0.015980 0.000000 0.000000 0.000000 0.015980 0.000000 0.000000 0.000000 0.006843 0.00000 0.00000 0.00000 Joint Center for Structural Genomics (JCSG) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 62.580 62.580 146.130 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 R C N 309 N O N 310 N C N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N N Y 330 N C Y 331 N C Y 332 N C Y 333 N C Y 334 N C N 335 N O N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C Y 353 N C Y 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C N 359 N O N 360 N O N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N N N 373 S C N 374 N C N 375 N O N 376 N C N 377 N C N 378 N C N 379 N O N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub Y 322 N sing Y 323 N sing N 324 N sing Y 325 N sing Y 326 N doub N 327 N sing Y 328 N doub N 329 N sing Y 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing Y 345 N doub Y 346 N sing Y 347 N sing N 348 N sing Y 349 N doub N 350 N sing Y 351 N doub N 352 N sing Y 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing US Proteins PSFGEY 0867 0887-3585 56 396 400 10.1002/prot.20084 15211524 Crystal structure of a methionine aminopeptidase (TM1478) from Thermotoga maritima at 1.9 A resolution. 2004 10.2210/pdb1o0x/pdb pdb_00001o0x 100.0 1 CCD 2001-05-29 ADSC QUANTUM 4 ASYMMETRICALLY CUT SI CRYSTAL, CYLINDRICALLY BENT SINGLE WAVELENGTH M x-ray 1 1.000 1.0 5.0.3 ALS 1.000 SYNCHROTRON ALS BEAMLINE 5.0.3 28991.502 Methionine aminopeptidase 3.4.11.18 1 man polymer 18.015 water 195 nat water no no MGSDKIHHHHHHMIRIKTPSEIEKMKKAGKAVAVALREVRKVIVPGKTAWDVETLVLEIFKKLRVKPAFKGYGGYKYATC VSVNEEVVHGLPLKEKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKELVRVTREVLEKAIKMIKPGIRLGDVS HCIQETVESVGFNVIRDYVGHGVGRELHEDPQIPNYGTPGTGVVLRKGMTLAIEPMVSEGDWRVVVKEDGWTAVTVDGSR CAHFEHTILITENGAEILTKEG MGSDKIHHHHHHMIRIKTPSEIEKMKKAGKAVAVALREVRKVIVPGKTAWDVETLVLEIFKKLRVKPAFKGYGGYKYATC VSVNEEVVHGLPLKEKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKELVRVTREVLEKAIKMIKPGIRLGDVS HCIQETVESVGFNVIRDYVGHGVGRELHEDPQIPNYGTPGTGVVLRKGMTLAIEPMVSEGDWRVVVKEDGWTAVTVDGSR CAHFEHTILITENGAEILTKEG A 283335 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Thermotoga Escherichia sample TM1478 2336 Thermotoga maritima 562 Escherichia coli 1 2.47 50.14 5.60 19% iso-propanol, 19% P4K, 0.095 M Na-citrate pH 5.6, 5% glycerol, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 293K, pH 5.60 293 Joint Center for Structural Genomics JCSG PSI, Protein Structure Initiative software pdbx_database_related database_2 struct_ref_seq_dif chem_comp_atom chem_comp_bond pdbx_initial_refinement_model repository Initial release Version format compliance Version format compliance Refinement description Data collection Database references Database references Data collection Refinement description 1 0 2002-11-06 1 1 2008-04-26 1 2 2011-07-13 1 3 2017-10-04 1 4 2018-07-18 1 5 2023-01-25 1 6 2023-09-20 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details Y RCSB Y RCSB 2002-09-13 REL REL HOH water 1MAT PDB experimental model WAT 1 2 HOH HOH 256 A WAT 2 2 HOH HOH 257 A WAT 3 2 HOH HOH 258 A WAT 4 2 HOH HOH 259 A WAT 5 2 HOH HOH 260 A WAT 6 2 HOH HOH 261 A WAT 7 2 HOH HOH 262 A WAT 8 2 HOH HOH 263 A WAT 9 2 HOH HOH 264 A WAT 10 2 HOH HOH 265 A WAT 11 2 HOH HOH 266 A WAT 12 2 HOH HOH 267 A WAT 13 2 HOH HOH 268 A WAT 14 2 HOH HOH 269 A WAT 15 2 HOH HOH 270 A WAT 16 2 HOH HOH 271 A WAT 17 2 HOH HOH 272 A WAT 18 2 HOH HOH 273 A WAT 19 2 HOH HOH 274 A WAT 20 2 HOH HOH 275 A WAT 21 2 HOH HOH 276 A WAT 22 2 HOH HOH 277 A WAT 23 2 HOH HOH 278 A WAT 24 2 HOH HOH 279 A WAT 25 2 HOH HOH 280 A WAT 26 2 HOH HOH 281 A WAT 27 2 HOH HOH 282 A WAT 28 2 HOH HOH 283 A WAT 29 2 HOH HOH 284 A WAT 30 2 HOH HOH 285 A WAT 31 2 HOH HOH 286 A WAT 32 2 HOH HOH 287 A WAT 33 2 HOH HOH 288 A WAT 34 2 HOH HOH 289 A WAT 35 2 HOH HOH 290 A WAT 36 2 HOH HOH 291 A WAT 37 2 HOH HOH 292 A WAT 38 2 HOH HOH 293 A WAT 39 2 HOH HOH 294 A WAT 40 2 HOH HOH 295 A WAT 41 2 HOH HOH 296 A WAT 42 2 HOH HOH 297 A WAT 43 2 HOH HOH 298 A WAT 44 2 HOH HOH 299 A WAT 45 2 HOH HOH 300 A WAT 46 2 HOH HOH 301 A WAT 47 2 HOH HOH 302 A WAT 48 2 HOH HOH 303 A WAT 49 2 HOH HOH 304 A WAT 50 2 HOH HOH 305 A WAT 51 2 HOH HOH 306 A WAT 52 2 HOH HOH 307 A WAT 53 2 HOH HOH 308 A WAT 54 2 HOH HOH 309 A WAT 55 2 HOH HOH 310 A WAT 56 2 HOH HOH 311 A WAT 57 2 HOH HOH 312 A WAT 58 2 HOH HOH 313 A WAT 59 2 HOH HOH 314 A WAT 60 2 HOH HOH 315 A WAT 61 2 HOH HOH 316 A WAT 62 2 HOH HOH 317 A WAT 63 2 HOH HOH 318 A WAT 64 2 HOH HOH 319 A WAT 65 2 HOH HOH 320 A WAT 66 2 HOH HOH 321 A WAT 67 2 HOH HOH 322 A WAT 68 2 HOH HOH 323 A WAT 69 2 HOH HOH 324 A WAT 70 2 HOH HOH 325 A WAT 71 2 HOH HOH 326 A WAT 72 2 HOH HOH 327 A WAT 73 2 HOH HOH 328 A WAT 74 2 HOH HOH 329 A WAT 75 2 HOH HOH 330 A WAT 76 2 HOH HOH 331 A WAT 77 2 HOH HOH 332 A WAT 78 2 HOH HOH 333 A WAT 79 2 HOH HOH 334 A WAT 80 2 HOH HOH 335 A WAT 81 2 HOH HOH 336 A WAT 82 2 HOH HOH 337 A WAT 83 2 HOH HOH 338 A WAT 84 2 HOH HOH 339 A WAT 85 2 HOH HOH 340 A WAT 86 2 HOH HOH 341 A WAT 87 2 HOH HOH 342 A WAT 88 2 HOH HOH 343 A WAT 89 2 HOH HOH 344 A WAT 90 2 HOH HOH 345 A WAT 91 2 HOH HOH 346 A WAT 92 2 HOH HOH 347 A WAT 93 2 HOH HOH 348 A WAT 94 2 HOH HOH 349 A WAT 95 2 HOH HOH 350 A WAT 96 2 HOH HOH 351 A WAT 97 2 HOH HOH 352 A WAT 98 2 HOH HOH 353 A WAT 99 2 HOH HOH 354 A WAT 100 2 HOH HOH 355 A WAT 101 2 HOH HOH 356 A WAT 102 2 HOH HOH 357 A WAT 103 2 HOH HOH 358 A WAT 104 2 HOH HOH 359 A WAT 105 2 HOH HOH 360 A WAT 106 2 HOH HOH 361 A WAT 107 2 HOH HOH 362 A WAT 108 2 HOH HOH 363 A WAT 109 2 HOH HOH 364 A WAT 110 2 HOH HOH 365 A WAT 111 2 HOH HOH 366 A WAT 112 2 HOH HOH 367 A WAT 113 2 HOH HOH 368 A WAT 114 2 HOH HOH 369 A WAT 115 2 HOH HOH 370 A WAT 116 2 HOH HOH 371 A WAT 117 2 HOH HOH 372 A WAT 118 2 HOH HOH 373 A WAT 119 2 HOH HOH 374 A WAT 120 2 HOH HOH 375 A WAT 121 2 HOH HOH 376 A WAT 122 2 HOH HOH 377 A WAT 123 2 HOH HOH 378 A WAT 124 2 HOH HOH 379 A WAT 125 2 HOH HOH 380 A WAT 126 2 HOH HOH 381 A WAT 127 2 HOH HOH 382 A WAT 128 2 HOH HOH 383 A WAT 129 2 HOH HOH 384 A WAT 130 2 HOH HOH 385 A WAT 131 2 HOH HOH 386 A WAT 132 2 HOH HOH 387 A WAT 133 2 HOH HOH 388 A WAT 134 2 HOH HOH 389 A WAT 135 2 HOH HOH 390 A WAT 136 2 HOH HOH 391 A WAT 137 2 HOH HOH 392 A WAT 138 2 HOH HOH 393 A WAT 139 2 HOH HOH 394 A WAT 140 2 HOH HOH 395 A WAT 141 2 HOH HOH 396 A WAT 142 2 HOH HOH 397 A WAT 143 2 HOH HOH 398 A WAT 144 2 HOH HOH 399 A WAT 145 2 HOH HOH 400 A WAT 146 2 HOH HOH 401 A WAT 147 2 HOH HOH 402 A WAT 148 2 HOH HOH 403 A WAT 149 2 HOH HOH 404 A WAT 150 2 HOH HOH 405 A WAT 151 2 HOH HOH 406 A WAT 152 2 HOH HOH 407 A WAT 153 2 HOH HOH 408 A WAT 154 2 HOH HOH 409 A WAT 155 2 HOH HOH 410 A WAT 156 2 HOH HOH 411 A WAT 157 2 HOH HOH 412 A WAT 158 2 HOH HOH 413 A WAT 159 2 HOH HOH 414 A WAT 160 2 HOH HOH 415 A WAT 161 2 HOH HOH 416 A WAT 162 2 HOH HOH 417 A WAT 163 2 HOH HOH 418 A WAT 164 2 HOH HOH 419 A WAT 165 2 HOH HOH 420 A WAT 166 2 HOH HOH 421 A WAT 167 2 HOH HOH 422 A WAT 168 2 HOH HOH 423 A WAT 169 2 HOH HOH 424 A WAT 170 2 HOH HOH 425 A WAT 171 2 HOH HOH 426 A WAT 172 2 HOH HOH 427 A WAT 173 2 HOH HOH 428 A WAT 174 2 HOH HOH 429 A WAT 175 2 HOH HOH 430 A WAT 176 2 HOH HOH 431 A WAT 177 2 HOH HOH 432 A WAT 178 2 HOH HOH 433 A WAT 179 2 HOH HOH 434 A WAT 180 2 HOH HOH 435 A WAT 181 2 HOH HOH 436 A WAT 182 2 HOH HOH 437 A WAT 183 2 HOH HOH 438 A WAT 184 2 HOH HOH 439 A WAT 185 2 HOH HOH 440 A WAT 186 2 HOH HOH 441 A WAT 187 2 HOH HOH 442 A WAT 188 2 HOH HOH 443 A WAT 189 2 HOH HOH 444 A WAT 190 2 HOH HOH 445 A WAT 191 2 HOH HOH 446 A WAT 192 2 HOH HOH 447 A WAT 193 2 HOH HOH 448 A WAT 194 2 HOH HOH 449 A WAT 195 2 HOH HOH 450 A n 1 -6 A n 2 -5 A n 3 -4 A n 4 -3 A n 5 -2 A n 6 -1 A n 7 0 A n 8 1 A n 9 2 A n 10 3 A n 11 4 A n 12 5 A MET 6 n 13 MET 6 A ILE 7 n 14 ILE 7 A ARG 8 n 15 ARG 8 A ILE 9 n 16 ILE 9 A LYS 10 n 17 LYS 10 A THR 11 n 18 THR 11 A PRO 12 n 19 PRO 12 A SER 13 n 20 SER 13 A GLU 14 n 21 GLU 14 A ILE 15 n 22 ILE 15 A GLU 16 n 23 GLU 16 A LYS 17 n 24 LYS 17 A MET 18 n 25 MET 18 A LYS 19 n 26 LYS 19 A LYS 20 n 27 LYS 20 A ALA 21 n 28 ALA 21 A GLY 22 n 29 GLY 22 A LYS 23 n 30 LYS 23 A ALA 24 n 31 ALA 24 A VAL 25 n 32 VAL 25 A ALA 26 n 33 ALA 26 A VAL 27 n 34 VAL 27 A ALA 28 n 35 ALA 28 A LEU 29 n 36 LEU 29 A ARG 30 n 37 ARG 30 A GLU 31 n 38 GLU 31 A VAL 32 n 39 VAL 32 A ARG 33 n 40 ARG 33 A LYS 34 n 41 LYS 34 A VAL 35 n 42 VAL 35 A ILE 36 n 43 ILE 36 A VAL 37 n 44 VAL 37 A PRO 38 n 45 PRO 38 A GLY 39 n 46 GLY 39 A LYS 40 n 47 LYS 40 A THR 41 n 48 THR 41 A ALA 42 n 49 ALA 42 A TRP 43 n 50 TRP 43 A ASP 44 n 51 ASP 44 A VAL 45 n 52 VAL 45 A GLU 46 n 53 GLU 46 A THR 47 n 54 THR 47 A LEU 48 n 55 LEU 48 A VAL 49 n 56 VAL 49 A LEU 50 n 57 LEU 50 A GLU 51 n 58 GLU 51 A ILE 52 n 59 ILE 52 A PHE 53 n 60 PHE 53 A LYS 54 n 61 LYS 54 A LYS 55 n 62 LYS 55 A LEU 56 n 63 LEU 56 A ARG 57 n 64 ARG 57 A VAL 58 n 65 VAL 58 A LYS 59 n 66 LYS 59 A PRO 60 n 67 PRO 60 A ALA 61 n 68 ALA 61 A PHE 62 n 69 PHE 62 A LYS 63 n 70 LYS 63 A GLY 64 n 71 GLY 64 A TYR 65 n 72 TYR 65 A GLY 66 n 73 GLY 66 A GLY 67 n 74 GLY 67 A TYR 68 n 75 TYR 68 A LYS 69 n 76 LYS 69 A TYR 70 n 77 TYR 70 A ALA 71 n 78 ALA 71 A THR 72 n 79 THR 72 A CYS 73 n 80 CYS 73 A VAL 74 n 81 VAL 74 A SER 75 n 82 SER 75 A VAL 76 n 83 VAL 76 A ASN 77 n 84 ASN 77 A GLU 78 n 85 GLU 78 A GLU 79 n 86 GLU 79 A VAL 80 n 87 VAL 80 A VAL 81 n 88 VAL 81 A HIS 82 n 89 HIS 82 A GLY 83 n 90 GLY 83 A LEU 84 n 91 LEU 84 A PRO 85 n 92 PRO 85 A LEU 86 n 93 LEU 86 A LYS 87 n 94 LYS 87 A GLU 88 n 95 GLU 88 A LYS 89 n 96 LYS 89 A VAL 90 n 97 VAL 90 A PHE 91 n 98 PHE 91 A LYS 92 n 99 LYS 92 A GLU 93 n 100 GLU 93 A GLY 94 n 101 GLY 94 A ASP 95 n 102 ASP 95 A ILE 96 n 103 ILE 96 A VAL 97 n 104 VAL 97 A SER 98 n 105 SER 98 A VAL 99 n 106 VAL 99 A ASP 100 n 107 ASP 100 A VAL 101 n 108 VAL 101 A GLY 102 n 109 GLY 102 A ALA 103 n 110 ALA 103 A VAL 104 n 111 VAL 104 A TYR 105 n 112 TYR 105 A GLN 106 n 113 GLN 106 A GLY 107 n 114 GLY 107 A LEU 108 n 115 LEU 108 A TYR 109 n 116 TYR 109 A GLY 110 n 117 GLY 110 A ASP 111 n 118 ASP 111 A ALA 112 n 119 ALA 112 A ALA 113 n 120 ALA 113 A VAL 114 n 121 VAL 114 A THR 115 n 122 THR 115 A TYR 116 n 123 TYR 116 A ILE 117 n 124 ILE 117 A VAL 118 n 125 VAL 118 A GLY 119 n 126 GLY 119 A GLU 120 n 127 GLU 120 A THR 121 n 128 THR 121 A ASP 122 n 129 ASP 122 A GLU 123 n 130 GLU 123 A ARG 124 n 131 ARG 124 A GLY 125 n 132 GLY 125 A LYS 126 n 133 LYS 126 A GLU 127 n 134 GLU 127 A LEU 128 n 135 LEU 128 A VAL 129 n 136 VAL 129 A ARG 130 n 137 ARG 130 A VAL 131 n 138 VAL 131 A THR 132 n 139 THR 132 A ARG 133 n 140 ARG 133 A GLU 134 n 141 GLU 134 A VAL 135 n 142 VAL 135 A LEU 136 n 143 LEU 136 A GLU 137 n 144 GLU 137 A LYS 138 n 145 LYS 138 A ALA 139 n 146 ALA 139 A ILE 140 n 147 ILE 140 A LYS 141 n 148 LYS 141 A MET 142 n 149 MET 142 A ILE 143 n 150 ILE 143 A LYS 144 n 151 LYS 144 A PRO 145 n 152 PRO 145 A GLY 146 n 153 GLY 146 A ILE 147 n 154 ILE 147 A ARG 148 n 155 ARG 148 A LEU 149 n 156 LEU 149 A GLY 150 n 157 GLY 150 A ASP 151 n 158 ASP 151 A VAL 152 n 159 VAL 152 A SER 153 n 160 SER 153 A HIS 154 n 161 HIS 154 A CYS 155 n 162 CYS 155 A ILE 156 n 163 ILE 156 A GLN 157 n 164 GLN 157 A GLU 158 n 165 GLU 158 A THR 159 n 166 THR 159 A VAL 160 n 167 VAL 160 A GLU 161 n 168 GLU 161 A SER 162 n 169 SER 162 A VAL 163 n 170 VAL 163 A GLY 164 n 171 GLY 164 A PHE 165 n 172 PHE 165 A ASN 166 n 173 ASN 166 A VAL 167 n 174 VAL 167 A ILE 168 n 175 ILE 168 A ARG 169 n 176 ARG 169 A ASP 170 n 177 ASP 170 A TYR 171 n 178 TYR 171 A VAL 172 n 179 VAL 172 A GLY 173 n 180 GLY 173 A HIS 174 n 181 HIS 174 A GLY 175 n 182 GLY 175 A VAL 176 n 183 VAL 176 A GLY 177 n 184 GLY 177 A ARG 178 n 185 ARG 178 A GLU 179 n 186 GLU 179 A LEU 180 n 187 LEU 180 A HIS 181 n 188 HIS 181 A GLU 182 n 189 GLU 182 A ASP 183 n 190 ASP 183 A PRO 184 n 191 PRO 184 A GLN 185 n 192 GLN 185 A ILE 186 n 193 ILE 186 A PRO 187 n 194 PRO 187 A ASN 188 n 195 ASN 188 A TYR 189 n 196 TYR 189 A GLY 190 n 197 GLY 190 A THR 191 n 198 THR 191 A PRO 192 n 199 PRO 192 A GLY 193 n 200 GLY 193 A THR 194 n 201 THR 194 A GLY 195 n 202 GLY 195 A VAL 196 n 203 VAL 196 A VAL 197 n 204 VAL 197 A LEU 198 n 205 LEU 198 A ARG 199 n 206 ARG 199 A LYS 200 n 207 LYS 200 A GLY 201 n 208 GLY 201 A MET 202 n 209 MET 202 A THR 203 n 210 THR 203 A LEU 204 n 211 LEU 204 A ALA 205 n 212 ALA 205 A ILE 206 n 213 ILE 206 A GLU 207 n 214 GLU 207 A PRO 208 n 215 PRO 208 A MET 209 n 216 MET 209 A VAL 210 n 217 VAL 210 A SER 211 n 218 SER 211 A GLU 212 n 219 GLU 212 A GLY 213 n 220 GLY 213 A ASP 214 n 221 ASP 214 A TRP 215 n 222 TRP 215 A ARG 216 n 223 ARG 216 A VAL 217 n 224 VAL 217 A VAL 218 n 225 VAL 218 A VAL 219 n 226 VAL 219 A LYS 220 n 227 LYS 220 A GLU 221 n 228 GLU 221 A ASP 222 n 229 ASP 222 A GLY 223 n 230 GLY 223 A TRP 224 n 231 TRP 224 A THR 225 n 232 THR 225 A ALA 226 n 233 ALA 226 A VAL 227 n 234 VAL 227 A THR 228 n 235 THR 228 A VAL 229 n 236 VAL 229 A ASP 230 n 237 ASP 230 A GLY 231 n 238 GLY 231 A SER 232 n 239 SER 232 A ARG 233 n 240 ARG 233 A CYS 234 n 241 CYS 234 A ALA 235 n 242 ALA 235 A HIS 236 n 243 HIS 236 A PHE 237 n 244 PHE 237 A GLU 238 n 245 GLU 238 A HIS 239 n 246 HIS 239 A THR 240 n 247 THR 240 A ILE 241 n 248 ILE 241 A LEU 242 n 249 LEU 242 A ILE 243 n 250 ILE 243 A THR 244 n 251 THR 244 A GLU 245 n 252 GLU 245 A ASN 246 n 253 ASN 246 A GLY 247 n 254 GLY 247 A ALA 248 n 255 ALA 248 A GLU 249 n 256 GLU 249 A ILE 250 n 257 ILE 250 A LEU 251 n 258 LEU 251 A THR 252 n 259 THR 252 A LYS 253 n 260 LYS 253 A GLU 254 n 261 GLU 254 A n 262 255 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O TYR 116 A O TYR 123 A N VAL 97 A N VAL 104 A O VAL 104 A O VAL 111 A N LYS 59 A N LYS 66 A O TYR 116 A O TYR 123 A N VAL 97 A N VAL 104 A O SER 98 A O SER 105 A N SER 75 A N SER 82 A N ASN 166 A N ASN 173 A O SER 211 A O SER 218 A N VAL 210 A N VAL 217 A O ALA 235 A O ALA 242 A O ILE 186 A O ILE 193 A N GLY 173 A N GLY 180 A N HIS 174 A N HIS 181 A O ALA 205 A O ALA 212 A N LEU 204 A N LEU 211 A O ILE 241 A O ILE 248 A N LEU 242 A N LEU 249 A O GLU 249 A O GLU 256 A N VAL 218 A N VAL 225 A O VAL 227 A O VAL 234 1 A MET -6 A MET 1 1 Y 1 A GLY -5 A GLY 2 1 Y 1 A SER -4 A SER 3 1 Y 1 A ASP -3 A ASP 4 1 Y 1 A LYS -2 A LYS 5 1 Y 1 A ILE -1 A ILE 6 1 Y 1 A HIS 0 A HIS 7 1 Y 1 A HIS 1 A HIS 8 1 Y 1 A HIS 2 A HIS 9 1 Y 1 A HIS 3 A HIS 10 1 Y 1 A HIS 4 A HIS 11 1 Y 1 A HIS 5 A HIS 12 1 Y 1 A GLY 255 A GLY 262 1 Y 1 A A OD1 O ASP HOH 100 334 1.98 1 A A O O HOH HOH 284 289 2.11 1 A A OD1 O ASP HOH 111 334 2.15 1 -12.17 2.00 110.40 98.23 A A A CB CA C HIS HIS HIS 174 174 174 B N 1 -7.52 0.90 118.30 110.78 A A A CB CG OD1 ASP ASP ASP 230 230 230 N 1 A A CB SG CYS CYS 234 234 -0.136 0.016 1.812 1.676 N 1 A ASN 77 50.09 -110.20 1 A TRP 224 -134.73 -46.75 44.20 -1.27800 0.00000 0.00000 -4.28800 0.00000 5.56600 ASN 77 IS IN DISALLOWED REGION OF RAMACHANDRAN. THIS IS NOT PART OF THE ACTIVE SITE BUT IS A CONSERVED FEATURE OF ALL METHIONINE AMINO PEPTIDASES. A DIMETAL BINDING SITE LOCATED AT THE ACTIVE SITE OF THE MOLECULE DOES NOT HAVE ANY METALS BOUND. HIS 174 HAS A CLEARLY DEFINED DOUBLE CONFORMATION. 0.254 0.203 0.203 1.90 47.53 1098 21420 4.6 90.3 RANDOM 1 ANISOTROPIC FREE R 0.00 MOLECULAR REPLACEMENT WITH PROGRAM AMORE 1MAT STANDARD CNS DICTIONARY/ENGH AND HUBER BULK SOLVENT CORRECTION 0.40 76.77 0.33 0.24 5.00 0.28 0.22 1.90 47.53 195 2129 0 0 1934 0.018 1.99 3.355 1.500 3.998 2.000 5.377 2.000 7.194 2.500 0.5043 0.4106 1.93 53 855 21 5.8 53.00 1.900 50.000 1O0X 21470 0.07 1 16.5300 90.6 1.90 1.97 2.950 90.0 data collection Blu-Ice data reduction MOSFLM data reduction CCP4 data scaling SCALEPACK phasing SnB phasing MLPHARE model building CCP4 phasing SOLVE refinement CNS 1.0 data scaling CCP4 (SCALA) phasing CCP4 Crystal structure of Methionine aminopeptidase (TM1478) from Thermotoga maritima at 1.90 A resolution 1 N N 2 N N A THR 11 A THR 18 HELX_P A VAL 32 A VAL 39 1 1 22 A ARG 33 A ARG 40 HELX_P A ILE 36 A ILE 43 5 2 4 A THR 41 A THR 48 HELX_P A ARG 57 A ARG 64 1 3 17 A GLY 64 A GLY 71 HELX_P A TYR 68 A TYR 75 5 4 5 A ASP 122 A ASP 129 HELX_P A MET 142 A MET 149 1 5 21 A ARG 148 A ARG 155 HELX_P A VAL 163 A VAL 170 1 6 16 HYDROLASE TM1478, Methionine aminopeptidase, STRUCTURAL GENOMICS, JCSG, PSI, Protein Structure Initiative, Joint Center for Structural Genomics, HYDROLASE A ASP 183 A ASP 190 1 A PRO 184 A PRO 191 -0.03 Q9X1I7_THEMA UNP 1 1 Q9X1I7 MIRIKTPSEIEKMKKAGKAVAVALREVRKVIVPGKTAWDVETLVLEIFKKLRVKPAFKGYGGYKYATCVSVNEEVVHGLP LKEKVFKEGDIVSVDVGAVYQGLYGDAAVTYIVGETDERGKELVRVTREVLEKAIKMIKPGIRLGDVSHCIQETVESVGF NVIRDYVGHGVGRELHEDPQIPNYGTPGTGVVLRKGMTLAIEPMVSEGDWRVVVKEDGWTAVTVDGSRCAHFEHTILITE NGAEILTKEG 1 250 1O0X 6 255 Q9X1I7 A 1 13 262 1 expression tag MET -6 1O0X A Q9X1I7 UNP 1 1 expression tag GLY -5 1O0X A Q9X1I7 UNP 2 1 expression tag SER -4 1O0X A Q9X1I7 UNP 3 1 expression tag ASP -3 1O0X A Q9X1I7 UNP 4 1 expression tag LYS -2 1O0X A Q9X1I7 UNP 5 1 expression tag ILE -1 1O0X A Q9X1I7 UNP 6 1 expression tag HIS 0 1O0X A Q9X1I7 UNP 7 1 expression tag HIS 1 1O0X A Q9X1I7 UNP 8 1 expression tag HIS 2 1O0X A Q9X1I7 UNP 9 1 expression tag HIS 3 1O0X A Q9X1I7 UNP 10 1 expression tag HIS 4 1O0X A Q9X1I7 UNP 11 1 expression tag HIS 5 1O0X A Q9X1I7 UNP 12 3 3 3 5 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A LEU 108 A LEU 115 A ILE 117 A ILE 124 A ILE 96 A ILE 103 A TYR 105 A TYR 112 A LYS 59 A LYS 66 A PRO 60 A PRO 67 A LEU 108 A LEU 115 A ILE 117 A ILE 124 A ILE 96 A ILE 103 A TYR 105 A TYR 112 A THR 72 A THR 79 A VAL 76 A VAL 83 A ASN 166 A ASN 173 A VAL 167 A VAL 174 A MET 209 A MET 216 A SER 211 A SER 218 A CYS 234 A CYS 241 A HIS 236 A HIS 243 A GLU 182 A GLU 189 A ILE 186 A ILE 193 A GLY 173 A GLY 180 A GLY 175 A GLY 182 A THR 203 A THR 210 A ILE 206 A ILE 213 A HIS 239 A HIS 246 A ILE 243 A ILE 250 A ALA 248 A ALA 255 A ILE 250 A ILE 257 A VAL 217 A VAL 224 A VAL 219 A VAL 226 A ALA 226 A ALA 233 A THR 228 A THR 235 96 P 43 21 2