236 -1.374 -5.954 B N4 5PC 2 HETATM B N4 5PC 2 2 1.00 1 N 0.00 5.602 -0.690 -6.019 B C5 5PC 2 HETATM B C5 5PC 2 2 1.00 1 C 0.00 6.534 0.312 -6.066 B C6 5PC 2 HETATM B C6 5PC 2 2 1.00 1 C 0.00 6.169 -2.020 -5.966 B C7 5PC 2 HETATM B C7 5PC 2 2 1.00 1 C 0.00 6.649 -3.124 -5.927 B C8 5PC 2 HETATM B C8 5PC 2 2 1.00 1 C 0.00 7.214 -4.403 -5.885 B C9 5PC 2 HETATM B C9 5PC 2 2 1.00 1 C 0.00 10.860 1.791 -7.265 B H5' 5PC 2 HETATM B H5' 5PC 2 2 1.00 1 H 0.00 11.469 2.149 -5.641 B H5'' 5PC 2 HETATM B H5'' 5PC 2 2 1.00 1 H 0.00 9.816 3.871 -6.448 B H4' 5PC 2 HETATM B H4' 5PC 2 2 1.00 1 H 0.00 9.174 2.176 -4.019 B H3' 5PC 2 HETATM B H3' 5PC 2 2 1.00 1 H 0.00 7.004 2.601 -3.925 B H2' 5PC 2 HETATM B H2' 5PC 2 2 1.00 1 H 0.00 7.106 4.269 -4.476 B H2'' 5PC 2 HETATM B H2'' 5PC 2 2 1.00 1 H 0.00 6.675 3.743 -6.634 B H1' 5PC 2 HETATM B H1' 5PC 2 2 1.00 1 H 0.00 3.494 -2.361 -5.859 B H41 5PC 2 HETATM B H41 5PC 2 2 1.00 1 H 0.00 2.259 -1.057 -5.985 B H42 5PC 2 HETATM B H42 5PC 2 2 1.00 1 H 0.00 7.606 0.109 -6.039 B H6 5PC 2 HETATM B H6 5PC 2 2 1.00 1 H 0.00 8.264 -4.352 -5.541 B H91 5PC 2 HETATM B H91 5PC 2 2 1.00 1 H 0.00 6.658 -5.060 -5.194 B H92 5PC 2 HETATM B H92 5PC 2 2 1.00 1 H 0.00 7.207 -4.872 -6.885 B H93 5PC 2 HETATM B H93 5PC 2 2 1.00 1 H 0.00 9.478 5.796 -4.058 B P PDU 3 HETATM B P PDU 2 3 1.00 1 P 0.00 10.577 6.509 -3.269 B OP2 PDU 3 HETATM B OP2 PDU 2 3 1.00 1 O 0.00 9.608 6.163 -5.538 B OP1 PDU 3 HETATM B OP1 PDU 2 3 1.00 1 O 0.00 8.030 6.285 -3.511 B O5' PDU 3 HETATM B O5' PDU 2 3 1.00 1 O 0.00 7.571 6.042 -2.168 B C5' PDU 3 HETATM B C5' PDU 2 3 1.00 1 C 0.00 6.060 6.328 -2.071 B C4' PDU 3 HETATM B C4' PDU 2 3 1.00 1 C 0.00 5.335 5.468 -2.976 B O4' PDU 3 HETATM B O4' PDU 2 3 1.00 1 O 0.00 5.453 6.063 -0.685 B C3' PDU 3 HETATM B C3' PDU 2 3 1.00 1 C 0.00 5.569 7.191 0.204 B O3' PDU 3 HETATM B O3' PDU 2 3 1.00 1 O 0.00 4.001 5.767 -1.036 B C2' PDU 3 HETATM B C2' PDU 2 3 1.00 1 C 0.00 4.024 5.175 -2.446 B C1' PDU 3 HETATM B C1' PDU 2 3 1.00 1 C 0.00 3.717 3.712 -2.452 B N1 PDU 3 HETATM B N1 PDU 2 3 1.00 1 N 0.00 2.403 3.277 -2.565 B C2 PDU 3 HETATM B C2 PDU 2 3 1.00 1 C 0.00 1.445 4.050 -2.584 B O2 PDU 3 HETATM B O2 PDU 2 3 1.00 1 O 0.00 2.119 1.952 -2.649 B N3 PDU 3 HETATM B N3 PDU 2 3 1.00 1 N 0.00 3.043 0.956 -2.603 B C4 PDU 3 HETATM B C4 PDU 2 3 1.00 1 C 0.00 2.674 -0.214 -2.703 B O4 PDU 3 HETATM B O4 PDU 2 3 1.00 1 O 0.00 4.530 1.384 -2.420 B C5 PDU 3 HETATM B C5 PDU 2 3 1.00 1 C 0.00 5.596 0.426 -2.389 B C5A PDU 3 HETATM B C5A PDU 2 3 1.00 1 C 0.00 6.494 -0.377 -2.373 B C5B PDU 3 HETATM B C5B PDU 2 3 1.00 1 C 0.00 7.540 -1.307 -2.366 B C5M PDU 3 HETATM B C5M PDU 2 3 1.00 1 C 0.00 4.808 2.709 -2.318 B C6 PDU 3 HETATM B C6 PDU 2 3 1.00 1 C 0.00 8.133 6.680 -1.460 B H5' PDU 3 HETATM B H5' PDU 2 3 1.00 1 H 0.00 7.779 4.993 -1.880 B H5'' PDU 3 HETATM B H5'' PDU 2 3 1.00 1 H 0.00 5.876 7.381 -2.361 B H4' PDU 3 HETATM B H4' PDU 2 3 1.00 1 H 0.00 5.912 5.163 -0.228 B H3' PDU 3 HETATM B H3' PDU 2 3 1.00 1 H 0.00 3.382 6.679 -1.014 B H2'' PDU 3 HETATM B H2'' PDU 2 3 1.00 1 H 0.00 3.570 5.089 -0.293 B H2' PDU 3 HETATM B H2' PDU 2 3 1.00 1 H 0.00 3.288 5.717 -3.074 B H1' PDU 3 HETATM B H1' PDU 2 3 1.00 1 H 0.00 1.131 1.692 -2.731 B H3 PDU 3 HETATM B H3 PDU 2 3 1.00 1 H 0.00 7.150 -2.340 -2.407 B H71 PDU 3 HETATM B H71 PDU 2 3 1.00 1 H 0.00 8.203 -1.163 -3.240 B H72 PDU 3 HETATM B H72 PDU 2 3 1.00 1 H 0.00 8.155 -1.208 -1.453 B H73 PDU 3 HETATM B H73 PDU 2 3 1.00 1 H 0.00 5.826 3.064 -2.146 B H6 PDU 3 HETATM B H6 PDU 2 3 1.00 1 H 0.00 5.019 7.172 1.739 B P 5PC 4 HETATM B P 5PC 2 4 1.00 1 P 0.00 5.619 8.352 2.505 B OP1 5PC 4 HETATM B OP1 5PC 2 4 1.00 1 O 0.00 5.434 5.863 2.415 B OP2 5PC 4 HETATM B OP2 5PC 2 4 1.00 1 O 0.00 2.697 8.411 1.187 B C5' 5PC 4 HETATM B C5' 5PC 2 4 1.00 1 C 0.00 3.400 7.288 1.755 B O5' 5PC 4 HETATM B O5' 5PC 2 4 1.00 1 O 0.00 1.177 8.150 1.082 B C4' 5PC 4 HETATM B C4' 5PC 2 4 1.00 1 C 0.00 0.930 6.896 0.405 B O4' 5PC 4 HETATM B O4' 5PC 2 4 1.00 1 O 0.00 0.432 8.103 2.432 B C3' 5PC 4 HETATM B C3' 5PC 2 4 1.00 1 C 0.00 -0.782 8.879 2.343 B O3' 5PC 4 HETATM B O3' 5PC 2 4 1.00 1 O 0.00 0.122 6.620 2.607 B C2' 5PC 4 HETATM B C2' 5PC 2 4 1.00 1 C 0.00 0.010 6.093 1.172 B C1' 5PC 4 HETATM B C1' 5PC 2 4 1.00 1 C 0.00 0.343 4.643 1.057 B N1 5PC 4 HETATM B N1 5PC 2 4 1.00 1 N 0.00 -0.610 3.696 0.713 B C2 5PC 4 HETATM B C2 5PC 2 4 1.00 1 C 0.00 -1.788 4.003 0.528 B O2 5PC 4 HETATM B O2 5PC 2 4 1.00 1 O 0.00 -0.165 2.301 0.581 B N3 5PC 4 HETATM B N3 5PC 2 4 1.00 1 N 0.00 1.071 1.941 0.767 B C4 5PC 4 HETATM B C4 5PC 2 4 1.00 1 C 0.00 1.341 0.557 0.594 B N4 5PC 4 HETATM B N4 5PC 2 4 1.00 1 N 0.00 2.054 2.851 1.110 B C5 5PC 4 HETATM B C5 5PC 2 4 1.00 1 C 0.00 1.737 4.170 1.280 B C6 5PC 4 HETATM B C6 5PC 2 4 1.00 1 C 0.00 3.456 2.546 1.302 B C7 5PC 4 HETATM B C7 5PC 2 4 1.00 1 C 0.00 4.625 2.299 1.454 B C8 5PC 4 HETATM B C8 5PC 2 4 1.00 1 C 0.00 5.984 2.020 1.626 B C9 5PC 4 HETATM B C9 5PC 2 4 1.00 1 C 0.00 3.097 8.629 0.178 B H5' 5PC 4 HETATM B H5' 5PC 2 4 1.00 1 H 0.00 2.895 9.319 1.786 B H5'' 5PC 4 HETATM B H5'' 5PC 2 4 1.00 1 H 0.00 0.749 8.966 0.469 B H4' 5PC 4 HETATM B H4' 5PC 2 4 1.00 1 H 0.00 1.055 8.482 3.267 B H3' 5PC 4 HETATM B H3' 5PC 2 4 1.00 1 H 0.00 0.957 6.142 3.154 B H2' 5PC 4 HETATM B H2' 5PC 2 4 1.00 1 H 0.00 -0.794 6.434 3.190 B H2'' 5PC 4 HETATM B H2'' 5PC 2 4 1.00 1 H 0.00 -1.012 6.308 0.796 B H1' 5PC 4 HETATM B H1' 5PC 2 4 1.00 1 H 0.00 2.294 0.208 0.738 B H41 5PC 4 HETATM B H41 5PC 2 4 1.00 1 H 0.00 0.562 -0.068 0.345 B H42 5PC 4 HETATM B H42 5PC 2 4 1.00 1 H 0.00 2.483 4.915 1.573 B H6 5PC 4 HETATM B H6 5PC 2 4 1.00 1 H 0.00 6.408 1.549 0.720 B H91 5PC 4 HETATM B H91 5PC 2 4 1.00 1 H 0.00 6.549 2.949 1.823 B H92 5PC 4 HETATM B H92 5PC 2 4 1.00 1 H 0.00 6.144 1.334 2.477 B H93 5PC 4 HETATM B H93 5PC 2 4 1.00 1 H 0.00 -1.687 9.263 3.634 B P 5PC 5 HETATM B P 5PC 2 5 1.00 1 P 0.00 -2.607 10.432 3.274 B OP1 5PC 5 HETATM B OP1 5PC 2 5 1.00 1 O 0.00 -0.780 9.674 4.796 B OP2 5PC 5 HETATM B OP2 5PC 2 5 1.00 1 O 0.00 -3.734 7.562 3.319 B C5' 5PC 5 HETATM B C5' 5PC 2 5 1.00 1 C 0.00 -2.577 7.981 4.068 B O5' 5PC 5 HETATM B O5' 5PC 2 5 1.00 1 O 0.00 -4.178 6.132 3.679 B C4' 5PC 5 HETATM B C4' 5PC 2 5 1.00 1 C 0.00 -3.196 5.166 3.260 B O4' 5PC 5 HETATM B O4' 5PC 2 5 1.00 1 O 0.00 -4.407 5.860 5.175 B C3' 5PC 5 HETATM B C3' 5PC 2 5 1.00 1 C 0.00 -5.766 6.140 5.565 B O3' 5PC 5 HETATM B O3' 5PC 2 5 1.00 1 O 0.00 -4.051 4.378 5.315 B C2' 5PC 5 HETATM B C2' 5PC 2 5 1.00 1 C 0.00 -3.483 3.943 3.961 B C1' 5PC 5 HETATM B C1' 5PC 2 5 1.00 1 C 0.00 -2.289 3.056 4.072 B N1 5PC 5 HETATM B N1 5PC 2 5 1.00 1 N 0.00 -2.395 1.686 3.894 B C2 5PC 5 HETATM B C2 5PC 2 5 1.00 1 C 0.00 -3.483 1.147 3.687 B O2 5PC 5 HETATM B O2 5PC 2 5 1.00 1 O 0.00 -1.168 0.890 3.982 B N3 5PC 5 HETATM B N3 5PC 2 5 1.00 1 N 0.00 -0.011 1.417 4.247 B C4 5PC 5 HETATM B C4 5PC 2 5 1.00 1 C 0.00 1.073 0.498 4.293 B N4 5PC 5 HETATM B N4 5PC 2 5 1.00 1 N 0.00 0.143 2.775 4.461 B C5 5PC 5 HETATM B C5 5PC 2 5 1.00 1 C 0.00 -0.943 3.608 4.401 B C6 5PC 5 HETATM B C6 5PC 2 5 1.00 1 C 0.00 1.400 3.442 4.728 B C7 5PC 5 HETATM B C7 5PC 2 5 1.00 1 C 0.00 2.448 4.000 4.937 B C8 5PC 5 HETATM B C8 5PC 2 5 1.00 1 C 0.00 3.664 4.651 5.168 B C9 5PC 5 HETATM B C9 5PC 2 5 1.00 1 C 0.00 -3.525 7.617 2.233 B H5' 5PC 5 HETATM B H5' 5PC 2 5 1.00 1 H 0.00 -4.563 8.271 3.506 B H5'' 5PC 5 HETATM B H5'' 5PC 2 5 1.00 1 H 0.00 -5.118 5.926 3.129 B H4' 5PC 5 HETATM B H4' 5PC 2 5 1.00 1 H 0.00 -3.706 6.462 5.788 B H3' 5PC 5 HETATM B H3' 5PC 2 5 1.00 1 H 0.00 -3.328 4.261 6.141 B H2' 5PC 5 HETATM B H2' 5PC 2 5 1.00 1 H 0.00 -4.929 3.758 5.567 B H2'' 5PC 5 HETATM B H2'' 5PC 2 5 1.00 1 H 0.00 -4.295 3.431 3.405 B H1' 5PC 5 HETATM B H1' 5PC 2 5 1.00 1 H 0.00 2.016 0.840 4.504 B H41 5PC 5 HETATM B H41 5PC 2 5 1.00 1 H 0.00 0.877 -0.487 4.076 B H42 5PC 5 HETATM B H42 5PC 2 5 1.00 1 H 0.00 -0.862 4.681 4.589 B H6 5PC 5 HETATM B H6 5PC 2 5 1.00 1 H 0.00 4.474 4.197 4.568 B H91 5PC 5 HETATM B H91 5PC 2 5 1.00 1 H 0.00 3.601 5.717 4.881 B H92 5PC 5 HETATM B H92 5PC 2 5 1.00 1 H 0.00 3.952 4.597 6.233 B H93 5PC 5 HETATM B H93 5PC 2 5 1.00 1 H 0.00 -6.302 5.971 7.092 B P PDU 6 HETATM B P PDU 2 6 1.00 1 P 0.00 -5.243 6.479 8.073 B OP2 PDU 6 HETATM B OP2 PDU 2 6 1.00 1 O 0.00 -7.589 6.781 7.268 B OP1 PDU 6 HETATM B OP1 PDU 2 6 1.00 1 O 0.00 -6.601 4.405 7.389 B O5' PDU 6 HETATM B O5' PDU 2 6 1.00 1 O 0.00 -7.718 3.718 6.793 B C5' PDU 6 HETATM B C5' PDU 2 6 1.00 1 C 0.00 -7.594 2.187 6.914 B C4' PDU 6 HETATM B C4' PDU 2 6 1.00 1 C 0.00 -6.428 1.708 6.216 B O4' PDU 6 HETATM B O4' PDU 2 6 1.00 1 O 0.00 -7.459 1.647 8.342 B C3' PDU 6 HETATM B C3' PDU 2 6 1.00 1 C 0.00 -8.731 1.536 9.009 B O3' PDU 6 HETATM B O3' PDU 2 6 1.00 1 O 0.00 -6.826 0.284 8.084 B C2' PDU 6 HETATM B C2' PDU 2 6 1.00 1 C 0.00 -6.013 0.449 6.792 B C1' PDU 6 HETATM B C1' PDU 2 6 1.00 1 C 0.00 -4.538 0.386 7.024 B N1 PDU 6 HETATM B N1 PDU 2 6 1.00 1 N 0.00 -3.872 -0.828 6.924 B C2 PDU 6 HETATM B C2 PDU 2 6 1.00 1 C 0.00 -4.450 -1.893 6.702 B O2 PDU 6 HETATM B O2 PDU 2 6 1.00 1 O 0.00 -2.525 -0.893 7.087 B N3 PDU 6 HETATM B N3 PDU 2 6 1.00 1 N 0.00 -1.727 0.161 7.394 B C4 PDU 6 HETATM B C4 PDU 2 6 1.00 1 C 0.00 -0.515 -0.017 7.507 B O4 PDU 6 HETATM B O4 PDU 2 6 1.00 1 O 0.00 -2.427 1.541 7.571 B C5 PDU 6 HETATM B C5 PDU 2 6 1.00 1 C 0.00 -1.672 2.717 7.889 B C5A PDU 6 HETATM B C5A PDU 2 6 1.00 1 C 0.00 -1.038 3.709 8.146 B C5B PDU 6 HETATM B C5B PDU 2 6 1.00 1 C 0.00 -0.304 4.863 8.436 B C5M PDU 6 HETATM B C5M PDU 2 6 1.00 1 C 0.00 -3.771 1.610 7.393 B C6 PDU 6 HETATM B C6 PDU 2 6 1.00 1 C 0.00 -7.802 3.991 5.723 B H5' PDU 6 HETATM B H5' PDU 2 6 1.00 1 H 0.00 -8.656 4.060 7.270 B H5'' PDU 6 HETATM B H5'' PDU 2 6 1.00 1 H 0.00 -8.489 1.736 6.443 B H4' PDU 6 HETATM B H4' PDU 2 6 1.00 1 H 0.00 -6.763 2.281 8.929 B H3' PDU 6 HETATM B H3' PDU 2 6 1.00 1 H 0.00 -7.601 -0.493 7.948 B H2'' PDU 6 HETATM B H2'' PDU 2 6 1.00 1 H 0.00 -6.223 -0.028 8.948 B H2' PDU 6 HETATM B H2' PDU 2 6 1.00 1 H 0.00 -6.318 -0.345 6.081 B H1' PDU 6 HETATM B H1' PDU 2 6 1.00 1 H 0.00 -2.083 -1.811 6.975 B H3 PDU 6 HETATM B H3 PDU 2 6 1.00 1 H 0.00 0.615 4.909 7.824 B H71 PDU 6 HETATM B H71 PDU 2 6 1.00 1 H 0.00 -0.898 5.770 8.223 B H72 PDU 6 HETATM B H72 PDU 2 6 1.00 1 H 0.00 -0.009 4.889 9.501 B H73 PDU 6 HETATM B H73 PDU 2 6 1.00 1 H 0.00 -4.310 2.554 7.507 B H6 PDU 6 HETATM B H6 PDU 2 6 1.00 1 H 0.00 -8.868 1.076 10.561 B P PDU 7 HETATM B P PDU 2 7 1.00 1 P 0.00 -7.889 1.870 11.428 B OP2 PDU 7 HETATM B OP2 PDU 2 7 1.00 1 O 0.00 -10.298 1.329 11.045 B OP1 PDU 7 HETATM B OP1 PDU 2 7 1.00 1 O 0.00 -8.531 -0.503 10.695 B O5' PDU 7 HETATM B O5' PDU 2 7 1.00 1 O 0.00 -9.398 -1.526 10.172 B C5' PDU 7 HETATM B C5' PDU 2 7 1.00 1 C 0.00 -8.749 -2.921 10.259 B C4' PDU 7 HETATM B C4' PDU 2 7 1.00 1 C 0.00 -7.572 -2.990 9.431 B O4' PDU 7 HETATM B O4' PDU 2 7 1.00 1 O 0.00 -8.290 -3.344 11.662 B C3' PDU 7 HETATM B C3' PDU 2 7 1.00 1 C 0.00 -9.351 -3.899 12.429 B O3' PDU 7 HETATM B O3' PDU 2 7 1.00 1 O 0.00 -7.229 -4.390 11.337 B C2' PDU 7 HETATM B C2' PDU 2 7 1.00 1 C 0.00 -6.610 -3.897 10.020 B C1' PDU 7 HETATM B C1' PDU 2 7 1.00 1 C 0.00 -5.276 -3.239 10.182 B N1 PDU 7 HETATM B N1 PDU 2 7 1.00 1 N 0.00 -4.111 -3.931 9.877 B C2 PDU 7 HETATM B C2 PDU 2 7 1.00 1 C 0.00 -4.106 -5.109 9.519 B O2 PDU 7 HETATM B O2 PDU 2 7 1.00 1 O 0.00 -2.901 -3.319 9.968 B N3 PDU 7 HETATM B N3 PDU 2 7 1.00 1 N 0.00 -2.707 -2.026 10.339 B C4 PDU 7 HETATM B C4 PDU 2 7 1.00 1 C 0.00 -1.562 -1.580 10.393 B O4 PDU 7 HETATM B O4 PDU 2 7 1.00 1 O 0.00 -3.982 -1.191 10.661 B C5 PDU 7 HETATM B C5 PDU 2 7 1.00 1 C 0.00 -3.917 0.212 10.949 B C5A PDU 7 HETATM B C5A PDU 2 7 1.00 1 C 0.00 -3.869 1.393 11.181 B C5B PDU 7 HETATM B C5B PDU 2 7 1.00 1 C 0.00 -3.820 2.766 11.442 B C5M PDU 7 HETATM B C5M PDU 2 7 1.00 1 C 0.00 -5.186 -1.815 10.615 B C6 PDU 7 HETATM B C6 PDU 2 7 1.00 1 C 0.00 -9.652 -1.303 9.119 B H5' PDU 7 HETATM B H5' PDU 2 7 1.00 1 H 0.00 -10.356 -1.515 10.725 B H5'' PDU 7 HETATM B H5'' PDU 2 7 1.00 1 H 0.00 -9.477 -3.663 9.875 B H4' PDU 7 HETATM B H4' PDU 2 7 1.00 1 H 0.00 -7.826 -2.496 12.203 B H3' PDU 7 HETATM B H3' PDU 2 7 1.00 1 H 0.00 -9.955 -3.173 12.610 B H2 PDU 7 HETATM B H2 PDU 2 7 1.00 1 H 0.00 -7.703 -5.378 11.180 B H2'' PDU 7 HETATM B H2'' PDU 2 7 1.00 1 H 0.00 -6.483 -4.525 12.136 B H2' PDU 7 HETATM B H2' PDU 2 7 1.00 1 H 0.00 -6.527 -4.775 9.354 B H1' PDU 7 HETATM B H1' PDU 2 7 1.00 1 H 0.00 -2.073 -3.881 9.747 B H3 PDU 7 HETATM B H3 PDU 2 7 1.00 1 H 0.00 -3.215 2.981 12.341 B H71 PDU 7 HETATM B H71 PDU 2 7 1.00 1 H 0.00 -3.376 3.314 10.590 B H72 PDU 7 HETATM B H72 PDU 2 7 1.00 1 H 0.00 -4.837 3.169 11.608 B H73 PDU 7 HETATM B H73 PDU 2 7 1.00 1 H 0.00 -6.105 -1.279 10.863 B H6 PDU 7 HETATM B H6 PDU 2 7 1.00 1 H 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Znosko, B.M. Barnes III, T.W. Krugh, T.R. Turner, D.H. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C12 H16 N3 O7 P 345.245 n 5(1-PROPYNYL)-2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y ADENOSINE-5'-MONOPHOSPHATE RNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O8 P 363.221 y GUANOSINE-5'-MONOPHOSPHATE RNA linking C12 H15 N2 O8 P 346.230 5(1-PROPYNYL)-2'-DEOXYURIDINE-5-MONOPHOSPHATE DNA linking N 1 N O N 2 N P N 3 N O N 4 N O N 5 N C N 6 N O N 7 R C N 8 N O N 9 S C N 10 N O N 11 N C N 12 R C N 13 N N N 14 N C N 15 N O N 16 N N N 17 N C N 18 N N N 19 N C N 20 N C N 21 N C N 22 N C N 23 N C N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N O N 41 N P N 42 N O N 43 N O N 44 N O N 45 N C N 46 R C N 47 N O N 48 S C N 49 N O N 50 R C N 51 N O N 52 R C Y 53 N N Y 54 N C Y 55 N N Y 56 N C Y 57 N C N 58 N N Y 59 N N Y 60 N C Y 61 N N Y 62 N C N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N O N 78 N P N 79 N O N 80 N O N 81 N O N 82 N C N 83 R C N 84 N O N 85 S C N 86 N O N 87 N C N 88 R C N 89 N N N 90 N C N 91 N O N 92 N N N 93 N C N 94 N N N 95 N C N 96 N C N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N O N 112 N P N 113 N O N 114 N O N 115 N O N 116 N C N 117 R C N 118 N O N 119 S C N 120 N O N 121 R C N 122 N O N 123 R C Y 124 N N Y 125 N C Y 126 N N Y 127 N C N 128 N C N 129 N O N 130 N N N 131 N C N 132 N N N 133 N N Y 134 N C N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N P N 150 N O N 151 N O N 152 N O N 153 N C N 154 R C N 155 N O N 156 S C N 157 N O N 158 N C N 159 R C N 160 N N N 161 N C N 162 N O N 163 N N N 164 N C N 165 N O N 166 N C N 167 N C N 168 N C N 169 N C N 170 N C N 171 N O N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N doub N 27 N sing N 28 N doub N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N trip N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N doub N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing Y 65 N sing Y 66 N sing Y 67 N doub N 68 N sing Y 69 N sing Y 70 N sing Y 71 N doub N 72 N sing Y 73 N doub N 74 N sing N 75 N sing Y 76 N sing Y 77 N doub N 78 N sing Y 79 N sing N 80 N sing N 81 N sing N 82 N doub N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N doub N 106 N sing N 107 N doub N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N doub N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N doub N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing Y 139 N sing Y 140 N sing Y 141 N doub N 142 N sing Y 143 N sing N 144 N sing Y 145 N doub N 146 N doub N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N doub N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N doub N 157 N trip N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N doub N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N doub N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N doub N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing US J.Am.Chem.Soc. JACSAT 0004 0002-7863 125 6090 6097 10.1021/ja021285d 12785839 NMR Studies of DNA Single Strands and DNA:RNA Hybrids With and Without 1-Propynylation at C5 of Oligopyrimidines 2003 US J.Am.Chem.Soc. JACSAT 0004 0002-7863 123 4107 4118 10.1021/ja003208t Long-Range Cooperativity in Molecular Recognition of RNA by Oligodeoxynucleotides with Multiple C5-(1-Propynyl) Pyrimidines 2001 10.2210/pdb1ntt/pdb pdb_00001ntt 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 SINGLE WAVELENGTH M 1 1.0 2981.895 5'-R(*AP*AP*AP*GP*GP*AP*GP*GP*A)-3' 1 syn polymer 2210.558 5'-D(*CP*(5PC)P*(PDU)P*(5PC)P*(5PC)P*(PDU)P*(PDU))-3' 1 syn polymer no no AAAGGAGGA AAAGGAGGA A polyribonucleotide no yes (DC)(5PC)(PDU)(5PC)(5PC)(PDU)(PDU) CCXCCXX B polydeoxyribonucleotide n n n n n n n n n n n n n n n n -9.980 1 20 A 3 B 7 1.980 A_A3:PDU7_B 1 -13.535 -0.090 -0.242 0.279 0.482 1 20 A 4 B 6 3.526 A_A4:PDU6_B 2 -16.681 -0.297 0.524 0.261 4.032 1 19 A 5 B 5 1.148 A_G5:5PC5_B 3 -17.768 -1.383 0.352 -0.061 -2.769 1 19 A 6 B 4 -6.331 A_G6:5PC4_B 4 -14.332 -0.479 -0.305 0.132 3.255 1 20 A 7 B 3 -0.149 A_A7:PDU3_B 5 -14.110 -0.594 0.094 0.222 5.741 1 19 A 8 B 2 3.110 A_G8:5PC2_B 6 -16.352 -1.355 0.252 -0.032 -4.324 1 19 A 9 B 1 -0.610 A_G9:DC1_B 7 -22.792 -0.675 -0.460 0.057 2.980 30.203 A A 3 4 3.740 B B 7 6 3.130 1.942 0.428 -0.948 AA_A3A4:PDU6PDU7_BB 1 -4.077 7.853 29.871 -2.189 -1.599 3.242 29.327 A A 4 5 1.322 B B 6 5 3.293 0.668 -0.128 -1.084 AA_A4G5:5PC5PDU6_BB 2 2.786 -5.511 29.190 -2.285 0.853 3.489 36.443 A A 5 6 4.991 B B 5 4 3.658 3.113 -0.580 -0.960 AA_G5G6:5PC45PC5_BB 3 3.778 -6.058 36.124 -2.008 1.502 3.157 32.579 A A 6 7 4.491 B B 4 3 3.279 2.516 0.695 -0.947 AA_G6A7:PDU35PC4_BB 4 -1.779 3.176 32.437 -2.120 -1.544 3.083 28.518 A A 7 8 7.146 B B 3 2 3.306 3.509 0.278 -1.415 AA_A7G8:5PC2PDU3_BB 5 -2.091 4.259 28.230 -3.657 -1.032 3.430 40.137 A A 8 9 11.671 B B 2 1 3.698 7.959 -0.496 -0.964 AA_G8G9:DC15PC2_BB 6 1.221 -1.790 39.353 -2.403 0.876 atom_site chem_comp entity entity_poly pdbx_nmr_software pdbx_struct_assembly pdbx_struct_oper_list struct_conn chem_comp_atom chem_comp_bond database_2 repository Initial release Version format compliance Version format compliance Atomic model Data collection Derived calculations Non-polymer description Polymer sequence Structure summary Data collection Database references 1 0 2003-06-10 1 1 2008-04-29 1 2 2011-07-13 2 0 2021-07-28 2 1 2024-05-01 _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.auth_atom_id _atom_site.label_atom_id _chem_comp.formula _chem_comp.formula_weight _chem_comp.mon_nstd_flag _entity.formula_weight _entity_poly.pdbx_seq_one_letter_code_can _pdbx_nmr_software.name _struct_conn.pdbx_leaving_atom_flag _database_2.pdbx_DOI _database_2.pdbx_database_accession DNA:RNA hybrid with same sequence DNA:RNA hybrid with propynylated bases 1-7 in DNA strand RCSB Y RCSB 2003-01-30 REL REL 1 2D NOESY 80 mM NaCl 7.0 ambient 273 K 80 mM NaCl 7.0 ambient 303 K The structure is based on a total of 160 interproton distance restraints, 18 hydrogen bond restraints, and 59 dihedral angle restraints. simulated annealing, energy minimization 1 minimized average structure ~1mM hybrid, 80 mM NaCl, 10 mM phosphate buffer, 0.5 mM EDTA, 90% H2O, 10% D2O 90% H2O/10% D2O ~2.5 mM hybrid, 80 mM NaCl, 10 mM phosphate, 0.5 mM EDTA, 99.996% D2O 99.996% D2O Varian collection VNMR 5.2 MSI data analysis Felix 2000 MSI structure solution Discover 95.0 MSI refinement Discover 95.0 500 Varian INOVA A 2 n 1 A 2 A A 3 n 2 A 3 A A 4 n 3 A 4 A G 5 n 4 G 5 A G 6 n 5 G 6 A A 7 n 6 A 7 A G 8 n 7 G 8 A G 9 n 8 G 9 A A 10 n 9 A 10 A C 1 n 1 DC 1 B 5PC 2 n 2 5PC 2 B PDU 3 n 3 PDU 3 B 5PC 4 n 4 5PC 4 B 5PC 5 n 5 5PC 5 B PDU 6 n 6 PDU 6 B PDU 7 n 7 PDU 7 B author_defined_assembly 2 dimeric B 5PC 2 B 5PC 2 DC B PDU 3 B PDU 3 DU B 5PC 4 B 5PC 4 DC B 5PC 5 B 5PC 5 DC B PDU 6 B PDU 6 DU B PDU 7 B PDU 7 DU 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 identity operation 0.0000000000 0.0000000000 0.0000000000 1 A A 2 0.063 SIDE CHAIN 1 5.20 0.50 110.60 115.80 A A A C2 N3 C4 A A A 2 2 2 N 1 -9.41 0.70 126.80 117.39 A A A N3 C4 C5 A A A 2 2 2 N 1 -6.44 0.50 103.90 97.46 A A A C5 N7 C8 A A A 2 2 2 N 1 8.60 0.50 113.80 122.40 A A A N7 C8 N9 A A A 2 2 2 N 1 -6.38 0.40 105.80 99.42 A A A C8 N9 C4 A A A 2 2 2 N 1 7.03 0.80 127.40 134.43 A A A N3 C4 N9 A A A 2 2 2 N 1 -10.07 1.50 119.60 109.53 A A A OP1 P OP2 A A A 3 3 3 N 1 5.06 0.50 110.60 115.66 A A A C2 N3 C4 A A A 3 3 3 N 1 -9.16 0.70 126.80 117.64 A A A N3 C4 C5 A A A 3 3 3 N 1 -6.57 0.50 103.90 97.33 A A A C5 N7 C8 A A A 3 3 3 N 1 8.42 0.50 113.80 122.22 A A A N7 C8 N9 A A A 3 3 3 N 1 -6.09 0.40 105.80 99.71 A A A C8 N9 C4 A A A 3 3 3 N 1 6.86 0.80 127.40 134.26 A A A N3 C4 N9 A A A 3 3 3 N 1 -10.05 1.50 119.60 109.55 A A A OP1 P OP2 A A A 4 4 4 N 1 5.11 0.50 110.60 115.71 A A A C2 N3 C4 A A A 4 4 4 N 1 -9.20 0.70 126.80 117.60 A A A N3 C4 C5 A A A 4 4 4 N 1 -6.36 0.50 103.90 97.54 A A A C5 N7 C8 A A A 4 4 4 N 1 8.25 0.50 113.80 122.05 A A A N7 C8 N9 A A A 4 4 4 N 1 -6.03 0.40 105.80 99.77 A A A C8 N9 C4 A A A 4 4 4 N 1 6.83 0.80 127.40 134.23 A A A N3 C4 N9 A A A 4 4 4 N 1 -10.04 1.50 119.60 109.56 A A A OP1 P OP2 G G G 5 5 5 N 1 11.22 0.50 111.90 123.12 A A A C2 N3 C4 G G G 5 5 5 N 1 -10.85 0.50 128.60 117.75 A A A N3 C4 C5 G G G 5 5 5 N 1 3.66 0.50 111.50 115.16 A A A C5 C6 N1 G G G 5 5 5 N 1 2.53 0.40 110.80 113.33 A A A C4 C5 N7 G G G 5 5 5 N 1 -7.30 0.50 104.30 97.00 A A A C5 N7 C8 G G G 5 5 5 N 1 8.80 0.50 113.10 121.90 A A A N7 C8 N9 G G G 5 5 5 N 1 -6.78 0.40 106.40 99.62 A A A C8 N9 C4 G G G 5 5 5 N 1 2.68 0.40 105.40 108.08 A A A N9 C4 C5 G G G 5 5 5 N 1 8.15 0.60 126.00 134.15 A A A N3 C4 N9 G G G 5 5 5 N 1 -4.81 0.60 128.60 123.79 A A A C5 C6 O6 G G G 5 5 5 N 1 -10.04 1.50 119.60 109.56 A A A OP1 P OP2 G G G 6 6 6 N 1 11.22 0.50 111.90 123.12 A A A C2 N3 C4 G G G 6 6 6 N 1 -10.91 0.50 128.60 117.69 A A A N3 C4 C5 G G G 6 6 6 N 1 3.82 0.50 111.50 115.32 A A A C5 C6 N1 G G G 6 6 6 N 1 2.71 0.40 110.80 113.51 A A A C4 C5 N7 G G G 6 6 6 N 1 -7.24 0.50 104.30 97.06 A A A C5 N7 C8 G G G 6 6 6 N 1 8.72 0.50 113.10 121.82 A A A N7 C8 N9 G G G 6 6 6 N 1 -6.85 0.40 106.40 99.55 A A A C8 N9 C4 G G G 6 6 6 N 1 2.63 0.40 105.40 108.03 A A A N9 C4 C5 G G G 6 6 6 N 1 8.27 0.60 126.00 134.27 A A A N3 C4 N9 G G G 6 6 6 N 1 -3.61 0.60 130.40 126.79 A A A C6 C5 N7 G G G 6 6 6 N 1 -5.22 0.60 128.60 123.38 A A A C5 C6 O6 G G G 6 6 6 N 1 -10.06 1.50 119.60 109.54 A A A OP1 P OP2 A A A 7 7 7 N 1 5.14 0.50 110.60 115.74 A A A C2 N3 C4 A A A 7 7 7 N 1 -9.26 0.70 126.80 117.54 A A A N3 C4 C5 A A A 7 7 7 N 1 -6.37 0.50 103.90 97.53 A A A C5 N7 C8 A A A 7 7 7 N 1 8.26 0.50 113.80 122.06 A A A N7 C8 N9 A A A 7 7 7 N 1 -6.05 0.40 105.80 99.75 A A A C8 N9 C4 A A A 7 7 7 N 1 6.97 0.80 127.40 134.37 A A A N3 C4 N9 A A A 7 7 7 N 1 -10.13 1.50 119.60 109.47 A A A OP1 P OP2 G G G 8 8 8 N 1 11.16 0.50 111.90 123.06 A A A C2 N3 C4 G G G 8 8 8 N 1 -10.72 0.50 128.60 117.88 A A A N3 C4 C5 G G G 8 8 8 N 1 3.64 0.50 111.50 115.14 A A A C5 C6 N1 G G G 8 8 8 N 1 2.48 0.40 110.80 113.28 A A A C4 C5 N7 G G G 8 8 8 N 1 -7.12 0.50 104.30 97.18 A A A C5 N7 C8 G G G 8 8 8 N 1 8.66 0.50 113.10 121.76 A A A N7 C8 N9 G G G 8 8 8 N 1 -6.90 0.40 106.40 99.50 A A A C8 N9 C4 G G G 8 8 8 N 1 2.85 0.40 105.40 108.25 A A A N9 C4 C5 G G G 8 8 8 N 1 7.84 0.60 126.00 133.84 A A A N3 C4 N9 G G G 8 8 8 N 1 -4.67 0.60 128.60 123.93 A A A C5 C6 O6 G G G 8 8 8 N 1 -10.14 1.50 119.60 109.46 A A A OP1 P OP2 G G G 9 9 9 N 1 11.09 0.50 111.90 122.99 A A A C2 N3 C4 G G G 9 9 9 N 1 -10.72 0.50 128.60 117.88 A A A N3 C4 C5 G G G 9 9 9 N 1 3.65 0.50 111.50 115.15 A A A C5 C6 N1 G G G 9 9 9 N 1 2.53 0.40 110.80 113.33 A A A C4 C5 N7 G G G 9 9 9 N 1 -7.38 0.50 104.30 96.92 A A A C5 N7 C8 G G G 9 9 9 N 1 8.78 0.50 113.10 121.88 A A A N7 C8 N9 G G G 9 9 9 N 1 -6.58 0.40 106.40 99.82 A A A C8 N9 C4 G G G 9 9 9 N 1 2.54 0.40 105.40 107.94 A A A N9 C4 C5 G G G 9 9 9 N 1 8.16 0.60 126.00 134.16 A A A N3 C4 N9 G G G 9 9 9 N 1 -4.80 0.60 128.60 123.80 A A A C5 C6 O6 G G G 9 9 9 N 1 -10.18 1.50 119.60 109.42 A A A OP1 P OP2 A A A 10 10 10 N 1 5.12 0.50 110.60 115.72 A A A C2 N3 C4 A A A 10 10 10 N 1 -9.27 0.70 126.80 117.53 A A A N3 C4 C5 A A A 10 10 10 N 1 -6.35 0.50 103.90 97.55 A A A C5 N7 C8 A A A 10 10 10 N 1 8.26 0.50 113.80 122.06 A A A N7 C8 N9 A A A 10 10 10 N 1 -6.08 0.40 105.80 99.72 A A A C8 N9 C4 A A A 10 10 10 N 1 6.95 0.80 127.40 134.35 A A A N3 C4 N9 A A A 10 10 10 N 1 3.57 0.30 108.30 111.87 B B B O4' C1' N1 DC DC DC 1 1 1 N 1 -3.04 0.40 120.30 117.26 B B B C6 N1 C2 DC DC DC 1 1 1 N 1 3.63 0.50 117.40 121.03 B B B C4 C5 C6 DC DC DC 1 1 1 N 1 8.62 1.20 119.70 128.32 B B B C3' O3' P 5PC 5PC PDU 2 2 3 Y 1 A A N3 C4 A A 2 2 0.122 0.006 1.344 1.466 N 1 A A C4 C5 A A 2 2 0.077 0.007 1.383 1.460 N 1 A A N7 C8 A A 2 2 0.067 0.007 1.311 1.378 N 1 A A N3 C4 A A 3 3 0.121 0.006 1.344 1.465 N 1 A A C4 C5 A A 3 3 0.076 0.007 1.383 1.459 N 1 A A N7 C8 A A 3 3 0.067 0.007 1.311 1.378 N 1 A A N3 C4 A A 4 4 0.122 0.006 1.344 1.466 N 1 A A C4 C5 A A 4 4 0.076 0.007 1.383 1.459 N 1 A A N7 C8 A A 4 4 0.069 0.007 1.311 1.380 N 1 A A N1 C2 G G 5 5 0.094 0.008 1.373 1.467 N 1 A A N3 C4 G G 5 5 0.095 0.007 1.350 1.445 N 1 A A C4 C5 G G 5 5 0.058 0.007 1.379 1.437 N 1 A A C5 C6 G G 5 5 0.132 0.010 1.419 1.551 N 1 A A N7 C8 G G 5 5 0.072 0.006 1.305 1.377 N 1 A A N1 C2 G G 6 6 0.093 0.008 1.373 1.466 N 1 A A N3 C4 G G 6 6 0.098 0.007 1.350 1.448 N 1 A A C4 C5 G G 6 6 0.056 0.007 1.379 1.435 N 1 A A C5 C6 G G 6 6 0.130 0.010 1.419 1.549 N 1 A A N7 C8 G G 6 6 0.070 0.006 1.305 1.375 N 1 A A N3 C4 A A 7 7 0.122 0.006 1.344 1.466 N 1 A A C4 C5 A A 7 7 0.076 0.007 1.383 1.459 N 1 A A N7 C8 A A 7 7 0.067 0.007 1.311 1.378 N 1 A A N1 C2 G G 8 8 0.094 0.008 1.373 1.467 N 1 A A N3 C4 G G 8 8 0.094 0.007 1.350 1.444 N 1 A A C4 C5 G G 8 8 0.058 0.007 1.379 1.437 N 1 A A C5 C6 G G 8 8 0.133 0.010 1.419 1.552 N 1 A A N7 C8 G G 8 8 0.073 0.006 1.305 1.378 N 1 A A N1 C2 G G 9 9 0.093 0.008 1.373 1.466 N 1 A A N3 C4 G G 9 9 0.096 0.007 1.350 1.446 N 1 A A C4 C5 G G 9 9 0.058 0.007 1.379 1.437 N 1 A A C5 C6 G G 9 9 0.131 0.010 1.419 1.550 N 1 A A N7 C8 G G 9 9 0.072 0.006 1.305 1.377 N 1 A A N3 C4 A A 10 10 0.122 0.006 1.344 1.466 N 1 A A C4 C5 A A 10 10 0.075 0.007 1.383 1.458 N 1 A A N7 C8 A A 10 10 0.067 0.007 1.311 1.378 N 1 B B C4 N4 DC DC 1 1 0.072 0.009 1.335 1.407 N 1 B B N1 C6 DC DC 1 1 0.131 0.006 1.367 1.498 N 1 B B C2 N3 DC DC 1 1 0.117 0.008 1.353 1.470 N 1 B B C4 C5 DC DC 1 1 -0.056 0.008 1.425 1.369 N minimized average 5'(dCPCPUPCPCPUPUP)3':(rAGGAGGAAA)5', where P=propynyl 1 N N 2 N N covale 1.616 both B DC 1 B O3' DC 1 1_555 B 5PC 2 B P 5PC 2 1_555 covale 1.636 both B 5PC 2 B O3' 5PC 2 1_555 B PDU 3 B P PDU 3 1_555 covale 1.631 one B PDU 3 B O3' PDU 3 1_555 B 5PC 4 B P 5PC 4 1_555 covale 1.623 both B 5PC 4 B O3' 5PC 4 1_555 B 5PC 5 B P 5PC 5 1_555 covale 1.627 both B 5PC 5 B O3' 5PC 5 1_555 B PDU 6 B P PDU 6 1_555 covale 1.625 one B PDU 6 B O3' PDU 6 1_555 B PDU 7 B P PDU 7 1_555 hydrog WATSON-CRICK A A 3 A N1 A 2 1_555 B PDU 7 B N3 PDU 7 1_555 hydrog WATSON-CRICK A A 3 A N6 A 2 1_555 B PDU 7 B O4 PDU 7 1_555 hydrog WATSON-CRICK A A 4 A N1 A 3 1_555 B PDU 6 B N3 PDU 6 1_555 hydrog WATSON-CRICK A A 4 A N6 A 3 1_555 B PDU 6 B O4 PDU 6 1_555 hydrog WATSON-CRICK A G 5 A N1 G 4 1_555 B 5PC 5 B N3 5PC 5 1_555 hydrog WATSON-CRICK A G 5 A N2 G 4 1_555 B 5PC 5 B O2 5PC 5 1_555 hydrog WATSON-CRICK A G 5 A O6 G 4 1_555 B 5PC 5 B N4 5PC 5 1_555 hydrog WATSON-CRICK A G 6 A N1 G 5 1_555 B 5PC 4 B N3 5PC 4 1_555 hydrog WATSON-CRICK A G 6 A N2 G 5 1_555 B 5PC 4 B O2 5PC 4 1_555 hydrog WATSON-CRICK A G 6 A O6 G 5 1_555 B 5PC 4 B N4 5PC 4 1_555 hydrog WATSON-CRICK A A 7 A N1 A 6 1_555 B PDU 3 B N3 PDU 3 1_555 hydrog WATSON-CRICK A A 7 A N6 A 6 1_555 B PDU 3 B O4 PDU 3 1_555 hydrog WATSON-CRICK A G 8 A N1 G 7 1_555 B 5PC 2 B N3 5PC 2 1_555 hydrog WATSON-CRICK A G 8 A N2 G 7 1_555 B 5PC 2 B O2 5PC 2 1_555 hydrog WATSON-CRICK A G 8 A O6 G 7 1_555 B 5PC 2 B N4 5PC 2 1_555 hydrog WATSON-CRICK A G 9 A N1 G 8 1_555 B DC 1 B N3 DC 1 1_555 hydrog WATSON-CRICK A G 9 A N2 G 8 1_555 B DC 1 B O2 DC 1 1_555 hydrog WATSON-CRICK A G 9 A O6 G 8 1_555 B DC 1 B N4 DC 1 1_555 RNA/DNA DNA, RNA, hybrid, propynyl, RNA-DNA COMPLEX 1NTT PDB 1 1NTT 1NTT PDB 2 1NTT 2 10 1NTT 2 10 1NTT A 1 1 9 1 7 1NTT 1 7 1NTT B 2 1 7