1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Pari, K. Mueller, G.A. Derose, E.F. Kirby, T.W. London, R.E. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N N N 145 S C N 146 N C N 147 N O N 148 S C N 149 N C N 150 N C N 151 N C N 152 N O N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N N N 167 S C N 168 N C N 169 N O N 170 N C N 171 N C N 172 N C N 173 N C N 174 N O N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N N N 189 S C N 190 N C N 191 N O N 192 N C N 193 N C N 194 N C N 195 N C N 196 N N N 197 N O N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N N N 214 S C N 215 N C N 216 N O N 217 N C N 218 N C N 219 N S N 220 N C N 221 N O N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N N N 234 S C N 235 N C N 236 N O N 237 N C Y 238 N C Y 239 N C Y 240 N C Y 241 N C Y 242 N C Y 243 N C N 244 N O N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N N N 257 S C N 258 N C N 259 N O N 260 N C N 261 N C N 262 N C N 263 N O N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N O N 279 N O N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N N N 288 S C N 289 N C N 290 N O N 291 R C N 292 N O N 293 N C N 294 N O N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 N C Y 309 N C Y 310 N C Y 311 N C Y 312 N N Y 313 N C Y 314 N C Y 315 N C Y 316 N C Y 317 N C N 318 N O N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N N N 332 S C N 333 N C N 334 N O N 335 N C Y 336 N C Y 337 N C Y 338 N C Y 339 N C Y 340 N C Y 341 N C N 342 N O N 343 N O N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N N N 356 S C N 357 N C N 358 N O N 359 N C N 360 N C N 361 N C N 362 N O N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N doub N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N doub N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N doub N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N doub N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N doub N 229 N sing N 230 N sing N 231 N sing N 232 N sing Y 233 N doub Y 234 N sing Y 235 N sing N 236 N sing Y 237 N doub N 238 N sing Y 239 N doub N 240 N sing Y 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N doub N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N doub N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N doub N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N doub N 298 N sing N 299 N sing N 300 N sing N 301 N sing Y 302 N doub Y 303 N sing Y 304 N sing N 305 N sing Y 306 N doub Y 307 N sing Y 308 N sing N 309 N sing Y 310 N sing Y 311 N doub N 312 N sing Y 313 N doub N 314 N sing Y 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N doub N 326 N sing N 327 N sing N 328 N sing N 329 N sing Y 330 N doub Y 331 N sing Y 332 N sing N 333 N sing Y 334 N doub N 335 N sing Y 336 N doub N 337 N sing Y 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N doub N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing US Biochemistry BICHAW 0033 0006-2960 42 639 650 10.1021/bi0204894 12534276 Solution Structure of the Rnase H Domain of the HIV-1 Reverse Transcriptase in the Presence of Magnesium 2003 10.2210/pdb1o1w/pdb pdb_00001o1w 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 15276.277 RIBONUCLEASE H 3.1.26.4 1 man polymer RNASE H no no MNELYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNRGRQKVVTLTDTTNQKTELQAIYLALQDSGLEVNIVTDSQYA LGIIQAQPDQSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVL MNELYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNRGRQKVVTLTDTTNQKTELQAIYLALQDSGLEVNIVTDSQYA LGIIQAQPDQSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKVL A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Lentivirus Escherichia sample 11676 Human immunodeficiency virus 1 STRAIN HXB2 562 Escherichia coli BLR database_2 pdbx_nmr_software pdbx_struct_assembly pdbx_struct_oper_list struct_ref_seq_dif chem_comp_atom chem_comp_bond repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations Data collection 1 0 2003-02-18 1 1 2008-04-26 1 2 2011-07-13 1 3 2022-02-23 1 4 2023-12-27 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_software.name _struct_ref_seq_dif.details 2003-02-18 SPRSDE RCSB Y RCSB 2003-02-12 REL REL THIS STRUCTURE WAS DETERMINED USING STANDARD 3D HETERONUCLEAR TECHNIQUES. structures with the lowest energy 40 7 3D_13C-SEPARATED_NOESY 3D_ 15N-SEPARATED_NOESY 6.8 AMBIENT 298 K AUTOMATED STRUCTURE DETERMINATION WITH ARIA 1 1.1 MM RNASE H U-15N, 13C MM TRIS, PH6.8; 90% H20, 10% D20 BRUNGER ET AL refinement CNS 1.0 structure solution ARIA 1.0 structure solution NMRPipe 2.1 structure solution NMRView 5.0.4 600 Varian INOVA 500 Varian INOVA MET 1 n 1 MET 1 A ASN 2 n 2 ASN 2 A GLU 3 n 3 GLU 3 A LEU 4 n 4 LEU 4 A TYR 5 n 5 TYR 5 A GLN 6 n 6 GLN 6 A LEU 7 n 7 LEU 7 A GLU 8 n 8 GLU 8 A LYS 9 n 9 LYS 9 A GLU 10 n 10 GLU 10 A PRO 11 n 11 PRO 11 A ILE 12 n 12 ILE 12 A VAL 13 n 13 VAL 13 A GLY 14 n 14 GLY 14 A ALA 15 n 15 ALA 15 A GLU 16 n 16 GLU 16 A THR 17 n 17 THR 17 A PHE 18 n 18 PHE 18 A TYR 19 n 19 TYR 19 A VAL 20 n 20 VAL 20 A ASP 21 n 21 ASP 21 A GLY 22 n 22 GLY 22 A ALA 23 n 23 ALA 23 A ALA 24 n 24 ALA 24 A ASN 25 n 25 ASN 25 A ARG 26 n 26 ARG 26 A GLU 27 n 27 GLU 27 A THR 28 n 28 THR 28 A LYS 29 n 29 LYS 29 A LEU 30 n 30 LEU 30 A GLY 31 n 31 GLY 31 A LYS 32 n 32 LYS 32 A ALA 33 n 33 ALA 33 A GLY 34 n 34 GLY 34 A TYR 35 n 35 TYR 35 A VAL 36 n 36 VAL 36 A THR 37 n 37 THR 37 A ASN 38 n 38 ASN 38 A ARG 39 n 39 ARG 39 A GLY 40 n 40 GLY 40 A ARG 41 n 41 ARG 41 A GLN 42 n 42 GLN 42 A LYS 43 n 43 LYS 43 A VAL 44 n 44 VAL 44 A VAL 45 n 45 VAL 45 A THR 46 n 46 THR 46 A LEU 47 n 47 LEU 47 A THR 48 n 48 THR 48 A ASP 49 n 49 ASP 49 A THR 50 n 50 THR 50 A THR 51 n 51 THR 51 A ASN 52 n 52 ASN 52 A GLN 53 n 53 GLN 53 A LYS 54 n 54 LYS 54 A THR 55 n 55 THR 55 A GLU 56 n 56 GLU 56 A LEU 57 n 57 LEU 57 A GLN 58 n 58 GLN 58 A ALA 59 n 59 ALA 59 A ILE 60 n 60 ILE 60 A TYR 61 n 61 TYR 61 A LEU 62 n 62 LEU 62 A ALA 63 n 63 ALA 63 A LEU 64 n 64 LEU 64 A GLN 65 n 65 GLN 65 A ASP 66 n 66 ASP 66 A SER 67 n 67 SER 67 A GLY 68 n 68 GLY 68 A LEU 69 n 69 LEU 69 A GLU 70 n 70 GLU 70 A VAL 71 n 71 VAL 71 A ASN 72 n 72 ASN 72 A ILE 73 n 73 ILE 73 A VAL 74 n 74 VAL 74 A THR 75 n 75 THR 75 A ASP 76 n 76 ASP 76 A SER 77 n 77 SER 77 A GLN 78 n 78 GLN 78 A TYR 79 n 79 TYR 79 A ALA 80 n 80 ALA 80 A LEU 81 n 81 LEU 81 A GLY 82 n 82 GLY 82 A ILE 83 n 83 ILE 83 A ILE 84 n 84 ILE 84 A GLN 85 n 85 GLN 85 A ALA 86 n 86 ALA 86 A GLN 87 n 87 GLN 87 A PRO 88 n 88 PRO 88 A ASP 89 n 89 ASP 89 A GLN 90 n 90 GLN 90 A SER 91 n 91 SER 91 A GLU 92 n 92 GLU 92 A SER 93 n 93 SER 93 A GLU 94 n 94 GLU 94 A LEU 95 n 95 LEU 95 A VAL 96 n 96 VAL 96 A ASN 97 n 97 ASN 97 A GLN 98 n 98 GLN 98 A ILE 99 n 99 ILE 99 A ILE 100 n 100 ILE 100 A GLU 101 n 101 GLU 101 A GLN 102 n 102 GLN 102 A LEU 103 n 103 LEU 103 A ILE 104 n 104 ILE 104 A LYS 105 n 105 LYS 105 A LYS 106 n 106 LYS 106 A GLU 107 n 107 GLU 107 A LYS 108 n 108 LYS 108 A VAL 109 n 109 VAL 109 A TYR 110 n 110 TYR 110 A LEU 111 n 111 LEU 111 A ALA 112 n 112 ALA 112 A TRP 113 n 113 TRP 113 A VAL 114 n 114 VAL 114 A PRO 115 n 115 PRO 115 A ALA 116 n 116 ALA 116 A HIS 117 n 117 HIS 117 A LYS 118 n 118 LYS 118 A GLY 119 n 119 GLY 119 A ILE 120 n 120 ILE 120 A GLY 121 n 121 GLY 121 A GLY 122 n 122 GLY 122 A ASN 123 n 123 ASN 123 A GLU 124 n 124 GLU 124 A GLN 125 n 125 GLN 125 A VAL 126 n 126 VAL 126 A ASP 127 n 127 ASP 127 A LYS 128 n 128 LYS 128 A LEU 129 n 129 LEU 129 A VAL 130 n 130 VAL 130 A SER 131 n 131 SER 131 A ALA 132 n 132 ALA 132 A GLY 133 n 133 GLY 133 A ILE 134 n 134 ILE 134 A ARG 135 n 135 ARG 135 A LYS 136 n 136 LYS 136 A VAL 137 n 137 VAL 137 A LEU 138 n 138 LEU 138 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O VAL 45 A O VAL 45 A N ALA 33 A N ALA 33 A O VAL 36 A O VAL 36 A N TYR 19 A N TYR 19 A N PHE 18 A N PHE 18 A O ASN 72 A O ASN 72 A N VAL 71 A N VAL 71 A O LYS 108 A O LYS 108 1 A A HG H SER GLY 67 68 1.35 2 A A HD1 H TYR VAL 19 36 1.33 2 A A HA HG3 ILE PRO 84 88 1.35 3 A A HH HB3 TYR ASP 19 21 1.27 3 A A HB3 HG2 GLU GLU 70 107 1.35 4 A A HH HE21 TYR GLN 5 87 1.06 4 A A HD1 H TYR VAL 19 36 1.26 4 A A HB HB3 THR ARG 37 41 1.33 7 A A HD1 H TYR VAL 19 36 1.26 7 A A HB2 HA3 TYR GLY 19 121 1.33 2 A A CE1 CZ TYR TYR 19 19 0.092 0.013 1.381 1.473 N 2 A A CZ CE2 TYR TYR 19 19 -0.095 0.013 1.381 1.286 N 4 A A CE1 CZ TYR TYR 35 35 -0.079 0.013 1.381 1.302 N 1 A ASN 2 53.94 -157.96 1 A TYR 5 173.36 -179.46 1 A GLU 8 -110.69 -89.66 1 A LYS 9 59.19 0.50 1 A PRO 11 -39.74 122.17 1 A LYS 29 50.06 70.36 1 A LEU 30 -173.09 149.99 1 A ALA 33 -165.35 118.59 1 A ASN 38 -55.93 -4.40 1 A LEU 69 -103.90 -85.99 1 A SER 77 -165.10 108.44 1 A ALA 86 -90.22 47.65 1 A GLN 87 32.85 70.53 1 A PRO 88 -81.08 32.76 1 A GLN 90 -163.78 20.68 1 A GLU 92 49.25 -132.40 1 A SER 93 -38.88 144.66 1 A GLU 107 -92.93 -80.77 1 A PRO 115 -38.16 111.50 1 A ALA 116 169.08 -133.96 1 A HIS 117 -179.24 -1.96 1 A ASP 127 -97.02 -72.29 1 A LYS 128 -161.72 34.86 1 A LEU 129 55.79 79.68 1 A SER 131 -109.14 61.61 1 A ILE 134 -90.81 53.52 1 A ARG 135 -141.34 33.40 2 A ASN 2 -99.58 -158.89 2 A LEU 4 -148.69 -24.30 2 A GLU 8 -120.58 -85.63 2 A LYS 9 57.49 3.75 2 A PRO 11 -43.30 103.65 2 A ASP 21 -171.62 133.36 2 A ASN 25 -50.47 100.69 2 A ALA 33 -164.50 119.02 2 A ASN 38 -55.43 -6.35 2 A LEU 69 -132.13 -95.73 2 A SER 77 -165.66 111.77 2 A ALA 86 -97.74 47.30 2 A GLN 87 35.53 68.26 2 A PRO 88 -82.87 33.27 2 A GLN 90 -165.62 21.14 2 A GLU 92 52.09 -121.94 2 A SER 93 -37.92 142.87 2 A LYS 108 162.16 166.81 2 A PRO 115 -39.87 111.68 2 A ALA 116 178.52 -160.49 2 A HIS 117 -177.94 46.86 2 A ILE 120 -160.95 -85.46 2 A ASN 123 44.19 29.23 2 A VAL 126 56.66 83.84 2 A ASP 127 -166.46 -21.25 2 A LYS 128 -147.56 27.46 2 A ALA 132 57.69 -175.40 3 A ASN 2 -83.25 -93.97 3 A GLU 3 -132.97 -45.26 3 A LEU 4 -156.12 18.56 3 A TYR 5 174.77 -178.17 3 A LYS 9 59.04 -10.19 3 A PRO 11 -32.69 112.30 3 A ASP 21 -172.89 138.88 3 A ALA 33 -165.65 118.81 3 A ASN 38 -56.82 -4.49 3 A LEU 69 -113.07 -93.92 3 A SER 77 -163.03 93.56 3 A GLN 87 24.71 67.37 3 A ASP 89 -58.74 -9.18 3 A GLN 90 -166.34 20.63 3 A GLU 92 41.78 -120.25 3 A LYS 106 -128.51 -161.36 3 A GLU 107 -96.55 -60.58 3 A ALA 116 29.14 53.20 3 A GLU 124 59.43 -88.67 3 A VAL 126 -95.93 30.46 3 A ASP 127 54.71 71.55 3 A VAL 130 -123.81 -81.82 3 A ALA 132 60.34 -89.90 4 A ASN 2 -73.69 -152.36 4 A TYR 5 167.97 159.30 4 A GLU 8 -158.19 54.14 4 A ASP 21 -174.19 141.86 4 A ASN 38 -49.76 -17.64 4 A LEU 69 -104.30 -89.04 4 A SER 77 -161.77 96.67 4 A ALA 86 -91.79 32.74 4 A PRO 88 -56.52 -87.78 4 A ASP 89 59.39 -18.60 4 A GLN 90 -174.78 12.76 4 A GLU 92 52.80 -128.06 4 A LYS 106 -140.62 -153.15 4 A GLU 107 -96.26 -86.74 4 A ALA 116 149.28 142.75 4 A ILE 120 70.08 129.31 4 A GLN 125 -80.48 -98.59 4 A VAL 126 -155.22 63.71 4 A ASP 127 -82.29 -75.49 4 A ARG 135 -142.39 26.94 5 A ASN 2 -132.83 -78.79 5 A GLU 3 -170.25 -73.33 5 A TYR 5 166.53 170.30 5 A LEU 7 -68.66 96.10 5 A GLU 8 -97.32 -84.60 5 A LYS 9 64.36 -13.07 5 A PRO 11 -39.67 126.25 5 A ASN 25 -49.82 108.46 5 A LYS 29 46.92 76.55 5 A LEU 30 -178.02 138.90 5 A ALA 33 -162.06 117.84 5 A ASN 38 -53.67 -6.19 5 A SER 67 -58.17 95.38 5 A LEU 69 -145.61 -104.92 5 A SER 77 -163.84 98.99 5 A GLN 87 12.61 70.99 5 A PRO 88 -77.73 32.19 5 A GLN 90 -160.72 19.28 5 A GLU 92 48.98 -124.05 5 A SER 93 -38.53 144.36 5 A LYS 106 -126.24 -159.16 5 A GLU 107 -97.04 -87.16 5 A PRO 115 -37.24 112.06 5 A ALA 116 178.28 -34.74 5 A ILE 120 -164.59 -39.35 5 A ASN 123 -99.04 31.69 5 A GLN 125 -164.09 -52.52 5 A ASP 127 -163.26 2.43 5 A LEU 129 -96.57 -78.74 5 A VAL 130 -108.85 -152.48 5 A ALA 132 -132.50 -72.76 6 A ASN 2 -92.25 -144.66 6 A GLU 3 -128.34 -61.43 6 A GLN 6 -57.81 109.72 6 A GLU 8 -108.38 -83.73 6 A LYS 9 59.83 -2.32 6 A ASP 21 -172.46 130.45 6 A ALA 33 -162.24 117.57 6 A ASN 38 -54.47 -9.36 6 A LEU 69 -140.08 -95.63 6 A SER 77 -165.15 108.42 6 A GLN 87 -3.41 77.90 6 A PRO 88 -83.23 31.37 6 A GLN 90 -162.32 30.82 6 A GLU 92 43.61 -117.72 6 A SER 93 -44.57 151.20 6 A LYS 106 -132.43 -146.98 6 A LYS 108 156.15 167.64 6 A PRO 115 -37.55 152.54 6 A ALA 116 73.86 117.35 6 A GLU 124 -97.21 -83.89 6 A GLN 125 -108.66 -87.19 6 A ASP 127 -82.30 -158.66 6 A LEU 129 53.94 83.68 6 A SER 131 60.04 -90.67 6 A ILE 134 36.11 59.00 6 A LYS 136 -103.96 -138.47 7 A ASN 2 60.83 177.01 7 A LEU 4 -162.62 15.31 7 A TYR 5 172.78 153.51 7 A GLN 6 -58.11 101.72 7 A LEU 7 -59.62 101.76 7 A GLU 8 -107.08 -66.70 7 A LYS 9 61.67 -75.65 7 A VAL 13 -141.78 10.03 7 A LYS 29 49.28 79.74 7 A LEU 30 178.05 143.91 7 A ALA 33 -164.67 118.35 7 A ASN 38 -61.11 1.89 7 A LEU 69 -100.22 -86.64 7 A SER 77 -165.91 99.22 7 A ILE 84 -49.49 -18.41 7 A ALA 86 -94.64 47.81 7 A GLN 87 34.95 70.98 7 A PRO 88 -84.05 31.15 7 A GLN 90 -163.69 13.39 7 A GLU 92 60.32 -128.32 7 A LYS 105 -68.73 8.64 7 A LYS 108 179.39 169.28 7 A ALA 116 168.46 -146.01 7 A HIS 117 169.68 42.71 7 A ILE 120 -167.61 -38.78 7 A GLU 124 -162.41 -44.53 7 A GLN 125 -171.10 -20.00 7 A ASP 127 59.56 89.15 7 A LEU 129 -164.48 -7.17 7 A SER 131 -153.24 -84.75 7 A ALA 132 -166.18 46.13 7 A LYS 136 -69.23 -179.49 SOLUTION STRUCTURE OF THE RNASE H DOMAIN OF THE HIV-1 REVERSE TRANSCRIPTASE IN THE PRESENCE OF MAGNESIUM 1 N N A THR 51 A THR 51 HELX_P A LEU 64 A LEU 64 1 1 14 A SER 77 A SER 77 HELX_P A GLN 85 A GLN 85 1 2 9 A SER 93 A SER 93 HELX_P A LYS 106 A LYS 106 1 3 14 HYDROLASE HIV-1, RNASE H DOMAIN, HIV-1 REVERSE TRANSCRIPTASE, SOLUTION STRUCTURE, METAL BINDING, HYDROLASE POL_HV1H2 UNP 1 P04585 582 715 1O1W 5 138 P04585 A 1 5 138 1 cloning artifact MET 1 1O1W A P04585 UNP 1 1 cloning artifact ASN 2 1O1W A P04585 UNP 2 1 cloning artifact GLU 3 1O1W A P04585 UNP 3 1 cloning artifact LEU 4 1O1W A P04585 UNP 4 5 anti-parallel anti-parallel parallel parallel A ARG 41 A ARG 41 A THR 46 A THR 46 A LYS 32 A LYS 32 A THR 37 A THR 37 A THR 17 A THR 17 A VAL 20 A VAL 20 A GLU 70 A GLU 70 A VAL 74 A VAL 74 A LYS 108 A LYS 108 A ALA 112 A ALA 112 1 P 1