0.012048
0.000000
0.000000
0.000000
0.012048
0.000000
0.000000
0.000000
0.012048
0.00000
0.00000
0.00000
Bagautdinov, B.
Miyano, M.
Tahirov, T.H.
RIKEN Structural Genomics/Proteomics Initiative (RSGI)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
24
90.00
90.00
90.00
83.003
83.003
83.003
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cl -1
35.453
CHLORIDE ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Na 1
22.990
SODIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CL
N
75
N
N
N
76
R
C
N
77
N
C
N
78
N
O
N
79
N
C
N
80
N
S
N
81
N
O
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
N
N
90
S
C
N
91
N
C
N
92
N
O
N
93
N
C
N
94
N
C
N
95
N
C
N
96
N
O
N
97
N
N
N
98
N
O
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
N
N
110
S
C
N
111
N
C
N
112
N
O
N
113
N
C
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
O
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
N
N
129
N
C
N
130
N
C
N
131
N
O
N
132
N
O
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
C
N
139
N
O
N
140
N
C
N
141
N
O
N
142
N
C
N
143
N
O
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
N
N
153
S
C
N
154
N
C
N
155
N
O
N
156
N
C
Y
157
N
C
Y
158
N
N
Y
159
N
C
Y
160
N
C
Y
161
N
N
N
162
N
O
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
O
N
174
N
H
N
175
N
H
N
176
N
N
N
177
S
C
N
178
N
C
N
179
N
O
N
180
S
C
N
181
N
C
N
182
N
C
N
183
N
C
N
184
N
O
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
N
N
199
S
C
N
200
N
C
N
201
N
O
N
202
N
C
N
203
N
C
N
204
N
C
N
205
N
C
N
206
N
O
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
N
N
221
S
C
N
222
N
C
N
223
N
O
N
224
N
C
N
225
N
C
N
226
N
C
N
227
N
C
N
228
N
N
N
229
N
O
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
N
N
246
S
C
N
247
N
C
N
248
N
O
N
249
N
C
N
250
N
C
N
251
N
S
N
252
N
C
N
253
N
O
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
NA
N
266
N
N
N
267
S
C
N
268
N
C
N
269
N
O
N
270
N
C
Y
271
N
C
Y
272
N
C
Y
273
N
C
Y
274
N
C
Y
275
N
C
Y
276
N
C
N
277
N
O
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
N
N
290
S
C
N
291
N
C
N
292
N
O
N
293
N
C
N
294
N
C
N
295
N
C
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
N
N
307
S
C
N
308
N
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
O
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
S
N
321
N
O
N
322
N
O
N
323
N
O
N
324
N
O
N
325
N
N
N
326
S
C
N
327
N
C
N
328
N
O
N
329
R
C
N
330
N
O
N
331
N
C
N
332
N
O
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
N
N
343
S
C
N
344
N
C
N
345
N
O
N
346
N
C
Y
347
N
C
Y
348
N
C
Y
349
N
C
Y
350
N
N
Y
351
N
C
Y
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
N
356
N
O
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
N
N
370
S
C
N
371
N
C
N
372
N
O
N
373
N
C
Y
374
N
C
Y
375
N
C
Y
376
N
C
Y
377
N
C
Y
378
N
C
Y
379
N
C
N
380
N
O
N
381
N
O
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
N
N
394
S
C
N
395
N
C
N
396
N
O
N
397
N
C
N
398
N
C
N
399
N
C
N
400
N
O
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
Y
153
N
sing
Y
154
N
doub
Y
155
N
doub
N
156
N
sing
Y
157
N
sing
N
158
N
sing
Y
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
doub
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
doub
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
doub
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
doub
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
Y
261
N
doub
Y
262
N
sing
Y
263
N
sing
N
264
N
sing
Y
265
N
doub
N
266
N
sing
Y
267
N
doub
N
268
N
sing
Y
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
doub
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
doub
N
304
N
doub
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
doub
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
doub
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
Y
334
N
doub
Y
335
N
sing
Y
336
N
sing
N
337
N
sing
Y
338
N
doub
Y
339
N
sing
Y
340
N
sing
N
341
N
sing
Y
342
N
sing
Y
343
N
doub
N
344
N
sing
Y
345
N
doub
N
346
N
sing
Y
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
doub
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
Y
362
N
doub
Y
363
N
sing
Y
364
N
sing
N
365
N
sing
Y
366
N
doub
N
367
N
sing
Y
368
N
doub
N
369
N
sing
Y
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
doub
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
DK
Acta Crystallogr.,Sect.F
1744-3091
70
404
413
10.1107/S2053230X14003422
24699729
The structures of the CutA1 proteins from Thermus thermophilus and Pyrococcus horikoshii: characterization of metal-binding sites and metal-induced assembly.
2014
10.2210/pdb1nza/pdb
pdb_00001nza
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
mirrors
CCD
2002-01-27
MARRESEARCH
FIXED EXIT DOUBLE CRYSTAL
SINGLE WAVELENGTH
M
x-ray
1
0.9
1.0
BL44B2
SPring-8
0.9
SYNCHROTRON
SPRING-8 BEAMLINE BL44B2
11635.439
Divalent cation tolerance protein
1
man
polymer
22.990
SODIUM ION
2
syn
non-polymer
35.453
CHLORIDE ION
4
syn
non-polymer
96.063
SULFATE ION
1
syn
non-polymer
92.094
GLYCEROL
1
syn
non-polymer
18.015
water
84
nat
water
CutA
no
no
MEEVVLITVPSEEVARTIAKALVEERLAACVNIVPGLTSIYRWQGEVVEDQELLLLVKTTTHAFPKLKERVKALHPYTVP
EIVALPIAEGNREYLDWLRENTG
MEEVVLITVPSEEVARTIAKALVEERLAACVNIVPGLTSIYRWQGEVVEDQELLLLVKTTTHAFPKLKERVKALHPYTVP
EIVALPIAEGNREYLDWLRENTG
A
ttk003001193.1
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Thermus
Escherichia
Escherichia coli
sample
274
Thermus thermophilus
469008
Escherichia coli BL21(DE3)
BL21(DE3)
plasmid
pET11a
1
1.85
32.99
MICROBATCH
6.6
NA ACETATE 1.65M, MES 0.1M , pH 6.6, MICROBATCH, temperature 295K
295
RIKEN Structural Genomics/Proteomics Initiative
RSGI
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
Database references
Data collection
Database references
Derived calculations
Refinement description
1
0
2003-03-11
1
1
2008-04-29
1
2
2011-07-13
1
3
2014-05-07
1
4
2023-10-25
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_symmetry
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
RCSB
Y
PDBJ
2003-02-17
REL
REL
NA
SODIUM ION
CL
CHLORIDE ION
SO4
SULFATE ION
GOL
GLYCEROL
HOH
water
1KR4
PDB
experimental model
NA
104
2
NA
NA
104
A
NA
105
2
NA
NA
105
A
CL
108
3
CL
CL
108
A
CL
109
3
CL
CL
109
A
CL
110
3
CL
CL
110
A
CL
111
3
CL
CL
111
A
SO4
200
4
SO4
SO4
200
A
GOL
500
5
GOL
GOL
500
A
HOH
1
6
HOH
HOH
501
A
HOH
2
6
HOH
HOH
502
A
HOH
3
6
HOH
HOH
503
A
HOH
4
6
HOH
HOH
504
A
HOH
5
6
HOH
HOH
505
A
HOH
6
6
HOH
HOH
506
A
HOH
7
6
HOH
HOH
507
A
HOH
8
6
HOH
HOH
508
A
HOH
9
6
HOH
HOH
509
A
HOH
10
6
HOH
HOH
510
A
HOH
11
6
HOH
HOH
511
A
HOH
12
6
HOH
HOH
512
A
HOH
13
6
HOH
HOH
513
A
HOH
14
6
HOH
HOH
514
A
HOH
15
6
HOH
HOH
515
A
HOH
16
6
HOH
HOH
516
A
HOH
17
6
HOH
HOH
517
A
HOH
18
6
HOH
HOH
518
A
HOH
19
6
HOH
HOH
519
A
HOH
20
6
HOH
HOH
520
A
HOH
21
6
HOH
HOH
521
A
HOH
22
6
HOH
HOH
522
A
HOH
23
6
HOH
HOH
523
A
HOH
24
6
HOH
HOH
524
A
HOH
25
6
HOH
HOH
525
A
HOH
26
6
HOH
HOH
526
A
HOH
27
6
HOH
HOH
527
A
HOH
28
6
HOH
HOH
528
A
HOH
29
6
HOH
HOH
529
A
HOH
30
6
HOH
HOH
530
A
HOH
31
6
HOH
HOH
531
A
HOH
32
6
HOH
HOH
532
A
HOH
33
6
HOH
HOH
533
A
HOH
34
6
HOH
HOH
534
A
HOH
35
6
HOH
HOH
535
A
HOH
36
6
HOH
HOH
536
A
HOH
37
6
HOH
HOH
537
A
HOH
38
6
HOH
HOH
538
A
HOH
39
6
HOH
HOH
539
A
HOH
40
6
HOH
HOH
540
A
HOH
41
6
HOH
HOH
541
A
HOH
42
6
HOH
HOH
542
A
HOH
43
6
HOH
HOH
543
A
HOH
44
6
HOH
HOH
544
A
HOH
45
6
HOH
HOH
545
A
HOH
46
6
HOH
HOH
546
A
HOH
47
6
HOH
HOH
547
A
HOH
48
6
HOH
HOH
548
A
HOH
49
6
HOH
HOH
549
A
HOH
50
6
HOH
HOH
550
A
HOH
51
6
HOH
HOH
551
A
HOH
52
6
HOH
HOH
552
A
HOH
53
6
HOH
HOH
553
A
HOH
54
6
HOH
HOH
554
A
HOH
55
6
HOH
HOH
555
A
HOH
56
6
HOH
HOH
556
A
HOH
57
6
HOH
HOH
557
A
HOH
58
6
HOH
HOH
558
A
HOH
59
6
HOH
HOH
559
A
HOH
60
6
HOH
HOH
560
A
HOH
61
6
HOH
HOH
561
A
HOH
62
6
HOH
HOH
562
A
HOH
63
6
HOH
HOH
563
A
HOH
64
6
HOH
HOH
564
A
HOH
65
6
HOH
HOH
565
A
HOH
66
6
HOH
HOH
566
A
HOH
67
6
HOH
HOH
567
A
HOH
68
6
HOH
HOH
568
A
HOH
69
6
HOH
HOH
569
A
HOH
70
6
HOH
HOH
570
A
HOH
71
6
HOH
HOH
571
A
HOH
72
6
HOH
HOH
572
A
HOH
73
6
HOH
HOH
573
A
HOH
74
6
HOH
HOH
574
A
HOH
75
6
HOH
HOH
575
A
HOH
76
6
HOH
HOH
576
A
HOH
77
6
HOH
HOH
577
A
HOH
78
6
HOH
HOH
578
A
HOH
79
6
HOH
HOH
579
A
HOH
80
6
HOH
HOH
580
A
HOH
81
6
HOH
HOH
581
A
HOH
82
6
HOH
HOH
582
A
HOH
83
6
HOH
HOH
583
A
HOH
84
6
HOH
HOH
584
A
MET
1
n
1
MET
1
A
GLU
2
n
2
GLU
2
A
GLU
3
n
3
GLU
3
A
VAL
4
n
4
VAL
4
A
VAL
5
n
5
VAL
5
A
LEU
6
n
6
LEU
6
A
ILE
7
n
7
ILE
7
A
THR
8
n
8
THR
8
A
VAL
9
n
9
VAL
9
A
PRO
10
n
10
PRO
10
A
SER
11
n
11
SER
11
A
GLU
12
n
12
GLU
12
A
GLU
13
n
13
GLU
13
A
VAL
14
n
14
VAL
14
A
ALA
15
n
15
ALA
15
A
ARG
16
n
16
ARG
16
A
THR
17
n
17
THR
17
A
ILE
18
n
18
ILE
18
A
ALA
19
n
19
ALA
19
A
LYS
20
n
20
LYS
20
A
ALA
21
n
21
ALA
21
A
LEU
22
n
22
LEU
22
A
VAL
23
n
23
VAL
23
A
GLU
24
n
24
GLU
24
A
GLU
25
n
25
GLU
25
A
ARG
26
n
26
ARG
26
A
LEU
27
n
27
LEU
27
A
ALA
28
n
28
ALA
28
A
ALA
29
n
29
ALA
29
A
CYS
30
n
30
CYS
30
A
VAL
31
n
31
VAL
31
A
ASN
32
n
32
ASN
32
A
ILE
33
n
33
ILE
33
A
VAL
34
n
34
VAL
34
A
PRO
35
n
35
PRO
35
A
GLY
36
n
36
GLY
36
A
LEU
37
n
37
LEU
37
A
THR
38
n
38
THR
38
A
SER
39
n
39
SER
39
A
ILE
40
n
40
ILE
40
A
TYR
41
n
41
TYR
41
A
ARG
42
n
42
ARG
42
A
TRP
43
n
43
TRP
43
A
GLN
44
n
44
GLN
44
A
GLY
45
n
45
GLY
45
A
GLU
46
n
46
GLU
46
A
VAL
47
n
47
VAL
47
A
VAL
48
n
48
VAL
48
A
GLU
49
n
49
GLU
49
A
ASP
50
n
50
ASP
50
A
GLN
51
n
51
GLN
51
A
GLU
52
n
52
GLU
52
A
LEU
53
n
53
LEU
53
A
LEU
54
n
54
LEU
54
A
LEU
55
n
55
LEU
55
A
LEU
56
n
56
LEU
56
A
VAL
57
n
57
VAL
57
A
LYS
58
n
58
LYS
58
A
THR
59
n
59
THR
59
A
THR
60
n
60
THR
60
A
THR
61
n
61
THR
61
A
HIS
62
n
62
HIS
62
A
ALA
63
n
63
ALA
63
A
PHE
64
n
64
PHE
64
A
PRO
65
n
65
PRO
65
A
LYS
66
n
66
LYS
66
A
LEU
67
n
67
LEU
67
A
LYS
68
n
68
LYS
68
A
GLU
69
n
69
GLU
69
A
ARG
70
n
70
ARG
70
A
VAL
71
n
71
VAL
71
A
LYS
72
n
72
LYS
72
A
ALA
73
n
73
ALA
73
A
LEU
74
n
74
LEU
74
A
HIS
75
n
75
HIS
75
A
PRO
76
n
76
PRO
76
A
TYR
77
n
77
TYR
77
A
THR
78
n
78
THR
78
A
VAL
79
n
79
VAL
79
A
PRO
80
n
80
PRO
80
A
GLU
81
n
81
GLU
81
A
ILE
82
n
82
ILE
82
A
VAL
83
n
83
VAL
83
A
ALA
84
n
84
ALA
84
A
LEU
85
n
85
LEU
85
A
PRO
86
n
86
PRO
86
A
ILE
87
n
87
ILE
87
A
ALA
88
n
88
ALA
88
A
GLU
89
n
89
GLU
89
A
GLY
90
n
90
GLY
90
A
ASN
91
n
91
ASN
91
A
ARG
92
n
92
ARG
92
A
GLU
93
n
93
GLU
93
A
TYR
94
n
94
TYR
94
A
LEU
95
n
95
LEU
95
A
ASP
96
n
96
ASP
96
A
TRP
97
n
97
TRP
97
A
LEU
98
n
98
LEU
98
A
ARG
99
n
99
ARG
99
A
GLU
100
n
100
GLU
100
A
ASN
101
n
101
ASN
101
A
THR
102
n
102
THR
102
A
GLY
103
n
103
GLY
103
A
author_and_software_defined_assembly
PISA
3
trimeric
software_defined_assembly
PQS
12
dodecameric
10140
-219
12380
A
THR
8
A
OG1
THR
8
1_555
A
NA
104
B
NA
NA
1_555
A
GLU
52
A
OE1
GLU
52
1_555
93.4
A
THR
8
A
OG1
THR
8
1_555
A
NA
104
B
NA
NA
1_555
A
GLU
52
A
OE2
GLU
52
1_555
96.4
A
GLU
52
A
OE1
GLU
52
1_555
A
NA
104
B
NA
NA
1_555
A
GLU
52
A
OE2
GLU
52
1_555
54.0
A
THR
8
A
OG1
THR
8
1_555
A
NA
104
B
NA
NA
1_555
A
HOH
510
J
O
HOH
1_555
175.5
A
GLU
52
A
OE1
GLU
52
1_555
A
NA
104
B
NA
NA
1_555
A
HOH
510
J
O
HOH
1_555
86.0
A
GLU
52
A
OE2
GLU
52
1_555
A
NA
104
B
NA
NA
1_555
A
HOH
510
J
O
HOH
1_555
86.9
A
THR
8
A
OG1
THR
8
1_555
A
NA
104
B
NA
NA
1_555
A
HOH
520
J
O
HOH
1_555
84.8
A
GLU
52
A
OE1
GLU
52
1_555
A
NA
104
B
NA
NA
1_555
A
HOH
520
J
O
HOH
1_555
97.2
A
GLU
52
A
OE2
GLU
52
1_555
A
NA
104
B
NA
NA
1_555
A
HOH
520
J
O
HOH
1_555
151.1
A
HOH
510
J
O
HOH
1_555
A
NA
104
B
NA
NA
1_555
A
HOH
520
J
O
HOH
1_555
90.8
A
ASP
50
A
OD1
ASP
50
1_555
A
NA
105
C
NA
NA
1_555
A
ASP
50
A
OD1
ASP
50
3_656
179.1
A
ASP
50
A
OD1
ASP
50
1_555
A
NA
105
C
NA
NA
1_555
A
HOH
501
J
O
HOH
1_555
99.0
A
ASP
50
A
OD1
ASP
50
3_656
A
NA
105
C
NA
NA
1_555
A
HOH
501
J
O
HOH
1_555
81.3
A
ASP
50
A
OD1
ASP
50
1_555
A
NA
105
C
NA
NA
1_555
A
HOH
501
J
O
HOH
3_656
80.9
A
ASP
50
A
OD1
ASP
50
3_656
A
NA
105
C
NA
NA
1_555
A
HOH
501
J
O
HOH
3_656
98.2
A
HOH
501
J
O
HOH
1_555
A
NA
105
C
NA
NA
1_555
A
HOH
501
J
O
HOH
3_656
89.3
A
ASP
50
A
OD1
ASP
50
1_555
A
NA
105
C
NA
NA
1_555
A
HOH
502
J
O
HOH
1_555
89.0
A
ASP
50
A
OD1
ASP
50
3_656
A
NA
105
C
NA
NA
1_555
A
HOH
502
J
O
HOH
1_555
91.9
A
HOH
501
J
O
HOH
1_555
A
NA
105
C
NA
NA
1_555
A
HOH
502
J
O
HOH
1_555
89.0
A
HOH
501
J
O
HOH
3_656
A
NA
105
C
NA
NA
1_555
A
HOH
502
J
O
HOH
1_555
169.4
A
ASP
50
A
OD1
ASP
50
1_555
A
NA
105
C
NA
NA
1_555
A
HOH
502
J
O
HOH
3_656
91.4
A
ASP
50
A
OD1
ASP
50
3_656
A
NA
105
C
NA
NA
1_555
A
HOH
502
J
O
HOH
3_656
88.3
A
HOH
501
J
O
HOH
1_555
A
NA
105
C
NA
NA
1_555
A
HOH
502
J
O
HOH
3_656
168.8
A
HOH
501
J
O
HOH
3_656
A
NA
105
C
NA
NA
1_555
A
HOH
502
J
O
HOH
3_656
88.0
A
HOH
502
J
O
HOH
1_555
A
NA
105
C
NA
NA
1_555
A
HOH
502
J
O
HOH
3_656
95.5
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
8_656
-z+1,x,-y+1
crystal symmetry operation
83.0030000000
0.0000000000
83.0030000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
-1.0000000000
0.0000000000
0.0000000000
11_566
y,-z+1,-x+1
crystal symmetry operation
0.0000000000
83.0030000000
83.0030000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_665
-x+1,-y+1,z
crystal symmetry operation
83.0030000000
83.0030000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
3_656
-x+1,y,-z+1
crystal symmetry operation
83.0030000000
0.0000000000
83.0030000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_566
x,-y+1,-z+1
crystal symmetry operation
0.0000000000
83.0030000000
83.0030000000
0.0000000000
0.0000000000
1.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
5_555
z,x,y
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
6_566
z,-x+1,-y+1
crystal symmetry operation
0.0000000000
83.0030000000
83.0030000000
0.0000000000
0.0000000000
-1.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
7_665
-z+1,-x+1,y
crystal symmetry operation
83.0030000000
83.0030000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1.0000000000
0.0000000000
0.0000000000
9_555
y,z,x
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
-1.0000000000
0.0000000000
0.0000000000
10_656
-y+1,z,-x+1
crystal symmetry operation
83.0030000000
0.0000000000
83.0030000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
1.0000000000
0.0000000000
0.0000000000
12_665
-y+1,-z+1,x
crystal symmetry operation
83.0030000000
83.0030000000
0.0000000000
A
N
SER
39
A
N
SER
39
A
O
ASP
50
A
O
ASP
50
A
O
LEU
55
A
O
LEU
55
A
N
ILE
7
A
N
ILE
7
A
N
LEU
6
A
N
LEU
6
A
O
VAL
83
A
O
VAL
83
1
A
NA
105
C
NA
1
A
HOH
577
J
HOH
1
A
HOH
581
J
HOH
1
A
THR
59
-146.21
-159.82
1
A
VAL
79
-113.60
76.47
27.7
0.0
0.0
0.0
0.0
0.0
0.0
0.246
0.229
1.7
40.0
544
10616
10452
98.3
RANDOM
1
THROUGHOUT
0
MOLECULAR REPLACEMENT
1KR4
Engh & Huber
0.27
0.23
5.00
0.22
0.20
1.7
40.0
84
920
17
0
819
1.3
0.005
19.8
1.7
40.0
1NZA
230767
230757
0.0
0.0
0.073
1
51.26
21.7
99.8
0.479
1.70
1.76
7.9
1030
1
2.9
100
data collection
HKL-2000
data scaling
SCALEPACK
refinement
CNS
1.1
data reduction
HKL-2000
phasing
CNS
1.1
Divalent cation tolerance protein (Cut A1) from thermus thermophilus HB8
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
4
N
N
5
N
N
6
N
N
A
SER
11
A
SER
11
HELX_P
A
GLU
25
A
GLU
25
1
1
15
A
ALA
63
A
ALA
63
HELX_P
A
HIS
75
A
HIS
75
1
2
13
A
ASN
91
A
ASN
91
HELX_P
A
ASN
101
A
ASN
101
1
3
11
metalc
2.293
A
THR
8
A
OG1
THR
8
1_555
A
NA
104
B
NA
NA
1_555
metalc
2.220
A
ASP
50
A
OD1
ASP
50
1_555
A
NA
105
C
NA
NA
1_555
metalc
2.225
A
ASP
50
A
OD1
ASP
50
3_656
A
NA
105
C
NA
NA
1_555
metalc
2.424
A
GLU
52
A
OE1
GLU
52
1_555
A
NA
104
B
NA
NA
1_555
metalc
2.418
A
GLU
52
A
OE2
GLU
52
1_555
A
NA
104
B
NA
NA
1_555
metalc
2.404
A
NA
104
B
NA
NA
1_555
A
HOH
510
J
O
HOH
1_555
metalc
2.533
A
NA
104
B
NA
NA
1_555
A
HOH
520
J
O
HOH
1_555
metalc
2.360
A
NA
105
C
NA
NA
1_555
A
HOH
501
J
O
HOH
1_555
metalc
2.381
A
NA
105
C
NA
NA
1_555
A
HOH
501
J
O
HOH
3_656
metalc
2.397
A
NA
105
C
NA
NA
1_555
A
HOH
502
J
O
HOH
1_555
metalc
2.421
A
NA
105
C
NA
NA
1_555
A
HOH
502
J
O
HOH
3_656
structural genomics, unknown function
CutA, Cellular tolerance, Monomer, structural genomics, RIKEN Structural Genomics/Proteomics Initiative, RSGI, unknown function
CUTA_THET8
UNP
1
1
Q7SIA8
1
103
1NZA
1
103
Q7SIA8
A
1
1
103
4
anti-parallel
anti-parallel
anti-parallel
A
CYS
30
A
CYS
30
A
ARG
42
A
ARG
42
A
VAL
47
A
VAL
47
A
THR
60
A
THR
60
A
GLU
2
A
GLU
2
A
VAL
9
A
VAL
9
A
ILE
82
A
ILE
82
A
PRO
86
A
PRO
86
BINDING SITE FOR RESIDUE NA A 104
A
NA
104
Software
5
BINDING SITE FOR RESIDUE NA A 105
A
NA
105
Software
6
BINDING SITE FOR RESIDUE CL A 108
A
CL
108
Software
2
BINDING SITE FOR RESIDUE CL A 109
A
CL
109
Software
1
BINDING SITE FOR RESIDUE CL A 110
A
CL
110
Software
3
BINDING SITE FOR RESIDUE CL A 111
A
CL
111
Software
2
BINDING SITE FOR RESIDUE SO4 A 200
A
SO4
200
Software
5
BINDING SITE FOR RESIDUE GOL A 500
A
GOL
500
Software
9
A
THR
8
A
THR
8
5
1_555
A
GLU
52
A
GLU
52
5
1_555
A
CL
109
E
CL
5
1_555
A
HOH
510
J
HOH
5
1_555
A
HOH
520
J
HOH
5
1_555
A
ASP
50
A
ASP
50
6
3_656
A
ASP
50
A
ASP
50
6
1_555
A
HOH
501
J
HOH
6
1_555
A
HOH
501
J
HOH
6
3_656
A
HOH
502
J
HOH
6
3_656
A
HOH
502
J
HOH
6
1_555
A
GLY
36
A
GLY
36
2
1_555
A
HOH
509
J
HOH
2
1_555
A
NA
104
B
NA
1
1_555
A
GLU
12
A
GLU
12
3
3_656
A
GOL
500
I
GOL
3
1_555
A
HOH
517
J
HOH
3
1_555
A
GLN
44
A
GLN
44
2
1_555
A
TRP
97
A
TRP
97
2
11_566
A
MET
1
A
MET
1
5
1_555
A
GLU
2
A
GLU
2
5
1_555
A
GLU
25
A
GLU
25
5
22_655
A
ARG
70
A
ARG
70
5
22_655
A
HOH
521
J
HOH
5
1_555
A
GLY
36
A
GLY
36
9
1_555
A
LEU
37
A
LEU
37
9
1_555
A
THR
38
A
THR
38
9
1_555
A
GLN
51
A
GLN
51
9
1_555
A
GLN
51
A
GLN
51
9
3_656
A
CL
110
F
CL
9
1_555
A
HOH
509
J
HOH
9
1_555
A
HOH
561
J
HOH
9
1_555
A
HOH
580
J
HOH
9
1_555
197
I 2 3