1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Wang, G. Keifer, P.A. Peterkofsky, A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N C N 7 N O N 8 N O N 9 N O N 10 N H N 11 N H N 12 N H N 13 N H N 14 N H N 15 N H N 16 N H N 17 N N N 18 N C N 19 N C N 20 N O N 21 N O N 22 N H N 23 N H N 24 N H N 25 N H N 26 N H N 27 N N N 28 S C N 29 N C N 30 N O N 31 N C N 32 N C N 33 N C N 34 N C N 35 N O N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N N N 50 S C N 51 N C N 52 N O N 53 N C N 54 N C N 55 N C N 56 N C N 57 N N N 58 N O N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C Y 79 N C Y 80 N C Y 81 N C Y 82 N C Y 83 N C Y 84 N C N 85 N O N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N N N 98 S C N 99 N C N 100 N O N 101 N C N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N N N 112 S C N 113 N C N 114 N O N 115 N C N 116 N C N 117 N C N 118 N O N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N doub N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N doub N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N doub N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N doub N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing Y 81 N doub Y 82 N sing Y 83 N sing N 84 N sing Y 85 N doub N 86 N sing Y 87 N doub N 88 N sing Y 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N doub N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N doub N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing US Protein Sci. PRCIEI 0795 0961-8368 12 1087 1096 10.1110/ps.0301503 12717030 Solution structure of the N-terminal amphitropic domain of Escherichia coli glucose-specific enzyme IIA in membrane-mimetic micelles 2003 10.2210/pdb1o53/pdb pdb_00001o53 1696.983 PTS system, glucose-specific IIA component 2.7.1.69 N-terminal membrane anchor, residues 1-15 of enzyme IIA(Glucose) 1 syn polymer EIIA-GLC, Glucose-permease IIA component, Phosphotransferase enzyme II, A component, EIII-GLC no no GLFDKLKSLVSDDKK GLFDKLKSLVSDDKK A polypeptide(L) n n n n n n n n n n n n n n n database_2 pdbx_struct_assembly pdbx_struct_oper_list chem_comp_atom chem_comp_bond repository Initial release Version format compliance Version format compliance Database references Derived calculations Data collection 1 0 2003-08-19 1 1 2008-04-26 1 2 2011-07-13 1 3 2022-02-23 1 4 2023-12-27 _database_2.pdbx_DOI _database_2.pdbx_database_accession 2003-08-19 SPRSDE HPr-IIA complex x-ray structure of IIA RCSB Y RCSB 2003-08-11 REL The peptide was synthesized using the solid-phase method and purified by HPLC. The sequence of the peptide is naturally found in Escherichia coli (bacteria). sample This structure was determined using standard 2D homonuclear NMR techniques. No NOE violations greater than 0.20 A; rms difference for bond deviations from ideality less than 0.01 A; rms difference for angle deviations from ideality less than 2 degrees; Structures with the lowerest energies in the ensemble; Structures most resemble the average structure. 100 20 2D NOESY, TOCSY, DQF-COSY no buffer 5.4 ambient 298 K The structures are based on 146 distances derived from the NOESY spectra. No dihedral angles or hydrogen-bond restraints were applied. simulated annealing 1 most resemble the average structure. natural abundance synthetic peptide 5 mM peptide and 50 mM dihexanoyl phosphatidylglycerol 90% H2O and 10% D2O Delaglio, F. data processing NMRPipe/nmrDraw 2.1 Garrett, D. noe picking PIPP 1.0 Schwieters, C.D., Kuszewski, J., Tjandra, N, Clore, G.M. structural calculations XPLOR-NIH 1.06 Koradi, R. structural analysis and viewing MOLMOL 2K.1 600 Varian INOVA GLY 1 n 1 GLY 1 A LEU 2 n 2 LEU 2 A PHE 3 n 3 PHE 3 A ASP 4 n 4 ASP 4 A LYS 5 n 5 LYS 5 A LEU 6 n 6 LEU 6 A LYS 7 n 7 LYS 7 A SER 8 n 8 SER 8 A LEU 9 n 9 LEU 9 A VAL 10 n 10 VAL 10 A SER 11 n 11 SER 11 A ASP 12 n 12 ASP 12 A ASP 13 n 13 ASP 13 A LYS 14 n 14 LYS 14 A LYS 15 n 15 LYS 15 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A A H2 H GLY LEU 1 2 1.32 1 A A O H PHE LYS 3 7 1.45 2 A A O H PHE LYS 3 7 1.49 3 A A O H PHE LYS 3 7 1.45 4 A A O H LEU LYS 2 5 1.45 4 A A O H PHE LYS 3 7 1.46 4 A A O H PHE LEU 3 6 1.56 5 A A O H PHE LYS 3 7 1.45 5 A A O H LEU LYS 2 5 1.47 5 A A O H PHE LEU 3 6 1.57 6 A A O H PHE LYS 3 7 1.43 7 A A O H PHE LYS 3 7 1.48 8 A A O H PHE LYS 3 7 1.42 9 A A O H PHE LYS 3 7 1.41 10 A A O H PHE LYS 3 7 1.41 11 A A O H PHE LYS 3 7 1.59 12 A A O H PHE LYS 3 7 1.32 13 A A O H PHE LYS 3 7 1.39 13 A A OD1 H ASP LYS 13 14 1.50 14 A A O H PHE LYS 3 7 1.48 15 A A O H PHE LYS 3 7 1.49 16 A A O H PHE LYS 3 7 1.50 17 A A O H PHE LYS 3 7 1.36 18 A A O H PHE LYS 3 7 1.42 19 A A O H PHE LYS 3 7 1.41 20 A A O H PHE LYS 3 7 1.33 20 A A O H LEU LYS 2 5 1.41 1 A LEU 2 -154.99 -86.51 1 A ASP 12 -174.25 -92.65 1 A ASP 13 60.39 -2.01 1 A LYS 14 -172.69 101.33 2 A LEU 2 -75.73 -96.87 2 A ASP 13 -78.29 34.91 2 A LYS 14 37.20 -107.30 3 A LEU 2 -159.80 -78.94 3 A ASP 12 -153.72 71.31 3 A LYS 14 31.01 90.52 4 A LEU 2 -137.99 -97.68 4 A PHE 3 -21.46 -47.01 4 A ASP 4 -39.85 -36.85 4 A ASP 12 -97.35 -92.12 4 A LYS 14 58.59 148.33 5 A LEU 2 -137.31 -98.11 5 A PHE 3 -20.67 -47.43 5 A SER 11 -89.94 31.27 5 A ASP 13 -95.39 -103.91 6 A LEU 2 -88.86 -88.32 6 A SER 11 -89.37 48.61 6 A ASP 12 -172.27 20.92 7 A LEU 2 -164.12 -87.81 7 A SER 11 -66.17 3.97 7 A ASP 13 -78.97 46.09 8 A LEU 2 -109.48 -90.36 8 A LYS 14 57.88 -78.38 9 A LEU 2 -172.32 -85.90 9 A ASP 12 -158.57 16.25 10 A LEU 2 -82.66 -86.00 10 A LYS 14 -102.99 52.97 11 A LEU 2 -82.42 -84.92 12 A LEU 2 -162.20 -87.07 12 A SER 11 -82.94 40.86 12 A ASP 12 -146.22 -5.54 12 A ASP 13 -167.22 87.32 12 A LYS 14 -48.99 167.26 13 A LEU 2 -141.16 -91.45 13 A SER 11 -90.53 30.93 13 A ASP 12 -161.63 33.17 13 A ASP 13 -56.85 -95.50 14 A LEU 2 -90.79 -83.69 14 A SER 11 -67.34 4.98 15 A LEU 2 -95.38 -84.56 15 A ASP 12 -170.82 24.85 15 A ASP 13 -157.83 -36.42 16 A LEU 2 -92.63 -87.45 16 A SER 11 -81.43 30.01 16 A ASP 12 -157.10 -20.48 16 A ASP 13 -176.73 99.05 17 A LEU 2 -160.35 -88.01 17 A SER 11 -107.74 56.00 17 A ASP 12 -159.16 -26.98 17 A LYS 14 45.66 25.67 18 A LEU 2 -105.37 -86.31 18 A SER 11 -73.18 45.59 18 A ASP 12 -159.95 -2.48 18 A ASP 13 -72.22 -99.36 18 A LYS 14 -178.88 143.29 19 A LEU 2 -81.79 -88.13 19 A SER 11 -105.97 50.82 19 A ASP 12 -163.62 35.83 20 A LEU 2 -85.42 -87.22 20 A SER 11 -73.70 36.15 20 A ASP 12 -156.14 -43.59 20 A ASP 13 47.59 87.76 20 A LYS 14 -146.34 -114.25 Solution structure of the N-terminal membrane anchor of E. coli enzyme IIA(Glucose) 1 N N A LEU 2 A LEU 2 HELX_P A SER 11 A SER 11 1 1 10 TRANSFERASE amphipathic helix, TRANSFERASE PTGA_ECOLI UNP 1 1 P08837 GLFDKLKSLVSDDKK 1 15 1O53 1 15 P08837 A 1 1 15 1 P 1