0.012763
0.000000
0.000000
0.000000
0.010797
0.000000
0.000000
0.000000
0.027106
0.00000
0.00000
0.00000
Bent, C.J.
Isaacs, N.W.
Mitchell, T.J.
Riboldi-Tunnicliffe, A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
78.353
92.622
36.892
C2 H4 O2
60.052
ACETIC ACID
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
C
N
2
N
O
N
3
N
O
N
4
N
C
N
5
N
H
N
6
N
H
N
7
N
H
N
8
N
H
N
9
N
N
N
10
S
C
N
11
N
C
N
12
N
O
N
13
N
C
N
14
N
O
N
15
N
H
N
16
N
H
N
17
N
H
N
18
N
H
N
19
N
H
N
20
N
H
N
21
N
H
N
22
N
N
N
23
S
C
N
24
N
C
N
25
N
O
N
26
N
C
N
27
N
C
N
28
N
C
N
29
N
N
N
30
N
C
N
31
N
N
N
32
N
N
N
33
N
O
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
N
N
50
S
C
N
51
N
C
N
52
N
O
N
53
N
C
N
54
N
C
N
55
N
O
N
56
N
N
N
57
N
O
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
N
N
67
S
C
N
68
N
C
N
69
N
O
N
70
N
C
N
71
N
C
N
72
N
O
N
73
N
O
N
74
N
O
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
N
N
83
S
C
N
84
N
C
N
85
N
O
N
86
N
C
N
87
N
C
N
88
N
C
N
89
N
O
N
90
N
N
N
91
N
O
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
N
N
103
S
C
N
104
N
C
N
105
N
O
N
106
N
C
N
107
N
C
N
108
N
C
N
109
N
O
N
110
N
O
N
111
N
O
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
N
N
122
N
C
N
123
N
C
N
124
N
O
N
125
N
O
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
N
N
135
S
C
N
136
N
C
N
137
N
O
N
138
S
C
N
139
N
C
N
140
N
C
N
141
N
C
N
142
N
O
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
N
N
157
S
C
N
158
N
C
N
159
N
O
N
160
N
C
N
161
N
C
N
162
N
C
N
163
N
C
N
164
N
O
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
N
N
179
S
C
N
180
N
C
N
181
N
O
N
182
N
C
N
183
N
C
N
184
N
C
N
185
N
C
N
186
N
N
N
187
N
O
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
N
N
204
S
C
N
205
N
C
N
206
N
O
N
207
N
C
N
208
N
C
N
209
N
S
N
210
N
C
N
211
N
O
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
N
N
224
S
C
N
225
N
C
N
226
N
O
N
227
N
C
Y
228
N
C
Y
229
N
C
Y
230
N
C
Y
231
N
C
Y
232
N
C
Y
233
N
C
N
234
N
O
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
N
N
247
S
C
N
248
N
C
N
249
N
O
N
250
N
C
N
251
N
C
N
252
N
C
N
253
N
O
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
N
N
264
S
C
N
265
N
C
N
266
N
O
N
267
N
C
N
268
N
O
N
269
N
O
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
N
N
278
S
C
N
279
N
C
N
280
N
O
N
281
R
C
N
282
N
O
N
283
N
C
N
284
N
O
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
N
N
295
S
C
N
296
N
C
N
297
N
O
N
298
N
C
Y
299
N
C
Y
300
N
C
Y
301
N
C
Y
302
N
C
Y
303
N
C
Y
304
N
C
N
305
N
O
N
306
N
O
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
N
C
N
323
N
C
N
324
N
C
N
325
N
O
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
doub
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
doub
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
doub
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
doub
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
doub
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
doub
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
doub
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
doub
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
doub
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
doub
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
doub
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
doub
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
doub
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
doub
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
doub
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
doub
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
Y
221
N
doub
Y
222
N
sing
Y
223
N
sing
N
224
N
sing
Y
225
N
doub
N
226
N
sing
Y
227
N
doub
N
228
N
sing
Y
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
doub
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
doub
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
doub
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
doub
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
Y
290
N
doub
Y
291
N
sing
Y
292
N
sing
N
293
N
sing
Y
294
N
doub
N
295
N
sing
Y
296
N
doub
N
297
N
sing
Y
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
doub
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
US
J.Bacteriol.
JOBAAY
0767
0021-9193
186
2872
2879
10.1128/JB.186.9.2872-2879.2004
15090529
Crystal structure of the response regulator 02 receiver domain, the essential YycF two-component system of Streptococcus pneumoniae in both complexed and native states.
2004
10.2210/pdb1nxw/pdb
pdb_00001nxw
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2002-12-05
MACSCIENCE
SINGLE WAVELENGTH
M
x-ray
1
1.024
1.0
BM14
ESRF
1.024
SYNCHROTRON
ESRF BEAMLINE BM14
13600.730
DNA-binding response regulator
MicA Receiver Domain
1
man
polymer
60.052
ACETIC ACID
1
syn
non-polymer
18.015
water
56
nat
water
no
no
MKKILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSA
KDSEFDKVIGLELGADDYVTKPFSNRELQARVKALLRRSQ
MKKILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSA
KDSEFDKVIGLELGADDYVTKPFSNRELQARVKALLRRSQ
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Streptococcus
Streptococcus pneumoniae
TIGR4
Escherichia
Escherichia coli
sample
170187
Streptococcus pneumoniae
469008
Escherichia coli BL21(DE3)
BL21 (DE3)
Plasmid
pET33b
1
2.40
48.40
VAPOR DIFFUSION, SITTING DROP
5.1
PEG 300, Sodium acetate, pH 5.1, VAPOR DIFFUSION, SITTING DROP, temperature 293K
293
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_site
repository
Initial release
Version format compliance
Advisory
Source and taxonomy
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
1
0
2004-02-17
1
1
2008-04-29
1
2
2011-07-13
1
3
2023-08-16
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2003-02-11
REL
REL
ACY
ACETIC ACID
HOH
water
1NXT
PDB ENTRY 1NXT
PDB
experimental model
ACY
101
2
ACY
ACY
121
A
HOH
1
3
HOH
HOH
122
A
HOH
2
3
HOH
HOH
123
A
HOH
3
3
HOH
HOH
124
A
HOH
4
3
HOH
HOH
125
A
HOH
5
3
HOH
HOH
126
A
HOH
6
3
HOH
HOH
127
A
HOH
7
3
HOH
HOH
128
A
HOH
8
3
HOH
HOH
129
A
HOH
9
3
HOH
HOH
130
A
HOH
10
3
HOH
HOH
131
A
HOH
11
3
HOH
HOH
132
A
HOH
12
3
HOH
HOH
133
A
HOH
13
3
HOH
HOH
134
A
HOH
14
3
HOH
HOH
135
A
HOH
15
3
HOH
HOH
136
A
HOH
16
3
HOH
HOH
137
A
HOH
17
3
HOH
HOH
138
A
HOH
18
3
HOH
HOH
139
A
HOH
19
3
HOH
HOH
140
A
HOH
20
3
HOH
HOH
141
A
HOH
21
3
HOH
HOH
142
A
HOH
22
3
HOH
HOH
143
A
HOH
23
3
HOH
HOH
144
A
HOH
24
3
HOH
HOH
145
A
HOH
25
3
HOH
HOH
146
A
HOH
26
3
HOH
HOH
147
A
HOH
27
3
HOH
HOH
148
A
HOH
28
3
HOH
HOH
149
A
HOH
29
3
HOH
HOH
150
A
HOH
30
3
HOH
HOH
151
A
HOH
31
3
HOH
HOH
152
A
HOH
32
3
HOH
HOH
153
A
HOH
33
3
HOH
HOH
154
A
HOH
34
3
HOH
HOH
155
A
HOH
35
3
HOH
HOH
156
A
HOH
36
3
HOH
HOH
157
A
HOH
37
3
HOH
HOH
158
A
HOH
38
3
HOH
HOH
159
A
HOH
39
3
HOH
HOH
160
A
HOH
40
3
HOH
HOH
161
A
HOH
41
3
HOH
HOH
162
A
HOH
42
3
HOH
HOH
163
A
HOH
43
3
HOH
HOH
164
A
HOH
44
3
HOH
HOH
165
A
HOH
45
3
HOH
HOH
166
A
HOH
46
3
HOH
HOH
167
A
HOH
47
3
HOH
HOH
168
A
HOH
48
3
HOH
HOH
169
A
HOH
49
3
HOH
HOH
170
A
HOH
50
3
HOH
HOH
171
A
HOH
51
3
HOH
HOH
172
A
HOH
52
3
HOH
HOH
173
A
HOH
53
3
HOH
HOH
174
A
HOH
54
3
HOH
HOH
175
A
HOH
55
3
HOH
HOH
176
A
HOH
56
3
HOH
HOH
177
A
n
1
1
A
LYS
2
n
2
LYS
2
A
LYS
3
n
3
LYS
3
A
ILE
4
n
4
ILE
4
A
LEU
5
n
5
LEU
5
A
ILE
6
n
6
ILE
6
A
VAL
7
n
7
VAL
7
A
ASP
8
n
8
ASP
8
A
ASP
9
n
9
ASP
9
A
GLU
10
n
10
GLU
10
A
LYS
11
n
11
LYS
11
A
PRO
12
n
12
PRO
12
A
ILE
13
n
13
ILE
13
A
SER
14
n
14
SER
14
A
ASP
15
n
15
ASP
15
A
ILE
16
n
16
ILE
16
A
ILE
17
n
17
ILE
17
A
LYS
18
n
18
LYS
18
A
PHE
19
n
19
PHE
19
A
ASN
20
n
20
ASN
20
A
MET
21
n
21
MET
21
A
THR
22
n
22
THR
22
A
LYS
23
n
23
LYS
23
A
GLU
24
n
24
GLU
24
A
GLY
25
n
25
GLY
25
A
TYR
26
n
26
TYR
26
A
GLU
27
n
27
GLU
27
A
VAL
28
n
28
VAL
28
A
VAL
29
n
29
VAL
29
A
THR
30
n
30
THR
30
A
ALA
31
n
31
ALA
31
A
PHE
32
n
32
PHE
32
A
ASN
33
n
33
ASN
33
A
GLY
34
n
34
GLY
34
A
ARG
35
n
35
ARG
35
A
GLU
36
n
36
GLU
36
A
ALA
37
n
37
ALA
37
A
LEU
38
n
38
LEU
38
A
GLU
39
n
39
GLU
39
A
GLN
40
n
40
GLN
40
A
PHE
41
n
41
PHE
41
A
GLU
42
n
42
GLU
42
A
ALA
43
n
43
ALA
43
A
GLU
44
n
44
GLU
44
A
GLN
45
n
45
GLN
45
A
PRO
46
n
46
PRO
46
A
ASP
47
n
47
ASP
47
A
ILE
48
n
48
ILE
48
A
ILE
49
n
49
ILE
49
A
ILE
50
n
50
ILE
50
A
LEU
51
n
51
LEU
51
A
ASP
52
n
52
ASP
52
A
LEU
53
n
53
LEU
53
A
MET
54
n
54
MET
54
A
LEU
55
n
55
LEU
55
A
PRO
56
n
56
PRO
56
A
GLU
57
n
57
GLU
57
A
ILE
58
n
58
ILE
58
A
ASP
59
n
59
ASP
59
A
GLY
60
n
60
GLY
60
A
LEU
61
n
61
LEU
61
A
GLU
62
n
62
GLU
62
A
VAL
63
n
63
VAL
63
A
ALA
64
n
64
ALA
64
A
LYS
65
n
65
LYS
65
A
THR
66
n
66
THR
66
A
ILE
67
n
67
ILE
67
A
ARG
68
n
68
ARG
68
A
LYS
69
n
69
LYS
69
A
THR
70
n
70
THR
70
A
SER
71
n
71
SER
71
A
SER
72
n
72
SER
72
A
VAL
73
n
73
VAL
73
A
PRO
74
n
74
PRO
74
A
ILE
75
n
75
ILE
75
A
LEU
76
n
76
LEU
76
A
MET
77
n
77
MET
77
A
LEU
78
n
78
LEU
78
A
SER
79
n
79
SER
79
A
ALA
80
n
80
ALA
80
A
LYS
81
n
81
LYS
81
A
ASP
82
n
82
ASP
82
A
SER
83
n
83
SER
83
A
GLU
84
n
84
GLU
84
A
PHE
85
n
85
PHE
85
A
ASP
86
n
86
ASP
86
A
LYS
87
n
87
LYS
87
A
VAL
88
n
88
VAL
88
A
ILE
89
n
89
ILE
89
A
GLY
90
n
90
GLY
90
A
LEU
91
n
91
LEU
91
A
GLU
92
n
92
GLU
92
A
LEU
93
n
93
LEU
93
A
GLY
94
n
94
GLY
94
A
ALA
95
n
95
ALA
95
A
ASP
96
n
96
ASP
96
A
ASP
97
n
97
ASP
97
A
TYR
98
n
98
TYR
98
A
VAL
99
n
99
VAL
99
A
THR
100
n
100
THR
100
A
LYS
101
n
101
LYS
101
A
PRO
102
n
102
PRO
102
A
PHE
103
n
103
PHE
103
A
SER
104
n
104
SER
104
A
ASN
105
n
105
ASN
105
A
ARG
106
n
106
ARG
106
A
GLU
107
n
107
GLU
107
A
LEU
108
n
108
LEU
108
A
GLN
109
n
109
GLN
109
A
ALA
110
n
110
ALA
110
A
ARG
111
n
111
ARG
111
A
VAL
112
n
112
VAL
112
A
LYS
113
n
113
LYS
113
A
ALA
114
n
114
ALA
114
A
LEU
115
n
115
LEU
115
A
LEU
116
n
116
LEU
116
A
ARG
117
n
117
ARG
117
A
ARG
118
n
118
ARG
118
A
SER
119
n
119
SER
119
A
n
120
120
A
0.7285
-0.7438
-0.3426
2.3785
0.4417
0.7544
-0.0530
-0.0287
0.0214
0.1002
0.0472
-0.0081
0.0390
-0.0457
0.0058
0.0343
0.0359
-0.0212
0.0440
-0.0029
0.0699
refined
63.5490
10.8730
5.4440
X-RAY DIFFRACTION
A
2
A
2
A
24
A
24
X-RAY DIFFRACTION
1
A
25
A
25
A
44
A
44
X-RAY DIFFRACTION
1
A
45
A
45
A
54
A
54
X-RAY DIFFRACTION
1
A
58
A
58
A
70
A
70
X-RAY DIFFRACTION
1
A
71
A
71
A
94
A
94
X-RAY DIFFRACTION
1
A
95
A
95
A
119
A
119
X-RAY DIFFRACTION
1
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_555
x,-y,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
A
O
VAL
29
A
O
VAL
29
A
N
ILE
6
A
N
ILE
6
A
N
VAL
7
A
N
VAL
7
A
O
ILE
50
A
O
ILE
50
A
N
ILE
49
A
N
ILE
49
A
O
LEU
76
A
O
LEU
76
A
N
MET
77
A
N
MET
77
A
O
VAL
99
A
O
VAL
99
1
A
HOH
154
C
HOH
1
A
CD
GLU
10
A
CD
GLU
10
0
Y
1
A
OE1
GLU
10
A
OE1
GLU
10
0
Y
1
A
OE2
GLU
10
A
OE2
GLU
10
0
Y
1
A
CD
GLU
42
A
CD
GLU
42
0
Y
1
A
OE1
GLU
42
A
OE1
GLU
42
0
Y
1
A
OE2
GLU
42
A
OE2
GLU
42
0
Y
1
A
CB
SER
119
A
CB
SER
119
0
Y
1
A
MET
1
A
MET
1
1
Y
1
A
GLN
120
A
GLN
120
1
Y
1
A
A
OD1
O
ASP
HOH
8
170
1.99
1
22.06
2.70
114.20
136.26
A
A
A
CB
CG
CD
GLU
GLU
GLU
10
10
10
N
1
6.12
0.90
118.30
124.42
A
A
A
CB
CG
OD2
ASP
ASP
ASP
15
15
15
N
1
-3.63
0.50
120.30
116.67
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
118
118
118
N
1
-15.27
1.50
110.50
95.23
A
A
A
N
CA
CB
SER
SER
SER
119
119
119
N
1
A
A
CG
CD
GLU
GLU
10
10
-0.151
0.015
1.515
1.364
N
1
A
A
CG
CD
GLU
GLU
42
42
0.163
0.015
1.515
1.678
N
1
A
A
CA
CB
SER
SER
119
119
0.098
0.015
1.525
1.623
N
1
A
A
O
NH2
SER
ARG
72
118
2.13
1_555
4_555
1
A
A
O
O
HOH
HOH
152
171
2.16
1_555
6_655
1
A
GLU
57
57.71
-72.64
28.022
3.61
0.00
0.00
-2.21
0.00
-1.39
0.960
0.940
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.22382
0.1846
0.18839
1.92
28.87
1018
9519
9.7
99.04
3.686
0.105
RANDOM
LIKELY RESIDUAL
1
THROUGHOUT
2.0
MOLECULAR REPLACEMENT
0.155
0.144
0.80
0.80
1.40
PDB ENTRY 1NXT
BABINET MODEL WITH MASK
1.92
28.87
56
995
4
0
935
0.020
0.022
941
0.002
0.020
913
1.660
2.002
1265
0.902
3.000
2129
6.141
5.000
117
0.107
0.200
150
0.006
0.020
1013
0.002
0.020
169
0.248
0.200
203
0.250
0.200
1054
0.093
0.200
606
0.242
0.200
36
0.261
0.200
15
0.333
0.200
55
0.498
0.200
10
1.004
1.500
591
1.879
2.000
957
2.797
3.000
350
4.875
4.500
308
0.193
0.225
1.969
60
656
20
28.02
1.92
28.87
1NXW
10522
2.0
2.0
1
99.04
1.919
1.969
1
98.60
refinement
REFMAC
5.1.27
data reduction
MOSFLM
data scaling
CCP4
(SCALA)
phasing
MOLREP
MicArec pH 5.1
1
N
N
2
N
N
3
N
N
The second part of the biological assembly is generated by the two fold axis: x, -y, -z
A
GLU
10
A
GLU
10
HELX_P
A
GLU
24
A
GLU
24
1
1
15
A
ASN
33
A
ASN
33
HELX_P
A
GLN
45
A
GLN
45
1
2
13
A
ASP
59
A
ASP
59
HELX_P
A
SER
71
A
SER
71
1
3
13
A
SER
83
A
SER
83
HELX_P
A
LEU
93
A
LEU
93
1
4
11
A
SER
104
A
SER
104
HELX_P
A
ARG
118
A
ARG
118
1
5
15
SIGNALING PROTEIN
doubly wound 5 alpha - 5 beta structure, SIGNALING PROTEIN
A
LYS
101
A
LYS
101
1
A
PRO
102
A
PRO
102
3.52
Q9S1K0_STRPN
UNP
1
1
Q9S1K0
MKKILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSA
KDSEFDKVIGLELGADDYVTKPFSNRELQARVKALLRRSQ
1
120
1NXW
1
120
Q9S1K0
A
1
1
120
5
parallel
parallel
parallel
parallel
A
GLU
27
A
GLU
27
A
ALA
31
A
ALA
31
A
LYS
3
A
LYS
3
A
VAL
7
A
VAL
7
A
ILE
48
A
ILE
48
A
ASP
52
A
ASP
52
A
ILE
75
A
ILE
75
A
SER
79
A
SER
79
A
ASP
97
A
ASP
97
A
THR
100
A
THR
100
BINDING SITE FOR RESIDUE ACY A 121
A
ACY
121
Software
8
A
ASP
52
A
ASP
52
8
1_555
A
LEU
53
A
LEU
53
8
1_555
A
MET
54
A
MET
54
8
1_555
A
LEU
78
A
LEU
78
8
1_555
A
SER
79
A
SER
79
8
1_555
A
ALA
80
A
ALA
80
8
1_555
A
LYS
101
A
LYS
101
8
1_555
A
HOH
170
C
HOH
8
1_555
20
C 2 2 21