0.009968 0.000000 0.000000 0.000000 0.014608 0.000000 0.000000 0.000000 0.033634 0.00000 0.00000 0.00000 Lubman, O.Y. Waksman, G. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 100.321 68.455 29.732 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Cl -1 35.453 CHLORIDE ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C8 H18 O5 194.226 TETRAETHYLENE GLYCOL non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C9 H12 N O6 P 261.168 n O-PHOSPHOTYROSINE PHOSPHONOTYROSINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N CL N 75 N N N 76 R C N 77 N C N 78 N O N 79 N C N 80 N S N 81 N O N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N N N 90 S C N 91 N C N 92 N O N 93 N C N 94 N C N 95 N C N 96 N O N 97 N N N 98 N O N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N N N 110 S C N 111 N C N 112 N O N 113 N C N 114 N C N 115 N C N 116 N O N 117 N O N 118 N O N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N N N 129 N C N 130 N C N 131 N O N 132 N O N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N N N 139 S C N 140 N C N 141 N O N 142 N C Y 143 N C Y 144 N N Y 145 N C Y 146 N C Y 147 N N N 148 N O N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N O N 160 N H N 161 N H N 162 N N N 163 S C N 164 N C N 165 N O N 166 S C N 167 N C N 168 N C N 169 N C N 170 N O N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N N N 185 S C N 186 N C N 187 N O N 188 N C N 189 N C N 190 N C N 191 N C N 192 N O N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N N N 207 S C N 208 N C N 209 N O N 210 N C N 211 N C N 212 N C N 213 N C N 214 N N N 215 N O N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N O N 232 N C N 233 N C N 234 N O N 235 N C N 236 N C N 237 N O N 238 N C N 239 N C N 240 N O N 241 N C N 242 N C N 243 N O N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N N N 263 S C N 264 N C N 265 N O N 266 N C Y 267 N C Y 268 N C Y 269 N C Y 270 N C Y 271 N C Y 272 N C N 273 N O N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N N N 286 S C N 287 N C N 288 N O N 289 N C N 290 N C N 291 N C N 292 N O N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N N N 303 S C N 304 N C N 305 N O N 306 N O N 307 N C Y 308 N C Y 309 N C Y 310 N C Y 311 N C Y 312 N C Y 313 N C N 314 N O N 315 N P N 316 N O N 317 N O N 318 N O N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N N N 332 S C N 333 N C N 334 N O N 335 N C N 336 N O N 337 N O N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N N N 346 S C N 347 N C N 348 N O N 349 R C N 350 N O N 351 N C N 352 N O N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N N N 363 S C N 364 N C N 365 N O N 366 N C Y 367 N C Y 368 N C Y 369 N C Y 370 N N Y 371 N C Y 372 N C Y 373 N C Y 374 N C Y 375 N C N 376 N O N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N N N 390 S C N 391 N C N 392 N O N 393 N C Y 394 N C Y 395 N C Y 396 N C Y 397 N C Y 398 N C Y 399 N C N 400 N O N 401 N O N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N N N 414 S C N 415 N C N 416 N O N 417 N C N 418 N C N 419 N C N 420 N O N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N doub N 255 N sing N 256 N sing N 257 N sing N 258 N sing Y 259 N doub Y 260 N sing Y 261 N sing N 262 N sing Y 263 N doub N 264 N sing Y 265 N doub N 266 N sing Y 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N doub N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N doub N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing Y 300 N doub Y 301 N sing Y 302 N sing N 303 N sing Y 304 N doub N 305 N sing Y 306 N doub N 307 N sing Y 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N doub N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N doub N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N doub N 353 N sing N 354 N sing N 355 N sing N 356 N sing Y 357 N doub Y 358 N sing Y 359 N sing N 360 N sing Y 361 N doub Y 362 N sing Y 363 N sing N 364 N sing Y 365 N sing Y 366 N doub N 367 N sing Y 368 N doub N 369 N sing Y 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N doub N 381 N sing N 382 N sing N 383 N sing N 384 N sing Y 385 N doub Y 386 N sing Y 387 N sing N 388 N sing Y 389 N doub N 390 N sing Y 391 N doub N 392 N sing Y 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N doub N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing UK J.Mol.Biol. JMOBAK 0070 0022-2836 328 655 668 10.1016/S0022-2836(03)00344-9 12706723 Structural and Thermodynamic Basis for the Interaction of the Src SH2 domain with the Activated form of the PDGF beta-receptor 2003 10.2210/pdb1nzl/pdb pdb_00001nzl 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 200 1 graphite SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RU200 11842.352 Tyrosine-protein kinase transforming protein SRC 2.7.1.112 SH2 domain 2 man polymer 1140.029 Doubly phosphorylated peptide ligand (PQpYEpYIPI) 1 syn polymer 35.453 CHLORIDE ION 2 syn non-polymer 194.226 TETRAETHYLENE GLYCOL 1 syn non-polymer 18.015 water 163 nat water p60-SRC no no AEEWYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQ QLVAYYSKHADGLCHRLTNVCPT AEEWYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQ QLVAYYSKHADGLCHRLTNVCPT A,B polypeptide(L) no yes PQ(PTR)E(PTR)IPA PQYEYIPA C polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Alpharetrovirus Rous sarcoma virus Schmidt-Ruppin Escherichia Escherichia coli sample V-SRC 11889 Rous sarcoma virus (strain Schmidt-Ruppin) 511693 Escherichia coli BL21 BL21 plasmid pET3 1 1.97 37.00 VAPOR DIFFUSION, HANGING DROP 8.0 PEG 4000,magnesium chloride, hepes, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 296K 296 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_conn struct_site chem_comp_atom chem_comp_bond repository Initial release Version format compliance Version format compliance Data collection Data collection Database references Derived calculations Refinement description Data collection 1 0 2003-04-22 1 1 2008-04-29 1 2 2011-07-13 1 3 2014-04-30 1 4 2023-08-16 1 5 2023-11-15 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _chem_comp_atom.atom_id _chem_comp_bond.atom_id_2 HETEROGEN The C8 and O5 atoms of the het hroup PG4 were not modelled and are not present in the coordinates. RCSB Y RCSB 2003-02-18 REL REL CL CHLORIDE ION PG4 TETRAETHYLENE GLYCOL HOH water 1SPS PDB ENTRY 1sps PDB experimental model CL1 2000 3 CL CL 2000 A CL1 2001 3 CL CL 2001 A PG4 3000 4 PG4 PG4 3000 A HOH 1000 5 HOH HOH 1000 A HOH 1001 5 HOH HOH 1001 A HOH 1002 5 HOH HOH 1002 A HOH 1004 5 HOH HOH 1004 A HOH 1005 5 HOH HOH 1005 A HOH 1008 5 HOH HOH 1008 A HOH 1009 5 HOH HOH 1009 A HOH 1011 5 HOH HOH 1011 A HOH 1012 5 HOH HOH 1012 A HOH 1013 5 HOH HOH 1013 A HOH 1014 5 HOH HOH 1014 A HOH 1016 5 HOH HOH 1016 A HOH 1018 5 HOH HOH 1018 A HOH 1022 5 HOH HOH 1022 A HOH 1024 5 HOH HOH 1024 A HOH 1027 5 HOH HOH 1027 A HOH 1030 5 HOH HOH 1030 A HOH 1031 5 HOH HOH 1031 A HOH 1033 5 HOH HOH 1033 A HOH 1036 5 HOH HOH 1036 A HOH 1044 5 HOH HOH 1044 A HOH 1047 5 HOH HOH 1047 A HOH 1050 5 HOH HOH 1050 A HOH 1056 5 HOH HOH 1056 A HOH 1060 5 HOH HOH 1060 A HOH 1062 5 HOH HOH 1062 A HOH 1065 5 HOH HOH 1065 A HOH 1068 5 HOH HOH 1068 A HOH 1072 5 HOH HOH 1072 A HOH 1075 5 HOH HOH 1075 A HOH 1076 5 HOH HOH 1076 A HOH 1081 5 HOH HOH 1081 A HOH 1084 5 HOH HOH 1084 A HOH 1086 5 HOH HOH 1086 A HOH 1087 5 HOH HOH 1087 A HOH 1089 5 HOH HOH 1089 A HOH 1090 5 HOH HOH 1090 A HOH 1093 5 HOH HOH 1093 A HOH 1098 5 HOH HOH 1098 A HOH 1102 5 HOH HOH 1102 A HOH 1107 5 HOH HOH 1107 A HOH 1110 5 HOH HOH 1110 A HOH 1111 5 HOH HOH 1111 A HOH 1112 5 HOH HOH 1112 A HOH 1113 5 HOH HOH 1113 A HOH 1115 5 HOH HOH 1115 A HOH 1116 5 HOH HOH 1116 A HOH 1120 5 HOH HOH 1120 A HOH 1121 5 HOH HOH 1121 A HOH 1123 5 HOH HOH 1123 A HOH 1124 5 HOH HOH 1124 A HOH 1125 5 HOH HOH 1125 A HOH 1126 5 HOH HOH 1126 A HOH 1127 5 HOH HOH 1127 A HOH 1130 5 HOH HOH 1130 A HOH 1133 5 HOH HOH 1133 A HOH 1134 5 HOH HOH 1134 A HOH 1135 5 HOH HOH 1135 A HOH 1141 5 HOH HOH 1141 A HOH 1144 5 HOH HOH 1144 A HOH 1145 5 HOH HOH 1145 A HOH 1147 5 HOH HOH 1147 A HOH 1148 5 HOH HOH 1148 A HOH 1149 5 HOH HOH 1149 A HOH 1152 5 HOH HOH 1152 A HOH 1153 5 HOH HOH 1153 A HOH 1156 5 HOH HOH 1156 A HOH 1157 5 HOH HOH 1157 A HOH 1158 5 HOH HOH 1158 A HOH 1003 5 HOH HOH 1003 B HOH 1006 5 HOH HOH 1006 B HOH 1007 5 HOH HOH 1007 B HOH 1010 5 HOH HOH 1010 B HOH 1015 5 HOH HOH 1015 B HOH 1017 5 HOH HOH 1017 B HOH 1019 5 HOH HOH 1019 B HOH 1021 5 HOH HOH 1021 B HOH 1023 5 HOH HOH 1023 B HOH 1025 5 HOH HOH 1025 B HOH 1026 5 HOH HOH 1026 B HOH 1028 5 HOH HOH 1028 B HOH 1029 5 HOH HOH 1029 B HOH 1032 5 HOH HOH 1032 B HOH 1034 5 HOH HOH 1034 B HOH 1035 5 HOH HOH 1035 B HOH 1037 5 HOH HOH 1037 B HOH 1039 5 HOH HOH 1039 B HOH 1040 5 HOH HOH 1040 B HOH 1041 5 HOH HOH 1041 B HOH 1042 5 HOH HOH 1042 B HOH 1043 5 HOH HOH 1043 B HOH 1045 5 HOH HOH 1045 B HOH 1046 5 HOH HOH 1046 B HOH 1048 5 HOH HOH 1048 B HOH 1049 5 HOH HOH 1049 B HOH 1051 5 HOH HOH 1051 B HOH 1052 5 HOH HOH 1052 B HOH 1053 5 HOH HOH 1053 B HOH 1054 5 HOH HOH 1054 B HOH 1055 5 HOH HOH 1055 B HOH 1057 5 HOH HOH 1057 B HOH 1058 5 HOH HOH 1058 B HOH 1059 5 HOH HOH 1059 B HOH 1063 5 HOH HOH 1063 B HOH 1064 5 HOH HOH 1064 B HOH 1066 5 HOH HOH 1066 B HOH 1067 5 HOH HOH 1067 B HOH 1069 5 HOH HOH 1069 B HOH 1070 5 HOH HOH 1070 B HOH 1071 5 HOH HOH 1071 B HOH 1073 5 HOH HOH 1073 B HOH 1074 5 HOH HOH 1074 B HOH 1077 5 HOH HOH 1077 B HOH 1078 5 HOH HOH 1078 B HOH 1079 5 HOH HOH 1079 B HOH 1080 5 HOH HOH 1080 B HOH 1082 5 HOH HOH 1082 B HOH 1083 5 HOH HOH 1083 B HOH 1088 5 HOH HOH 1088 B HOH 1091 5 HOH HOH 1091 B HOH 1092 5 HOH HOH 1092 B HOH 1094 5 HOH HOH 1094 B HOH 1095 5 HOH HOH 1095 B HOH 1096 5 HOH HOH 1096 B HOH 1099 5 HOH HOH 1099 B HOH 1101 5 HOH HOH 1101 B HOH 1103 5 HOH HOH 1103 B HOH 1104 5 HOH HOH 1104 B HOH 1105 5 HOH HOH 1105 B HOH 1106 5 HOH HOH 1106 B HOH 1108 5 HOH HOH 1108 B HOH 1109 5 HOH HOH 1109 B HOH 1114 5 HOH HOH 1114 B HOH 1118 5 HOH HOH 1118 B HOH 1119 5 HOH HOH 1119 B HOH 1122 5 HOH HOH 1122 B HOH 1128 5 HOH HOH 1128 B HOH 1129 5 HOH HOH 1129 B HOH 1131 5 HOH HOH 1131 B HOH 1132 5 HOH HOH 1132 B HOH 1136 5 HOH HOH 1136 B HOH 1137 5 HOH HOH 1137 B HOH 1139 5 HOH HOH 1139 B HOH 1140 5 HOH HOH 1140 B HOH 1142 5 HOH HOH 1142 B HOH 1143 5 HOH HOH 1143 B HOH 1146 5 HOH HOH 1146 B HOH 1150 5 HOH HOH 1150 B HOH 1151 5 HOH HOH 1151 B HOH 1154 5 HOH HOH 1154 B HOH 1159 5 HOH HOH 1159 B HOH 1160 5 HOH HOH 1160 B HOH 1161 5 HOH HOH 1161 B HOH 1020 5 HOH HOH 1020 C HOH 1038 5 HOH HOH 1038 C HOH 1061 5 HOH HOH 1061 C HOH 1085 5 HOH HOH 1085 C HOH 1097 5 HOH HOH 1097 C HOH 1100 5 HOH HOH 1100 C HOH 1117 5 HOH HOH 1117 C HOH 1138 5 HOH HOH 1138 C HOH 1155 5 HOH HOH 1155 C HOH 1162 5 HOH HOH 1162 C ALA 147 n 1 ALA 147 A GLU 148 n 2 GLU 148 A GLU 149 n 3 GLU 149 A TRP 150 n 4 TRP 150 A TYR 151 n 5 TYR 151 A PHE 152 n 6 PHE 152 A GLY 153 n 7 GLY 153 A ALA 154 n 8 LYS 154 A ILE 155 n 9 ILE 155 A THR 156 n 10 THR 156 A ARG 157 n 11 ARG 157 A ARG 158 n 12 ARG 158 A GLU 159 n 13 GLU 159 A SER 160 n 14 SER 160 A GLU 161 n 15 GLU 161 A ARG 162 n 16 ARG 162 A LEU 163 n 17 LEU 163 A LEU 164 n 18 LEU 164 A LEU 165 n 19 LEU 165 A ASN 166 n 20 ASN 166 A PRO 167 n 21 PRO 167 A GLU 168 n 22 GLU 168 A ASN 169 n 23 ASN 169 A PRO 170 n 24 PRO 170 A ARG 171 n 25 ARG 171 A GLY 172 n 26 GLY 172 A THR 173 n 27 THR 173 A PHE 174 n 28 PHE 174 A LEU 175 n 29 LEU 175 A VAL 176 n 30 VAL 176 A ARG 177 n 31 ARG 177 A GLU 178 n 32 GLU 178 A SER 179 n 33 SER 179 A GLU 180 n 34 GLU 180 A THR 181 n 35 THR 181 A n 36 182 A n 37 183 A GLY 184 n 38 GLY 184 A ALA 185 n 39 ALA 185 A TYR 186 n 40 TYR 186 A CYS 187 n 41 CYS 187 A LEU 188 n 42 LEU 188 A SER 189 n 43 SER 189 A VAL 190 n 44 VAL 190 A SER 191 n 45 SER 191 A ASP 192 n 46 ASP 192 A PHE 193 n 47 PHE 193 A ASP 194 n 48 ASP 194 A ASN 195 n 49 ASN 195 A ALA 196 n 50 ALA 196 A LYS 197 n 51 LYS 197 A GLY 198 n 52 GLY 198 A LEU 199 n 53 LEU 199 A ASN 200 n 54 ASN 200 A VAL 201 n 55 VAL 201 A LYS 202 n 56 LYS 202 A HIS 203 n 57 HIS 203 A TYR 204 n 58 TYR 204 A LYS 205 n 59 LYS 205 A ILE 206 n 60 ILE 206 A ARG 207 n 61 ARG 207 A ALA 208 n 62 LYS 208 A LEU 209 n 63 LEU 209 A ALA 210 n 64 ASP 210 A SER 211 n 65 SER 211 A GLY 212 n 66 GLY 212 A GLY 213 n 67 GLY 213 A PHE 214 n 68 PHE 214 A TYR 215 n 69 TYR 215 A ILE 216 n 70 ILE 216 A THR 217 n 71 THR 217 A ALA 218 n 72 SER 218 A ALA 219 n 73 ARG 219 A THR 220 n 74 THR 220 A GLN 221 n 75 GLN 221 A PHE 222 n 76 PHE 222 A SER 223 n 77 SER 223 A SER 224 n 78 SER 224 A LEU 225 n 79 LEU 225 A GLN 226 n 80 GLN 226 A ALA 227 n 81 GLN 227 A LEU 228 n 82 LEU 228 A VAL 229 n 83 VAL 229 A ALA 230 n 84 ALA 230 A TYR 231 n 85 TYR 231 A TYR 232 n 86 TYR 232 A SER 233 n 87 SER 233 A LYS 234 n 88 LYS 234 A HIS 235 n 89 HIS 235 A ALA 236 n 90 ALA 236 A ASP 237 n 91 ASP 237 A GLY 238 n 92 GLY 238 A LEU 239 n 93 LEU 239 A CYS 240 n 94 CYS 240 A HIS 241 n 95 HIS 241 A ARG 242 n 96 ARG 242 A LEU 243 n 97 LEU 243 A THR 244 n 98 THR 244 A ASN 245 n 99 ASN 245 A VAL 246 n 100 VAL 246 A CYS 247 n 101 CYS 247 A PRO 248 n 102 PRO 248 A THR 249 n 103 THR 249 A ALA 251 n 1 ALA 251 B GLU 252 n 2 GLU 252 B ALA 253 n 3 GLU 253 B TRP 254 n 4 TRP 254 B TYR 255 n 5 TYR 255 B PHE 256 n 6 PHE 256 B GLY 257 n 7 GLY 257 B LYS 258 n 8 LYS 258 B ILE 259 n 9 ILE 259 B THR 260 n 10 THR 260 B ARG 261 n 11 ARG 261 B ALA 262 n 12 ARG 262 B ALA 263 n 13 GLU 263 B SER 264 n 14 SER 264 B GLU 265 n 15 GLU 265 B ARG 266 n 16 ARG 266 B LEU 267 n 17 LEU 267 B LEU 268 n 18 LEU 268 B LEU 269 n 19 LEU 269 B ASN 270 n 20 ASN 270 B PRO 271 n 21 PRO 271 B GLU 272 n 22 GLU 272 B ASN 273 n 23 ASN 273 B PRO 274 n 24 PRO 274 B ARG 275 n 25 ARG 275 B GLY 276 n 26 GLY 276 B THR 277 n 27 THR 277 B PHE 278 n 28 PHE 278 B LEU 279 n 29 LEU 279 B VAL 280 n 30 VAL 280 B ARG 281 n 31 ARG 281 B GLU 282 n 32 GLU 282 B SER 283 n 33 SER 283 B GLU 284 n 34 GLU 284 B THR 285 n 35 THR 285 B THR 286 n 36 THR 286 B ALA 287 n 37 LYS 287 B GLY 288 n 38 GLY 288 B ALA 289 n 39 ALA 289 B TYR 290 n 40 TYR 290 B CYS 291 n 41 CYS 291 B LEU 292 n 42 LEU 292 B SER 293 n 43 SER 293 B VAL 294 n 44 VAL 294 B SER 295 n 45 SER 295 B ASP 296 n 46 ASP 296 B PHE 297 n 47 PHE 297 B ASP 298 n 48 ASP 298 B ASN 299 n 49 ASN 299 B ALA 300 n 50 ALA 300 B LYS 301 n 51 LYS 301 B GLY 302 n 52 GLY 302 B LEU 303 n 53 LEU 303 B ASN 304 n 54 ASN 304 B VAL 305 n 55 VAL 305 B LYS 306 n 56 LYS 306 B HIS 307 n 57 HIS 307 B TYR 308 n 58 TYR 308 B LYS 309 n 59 LYS 309 B ILE 310 n 60 ILE 310 B ARG 311 n 61 ARG 311 B LYS 312 n 62 LYS 312 B LEU 313 n 63 LEU 313 B ALA 314 n 64 ASP 314 B SER 315 n 65 SER 315 B GLY 316 n 66 GLY 316 B GLY 317 n 67 GLY 317 B PHE 318 n 68 PHE 318 B TYR 319 n 69 TYR 319 B ILE 320 n 70 ILE 320 B THR 321 n 71 THR 321 B SER 322 n 72 SER 322 B ALA 323 n 73 ARG 323 B THR 324 n 74 THR 324 B GLN 325 n 75 GLN 325 B PHE 326 n 76 PHE 326 B SER 327 n 77 SER 327 B SER 328 n 78 SER 328 B LEU 329 n 79 LEU 329 B GLN 330 n 80 GLN 330 B ALA 331 n 81 GLN 331 B LEU 332 n 82 LEU 332 B VAL 333 n 83 VAL 333 B ALA 334 n 84 ALA 334 B TYR 335 n 85 TYR 335 B TYR 336 n 86 TYR 336 B SER 337 n 87 SER 337 B LYS 338 n 88 LYS 338 B HIS 339 n 89 HIS 339 B ALA 340 n 90 ALA 340 B ASP 341 n 91 ASP 341 B GLY 342 n 92 GLY 342 B LEU 343 n 93 LEU 343 B CYS 344 n 94 CYS 344 B HIS 345 n 95 HIS 345 B ARG 346 n 96 ARG 346 B LEU 347 n 97 LEU 347 B THR 348 n 98 THR 348 B ASN 349 n 99 ASN 349 B VAL 350 n 100 VAL 350 B CYS 351 n 101 CYS 351 B PRO 352 n 102 PRO 352 B THR 353 n 103 THR 353 B PRO 498 n 1 PRO 498 C GLN 499 n 2 GLN 499 C PTR 500 n 3 PTR 500 C GLU 501 n 4 GLU 501 C PTR 502 n 5 PTR 502 C ILE 503 n 6 ILE 503 C PRO 504 n 7 PRO 504 C ALA 505 n 8 ALA 505 C author_and_software_defined_assembly PISA 1 monomeric author_and_software_defined_assembly PISA 2 dimeric 1020 -10 6220 C PTR 500 O-PHOSPHOTYROSINE C PTR 3 TYR C PTR 502 O-PHOSPHOTYROSINE C PTR 5 TYR 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O TYR 215 A O TYR 69 A N ARG 207 A N ARG 61 A O ILE 206 A O ILE 60 A N TYR 186 A N TYR 40 A O CYS 187 A O CYS 41 A N ARG 177 A N ARG 31 A N PHE 174 A N PHE 28 A O ASN 245 A O ASN 99 B O PHE 326 B O PHE 76 B N PHE 318 B N PHE 68 B O TYR 319 B O TYR 69 B N ARG 311 B N ARG 61 B O ILE 310 B O ILE 60 B N TYR 290 B N TYR 40 B O CYS 291 B O CYS 41 B N ARG 281 B N ARG 31 B N PHE 278 B N PHE 28 B O ASN 349 B O ASN 99 1 A CG LYS 154 A CG LYS 8 1 Y 1 A CD LYS 154 A CD LYS 8 1 Y 1 A CE LYS 154 A CE LYS 8 1 Y 1 A NZ LYS 154 A NZ LYS 8 1 Y 1 A CG LYS 208 A CG LYS 62 1 Y 1 A CD LYS 208 A CD LYS 62 1 Y 1 A CE LYS 208 A CE LYS 62 1 Y 1 A NZ LYS 208 A NZ LYS 62 1 Y 1 A CG ASP 210 A CG ASP 64 1 Y 1 A OD1 ASP 210 A OD1 ASP 64 1 Y 1 A OD2 ASP 210 A OD2 ASP 64 1 Y 1 A OG SER 218 A OG SER 72 1 Y 1 A CG ARG 219 A CG ARG 73 1 Y 1 A CD ARG 219 A CD ARG 73 1 Y 1 A NE ARG 219 A NE ARG 73 1 Y 1 A CZ ARG 219 A CZ ARG 73 1 Y 1 A NH1 ARG 219 A NH1 ARG 73 1 Y 1 A NH2 ARG 219 A NH2 ARG 73 1 Y 1 A CG GLN 227 A CG GLN 81 1 Y 1 A CD GLN 227 A CD GLN 81 1 Y 1 A OE1 GLN 227 A OE1 GLN 81 1 Y 1 A NE2 GLN 227 A NE2 GLN 81 1 Y 1 B CG GLU 253 B CG GLU 3 1 Y 1 B CD GLU 253 B CD GLU 3 1 Y 1 B OE1 GLU 253 B OE1 GLU 3 1 Y 1 B OE2 GLU 253 B OE2 GLU 3 1 Y 1 B CG ARG 262 B CG ARG 12 1 Y 1 B CD ARG 262 B CD ARG 12 1 Y 1 B NE ARG 262 B NE ARG 12 1 Y 1 B CZ ARG 262 B CZ ARG 12 1 Y 1 B NH1 ARG 262 B NH1 ARG 12 1 Y 1 B NH2 ARG 262 B NH2 ARG 12 1 Y 1 B CG GLU 263 B CG GLU 13 1 Y 1 B CD GLU 263 B CD GLU 13 1 Y 1 B OE1 GLU 263 B OE1 GLU 13 1 Y 1 B OE2 GLU 263 B OE2 GLU 13 1 Y 1 B CG LYS 287 B CG LYS 37 1 Y 1 B CD LYS 287 B CD LYS 37 1 Y 1 B CE LYS 287 B CE LYS 37 1 Y 1 B NZ LYS 287 B NZ LYS 37 1 Y 1 B CG ASP 314 B CG ASP 64 1 Y 1 B OD1 ASP 314 B OD1 ASP 64 1 Y 1 B OD2 ASP 314 B OD2 ASP 64 1 Y 1 B CG ARG 323 B CG ARG 73 1 Y 1 B CD ARG 323 B CD ARG 73 1 Y 1 B NE ARG 323 B NE ARG 73 1 Y 1 B CZ ARG 323 B CZ ARG 73 1 Y 1 B NH1 ARG 323 B NH1 ARG 73 1 Y 1 B NH2 ARG 323 B NH2 ARG 73 1 Y 1 B CG GLN 331 B CG GLN 81 1 Y 1 B CD GLN 331 B CD GLN 81 1 Y 1 B OE1 GLN 331 B OE1 GLN 81 1 Y 1 B NE2 GLN 331 B NE2 GLN 81 1 Y 1 A C8 PG4 3000 F C8 PG4 1 1 N 1 A O5 PG4 3000 F O5 PG4 1 1 N 1 A THR 182 A THR 36 1 Y 1 A LYS 183 A LYS 37 1 Y 1 A SER 218 -101.70 52.57 1 A ARG 219 -173.10 5.66 1 A ASP 237 36.47 57.55 PROTEIN_REP_PTYR_PTR3.PARAM PROTEIN_PTYR_PTR.TOP WATER_REP.PARAM ION.TOP ION.PARAM WATER.TOP PEG.PARAM PEG_MOD1.TOP 20.1 -3.86 0.00 0.00 1.44 0.00 2.42 0.265 0.007 0.223 0.223 1.90 28.27 1641 16865 16355 10.0 97.0 RANDOM 1 RESTRAINED THROUGHOUT 1 MOLECULAR REPLACEMENT PDB ENTRY 1sps Engh & Huber FLAT MODEL 47.7867 0.376681 0.29 0.24 5 0.15 0.09 1.90 28.27 163 1853 13 0 1677 0.006 1.4 23.8 0.82 1.44 1.50 2.29 2.00 2.02 2.00 2.86 2.50 0.263 0.017 0.223 2.02 239 2333 6 9.3 92.8 10.9 1.9 30.0 1NZL 17153 1 2 0.069 1 97.4 refinement CNS 1.0 data reduction DENZO data scaling SCALEPACK phasing CNS Crystal Structure of Src SH2 domain bound to doubly phosphorylated peptide PQpYEpYIPI 1 N N 1 N N 2 N N 3 N N 3 N N 4 N N 5 N N 5 N N 5 N N A THR 156 A THR 10 HELX_P A LEU 165 A LEU 19 1 1 10 A SER 224 A SER 78 HELX_P A SER 233 A SER 87 1 2 10 B THR 260 B THR 10 HELX_P B LEU 269 B LEU 19 1 3 10 B SER 328 B SER 78 HELX_P B HIS 339 B HIS 89 1 4 12 covale 1.331 both C GLN 499 C C GLN 2 1_555 C PTR 500 C N PTR 3 1_555 covale 1.329 both C PTR 500 C C PTR 3 1_555 C GLU 501 C N GLU 4 1_555 covale 1.326 both C GLU 501 C C GLU 4 1_555 C PTR 502 C N PTR 5 1_555 covale 1.329 both C PTR 502 C C PTR 5 1_555 C ILE 503 C N ILE 6 1_555 TRANSFERASE SH2 domain, phosphotyrosine, TRANSFERASE SRC_RSVSA UNP 1 145 P00524 AEEWYFGKITRRESERLLLNPENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFSSLQ QLVAYYSKHADGLCHRLTNVCPT 1NZL PDB 2 1NZL 145 247 1NZL 147 249 P00524 A 1 1 103 145 247 1NZL 251 353 P00524 B 1 1 103 498 505 1NZL 498 505 1NZL C 2 1 8 5 6 anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel A GLY 213 A GLY 67 A TYR 215 A TYR 69 A GLY 198 A GLY 52 A LEU 209 A LEU 63 A TYR 186 A TYR 40 A ASP 194 A ASP 48 A THR 173 A THR 27 A GLU 178 A GLU 32 A ASN 245 A ASN 99 A VAL 246 A VAL 100 B THR 324 B THR 74 B PHE 326 B PHE 76 B PHE 318 B PHE 68 B THR 321 B THR 71 B GLY 302 B GLY 52 B LYS 312 B LYS 62 B TYR 290 B TYR 40 B ASP 298 B ASP 48 B THR 277 B THR 27 B GLU 282 B GLU 32 B ASN 349 B ASN 99 B VAL 350 B VAL 100 BINDING SITE FOR RESIDUE CL A 2000 A CL 2000 Software 2 BINDING SITE FOR RESIDUE PG4 A 3000 A PG4 3000 Software 2 A THR 181 A THR 35 2 1_555 A CYS 187 A CYS 41 2 1_555 A PHE 152 A PHE 6 2 1_555 B GLU 252 B GLU 2 2 4_457 18 P 21 21 2