0.017094
0.000000
0.000000
0.000000
0.016949
0.000000
0.000000
0.000000
0.014749
0.00000
0.00000
0.00000
Galkin, A.
Sarikaya, E.
Krajewski, W.
Howard, A.
Herzberg, O.
Structure 2 Function Project (S2F)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
58.5
59.0
67.8
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be Published
0353
Structure of yqgF from Escherichia coli, a hypothetical protein
10.2210/pdb1nu0/pdb
pdb_00001nu0
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2002-07-07
ADSC QUANTUM 4
Si(111) double crystal system
SINGLE WAVELENGTH
M
x-ray
1
0.97240
1.0
17-ID
APS
0.97240
SYNCHROTRON
APS BEAMLINE 17-ID
15394.912
Hypothetical protein yqgF
L6M, F134M
2
man
polymer
96.063
SULFATE ION
1
syn
non-polymer
18.015
water
248
nat
water
no
yes
(MSE)SGTL(MSE)AFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN(MSE)DGT
EQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIILESY(MSE)EQGY
MSGTLMAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFA
NRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIILESYMEQGY
A,B
yqgF
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Escherichia
Escherichia
sample
YQGF
562
Escherichia coli
562
Escherichia coli
BL21(DE3)Star
pET100/D-TOPO
pYQGFm
1
1.90
35.24
VAPOR DIFFUSION, HANGING DROP
5.25
24% polyethylene glycol monomethyl ether 2000, 0.2 M ammonium sulfate, 0.1 M sodium acetate, pH 5.25, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
Structure 2 Function Project
S2F
database_2
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
1
0
2004-03-02
1
1
2008-04-29
1
2
2011-07-13
1
3
2021-10-27
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
native protein
Y
RCSB
Y
RCSB
2003-01-30
REL
REL
SO4
SULFATE ION
HOH
water
SO4
1
2
SO4
SO4
301
A
TIP
3
3
HOH
HOH
302
A
TIP
4
3
HOH
HOH
303
A
TIP
8
3
HOH
HOH
304
A
TIP
10
3
HOH
HOH
305
A
TIP
12
3
HOH
HOH
306
A
TIP
15
3
HOH
HOH
307
A
TIP
16
3
HOH
HOH
308
A
TIP
19
3
HOH
HOH
309
A
TIP
20
3
HOH
HOH
310
A
TIP
21
3
HOH
HOH
311
A
TIP
22
3
HOH
HOH
312
A
TIP
23
3
HOH
HOH
313
A
TIP
24
3
HOH
HOH
314
A
TIP
25
3
HOH
HOH
315
A
TIP
26
3
HOH
HOH
316
A
TIP
27
3
HOH
HOH
317
A
TIP
29
3
HOH
HOH
318
A
TIP
30
3
HOH
HOH
319
A
TIP
31
3
HOH
HOH
320
A
TIP
32
3
HOH
HOH
321
A
TIP
34
3
HOH
HOH
322
A
TIP
35
3
HOH
HOH
323
A
TIP
37
3
HOH
HOH
324
A
TIP
40
3
HOH
HOH
325
A
TIP
41
3
HOH
HOH
326
A
TIP
42
3
HOH
HOH
327
A
TIP
44
3
HOH
HOH
328
A
TIP
45
3
HOH
HOH
329
A
TIP
48
3
HOH
HOH
330
A
TIP
49
3
HOH
HOH
331
A
TIP
50
3
HOH
HOH
332
A
TIP
52
3
HOH
HOH
333
A
TIP
53
3
HOH
HOH
334
A
TIP
54
3
HOH
HOH
335
A
TIP
55
3
HOH
HOH
336
A
TIP
57
3
HOH
HOH
337
A
TIP
58
3
HOH
HOH
338
A
TIP
60
3
HOH
HOH
339
A
TIP
61
3
HOH
HOH
340
A
TIP
64
3
HOH
HOH
341
A
TIP
67
3
HOH
HOH
342
A
TIP
69
3
HOH
HOH
343
A
TIP
70
3
HOH
HOH
344
A
TIP
72
3
HOH
HOH
345
A
TIP
75
3
HOH
HOH
346
A
TIP
76
3
HOH
HOH
347
A
TIP
78
3
HOH
HOH
348
A
TIP
81
3
HOH
HOH
349
A
TIP
84
3
HOH
HOH
350
A
TIP
86
3
HOH
HOH
351
A
TIP
88
3
HOH
HOH
352
A
TIP
89
3
HOH
HOH
353
A
TIP
91
3
HOH
HOH
354
A
TIP
92
3
HOH
HOH
355
A
TIP
93
3
HOH
HOH
356
A
TIP
94
3
HOH
HOH
357
A
TIP
95
3
HOH
HOH
358
A
TIP
96
3
HOH
HOH
359
A
TIP
98
3
HOH
HOH
360
A
TIP
99
3
HOH
HOH
361
A
TIP
101
3
HOH
HOH
362
A
TIP
105
3
HOH
HOH
363
A
TIP
106
3
HOH
HOH
364
A
TIP
107
3
HOH
HOH
365
A
TIP
109
3
HOH
HOH
366
A
TIP
110
3
HOH
HOH
367
A
TIP
111
3
HOH
HOH
368
A
TIP
112
3
HOH
HOH
369
A
TIP
113
3
HOH
HOH
370
A
TIP
116
3
HOH
HOH
371
A
TIP
117
3
HOH
HOH
372
A
TIP
119
3
HOH
HOH
373
A
TIP
120
3
HOH
HOH
374
A
TIP
122
3
HOH
HOH
375
A
TIP
123
3
HOH
HOH
376
A
TIP
125
3
HOH
HOH
377
A
TIP
128
3
HOH
HOH
378
A
TIP
129
3
HOH
HOH
379
A
TIP
130
3
HOH
HOH
380
A
TIP
131
3
HOH
HOH
381
A
TIP
132
3
HOH
HOH
382
A
TIP
133
3
HOH
HOH
383
A
TIP
135
3
HOH
HOH
384
A
TIP
136
3
HOH
HOH
385
A
TIP
137
3
HOH
HOH
386
A
TIP
139
3
HOH
HOH
387
A
TIP
140
3
HOH
HOH
388
A
TIP
141
3
HOH
HOH
389
A
TIP
143
3
HOH
HOH
390
A
TIP
144
3
HOH
HOH
391
A
TIP
145
3
HOH
HOH
392
A
TIP
147
3
HOH
HOH
393
A
TIP
148
3
HOH
HOH
394
A
TIP
149
3
HOH
HOH
395
A
TIP
150
3
HOH
HOH
396
A
TIP
152
3
HOH
HOH
397
A
TIP
153
3
HOH
HOH
398
A
TIP
155
3
HOH
HOH
399
A
TIP
156
3
HOH
HOH
400
A
TIP
160
3
HOH
HOH
401
A
TIP
161
3
HOH
HOH
402
A
TIP
162
3
HOH
HOH
403
A
TIP
163
3
HOH
HOH
404
A
TIP
164
3
HOH
HOH
405
A
TIP
166
3
HOH
HOH
406
A
TIP
167
3
HOH
HOH
407
A
TIP
173
3
HOH
HOH
408
A
TIP
174
3
HOH
HOH
409
A
TIP
176
3
HOH
HOH
410
A
TIP
178
3
HOH
HOH
411
A
TIP
179
3
HOH
HOH
412
A
TIP
180
3
HOH
HOH
413
A
TIP
182
3
HOH
HOH
414
A
TIP
183
3
HOH
HOH
415
A
TIP
184
3
HOH
HOH
416
A
TIP
185
3
HOH
HOH
417
A
TIP
186
3
HOH
HOH
418
A
TIP
189
3
HOH
HOH
419
A
TIP
190
3
HOH
HOH
420
A
TIP
192
3
HOH
HOH
421
A
TIP
194
3
HOH
HOH
422
A
TIP
195
3
HOH
HOH
423
A
TIP
196
3
HOH
HOH
424
A
TIP
197
3
HOH
HOH
425
A
TIP
198
3
HOH
HOH
426
A
TIP
200
3
HOH
HOH
427
A
TIP
201
3
HOH
HOH
428
A
TIP
202
3
HOH
HOH
429
A
TIP
203
3
HOH
HOH
430
A
TIP
204
3
HOH
HOH
431
A
TIP
207
3
HOH
HOH
432
A
TIP
208
3
HOH
HOH
433
A
TIP
209
3
HOH
HOH
434
A
TIP
210
3
HOH
HOH
435
A
TIP
211
3
HOH
HOH
436
A
TIP
215
3
HOH
HOH
437
A
TIP
219
3
HOH
HOH
438
A
TIP
220
3
HOH
HOH
439
A
TIP
225
3
HOH
HOH
440
A
TIP
226
3
HOH
HOH
441
A
TIP
227
3
HOH
HOH
442
A
TIP
228
3
HOH
HOH
443
A
TIP
230
3
HOH
HOH
444
A
TIP
231
3
HOH
HOH
445
A
TIP
232
3
HOH
HOH
446
A
TIP
233
3
HOH
HOH
447
A
TIP
234
3
HOH
HOH
448
A
TIP
236
3
HOH
HOH
449
A
TIP
237
3
HOH
HOH
450
A
TIP
240
3
HOH
HOH
451
A
TIP
241
3
HOH
HOH
452
A
TIP
242
3
HOH
HOH
453
A
TIP
244
3
HOH
HOH
454
A
TIP
246
3
HOH
HOH
455
A
TIP
247
3
HOH
HOH
456
A
TIP
248
3
HOH
HOH
457
A
TIP
1
3
HOH
HOH
139
B
TIP
2
3
HOH
HOH
140
B
TIP
5
3
HOH
HOH
141
B
TIP
6
3
HOH
HOH
142
B
TIP
7
3
HOH
HOH
143
B
TIP
9
3
HOH
HOH
144
B
TIP
11
3
HOH
HOH
145
B
TIP
13
3
HOH
HOH
146
B
TIP
14
3
HOH
HOH
147
B
TIP
17
3
HOH
HOH
148
B
TIP
18
3
HOH
HOH
149
B
TIP
28
3
HOH
HOH
150
B
TIP
33
3
HOH
HOH
151
B
TIP
36
3
HOH
HOH
152
B
TIP
38
3
HOH
HOH
153
B
TIP
39
3
HOH
HOH
154
B
TIP
43
3
HOH
HOH
155
B
TIP
46
3
HOH
HOH
156
B
TIP
47
3
HOH
HOH
157
B
TIP
51
3
HOH
HOH
158
B
TIP
56
3
HOH
HOH
159
B
TIP
59
3
HOH
HOH
160
B
TIP
62
3
HOH
HOH
161
B
TIP
63
3
HOH
HOH
162
B
TIP
65
3
HOH
HOH
163
B
TIP
66
3
HOH
HOH
164
B
TIP
68
3
HOH
HOH
165
B
TIP
71
3
HOH
HOH
166
B
TIP
73
3
HOH
HOH
167
B
TIP
74
3
HOH
HOH
168
B
TIP
77
3
HOH
HOH
169
B
TIP
79
3
HOH
HOH
170
B
TIP
80
3
HOH
HOH
171
B
TIP
82
3
HOH
HOH
172
B
TIP
83
3
HOH
HOH
173
B
TIP
85
3
HOH
HOH
174
B
TIP
87
3
HOH
HOH
175
B
TIP
90
3
HOH
HOH
176
B
TIP
97
3
HOH
HOH
177
B
TIP
100
3
HOH
HOH
178
B
TIP
102
3
HOH
HOH
179
B
TIP
103
3
HOH
HOH
180
B
TIP
104
3
HOH
HOH
181
B
TIP
108
3
HOH
HOH
182
B
TIP
114
3
HOH
HOH
183
B
TIP
115
3
HOH
HOH
184
B
TIP
118
3
HOH
HOH
185
B
TIP
121
3
HOH
HOH
186
B
TIP
124
3
HOH
HOH
187
B
TIP
126
3
HOH
HOH
188
B
TIP
127
3
HOH
HOH
189
B
TIP
134
3
HOH
HOH
190
B
TIP
138
3
HOH
HOH
191
B
TIP
142
3
HOH
HOH
192
B
TIP
146
3
HOH
HOH
193
B
TIP
151
3
HOH
HOH
194
B
TIP
154
3
HOH
HOH
195
B
TIP
157
3
HOH
HOH
196
B
TIP
158
3
HOH
HOH
197
B
TIP
159
3
HOH
HOH
198
B
TIP
165
3
HOH
HOH
199
B
TIP
168
3
HOH
HOH
200
B
TIP
169
3
HOH
HOH
201
B
TIP
170
3
HOH
HOH
202
B
TIP
171
3
HOH
HOH
203
B
TIP
172
3
HOH
HOH
204
B
TIP
175
3
HOH
HOH
205
B
TIP
177
3
HOH
HOH
206
B
TIP
181
3
HOH
HOH
207
B
TIP
187
3
HOH
HOH
208
B
TIP
188
3
HOH
HOH
209
B
TIP
191
3
HOH
HOH
210
B
TIP
193
3
HOH
HOH
211
B
TIP
199
3
HOH
HOH
212
B
TIP
205
3
HOH
HOH
213
B
TIP
206
3
HOH
HOH
214
B
TIP
212
3
HOH
HOH
215
B
TIP
213
3
HOH
HOH
216
B
TIP
214
3
HOH
HOH
217
B
TIP
216
3
HOH
HOH
218
B
TIP
217
3
HOH
HOH
219
B
TIP
218
3
HOH
HOH
220
B
TIP
221
3
HOH
HOH
221
B
TIP
222
3
HOH
HOH
222
B
TIP
223
3
HOH
HOH
223
B
TIP
224
3
HOH
HOH
224
B
TIP
229
3
HOH
HOH
225
B
TIP
235
3
HOH
HOH
226
B
TIP
238
3
HOH
HOH
227
B
TIP
239
3
HOH
HOH
228
B
TIP
243
3
HOH
HOH
229
B
TIP
245
3
HOH
HOH
230
B
MSE
1
n
1
MSE
1
A
SER
2
n
2
SER
2
A
GLY
3
n
3
GLY
3
A
THR
4
n
4
THR
4
A
LEU
5
n
5
LEU
5
A
MSE
6
n
6
MSE
6
A
ALA
7
n
7
ALA
7
A
PHE
8
n
8
PHE
8
A
ASP
9
n
9
ASP
9
A
PHE
10
n
10
PHE
10
A
GLY
11
n
11
GLY
11
A
THR
12
n
12
THR
12
A
LYS
13
n
13
LYS
13
A
SER
14
n
14
SER
14
A
ILE
15
n
15
ILE
15
A
GLY
16
n
16
GLY
16
A
VAL
17
n
17
VAL
17
A
ALA
18
n
18
ALA
18
A
VAL
19
n
19
VAL
19
A
GLY
20
n
20
GLY
20
A
GLN
21
n
21
GLN
21
A
ARG
22
n
22
ARG
22
A
ILE
23
n
23
ILE
23
A
THR
24
n
24
THR
24
A
GLY
25
n
25
GLY
25
A
THR
26
n
26
THR
26
A
ALA
27
n
27
ALA
27
A
ARG
28
n
28
ARG
28
A
PRO
29
n
29
PRO
29
A
LEU
30
n
30
LEU
30
A
PRO
31
n
31
PRO
31
A
ALA
32
n
32
ALA
32
A
ILE
33
n
33
ILE
33
A
LYS
34
n
34
LYS
34
A
ALA
35
n
35
ALA
35
A
GLN
36
n
36
GLN
36
A
ASP
37
n
37
ASP
37
A
GLY
38
n
38
GLY
38
A
THR
39
n
39
THR
39
A
PRO
40
n
40
PRO
40
A
ASP
41
n
41
ASP
41
A
TRP
42
n
42
TRP
42
A
ASN
43
n
43
ASN
43
A
ILE
44
n
44
ILE
44
A
ILE
45
n
45
ILE
45
A
GLU
46
n
46
GLU
46
A
ARG
47
n
47
ARG
47
A
LEU
48
n
48
LEU
48
A
LEU
49
n
49
LEU
49
A
LYS
50
n
50
LYS
50
A
GLU
51
n
51
GLU
51
A
TRP
52
n
52
TRP
52
A
GLN
53
n
53
GLN
53
A
PRO
54
n
54
PRO
54
A
ASP
55
n
55
ASP
55
A
GLU
56
n
56
GLU
56
A
ILE
57
n
57
ILE
57
A
ILE
58
n
58
ILE
58
A
VAL
59
n
59
VAL
59
A
GLY
60
n
60
GLY
60
A
LEU
61
n
61
LEU
61
A
PRO
62
n
62
PRO
62
A
LEU
63
n
63
LEU
63
A
ASN
64
n
64
ASN
64
A
MSE
65
n
65
MSE
65
A
ASP
66
n
66
ASP
66
A
GLY
67
n
67
GLY
67
A
THR
68
n
68
THR
68
A
GLU
69
n
69
GLU
69
A
GLN
70
n
70
GLN
70
A
PRO
71
n
71
PRO
71
A
LEU
72
n
72
LEU
72
A
THR
73
n
73
THR
73
A
ALA
74
n
74
ALA
74
A
ARG
75
n
75
ARG
75
A
ALA
76
n
76
ALA
76
A
ARG
77
n
77
ARG
77
A
LYS
78
n
78
LYS
78
A
PHE
79
n
79
PHE
79
A
ALA
80
n
80
ALA
80
A
ASN
81
n
81
ASN
81
A
ARG
82
n
82
ARG
82
A
ILE
83
n
83
ILE
83
A
HIS
84
n
84
HIS
84
A
GLY
85
n
85
GLY
85
A
ARG
86
n
86
ARG
86
A
PHE
87
n
87
PHE
87
A
GLY
88
n
88
GLY
88
A
VAL
89
n
89
VAL
89
A
GLU
90
n
90
GLU
90
A
VAL
91
n
91
VAL
91
A
LYS
92
n
92
LYS
92
A
LEU
93
n
93
LEU
93
A
HIS
94
n
94
HIS
94
A
ASP
95
n
95
ASP
95
A
GLU
96
n
96
GLU
96
A
ARG
97
n
97
ARG
97
A
LEU
98
n
98
LEU
98
A
SER
99
n
99
SER
99
A
THR
100
n
100
THR
100
A
VAL
101
n
101
VAL
101
A
GLU
102
n
102
GLU
102
A
ALA
103
n
103
ALA
103
A
n
104
A
103
A
n
105
B
103
A
n
106
C
103
A
n
107
D
103
A
n
108
E
103
A
n
109
F
103
A
n
110
G
103
A
GLY
110
n
111
GLY
110
A
GLY
111
n
112
GLY
111
A
TYR
112
n
113
TYR
112
A
ARG
114
n
114
ARG
114
A
ALA
115
n
115
ALA
115
A
LEU
116
n
116
LEU
116
A
ASN
117
n
117
ASN
117
A
LYS
118
n
118
LYS
118
A
GLY
119
n
119
GLY
119
A
LYS
120
n
120
LYS
120
A
VAL
121
n
121
VAL
121
A
ASP
122
n
122
ASP
122
A
SER
123
n
123
SER
123
A
ALA
124
n
124
ALA
124
A
SER
125
n
125
SER
125
A
ALA
126
n
126
ALA
126
A
VAL
127
n
127
VAL
127
A
ILE
128
n
128
ILE
128
A
ILE
129
n
129
ILE
129
A
LEU
130
n
130
LEU
130
A
GLU
131
n
131
GLU
131
A
SER
132
n
132
SER
132
A
TYR
133
n
133
TYR
133
A
MSE
134
n
134
MSE
134
A
GLU
135
n
135
GLU
135
A
GLN
136
n
136
GLN
136
A
GLY
137
n
137
GLY
137
A
TYR
138
n
138
TYR
138
A
n
1
1
B
SER
2
n
2
SER
2
B
GLY
3
n
3
GLY
3
B
THR
4
n
4
THR
4
B
LEU
5
n
5
LEU
5
B
MSE
6
n
6
MSE
6
B
ALA
7
n
7
ALA
7
B
PHE
8
n
8
PHE
8
B
ASP
9
n
9
ASP
9
B
PHE
10
n
10
PHE
10
B
GLY
11
n
11
GLY
11
B
THR
12
n
12
THR
12
B
LYS
13
n
13
LYS
13
B
SER
14
n
14
SER
14
B
ILE
15
n
15
ILE
15
B
GLY
16
n
16
GLY
16
B
VAL
17
n
17
VAL
17
B
ALA
18
n
18
ALA
18
B
VAL
19
n
19
VAL
19
B
GLY
20
n
20
GLY
20
B
GLN
21
n
21
GLN
21
B
ARG
22
n
22
ARG
22
B
ILE
23
n
23
ILE
23
B
THR
24
n
24
THR
24
B
GLY
25
n
25
GLY
25
B
THR
26
n
26
THR
26
B
ALA
27
n
27
ALA
27
B
ARG
28
n
28
ARG
28
B
PRO
29
n
29
PRO
29
B
LEU
30
n
30
LEU
30
B
PRO
31
n
31
PRO
31
B
ALA
32
n
32
ALA
32
B
ILE
33
n
33
ILE
33
B
LYS
34
n
34
LYS
34
B
ALA
35
n
35
ALA
35
B
GLN
36
n
36
GLN
36
B
ASP
37
n
37
ASP
37
B
GLY
38
n
38
GLY
38
B
THR
39
n
39
THR
39
B
PRO
40
n
40
PRO
40
B
ASP
41
n
41
ASP
41
B
TRP
42
n
42
TRP
42
B
ASN
43
n
43
ASN
43
B
ILE
44
n
44
ILE
44
B
ILE
45
n
45
ILE
45
B
GLU
46
n
46
GLU
46
B
ARG
47
n
47
ARG
47
B
LEU
48
n
48
LEU
48
B
LEU
49
n
49
LEU
49
B
LYS
50
n
50
LYS
50
B
GLU
51
n
51
GLU
51
B
TRP
52
n
52
TRP
52
B
GLN
53
n
53
GLN
53
B
PRO
54
n
54
PRO
54
B
ASP
55
n
55
ASP
55
B
GLU
56
n
56
GLU
56
B
ILE
57
n
57
ILE
57
B
ILE
58
n
58
ILE
58
B
VAL
59
n
59
VAL
59
B
GLY
60
n
60
GLY
60
B
LEU
61
n
61
LEU
61
B
PRO
62
n
62
PRO
62
B
LEU
63
n
63
LEU
63
B
ASN
64
n
64
ASN
64
B
MSE
65
n
65
MSE
65
B
ASP
66
n
66
ASP
66
B
GLY
67
n
67
GLY
67
B
THR
68
n
68
THR
68
B
GLU
69
n
69
GLU
69
B
GLN
70
n
70
GLN
70
B
PRO
71
n
71
PRO
71
B
LEU
72
n
72
LEU
72
B
THR
73
n
73
THR
73
B
ALA
74
n
74
ALA
74
B
ARG
75
n
75
ARG
75
B
ALA
76
n
76
ALA
76
B
ARG
77
n
77
ARG
77
B
LYS
78
n
78
LYS
78
B
PHE
79
n
79
PHE
79
B
ALA
80
n
80
ALA
80
B
ASN
81
n
81
ASN
81
B
ARG
82
n
82
ARG
82
B
ILE
83
n
83
ILE
83
B
HIS
84
n
84
HIS
84
B
GLY
85
n
85
GLY
85
B
ARG
86
n
86
ARG
86
B
PHE
87
n
87
PHE
87
B
GLY
88
n
88
GLY
88
B
VAL
89
n
89
VAL
89
B
GLU
90
n
90
GLU
90
B
VAL
91
n
91
VAL
91
B
LYS
92
n
92
LYS
92
B
LEU
93
n
93
LEU
93
B
HIS
94
n
94
HIS
94
B
ASP
95
n
95
ASP
95
B
GLU
96
n
96
GLU
96
B
ARG
97
n
97
ARG
97
B
LEU
98
n
98
LEU
98
B
SER
99
n
99
SER
99
B
THR
100
n
100
THR
100
B
VAL
101
n
101
VAL
101
B
GLU
102
n
102
GLU
102
B
ALA
103
n
103
ALA
103
B
n
104
104
B
n
105
105
B
n
106
106
B
n
107
107
B
n
108
108
B
n
109
109
B
n
110
110
B
n
111
111
B
n
112
112
B
n
113
113
B
n
114
114
B
n
115
115
B
n
116
116
B
n
117
117
B
n
118
118
B
n
119
119
B
n
120
120
B
VAL
121
n
121
VAL
121
B
ASP
122
n
122
ASP
122
B
SER
123
n
123
SER
123
B
ALA
124
n
124
ALA
124
B
SER
125
n
125
SER
125
B
ALA
126
n
126
ALA
126
B
VAL
127
n
127
VAL
127
B
ILE
128
n
128
ILE
128
B
ILE
129
n
129
ILE
129
B
LEU
130
n
130
LEU
130
B
GLU
131
n
131
GLU
131
B
SER
132
n
132
SER
132
B
TYR
133
n
133
TYR
133
B
MSE
134
n
134
MSE
134
B
GLU
135
n
135
GLU
135
B
GLN
136
n
136
GLN
136
B
GLY
137
n
137
GLY
137
B
TYR
138
n
138
TYR
138
B
author_defined_assembly
1
monomeric
author_defined_assembly
1
monomeric
A
MSE
1
SELENOMETHIONINE
A
MSE
1
MET
A
MSE
6
SELENOMETHIONINE
A
MSE
6
MET
A
MSE
65
SELENOMETHIONINE
A
MSE
65
MET
A
MSE
134
SELENOMETHIONINE
A
MSE
134
MET
B
MSE
6
SELENOMETHIONINE
B
MSE
6
MET
B
MSE
65
SELENOMETHIONINE
B
MSE
65
MET
B
MSE
134
SELENOMETHIONINE
B
MSE
134
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
THR
39
A
O
THR
39
A
N
GLN
36
A
N
GLN
36
A
O
ILE
33
A
O
ILE
33
A
N
ILE
15
A
N
ILE
15
A
O
GLY
20
A
O
GLY
20
A
N
LEU
5
A
N
LEU
5
A
N
MSE
6
A
N
MSE
6
A
O
ILE
58
A
O
ILE
58
A
N
ILE
57
A
N
ILE
57
A
O
LYS
92
A
O
LYS
92
B
O
THR
39
B
O
THR
39
B
N
GLN
36
B
N
GLN
36
B
O
ARG
28
B
O
ARG
28
B
N
VAL
19
B
N
VAL
19
B
O
GLY
20
B
O
GLY
20
B
N
LEU
5
B
N
LEU
5
B
N
MSE
6
B
N
MSE
6
B
O
ILE
58
B
O
ILE
58
B
N
ILE
57
B
N
ILE
57
B
O
LYS
92
B
O
LYS
92
A
1
A
ARG
103
A
ARG
104
1
Y
B
1
A
SER
103
A
SER
105
1
Y
C
1
A
GLY
103
A
GLY
106
1
Y
D
1
A
LEU
103
A
LEU
107
1
Y
E
1
A
PHE
103
A
PHE
108
1
Y
F
1
A
GLU
103
A
GLU
109
1
Y
G
1
A
GLN
103
A
GLN
110
1
Y
1
B
MSE
1
B
MSE
1
1
Y
1
B
ARG
104
B
ARG
104
1
Y
1
B
SER
105
B
SER
105
1
Y
1
B
GLY
106
B
GLY
106
1
Y
1
B
LEU
107
B
LEU
107
1
Y
1
B
PHE
108
B
PHE
108
1
Y
1
B
GLU
109
B
GLU
109
1
Y
1
B
GLN
110
B
GLN
110
1
Y
1
B
GLY
111
B
GLY
111
1
Y
1
B
GLY
112
B
GLY
112
1
Y
1
B
TYR
113
B
TYR
113
1
Y
1
B
ARG
114
B
ARG
114
1
Y
1
B
ALA
115
B
ALA
115
1
Y
1
B
LEU
116
B
LEU
116
1
Y
1
B
ASN
117
B
ASN
117
1
Y
1
B
LYS
118
B
LYS
118
1
Y
1
B
GLY
119
B
GLY
119
1
Y
1
B
LYS
120
B
LYS
120
1
Y
1
3.01
0.50
120.30
123.31
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
77
77
77
N
1
B
B
CD
OE2
GLU
GLU
51
51
0.079
0.011
1.252
1.331
N
1
B
GLN
53
39.60
55.89
1
B
LEU
72
89.60
-5.22
1
B
ARG
86
-136.70
-46.00
25.9
0.228
0.189
1.6
20.0
2172
31551
31110
98.6
random
1
THROUGHOUT
0
FOURIER SYNTHESIS
Engh & Huber
1.6
20.0
248
2193
5
0
1940
0.019
1.9
0.261
0.203
1.66
191
2978
1.6
20.0
1NU0
59847
31128
0
0
0.046
1
28.1
99.6
0.161
1.6
1.66
97.0
data reduction
DENZO
data scaling
SCALEPACK
refinement
CNS
phasing
CNS
Structure of the double mutant (L6M; F134M, SeMet form) of yqgF from Escherichia coli, a hypothetical protein
1
N
N
1
N
N
2
N
N
3
N
N
3
N
N
A
ASP
41
A
ASP
41
HELX_P
A
GLN
53
A
GLN
53
1
1
13
A
GLN
70
A
GLN
70
HELX_P
A
GLY
88
A
GLY
88
1
2
19
A
ASN
117
A
ASN
117
HELX_P
A
ASP
122
A
ASP
122
1
3
6
A
SER
123
A
SER
123
HELX_P
A
GLN
136
A
GLN
136
1
4
14
B
ASP
41
B
ASP
41
HELX_P
B
GLN
53
B
GLN
53
1
5
13
B
LEU
72
B
LEU
72
HELX_P
B
GLY
88
B
GLY
88
1
6
17
B
SER
123
B
SER
123
HELX_P
B
GLY
137
B
GLY
137
1
7
15
covale
1.334
both
A
MSE
1
A
C
MSE
1
1_555
A
SER
2
A
N
SER
2
1_555
covale
1.329
both
A
LEU
5
A
C
LEU
5
1_555
A
MSE
6
A
N
MSE
6
1_555
covale
1.321
both
A
MSE
6
A
C
MSE
6
1_555
A
ALA
7
A
N
ALA
7
1_555
covale
1.328
both
A
ASN
64
A
C
ASN
64
1_555
A
MSE
65
A
N
MSE
65
1_555
covale
1.338
both
A
MSE
65
A
C
MSE
65
1_555
A
ASP
66
A
N
ASP
66
1_555
covale
1.327
both
A
TYR
133
A
C
TYR
133
1_555
A
MSE
134
A
N
MSE
134
1_555
covale
1.321
both
A
MSE
134
A
C
MSE
134
1_555
A
GLU
135
A
N
GLU
135
1_555
covale
1.328
both
B
LEU
5
B
C
LEU
5
1_555
B
MSE
6
B
N
MSE
6
1_555
covale
1.337
both
B
MSE
6
B
C
MSE
6
1_555
B
ALA
7
B
N
ALA
7
1_555
covale
1.332
both
B
ASN
64
B
C
ASN
64
1_555
B
MSE
65
B
N
MSE
65
1_555
covale
1.330
both
B
MSE
65
B
C
MSE
65
1_555
B
ASP
66
B
N
ASP
66
1_555
covale
1.320
both
B
TYR
133
B
C
TYR
133
1_555
B
MSE
134
B
N
MSE
134
1_555
covale
1.328
both
B
MSE
134
B
C
MSE
134
1_555
B
GLU
135
B
N
GLU
135
1_555
STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Structural genomics, hypothetical protein, yqgF, Structure 2 Function Project, S2F, UNKNOWN FUNCTION
RUVX_ECOLI
UNP
1
1
P0A8I1
MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFA
NRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIILESYFEQGY
1
138
1NU0
1
138
P0A8I1
A
1
1
138
1
138
1NU0
1
138
P0A8I1
B
1
1
138
1
MET
modified residue
MSE
1
1NU0
A
P0A8I1
UNP
1
1
1
LEU
engineered mutation
MSE
6
1NU0
A
P0A8I1
UNP
6
6
1
MET
modified residue
MSE
65
1NU0
A
P0A8I1
UNP
65
65
1
PHE
engineered mutation
MSE
134
1NU0
A
P0A8I1
UNP
134
134
2
MET
modified residue
MSE
1
1NU0
B
P0A8I1
UNP
1
1
2
LEU
engineered mutation
MSE
6
1NU0
B
P0A8I1
UNP
6
6
2
MET
modified residue
MSE
65
1NU0
B
P0A8I1
UNP
65
65
2
PHE
engineered mutation
MSE
134
1NU0
B
P0A8I1
UNP
134
134
6
6
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
A
THR
39
A
THR
39
A
PRO
40
A
PRO
40
A
THR
26
A
THR
26
A
GLN
36
A
GLN
36
A
SER
14
A
SER
14
A
GLN
21
A
GLN
21
A
THR
4
A
THR
4
A
ASP
9
A
ASP
9
A
GLU
56
A
GLU
56
A
LEU
63
A
LEU
63
A
VAL
91
A
VAL
91
A
ARG
97
A
ARG
97
B
THR
39
B
THR
39
B
PRO
40
B
PRO
40
B
ALA
27
B
ALA
27
B
GLN
36
B
GLN
36
B
SER
14
B
SER
14
B
GLN
21
B
GLN
21
B
THR
4
B
THR
4
B
ASP
9
B
ASP
9
B
GLU
56
B
GLU
56
B
LEU
61
B
LEU
61
B
VAL
91
B
VAL
91
B
ASP
95
B
ASP
95
BINDING SITE FOR RESIDUE SO4 A 301
A
SO4
301
Software
3
A
LYS
78
A
LYS
78
3
1_555
A
ARG
82
A
ARG
82
3
1_555
B
ARG
97
B
ARG
97
3
1_555
19
P 21 21 21