0.015699
0.000000
0.000000
0.000000
0.015985
0.000000
0.000000
0.000000
0.014374
0.00000
0.00000
0.00000
Katz, B.A.
Elrod, K.
Verner, E.
Mackman, R.L.
Luong, C.
Shrader, W.D.
Sendzik, M.
Spencer, J.R.
Sprengeler, P.A.
Kolesnikov, A.
Tai, V.W.
Hui, H.C.
Breitenbucher, J.G.
Allen, D.
Janc, J.W.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.0
90.0
90.0
63.70
62.56
69.57
C24 H19 N5 O5 -2
457.438
2-(2'-AMINO-5-{5-[AMINO(IMINIO)METHYL]-1H-BENZIMIDAZOL-2-YL}-6-OXIDO-1,1'-BIPHENYL-3-YL)SUCCINATE
CRA_18607
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Ca 2
40.078
CALCIUM ION
non-polymer
Cl -1
35.453
CHLORIDE ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Y
1
N
C
Y
2
N
C
Y
3
N
C
Y
4
N
C
Y
5
N
C
Y
6
N
C
N
7
N
C
N
8
N
N
N
9
N
N
Y
10
N
N
Y
11
N
N
Y
12
N
C
Y
13
N
C
Y
14
N
C
Y
15
N
C
N
16
R
C
N
17
N
C
N
18
N
O
N
19
N
O
N
20
N
C
N
21
N
C
N
22
N
O
N
23
N
O
Y
24
N
C
Y
25
N
C
Y
26
N
C
N
27
N
O
Y
28
N
C
Y
29
N
C
Y
30
N
C
Y
31
N
C
Y
32
N
C
Y
33
N
C
N
34
N
N
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
N
N
55
S
C
N
56
N
C
N
57
N
O
N
58
N
C
N
59
N
O
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
N
N
68
S
C
N
69
N
C
N
70
N
O
N
71
N
C
N
72
N
C
N
73
N
C
N
74
N
N
N
75
N
C
N
76
N
N
N
77
N
N
N
78
N
O
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
O
N
101
N
N
N
102
N
O
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
N
N
112
S
C
N
113
N
C
N
114
N
O
N
115
N
C
N
116
N
C
N
117
N
O
N
118
N
O
N
119
N
O
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
CA
N
128
N
CL
N
129
N
N
N
130
R
C
N
131
N
C
N
132
N
O
N
133
N
C
N
134
N
S
N
135
N
O
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
N
N
144
S
C
N
145
N
C
N
146
N
O
N
147
N
C
N
148
N
C
N
149
N
C
N
150
N
O
N
151
N
N
N
152
N
O
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
N
N
164
S
C
N
165
N
C
N
166
N
O
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
O
N
171
N
O
N
172
N
O
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
N
N
183
N
C
N
184
N
C
N
185
N
O
N
186
N
O
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
N
N
193
S
C
N
194
N
C
N
195
N
O
N
196
N
C
Y
197
N
C
Y
198
N
N
Y
199
N
C
Y
200
N
C
Y
201
N
N
N
202
N
O
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
O
N
214
N
H
N
215
N
H
N
216
N
N
N
217
S
C
N
218
N
C
N
219
N
O
N
220
S
C
N
221
N
C
N
222
N
C
N
223
N
C
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
N
N
239
S
C
N
240
N
C
N
241
N
O
N
242
N
C
N
243
N
C
N
244
N
C
N
245
N
C
N
246
N
O
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
N
N
261
S
C
N
262
N
C
N
263
N
O
N
264
N
C
N
265
N
C
N
266
N
C
N
267
N
C
N
268
N
N
N
269
N
O
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
N
N
286
S
C
N
287
N
C
N
288
N
O
N
289
N
C
N
290
N
C
N
291
N
S
N
292
N
C
N
293
N
O
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
N
N
306
S
C
N
307
N
C
N
308
N
O
N
309
N
C
Y
310
N
C
Y
311
N
C
Y
312
N
C
Y
313
N
C
Y
314
N
C
Y
315
N
C
N
316
N
O
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
N
N
329
S
C
N
330
N
C
N
331
N
O
N
332
N
C
N
333
N
C
N
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
N
N
346
S
C
N
347
N
C
N
348
N
O
N
349
N
C
N
350
N
O
N
351
N
O
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
N
N
360
S
C
N
361
N
C
N
362
N
O
N
363
R
C
N
364
N
O
N
365
N
C
N
366
N
O
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
N
N
377
S
C
N
378
N
C
N
379
N
O
N
380
N
C
Y
381
N
C
Y
382
N
C
Y
383
N
C
Y
384
N
N
Y
385
N
C
Y
386
N
C
Y
387
N
C
Y
388
N
C
Y
389
N
C
N
390
N
O
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
N
N
404
S
C
N
405
N
C
N
406
N
O
N
407
N
C
Y
408
N
C
Y
409
N
C
Y
410
N
C
Y
411
N
C
Y
412
N
C
Y
413
N
C
N
414
N
O
N
415
N
O
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
N
N
428
S
C
N
429
N
C
N
430
N
O
N
431
N
C
N
432
N
C
N
433
N
C
N
434
N
O
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
Y
1
N
doub
Y
2
N
sing
N
3
N
sing
Y
4
N
sing
N
5
N
sing
Y
6
N
doub
N
7
N
sing
Y
8
N
sing
Y
9
N
sing
Y
10
N
doub
Y
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
doub
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
Y
19
N
sing
N
20
N
sing
Y
21
N
doub
Y
22
N
sing
Y
23
N
doub
Y
24
N
sing
Y
25
N
sing
N
26
N
sing
N
27
N
sing
Y
28
N
doub
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
doub
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
doub
N
38
N
sing
Y
39
N
sing
N
40
N
sing
Y
41
N
doub
Y
42
N
sing
N
43
N
sing
Y
44
N
doub
Y
45
N
sing
Y
46
N
sing
N
47
N
sing
Y
48
N
doub
N
49
N
sing
Y
50
N
sing
N
51
N
sing
Y
52
N
doub
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
doub
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
doub
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
doub
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
doub
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
doub
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
doub
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
doub
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
doub
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
doub
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
Y
196
N
sing
Y
197
N
doub
Y
198
N
doub
N
199
N
sing
Y
200
N
sing
N
201
N
sing
Y
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
doub
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
doub
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
doub
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
doub
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
doub
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
Y
304
N
doub
Y
305
N
sing
Y
306
N
sing
N
307
N
sing
Y
308
N
doub
N
309
N
sing
Y
310
N
doub
N
311
N
sing
Y
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
doub
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
doub
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
doub
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
doub
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
Y
373
N
doub
Y
374
N
sing
Y
375
N
sing
N
376
N
sing
Y
377
N
doub
Y
378
N
sing
Y
379
N
sing
N
380
N
sing
Y
381
N
sing
Y
382
N
doub
N
383
N
sing
Y
384
N
doub
N
385
N
sing
Y
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
doub
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
Y
401
N
doub
Y
402
N
sing
Y
403
N
sing
N
404
N
sing
Y
405
N
doub
N
406
N
sing
Y
407
N
doub
N
408
N
sing
Y
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
doub
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
329
93
120
10.1016/S0022-2836(03)00399-1
12742021
Elaborate manifold of short hydrogen bond arrays mediating binding of active site-directed serine protease
inhibitors.
2003
10.2210/pdb1o36/pdb
pdb_00001o36
298
1
IMAGE PLATE
2001-06-28
RIGAKU RAXIS IV
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
23324.287
BETA-TRYPSIN
3.4.21.4
1
nat
polymer
40.078
CALCIUM ION
1
syn
non-polymer
35.453
CHLORIDE ION
1
syn
non-polymer
457.438
2-(2'-AMINO-5-{5-[AMINO(IMINIO)METHYL]-1H-BENZIMIDAZOL-2-YL}-6-OXIDO-1,1'-BIPHENYL-3-YL)SUCCINATE
1
syn
non-polymer
18.015
water
141
nat
water
E.C.3.4.21.4
no
no
IVGGYTCGANTVPYQVSLNSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNT
LNNDIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNM
FCAGYLEGGKDSCQGDSGGPVVCSGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIASN
IVGGYTCGANTVPYQVSLNSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNT
LNNDIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNM
FCAGYLEGGKDSCQGDSGGPVVCSGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIASN
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
cattle
Bos
sample
9913
PANCREAS
Bos taurus
1
2.97
58.59
VAPOR DIFFUSION
8.10
magnesium sulfate soak at target pH (7.03). vapor diffusion at 298 K, pH 8.10
298
software
chem_comp_atom
chem_comp_bond
database_2
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Refinement description
Data collection
Database references
Derived calculations
1
0
2003-09-02
1
1
2008-04-26
1
2
2011-07-13
1
3
2017-10-04
1
4
2023-12-27
_software.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Bovine trypsin complex with different inhibitor
RCSB
Y
RCSB
2003-03-06
REL
REL
CA
CALCIUM ION
CL
CHLORIDE ION
607
2-(2'-AMINO-5-{5-[AMINO(IMINIO)METHYL]-1H-BENZIMIDAZOL-2-YL}-6-OXIDO-1,1'-BIPHENYL-3-YL)SUCCINATE
HOH
water
CA
247
2
CA
CA
247
A
CL
260
3
CL
CL
260
A
BZM
246
4
607
607
246
A
HOH
248
5
HOH
HOH
248
A
HOH
249
5
HOH
HOH
249
A
HOH
250
5
HOH
HOH
250
A
HOH
252
5
HOH
HOH
252
A
HOH
253
5
HOH
HOH
253
A
HOH
254
5
HOH
HOH
254
A
HOH
256
5
HOH
HOH
256
A
HOH
258
5
HOH
HOH
258
A
HOH
259
5
HOH
HOH
259
A
HOH
261
5
HOH
HOH
261
A
HOH
262
5
HOH
HOH
262
A
HOH
263
5
HOH
HOH
263
A
HOH
264
5
HOH
HOH
264
A
HOH
266
5
HOH
HOH
266
A
HOH
267
5
HOH
HOH
267
A
HOH
268
5
HOH
HOH
268
A
HOH
269
5
HOH
HOH
269
A
HOH
270
5
HOH
HOH
270
A
HOH
272
5
HOH
HOH
272
A
HOH
273
5
HOH
HOH
273
A
HOH
274
5
HOH
HOH
274
A
HOH
275
5
HOH
HOH
275
A
HOH
277
5
HOH
HOH
277
A
HOH
278
5
HOH
HOH
278
A
HOH
280
5
HOH
HOH
280
A
HOH
281
5
HOH
HOH
281
A
HOH
283
5
HOH
HOH
283
A
HOH
284
5
HOH
HOH
284
A
HOH
285
5
HOH
HOH
285
A
HOH
286
5
HOH
HOH
286
A
HOH
287
5
HOH
HOH
287
A
HOH
288
5
HOH
HOH
288
A
HOH
289
5
HOH
HOH
289
A
HOH
290
5
HOH
HOH
290
A
HOH
291
5
HOH
HOH
291
A
HOH
292
5
HOH
HOH
292
A
HOH
293
5
HOH
HOH
293
A
HOH
295
5
HOH
HOH
295
A
HOH
296
5
HOH
HOH
296
A
HOH
297
5
HOH
HOH
297
A
HOH
300
5
HOH
HOH
300
A
HOH
302
5
HOH
HOH
302
A
HOH
308
5
HOH
HOH
308
A
HOH
309
5
HOH
HOH
309
A
HOH
312
5
HOH
HOH
312
A
HOH
315
5
HOH
HOH
315
A
HOH
317
5
HOH
HOH
317
A
HOH
318
5
HOH
HOH
318
A
HOH
319
5
HOH
HOH
319
A
HOH
321
5
HOH
HOH
321
A
HOH
323
5
HOH
HOH
323
A
HOH
326
5
HOH
HOH
326
A
HOH
327
5
HOH
HOH
327
A
HOH
328
5
HOH
HOH
328
A
HOH
331
5
HOH
HOH
331
A
HOH
333
5
HOH
HOH
333
A
HOH
337
5
HOH
HOH
337
A
HOH
339
5
HOH
HOH
339
A
HOH
342
5
HOH
HOH
342
A
HOH
346
5
HOH
HOH
346
A
HOH
348
5
HOH
HOH
348
A
HOH
349
5
HOH
HOH
349
A
HOH
351
5
HOH
HOH
351
A
HOH
352
5
HOH
HOH
352
A
HOH
354
5
HOH
HOH
354
A
HOH
358
5
HOH
HOH
358
A
HOH
360
5
HOH
HOH
360
A
HOH
361
5
HOH
HOH
361
A
HOH
363
5
HOH
HOH
363
A
HOH
364
5
HOH
HOH
364
A
HOH
369
5
HOH
HOH
369
A
HOH
374
5
HOH
HOH
374
A
HOH
375
5
HOH
HOH
375
A
HOH
376
5
HOH
HOH
376
A
HOH
377
5
HOH
HOH
377
A
HOH
378
5
HOH
HOH
378
A
HOH
380
5
HOH
HOH
380
A
HOH
381
5
HOH
HOH
381
A
HOH
382
5
HOH
HOH
382
A
HOH
383
5
HOH
HOH
383
A
HOH
384
5
HOH
HOH
384
A
HOH
385
5
HOH
HOH
385
A
HOH
389
5
HOH
HOH
389
A
HOH
390
5
HOH
HOH
390
A
HOH
391
5
HOH
HOH
391
A
HOH
392
5
HOH
HOH
392
A
HOH
393
5
HOH
HOH
393
A
HOH
395
5
HOH
HOH
395
A
HOH
402
5
HOH
HOH
402
A
HOH
403
5
HOH
HOH
403
A
HOH
406
5
HOH
HOH
406
A
HOH
412
5
HOH
HOH
412
A
HOH
421
5
HOH
HOH
421
A
HOH
430
5
HOH
HOH
430
A
HOH
431
5
HOH
HOH
431
A
HOH
432
5
HOH
HOH
432
A
HOH
439
5
HOH
HOH
439
A
HOH
450
5
HOH
HOH
450
A
HOH
468
5
HOH
HOH
468
A
HOH
481
5
HOH
HOH
481
A
HOH
489
5
HOH
HOH
489
A
HOH
497
5
HOH
HOH
497
A
HOH
502
5
HOH
HOH
502
A
HOH
504
5
HOH
HOH
504
A
HOH
536
5
HOH
HOH
536
A
HOH
539
5
HOH
HOH
539
A
HOH
542
5
HOH
HOH
542
A
HOH
543
5
HOH
HOH
543
A
HOH
547
5
HOH
HOH
547
A
HOH
548
5
HOH
HOH
548
A
HOH
560
5
HOH
HOH
560
A
HOH
568
5
HOH
HOH
568
A
HOH
570
5
HOH
HOH
570
A
HOH
636
5
HOH
HOH
636
A
HOH
642
5
HOH
HOH
642
A
HOH
645
5
HOH
HOH
645
A
HOH
650
5
HOH
HOH
650
A
HOH
651
5
HOH
HOH
651
A
HOH
664
5
HOH
HOH
664
A
HOH
671
5
HOH
HOH
671
A
HOH
678
5
HOH
HOH
678
A
HOH
683
5
HOH
HOH
683
A
HOH
703
5
HOH
HOH
703
A
HOH
709
5
HOH
HOH
709
A
HOH
710
5
HOH
HOH
710
A
HOH
714
5
HOH
HOH
714
A
HOH
718
5
HOH
HOH
718
A
HOH
725
5
HOH
HOH
725
A
HOH
726
5
HOH
HOH
726
A
HOH
746
5
HOH
HOH
746
A
HOH
748
5
HOH
HOH
748
A
HOH
750
5
HOH
HOH
750
A
HOH
761
5
HOH
HOH
761
A
HOH
794
5
HOH
HOH
794
A
HOH
811
5
HOH
HOH
811
A
HOH
817
5
HOH
HOH
817
A
HOH
818
5
HOH
HOH
818
A
HOH
874
5
HOH
HOH
874
A
HOH
878
5
HOH
HOH
878
A
HOH
879
5
HOH
HOH
879
A
HOH
963
5
HOH
HOH
963
A
ILE
16
n
1
ILE
16
A
VAL
17
n
2
VAL
17
A
GLY
18
n
3
GLY
18
A
GLY
19
n
4
GLY
19
A
TYR
20
n
5
TYR
20
A
THR
21
n
6
THR
21
A
CYS
22
n
7
CYS
22
A
GLY
23
n
8
GLY
23
A
ALA
24
n
9
ALA
24
A
ASN
25
n
10
ASN
25
A
THR
26
n
11
THR
26
A
VAL
27
n
12
VAL
27
A
PRO
28
n
13
PRO
28
A
TYR
29
n
14
TYR
29
A
GLN
30
n
15
GLN
30
A
VAL
31
n
16
VAL
31
A
SER
32
n
17
SER
32
A
LEU
33
n
18
LEU
33
A
ASN
34
n
19
ASN
34
A
SER
37
n
20
SER
37
A
GLY
38
n
21
GLY
38
A
TYR
39
n
22
TYR
39
A
HIS
40
n
23
HIS
40
A
PHE
41
n
24
PHE
41
A
CYS
42
n
25
CYS
42
A
GLY
43
n
26
GLY
43
A
GLY
44
n
27
GLY
44
A
SER
45
n
28
SER
45
A
LEU
46
n
29
LEU
46
A
ILE
47
n
30
ILE
47
A
ASN
48
n
31
ASN
48
A
SER
49
n
32
SER
49
A
GLN
50
n
33
GLN
50
A
TRP
51
n
34
TRP
51
A
VAL
52
n
35
VAL
52
A
VAL
53
n
36
VAL
53
A
SER
54
n
37
SER
54
A
ALA
55
n
38
ALA
55
A
ALA
56
n
39
ALA
56
A
HIS
57
n
40
HIS
57
A
CYS
58
n
41
CYS
58
A
TYR
59
n
42
TYR
59
A
LYS
60
n
43
LYS
60
A
SER
61
n
44
SER
61
A
GLY
62
n
45
GLY
62
A
ILE
63
n
46
ILE
63
A
GLN
64
n
47
GLN
64
A
VAL
65
n
48
VAL
65
A
ARG
65
n
49
A
ARG
65
A
LEU
66
n
50
LEU
66
A
GLY
69
n
51
GLY
69
A
GLU
70
n
52
GLU
70
A
ASP
71
n
53
ASP
71
A
ASN
72
n
54
ASN
72
A
ILE
73
n
55
ILE
73
A
ASN
74
n
56
ASN
74
A
VAL
75
n
57
VAL
75
A
VAL
76
n
58
VAL
76
A
GLU
77
n
59
GLU
77
A
GLY
78
n
60
GLY
78
A
ASN
79
n
61
ASN
79
A
GLU
80
n
62
GLU
80
A
GLN
81
n
63
GLN
81
A
PHE
82
n
64
PHE
82
A
ILE
83
n
65
ILE
83
A
SER
84
n
66
SER
84
A
ALA
85
n
67
ALA
85
A
SER
86
n
68
SER
86
A
LYS
87
n
69
LYS
87
A
SER
88
n
70
SER
88
A
ILE
89
n
71
ILE
89
A
VAL
90
n
72
VAL
90
A
HIS
91
n
73
HIS
91
A
PRO
92
n
74
PRO
92
A
SER
93
n
75
SER
93
A
TYR
94
n
76
TYR
94
A
ASN
95
n
77
ASN
95
A
SER
96
n
78
SER
96
A
ASN
97
n
79
ASN
97
A
THR
98
n
80
THR
98
A
LEU
99
n
81
LEU
99
A
ASN
100
n
82
ASN
100
A
ASN
101
n
83
ASN
101
A
ASP
102
n
84
ASP
102
A
ILE
103
n
85
ILE
103
A
MET
104
n
86
MET
104
A
LEU
105
n
87
LEU
105
A
ILE
106
n
88
ILE
106
A
LYS
107
n
89
LYS
107
A
LEU
108
n
90
LEU
108
A
LYS
109
n
91
LYS
109
A
SER
110
n
92
SER
110
A
ALA
111
n
93
ALA
111
A
ALA
112
n
94
ALA
112
A
SER
113
n
95
SER
113
A
LEU
114
n
96
LEU
114
A
ASN
115
n
97
ASN
115
A
SER
116
n
98
SER
116
A
ARG
117
n
99
ARG
117
A
VAL
118
n
100
VAL
118
A
ALA
119
n
101
ALA
119
A
SER
120
n
102
SER
120
A
ILE
121
n
103
ILE
121
A
SER
122
n
104
SER
122
A
LEU
123
n
105
LEU
123
A
PRO
124
n
106
PRO
124
A
THR
125
n
107
THR
125
A
SER
127
n
108
SER
127
A
CYS
128
n
109
CYS
128
A
ALA
129
n
110
ALA
129
A
SER
130
n
111
SER
130
A
ALA
132
n
112
ALA
132
A
GLY
133
n
113
GLY
133
A
THR
134
n
114
THR
134
A
GLN
135
n
115
GLN
135
A
CYS
136
n
116
CYS
136
A
LEU
137
n
117
LEU
137
A
ILE
138
n
118
ILE
138
A
SER
139
n
119
SER
139
A
GLY
140
n
120
GLY
140
A
TRP
141
n
121
TRP
141
A
GLY
142
n
122
GLY
142
A
ASN
143
n
123
ASN
143
A
THR
144
n
124
THR
144
A
LYS
145
n
125
LYS
145
A
SER
146
n
126
SER
146
A
SER
147
n
127
SER
147
A
GLY
148
n
128
GLY
148
A
THR
149
n
129
THR
149
A
SER
150
n
130
SER
150
A
TYR
151
n
131
TYR
151
A
PRO
152
n
132
PRO
152
A
ASP
153
n
133
ASP
153
A
VAL
154
n
134
VAL
154
A
LEU
155
n
135
LEU
155
A
LYS
156
n
136
LYS
156
A
CYS
157
n
137
CYS
157
A
LEU
158
n
138
LEU
158
A
LYS
159
n
139
LYS
159
A
ALA
160
n
140
ALA
160
A
PRO
161
n
141
PRO
161
A
ILE
162
n
142
ILE
162
A
LEU
163
n
143
LEU
163
A
SER
164
n
144
SER
164
A
ASP
165
n
145
ASP
165
A
SER
166
n
146
SER
166
A
SER
167
n
147
SER
167
A
CYS
168
n
148
CYS
168
A
LYS
169
n
149
LYS
169
A
SER
170
n
150
SER
170
A
ALA
171
n
151
ALA
171
A
TYR
172
n
152
TYR
172
A
PRO
173
n
153
PRO
173
A
GLY
174
n
154
GLY
174
A
GLN
175
n
155
GLN
175
A
ILE
176
n
156
ILE
176
A
THR
177
n
157
THR
177
A
SER
178
n
158
SER
178
A
ASN
179
n
159
ASN
179
A
MET
180
n
160
MET
180
A
PHE
181
n
161
PHE
181
A
CYS
182
n
162
CYS
182
A
ALA
183
n
163
ALA
183
A
GLY
184
n
164
GLY
184
A
TYR
184
n
165
A
TYR
184
A
LEU
185
n
166
LEU
185
A
GLU
186
n
167
GLU
186
A
GLY
187
n
168
GLY
187
A
GLY
188
n
169
GLY
188
A
LYS
188
n
170
A
LYS
188
A
ASP
189
n
171
ASP
189
A
SER
190
n
172
SER
190
A
CYS
191
n
173
CYS
191
A
GLN
192
n
174
GLN
192
A
GLY
193
n
175
GLY
193
A
ASP
194
n
176
ASP
194
A
SER
195
n
177
SER
195
A
GLY
196
n
178
GLY
196
A
GLY
197
n
179
GLY
197
A
PRO
198
n
180
PRO
198
A
VAL
199
n
181
VAL
199
A
VAL
200
n
182
VAL
200
A
CYS
201
n
183
CYS
201
A
SER
202
n
184
SER
202
A
GLY
203
n
185
GLY
203
A
LYS
204
n
186
LYS
204
A
LEU
209
n
187
LEU
209
A
GLN
210
n
188
GLN
210
A
GLY
211
n
189
GLY
211
A
ILE
212
n
190
ILE
212
A
VAL
213
n
191
VAL
213
A
SER
214
n
192
SER
214
A
TRP
215
n
193
TRP
215
A
GLY
216
n
194
GLY
216
A
SER
217
n
195
SER
217
A
GLY
219
n
196
GLY
219
A
CYS
220
n
197
CYS
220
A
ALA
221
n
198
ALA
221
A
GLN
221
n
199
A
GLN
221
A
LYS
222
n
200
LYS
222
A
ASN
223
n
201
ASN
223
A
LYS
224
n
202
LYS
224
A
PRO
225
n
203
PRO
225
A
GLY
226
n
204
GLY
226
A
VAL
227
n
205
VAL
227
A
TYR
228
n
206
TYR
228
A
THR
229
n
207
THR
229
A
LYS
230
n
208
LYS
230
A
VAL
231
n
209
VAL
231
A
CYS
232
n
210
CYS
232
A
ASN
233
n
211
ASN
233
A
TYR
234
n
212
TYR
234
A
VAL
235
n
213
VAL
235
A
SER
236
n
214
SER
236
A
TRP
237
n
215
TRP
237
A
ILE
238
n
216
ILE
238
A
LYS
239
n
217
LYS
239
A
GLN
240
n
218
GLN
240
A
THR
241
n
219
THR
241
A
ILE
242
n
220
ILE
242
A
ALA
243
n
221
ALA
243
A
SER
244
n
222
SER
244
A
ASN
245
n
223
ASN
245
A
author_defined_assembly
1
monomeric
A
GLU
70
A
OE2
GLU
52
1_555
A
CA
247
B
CA
CA
1_555
A
ASN
72
A
O
ASN
54
1_555
90.2
A
GLU
70
A
OE2
GLU
52
1_555
A
CA
247
B
CA
CA
1_555
A
VAL
75
A
O
VAL
57
1_555
170.2
A
ASN
72
A
O
ASN
54
1_555
A
CA
247
B
CA
CA
1_555
A
VAL
75
A
O
VAL
57
1_555
97.1
A
GLU
70
A
OE2
GLU
52
1_555
A
CA
247
B
CA
CA
1_555
A
GLU
80
A
OE2
GLU
62
1_555
89.9
A
ASN
72
A
O
ASN
54
1_555
A
CA
247
B
CA
CA
1_555
A
GLU
80
A
OE2
GLU
62
1_555
155.4
A
VAL
75
A
O
VAL
57
1_555
A
CA
247
B
CA
CA
1_555
A
GLU
80
A
OE2
GLU
62
1_555
86.1
A
GLU
70
A
OE2
GLU
52
1_555
A
CA
247
B
CA
CA
1_555
A
HOH
248
E
O
HOH
1_555
83.5
A
ASN
72
A
O
ASN
54
1_555
A
CA
247
B
CA
CA
1_555
A
HOH
248
E
O
HOH
1_555
116.1
A
VAL
75
A
O
VAL
57
1_555
A
CA
247
B
CA
CA
1_555
A
HOH
248
E
O
HOH
1_555
87.5
A
GLU
80
A
OE2
GLU
62
1_555
A
CA
247
B
CA
CA
1_555
A
HOH
248
E
O
HOH
1_555
88.3
A
GLU
70
A
OE2
GLU
52
1_555
A
CA
247
B
CA
CA
1_555
A
HOH
560
E
O
HOH
1_555
81.6
A
ASN
72
A
O
ASN
54
1_555
A
CA
247
B
CA
CA
1_555
A
HOH
560
E
O
HOH
1_555
86.7
A
VAL
75
A
O
VAL
57
1_555
A
CA
247
B
CA
CA
1_555
A
HOH
560
E
O
HOH
1_555
105.2
A
GLU
80
A
OE2
GLU
62
1_555
A
CA
247
B
CA
CA
1_555
A
HOH
560
E
O
HOH
1_555
69.0
A
HOH
248
E
O
HOH
1_555
A
CA
247
B
CA
CA
1_555
A
HOH
560
E
O
HOH
1_555
152.8
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
TYR
20
A
N
TYR
5
A
O
CYS
157
A
O
CYS
137
A
O
ALA
160
A
O
ALA
140
A
N
CYS
136
A
N
CYS
116
A
N
LEU
137
A
N
LEU
117
A
O
VAL
200
A
O
VAL
182
A
N
CYS
201
A
N
CYS
183
A
O
LYS
204
A
O
LYS
186
A
N
TRP
215
A
N
TRP
193
A
O
VAL
227
A
O
VAL
205
A
O
TYR
228
A
O
TYR
206
A
N
PHE
181
A
N
PHE
161
A
N
LEU
33
A
N
LEU
18
A
O
CYS
42
A
O
CYS
25
A
N
SER
45
A
N
SER
28
A
O
VAL
53
A
O
VAL
36
A
N
SER
54
A
N
SER
37
A
O
MET
104
A
O
MET
86
A
O
LEU
105
A
O
LEU
87
A
N
ILE
89
A
N
ILE
71
A
O
ILE
83
A
O
ILE
65
A
N
VAL
65
A
N
VAL
48
A
O
GLN
64
A
O
GLN
47
A
N
ASN
34
A
N
ASN
19
1
A
A
HG
O6'
SER
607
195
246
1.29
A
A
1
A
A
O
H2
GLN
HOH
221
650
1.50
1
A
A
O
H2
ALA
HOH
111
468
1.52
1
A
A
OG1
H2
THR
HOH
241
321
1.53
1
A
A
HG
O6'
SER
607
195
246
1.54
B
1
A
A
O
H2
TYR
HOH
172
718
1.55
1
A
A
O
H1
GLY
HOH
203
351
1.55
1
A
A
OD1
H1
ASN
HOH
101
548
1.55
1
A
A
O
H1
HOH
HOH
381
560
1.56
1
A
A
OG
H2
SER
HOH
93
360
1.57
1
A
A
OG
H2
SER
HOH
166
378
1.57
1
A
A
OH
H1
TYR
HOH
228
281
1.57
1
A
A
OG
H1
SER
HOH
236
642
1.58
B
1
A
A
O
H1
GLY
HOH
18
291
1.58
1
A
A
OD1
H2
ASN
HOH
25
272
1.59
1
A
A
OG
O6'
SER
607
195
246
2.19
A
1
A
ARG
117
0.269
SIDE CHAIN
1
-6.92
1.00
110.10
103.18
A
A
A
CG
CD1
NE1
TRP
TRP
TRP
51
51
51
N
1
7.55
0.90
109.00
116.55
A
A
A
CD1
NE1
CE2
TRP
TRP
TRP
51
51
51
N
1
-6.67
1.00
110.10
103.43
A
A
A
CG
CD1
NE1
TRP
TRP
TRP
141
141
141
N
1
7.49
0.90
109.00
116.49
A
A
A
CD1
NE1
CE2
TRP
TRP
TRP
141
141
141
N
1
7.17
1.10
114.20
121.37
A
A
A
CA
CB
SG
CYS
CYS
CYS
182
182
182
N
1
-17.48
2.70
111.00
93.52
A
A
A
N
CA
C
VAL
VAL
VAL
199
199
199
N
1
-6.27
1.00
110.10
103.83
A
A
A
CG
CD1
NE1
TRP
TRP
TRP
215
215
215
N
1
7.95
0.90
109.00
116.95
A
A
A
CD1
NE1
CE2
TRP
TRP
TRP
215
215
215
N
1
8.45
1.10
130.40
138.85
A
A
A
NE1
CE2
CZ2
TRP
TRP
TRP
215
215
215
N
1
-6.60
1.00
107.30
100.70
A
A
A
NE1
CE2
CD2
TRP
TRP
TRP
215
215
215
N
1
-6.49
1.00
110.10
103.61
A
A
A
CG
CD1
NE1
TRP
TRP
TRP
237
237
237
N
1
8.71
0.90
109.00
117.71
A
A
A
CD1
NE1
CE2
TRP
TRP
TRP
237
237
237
N
1
8.61
1.10
130.40
139.01
A
A
A
NE1
CE2
CZ2
TRP
TRP
TRP
237
237
237
N
1
-6.60
1.00
107.30
100.70
A
A
A
NE1
CE2
CD2
TRP
TRP
TRP
237
237
237
N
1
A
A
NE2
CD2
HIS
HIS
40
40
-0.076
0.011
1.373
1.297
N
1
A
A
NE2
CD2
HIS
HIS
91
91
-0.083
0.011
1.373
1.290
N
1
A
A
H1
O
HOH
HOH
248
382
1.57
1_555
4_556
1
A
A
O
H1
GLY
HOH
62
547
1.59
1_555
2_655
1
A
ASP
71
-137.98
-81.62
1
A
ASN
79
88.32
-8.16
1
A
ASN
115
-158.42
-156.58
1
A
ASN
223
58.06
6.57
Residues simultaneously refined in two or more conformations are:
Val53, Leu66, Ser86, Lys87, Se113, Ser130, Lys159, Asp165,
Ser170, Gln175, Ser195, Lys230, Ser236.
HOH384 makes short H-bonds with OgSer195 (Conformation 2) and O6' of the inhibitor
HOH383 makes short H-bonds with OgSer195 (Conformation 1) and O6' of the inhibitor
His40 and HIS91 are MONOPROTONATED ON THE EPSILON NITROGEN.
His57 is doubly protonated.
0.216
0.188
0.191
1.70
7.0
2101
30747
20567
10
66.9
1
THROUGHOUT
1.50
FOURIER SYNTHESIS
X-PLOR force field
1.70
7.0
435
3835
55
0
3345
0.018
3.8
1.70
37.58
1O36
31350
21642
0.70
0.091
1
7.3
1.8
69.0
0.249
1.70
1.78
1.14
3975
39.3
data collection
bioteX
1.2
data reduction
bioteX
1.2
refinement
X-PLOR
3.851
data scaling
bioteX
model building
Quanta
Elaborate Manifold of Short Hydrogen Bond Arrays Mediating Binding of Active Site-Directed Serine Protease Inhibitors
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
A
ALA
55
A
ALA
38
HELX_P
A
TYR
59
A
TYR
42
5
1
5
A
SER
164
A
SER
144
HELX_P
A
TYR
172
A
TYR
152
1
2
9
A
TYR
234
A
TYR
212
HELX_P
A
SER
244
A
SER
222
1
3
11
disulf
2.031
A
CYS
22
A
SG
CYS
7
1_555
A
CYS
157
A
SG
CYS
137
1_555
disulf
1.998
A
CYS
42
A
SG
CYS
25
1_555
A
CYS
58
A
SG
CYS
41
1_555
disulf
2.006
A
CYS
128
A
SG
CYS
109
1_555
A
CYS
232
A
SG
CYS
210
1_555
disulf
1.990
A
CYS
136
A
SG
CYS
116
1_555
A
CYS
201
A
SG
CYS
183
1_555
disulf
2.005
A
CYS
168
A
SG
CYS
148
1_555
A
CYS
182
A
SG
CYS
162
1_555
disulf
2.014
A
CYS
191
A
SG
CYS
173
1_555
A
CYS
220
A
SG
CYS
197
1_555
metalc
2.382
A
GLU
70
A
OE2
GLU
52
1_555
A
CA
247
B
CA
CA
1_555
metalc
2.168
A
ASN
72
A
O
ASN
54
1_555
A
CA
247
B
CA
CA
1_555
metalc
2.154
A
VAL
75
A
O
VAL
57
1_555
A
CA
247
B
CA
CA
1_555
metalc
2.546
A
GLU
80
A
OE2
GLU
62
1_555
A
CA
247
B
CA
CA
1_555
metalc
2.285
A
CA
247
B
CA
CA
1_555
A
HOH
248
E
O
HOH
1_555
metalc
2.323
A
CA
247
B
CA
CA
1_555
A
HOH
560
E
O
HOH
1_555
HYDROLASE
serine protease, short hydrogen bond, inhibition mechanism, shift of pKa, trypsin, thrombin, urokinase, factor Xa, hydrolase
TRY1_BOVIN
UNP
1
21
P00760
IVGGYTCGANTVPYQVSLNSGYHFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNT
LNNDIMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNM
FCAGYLEGGKDSCQGDSGGPVVCSGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIASN
21
243
1O36
16
245
P00760
A
1
1
223
7
7
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
TYR
20
A
TYR
5
A
THR
21
A
THR
6
A
LYS
156
A
LYS
136
A
PRO
161
A
PRO
141
A
GLN
135
A
GLN
115
A
GLY
140
A
GLY
120
A
PRO
198
A
PRO
180
A
CYS
201
A
CYS
183
A
LYS
204
A
LYS
186
A
TRP
215
A
TRP
193
A
GLY
226
A
GLY
204
A
LYS
230
A
LYS
208
A
MET
180
A
MET
160
A
ALA
183
A
ALA
163
A
GLN
30
A
GLN
15
A
ASN
34
A
ASN
19
A
HIS
40
A
HIS
23
A
ASN
48
A
ASN
31
A
TRP
51
A
TRP
34
A
SER
54
A
SER
37
A
MET
104
A
MET
86
A
LEU
108
A
LEU
90
A
GLN
81
A
GLN
63
A
VAL
90
A
VAL
72
A
GLN
64
A
GLN
47
A
LEU
66
A
LEU
50
A
GLN
30
A
GLN
15
A
ASN
34
A
ASN
19
BINDING SITE FOR RESIDUE CA A 247
A
CA
247
Software
6
BINDING SITE FOR RESIDUE CL A 260
A
CL
260
Software
1
BINDING SITE FOR RESIDUE 607 A 246
A
607
246
Software
14
A
GLU
70
A
GLU
52
6
1_555
A
ASN
72
A
ASN
54
6
1_555
A
VAL
75
A
VAL
57
6
1_555
A
GLU
80
A
GLU
62
6
1_555
A
HOH
248
E
HOH
6
1_555
A
HOH
560
E
HOH
6
1_555
A
GLY
174
A
GLY
154
1
1_555
A
PHE
41
A
PHE
24
14
1_555
A
CYS
42
A
CYS
25
14
1_555
A
HIS
57
A
HIS
40
14
1_555
A
ASP
189
A
ASP
171
14
1_555
A
SER
190
A
SER
172
14
1_555
A
GLN
192
A
GLN
174
14
1_555
A
SER
195
A
SER
177
14
1_555
A
VAL
213
A
VAL
191
14
1_555
A
TRP
215
A
TRP
193
14
1_555
A
GLY
219
A
GLY
196
14
1_555
A
CYS
220
A
CYS
197
14
1_555
A
GLY
226
A
GLY
204
14
1_555
A
HOH
383
E
HOH
14
1_555
A
HOH
384
E
HOH
14
1_555
19
orthorhombic
P 21 21 21