0.009205
0.005314
0.000000
0.000000
0.010629
0.000000
0.000000
0.000000
0.013378
0.00000
0.00000
0.00000
Chang, J.F.
Hall, B.E.
Tanny, J.C.
Moazed, D.
Filman, D.
Ellenberger, T.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
108.640
108.640
74.750
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
N
N
159
S
C
N
160
N
C
N
161
N
O
N
162
S
C
N
163
N
C
N
164
N
C
N
165
N
C
N
166
N
O
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
N
N
181
S
C
N
182
N
C
N
183
N
O
N
184
N
C
N
185
N
C
N
186
N
C
N
187
N
C
N
188
N
O
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
N
N
203
S
C
N
204
N
C
N
205
N
O
N
206
N
C
N
207
N
C
N
208
N
C
N
209
N
C
N
210
N
N
N
211
N
O
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
N
N
228
S
C
N
229
N
C
N
230
N
O
N
231
N
C
N
232
N
C
N
233
N
S
N
234
N
C
N
235
N
O
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
N
N
248
S
C
N
249
N
C
N
250
N
O
N
251
N
C
Y
252
N
C
Y
253
N
C
Y
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
N
258
N
O
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
N
N
271
S
C
N
272
N
C
N
273
N
O
N
274
N
C
N
275
N
C
N
276
N
C
N
277
N
O
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
N
C
N
292
N
O
N
293
N
O
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
N
N
302
S
C
N
303
N
C
N
304
N
O
N
305
R
C
N
306
N
O
N
307
N
C
N
308
N
O
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
N
C
Y
323
N
C
Y
324
N
C
Y
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
N
329
N
O
N
330
N
O
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
N
N
343
S
C
N
344
N
C
N
345
N
O
N
346
N
C
N
347
N
C
N
348
N
C
N
349
N
O
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
doub
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
doub
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
doub
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
Y
246
N
doub
Y
247
N
sing
Y
248
N
sing
N
249
N
sing
Y
250
N
doub
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
doub
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
doub
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
doub
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
Y
315
N
doub
Y
316
N
sing
Y
317
N
sing
N
318
N
sing
Y
319
N
doub
N
320
N
sing
Y
321
N
doub
N
322
N
sing
Y
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
doub
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
UK
Structure
STRUE6
2005
0969-2126
11
637
649
10.1016/S0969-2126(03)00093-5
12791253
Structure of the Coiled-coil Dimerization Motif of Sir4 and Its Interaction With Sir3
2003
10.2210/pdb1nyh/pdb
pdb_00001nyh
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
110
1
toroidal mirror
CCD
2001-06-21
ADSC QUANTUM 4
Channel-Cut Si(111)Monochromator
MAD
M
x-ray
1
0.97827
1.0
0.978423
1.0
0.95
1.0
X12C
NSLS
0.97827, 0.978423, 0.95
SYNCHROTRON
NSLS BEAMLINE X12C
18652.967
Regulatory protein SIR4
Coiled-coil dimerization domain, residue 1198-1358
1
man
polymer
Silent information regulator 4
no
no
GPLGSKRVPIVEDRRVKQLDDITDSNTTEILTSVDVLGTHSQTGTQQSNMYTSTQKTELEIDNKDSVTECSKDMKEDGLS
FVDIVLSKAASALDEKEKQLAVANEIIRSLSDEVMRNEIRITSLQGDLTFTKKCLENARSQISEKDAKINKLMEKDFQVN
KEIKPY
GPLGSKRVPIVEDRRVKQLDDITDSNTTEILTSVDVLGTHSQTGTQQSNMYTSTQKTELEIDNKDSVTECSKDMKEDGLS
FVDIVLSKAASALDEKEKQLAVANEIIRSLSDEVMRNEIRITSLQGDLTFTKKCLENARSQISEKDAKINKLMEKDFQVN
KEIKPY
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
baker's yeast
Saccharomyces
Escherichia
Escherichia coli
sample
SIR4
4932
Saccharomyces cerevisiae
469008
Escherichia coli BL21(DE3)
BL21(DE3)
Plasmid
pGEX6P
1
3.49
64.78
VAPOR DIFFUSION, HANGING DROP
6.0
PEG 3350, MES, MgCl2, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K
295
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
Data collection
Database references
1
0
2003-06-24
1
1
2008-04-29
1
2
2011-07-13
1
3
2024-02-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
RCSB
Y
RCSB
2003-02-12
REL
REL
n
1
1193
A
n
2
1194
A
n
3
1195
A
n
4
1196
A
n
5
1197
A
n
6
1198
A
n
7
1199
A
n
8
1200
A
n
9
1201
A
n
10
1202
A
n
11
1203
A
n
12
1204
A
n
13
1205
A
n
14
1206
A
n
15
1207
A
n
16
1208
A
n
17
1209
A
n
18
1210
A
n
19
1211
A
n
20
1212
A
n
21
1213
A
n
22
1214
A
n
23
1215
A
n
24
1216
A
n
25
1217
A
n
26
1218
A
n
27
1219
A
n
28
1220
A
n
29
1221
A
n
30
1222
A
n
31
1223
A
n
32
1224
A
n
33
1225
A
n
34
1226
A
n
35
1227
A
n
36
1228
A
n
37
1229
A
n
38
1230
A
n
39
1231
A
n
40
1232
A
n
41
1233
A
n
42
1234
A
n
43
1235
A
n
44
1236
A
n
45
1237
A
n
46
1238
A
n
47
1239
A
n
48
1240
A
n
49
1241
A
n
50
1242
A
n
51
1243
A
n
52
1244
A
n
53
1245
A
n
54
1246
A
n
55
1247
A
n
56
1248
A
n
57
1249
A
n
58
1250
A
n
59
1251
A
n
60
1252
A
n
61
1253
A
n
62
1254
A
n
63
1255
A
n
64
1256
A
n
65
1257
A
n
66
1258
A
n
67
1259
A
n
68
1260
A
n
69
1261
A
n
70
1262
A
n
71
1263
A
n
72
1264
A
n
73
1265
A
n
74
1266
A
n
75
1267
A
n
76
1268
A
n
77
1269
A
n
78
1270
A
ALA
1271
n
79
LEU
1271
A
SER
1272
n
80
SER
1272
A
PHE
1273
n
81
PHE
1273
A
VAL
1274
n
82
VAL
1274
A
ASP
1275
n
83
ASP
1275
A
ILE
1276
n
84
ILE
1276
A
VAL
1277
n
85
VAL
1277
A
LEU
1278
n
86
LEU
1278
A
SER
1279
n
87
SER
1279
A
LYS
1280
n
88
LYS
1280
A
ALA
1281
n
89
ALA
1281
A
ALA
1282
n
90
ALA
1282
A
SER
1283
n
91
SER
1283
A
ALA
1284
n
92
ALA
1284
A
LEU
1285
n
93
LEU
1285
A
ASP
1286
n
94
ASP
1286
A
GLU
1287
n
95
GLU
1287
A
LYS
1288
n
96
LYS
1288
A
GLU
1289
n
97
GLU
1289
A
LYS
1290
n
98
LYS
1290
A
GLN
1291
n
99
GLN
1291
A
LEU
1292
n
100
LEU
1292
A
ALA
1293
n
101
ALA
1293
A
VAL
1294
n
102
VAL
1294
A
ALA
1295
n
103
ALA
1295
A
ASN
1296
n
104
ASN
1296
A
GLU
1297
n
105
GLU
1297
A
ILE
1298
n
106
ILE
1298
A
ILE
1299
n
107
ILE
1299
A
ARG
1300
n
108
ARG
1300
A
SER
1301
n
109
SER
1301
A
LEU
1302
n
110
LEU
1302
A
SER
1303
n
111
SER
1303
A
ASP
1304
n
112
ASP
1304
A
GLU
1305
n
113
GLU
1305
A
VAL
1306
n
114
VAL
1306
A
MET
1307
n
115
MET
1307
A
ARG
1308
n
116
ARG
1308
A
ASN
1309
n
117
ASN
1309
A
GLU
1310
n
118
GLU
1310
A
ILE
1311
n
119
ILE
1311
A
ARG
1312
n
120
ARG
1312
A
ILE
1313
n
121
ILE
1313
A
THR
1314
n
122
THR
1314
A
SER
1315
n
123
SER
1315
A
LEU
1316
n
124
LEU
1316
A
GLN
1317
n
125
GLN
1317
A
GLY
1318
n
126
GLY
1318
A
ASP
1319
n
127
ASP
1319
A
LEU
1320
n
128
LEU
1320
A
THR
1321
n
129
THR
1321
A
PHE
1322
n
130
PHE
1322
A
THR
1323
n
131
THR
1323
A
LYS
1324
n
132
LYS
1324
A
LYS
1325
n
133
LYS
1325
A
CYS
1326
n
134
CYS
1326
A
LEU
1327
n
135
LEU
1327
A
GLU
1328
n
136
GLU
1328
A
ASN
1329
n
137
ASN
1329
A
ALA
1330
n
138
ALA
1330
A
ARG
1331
n
139
ARG
1331
A
SER
1332
n
140
SER
1332
A
GLN
1333
n
141
GLN
1333
A
ILE
1334
n
142
ILE
1334
A
SER
1335
n
143
SER
1335
A
GLU
1336
n
144
GLU
1336
A
LYS
1337
n
145
LYS
1337
A
ASP
1338
n
146
ASP
1338
A
ALA
1339
n
147
ALA
1339
A
LYS
1340
n
148
LYS
1340
A
ILE
1341
n
149
ILE
1341
A
ASN
1342
n
150
ASN
1342
A
LYS
1343
n
151
LYS
1343
A
LEU
1344
n
152
LEU
1344
A
MET
1345
n
153
MET
1345
A
GLU
1346
n
154
GLU
1346
A
n
155
1347
A
n
156
1348
A
n
157
1349
A
n
158
1350
A
n
159
1351
A
n
160
1352
A
n
161
1353
A
n
162
1354
A
n
163
1355
A
n
164
1356
A
n
165
1357
A
n
166
1358
A
author_and_software_defined_assembly
PISA,PQS
2
dimeric
3690
-40
11230
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.5000000000
-0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
10_666
-y+1,-x+1,-z+7/6
crystal symmetry operation
54.3200000000
94.0849998671
87.2083333333
1
A
CG
LEU
1271
A
CG
LEU
79
1
Y
1
A
CD1
LEU
1271
A
CD1
LEU
79
1
Y
1
A
CD2
LEU
1271
A
CD2
LEU
79
1
Y
1
A
GLY
1193
A
GLY
1
1
Y
1
A
PRO
1194
A
PRO
2
1
Y
1
A
LEU
1195
A
LEU
3
1
Y
1
A
GLY
1196
A
GLY
4
1
Y
1
A
SER
1197
A
SER
5
1
Y
1
A
LYS
1198
A
LYS
6
1
Y
1
A
ARG
1199
A
ARG
7
1
Y
1
A
VAL
1200
A
VAL
8
1
Y
1
A
PRO
1201
A
PRO
9
1
Y
1
A
ILE
1202
A
ILE
10
1
Y
1
A
VAL
1203
A
VAL
11
1
Y
1
A
GLU
1204
A
GLU
12
1
Y
1
A
ASP
1205
A
ASP
13
1
Y
1
A
ARG
1206
A
ARG
14
1
Y
1
A
ARG
1207
A
ARG
15
1
Y
1
A
VAL
1208
A
VAL
16
1
Y
1
A
LYS
1209
A
LYS
17
1
Y
1
A
GLN
1210
A
GLN
18
1
Y
1
A
LEU
1211
A
LEU
19
1
Y
1
A
ASP
1212
A
ASP
20
1
Y
1
A
ASP
1213
A
ASP
21
1
Y
1
A
ILE
1214
A
ILE
22
1
Y
1
A
THR
1215
A
THR
23
1
Y
1
A
ASP
1216
A
ASP
24
1
Y
1
A
SER
1217
A
SER
25
1
Y
1
A
ASN
1218
A
ASN
26
1
Y
1
A
THR
1219
A
THR
27
1
Y
1
A
THR
1220
A
THR
28
1
Y
1
A
GLU
1221
A
GLU
29
1
Y
1
A
ILE
1222
A
ILE
30
1
Y
1
A
LEU
1223
A
LEU
31
1
Y
1
A
THR
1224
A
THR
32
1
Y
1
A
SER
1225
A
SER
33
1
Y
1
A
VAL
1226
A
VAL
34
1
Y
1
A
ASP
1227
A
ASP
35
1
Y
1
A
VAL
1228
A
VAL
36
1
Y
1
A
LEU
1229
A
LEU
37
1
Y
1
A
GLY
1230
A
GLY
38
1
Y
1
A
THR
1231
A
THR
39
1
Y
1
A
HIS
1232
A
HIS
40
1
Y
1
A
SER
1233
A
SER
41
1
Y
1
A
GLN
1234
A
GLN
42
1
Y
1
A
THR
1235
A
THR
43
1
Y
1
A
GLY
1236
A
GLY
44
1
Y
1
A
THR
1237
A
THR
45
1
Y
1
A
GLN
1238
A
GLN
46
1
Y
1
A
GLN
1239
A
GLN
47
1
Y
1
A
SER
1240
A
SER
48
1
Y
1
A
ASN
1241
A
ASN
49
1
Y
1
A
MET
1242
A
MET
50
1
Y
1
A
TYR
1243
A
TYR
51
1
Y
1
A
THR
1244
A
THR
52
1
Y
1
A
SER
1245
A
SER
53
1
Y
1
A
THR
1246
A
THR
54
1
Y
1
A
GLN
1247
A
GLN
55
1
Y
1
A
LYS
1248
A
LYS
56
1
Y
1
A
THR
1249
A
THR
57
1
Y
1
A
GLU
1250
A
GLU
58
1
Y
1
A
LEU
1251
A
LEU
59
1
Y
1
A
GLU
1252
A
GLU
60
1
Y
1
A
ILE
1253
A
ILE
61
1
Y
1
A
ASP
1254
A
ASP
62
1
Y
1
A
ASN
1255
A
ASN
63
1
Y
1
A
LYS
1256
A
LYS
64
1
Y
1
A
ASP
1257
A
ASP
65
1
Y
1
A
SER
1258
A
SER
66
1
Y
1
A
VAL
1259
A
VAL
67
1
Y
1
A
THR
1260
A
THR
68
1
Y
1
A
GLU
1261
A
GLU
69
1
Y
1
A
CYS
1262
A
CYS
70
1
Y
1
A
SER
1263
A
SER
71
1
Y
1
A
LYS
1264
A
LYS
72
1
Y
1
A
ASP
1265
A
ASP
73
1
Y
1
A
MET
1266
A
MET
74
1
Y
1
A
LYS
1267
A
LYS
75
1
Y
1
A
GLU
1268
A
GLU
76
1
Y
1
A
ASP
1269
A
ASP
77
1
Y
1
A
GLY
1270
A
GLY
78
1
Y
1
A
LYS
1347
A
LYS
155
1
Y
1
A
ASP
1348
A
ASP
156
1
Y
1
A
PHE
1349
A
PHE
157
1
Y
1
A
GLN
1350
A
GLN
158
1
Y
1
A
VAL
1351
A
VAL
159
1
Y
1
A
ASN
1352
A
ASN
160
1
Y
1
A
LYS
1353
A
LYS
161
1
Y
1
A
GLU
1354
A
GLU
162
1
Y
1
A
ILE
1355
A
ILE
163
1
Y
1
A
LYS
1356
A
LYS
164
1
Y
1
A
PRO
1357
A
PRO
165
1
Y
1
A
TYR
1358
A
TYR
166
1
Y
1
5.41
0.90
118.30
123.71
A
A
A
CB
CG
OD2
ASP
ASP
ASP
1275
1275
1275
N
1
6.02
0.90
118.30
124.32
A
A
A
CB
CG
OD2
ASP
ASP
ASP
1304
1304
1304
N
1
A
GLU
1336
-70.52
-71.38
1
A
LYS
1337
-39.76
-32.59
1
A
LEU
1344
-85.80
43.40
54.993
2.18
1.09
0.00
2.18
0.00
-3.26
0.839
0.833
0.28797
0.27074
0.27254
0.27254
3.10
47.14
501
5054
4290
10.5
100.00
14.439
0.254
RANDOM
1
THROUGHOUT
1
MAD
0.425
0.345
0.80
0.80
1.40
MAXIMUM LIKELIHOOD WITH PHASES
BABINET MODEL WITH MASK
3.10
47.14
0
592
0
0
592
0.013
0.022
596
1.184
1.985
796
4.448
5.000
75
0.073
0.200
97
0.004
0.020
422
0.263
0.200
280
0.126
0.200
26
0.207
0.200
71
0.114
0.200
2
0.345
0.347
3.184
44
277
20
3.1
47.14
1NYH
5054
4796
1
1
0.066
1
33.3
11.20
95
0.303
3.10
3.21
9.2
1
5.6
97.2
refinement
REFMAC
5.1.19
data reduction
DENZO
data scaling
SCALEPACK
phasing
SOLVE
Crystal Structure of the Coiled-coil Dimerization Motif of Sir4
1
N
N
The biological assembly is a dimer generated from the monomer in the asymmetric unit by the operations: -y, -x, 1/6+z and a translation of +1 along a, b and c axes.
A
SER
1272
A
SER
80
HELX_P
A
LEU
1344
A
LEU
152
1
1
73
Transcription repressor
coiled-coil, Transcription regulation, Repressor, Transcription repressor
SIR4_YEAST
UNP
1
1198
P11978
KRVPIVEDRRVKQLDDITDSNTTEILTSVDVLGTHSQTGTQQSNMYTSTQKTELEIDNKDSVTECSKDMKEDGLSFVDIV
LSKAASALDEKEKQLAVANEIIRSLSDEVMRNEIRITSLQGDLTFTKKCLENARSQISEKDAKINKLMEKDFQVNKEIKP
Y
1198
1358
1NYH
1198
1358
P11978
A
1
6
166
1
cloning artifact
GLY
1193
1NYH
A
P11978
UNP
1
1
cloning artifact
PRO
1194
1NYH
A
P11978
UNP
2
1
cloning artifact
LEU
1195
1NYH
A
P11978
UNP
3
1
cloning artifact
GLY
1196
1NYH
A
P11978
UNP
4
1
cloning artifact
SER
1197
1NYH
A
P11978
UNP
5
179
P 65 2 2