1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Wiesner, S.
Stier, G.
Sattler, M.
Macias, M.J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
324
807
10.1016/S0022-2836(02)01145-2
12460579
Solution Structure and Ligand Recognition of the Ww Domain Pair of the Yeast Splicing Factor Prp40
2002
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
WW DOMAIN PAIR OF SC. PRE-MRNA PROCESSING PROTEIN (PRP) 40
8897.083
PRE-MRNA PROCESSING PROTEIN PRP40
WW DOMAIN PAIR, RESIDUES 1-75
1
man
polymer
PRP40
no
no
MSIWKEAKDASGRIYYYNTLTKKSTWEKPKELISQEELLLRENGWKAAKTADGKVYYYNPTTRETSWTIPAFEKK
MSIWKEAKDASGRIYYYNTLTKKSTWEKPKELISQEELLLRENGWKAAKTADGKVYYYNPTTRETSWTIPAFEKK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
BAKER'S YEAST
sample
N-TERMINAL HIS6-TAG AND TEV CLEAVAGE SITE
4932
SACCHAROMYCES CEREVISIAE
469008
ESCHERICHIA COLI
BL21(DE3)
PET24D
pdbx_database_status
pdbx_nmr_software
repository
Initial release
Version format compliance
Version format compliance
Data collection
Other
1
0
2002-12-04
1
1
2011-05-08
1
2
2011-07-13
1
3
2020-01-15
_pdbx_database_status.status_code_cs
_pdbx_nmr_software.name
HELIX
DETERMINATION METHOD: AUTHOR PROVIDED.
SHEET
DETERMINATION METHOD: AUTHOR PROVIDED.
PDBE
Y
PDBE
2002-10-16
REL
REL
REQUIRED FOR THE FIRST STEP OF PRE-MRNA SPLICING. THIS
PROTEIN IS ASSOCIATED WITH SNRNP U1.
THE STRUCTURE WAS DETERMINED USING STANDARD TRIPLE-RESONANCE NMR SPECTROSCOPY ON 13C,15N-LABELED PRP40 1-75. RESIDUAL DIPOLAR COUPLINGS WERE MEASURED TO INCREASE THE CONVERGENCE OF THE SET OF STUCTURES CALCULATED.
STRUCTURES WITH ACCEPTABLE COVALEN GEOMETRY, STRUCTURES WITH FAVORABL NON-BOND ENERGY
20
7
13C-NOESY
15N-NOESY
S3CT
HNCG
HNHA-J
20MM NA PHOSPHATE, 30MM NACL
6.3
pH
1
atm
295
K
REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE.
AMBIGUOUS DISTANCE RESTRAINTS SIMULATED ANNEALING WIT TORSION ANGLE DYNAMICS AS IMPLEMENTED IN ARIA1.0
1
1.5 MM 15N- OR 13C,15N
20MM PHOSPHATE BUFFER PH 6.3
30MM NACL
0.03% (W/V) NAN3
NILGES, M.
refinement
ARIA
structure solution
XEASY
structure solution
NMRView
structure solution
PIPP/ CAPP
CAPP
structure solution
ARIA
structure solution
CNS
500
Bruker
DRX
600
Bruker
DRX
MET
1
n
1
MET
1
A
SER
2
n
2
SER
2
A
ILE
3
n
3
ILE
3
A
TRP
4
n
4
TRP
4
A
LYS
5
n
5
LYS
5
A
GLU
6
n
6
GLU
6
A
ALA
7
n
7
ALA
7
A
LYS
8
n
8
LYS
8
A
ASP
9
n
9
ASP
9
A
ALA
10
n
10
ALA
10
A
SER
11
n
11
SER
11
A
GLY
12
n
12
GLY
12
A
ARG
13
n
13
ARG
13
A
ILE
14
n
14
ILE
14
A
TYR
15
n
15
TYR
15
A
TYR
16
n
16
TYR
16
A
TYR
17
n
17
TYR
17
A
ASN
18
n
18
ASN
18
A
THR
19
n
19
THR
19
A
LEU
20
n
20
LEU
20
A
THR
21
n
21
THR
21
A
LYS
22
n
22
LYS
22
A
LYS
23
n
23
LYS
23
A
SER
24
n
24
SER
24
A
THR
25
n
25
THR
25
A
TRP
26
n
26
TRP
26
A
GLU
27
n
27
GLU
27
A
LYS
28
n
28
LYS
28
A
PRO
29
n
29
PRO
29
A
LYS
30
n
30
LYS
30
A
GLU
31
n
31
GLU
31
A
LEU
32
n
32
LEU
32
A
ILE
33
n
33
ILE
33
A
SER
34
n
34
SER
34
A
GLN
35
n
35
GLN
35
A
GLU
36
n
36
GLU
36
A
GLU
37
n
37
GLU
37
A
LEU
38
n
38
LEU
38
A
LEU
39
n
39
LEU
39
A
LEU
40
n
40
LEU
40
A
ARG
41
n
41
ARG
41
A
GLU
42
n
42
GLU
42
A
ASN
43
n
43
ASN
43
A
GLY
44
n
44
GLY
44
A
TRP
45
n
45
TRP
45
A
LYS
46
n
46
LYS
46
A
ALA
47
n
47
ALA
47
A
ALA
48
n
48
ALA
48
A
LYS
49
n
49
LYS
49
A
THR
50
n
50
THR
50
A
ALA
51
n
51
ALA
51
A
ASP
52
n
52
ASP
52
A
GLY
53
n
53
GLY
53
A
LYS
54
n
54
LYS
54
A
VAL
55
n
55
VAL
55
A
TYR
56
n
56
TYR
56
A
TYR
57
n
57
TYR
57
A
TYR
58
n
58
TYR
58
A
ASN
59
n
59
ASN
59
A
PRO
60
n
60
PRO
60
A
THR
61
n
61
THR
61
A
THR
62
n
62
THR
62
A
ARG
63
n
63
ARG
63
A
GLU
64
n
64
GLU
64
A
THR
65
n
65
THR
65
A
SER
66
n
66
SER
66
A
TRP
67
n
67
TRP
67
A
THR
68
n
68
THR
68
A
ILE
69
n
69
ILE
69
A
PRO
70
n
70
PRO
70
A
ALA
71
n
71
ALA
71
A
PHE
72
n
72
PHE
72
A
GLU
73
n
73
GLU
73
A
LYS
74
n
74
LYS
74
A
LYS
75
n
75
LYS
75
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ALA
7
A
N
ALA
7
A
O
TYR
15
A
O
TYR
15
A
N
ASN
18
A
N
ASN
18
A
O
LYS
23
A
O
LYS
23
A
N
ALA
48
A
N
ALA
48
A
O
TYR
56
A
O
TYR
56
A
N
ASN
59
A
N
ASN
59
A
O
GLU
64
A
O
GLU
64
1
A
SER
2
-158.61
65.88
1
A
LYS
74
-56.91
105.12
2
A
SER
2
-124.61
-103.45
2
A
GLU
42
-46.22
-19.23
3
A
THR
65
-163.33
116.33
3
A
PRO
70
-55.49
172.05
4
A
ASP
9
-65.86
-179.29
4
A
THR
65
-163.80
115.93
4
A
PRO
70
-54.94
171.95
5
A
SER
2
-151.51
-127.94
5
A
ILE
69
-55.86
105.67
6
A
GLU
42
-45.95
-19.72
7
A
SER
2
-97.32
55.01
7
A
LYS
28
-55.85
106.56
7
A
LYS
74
-158.06
45.11
PRE-MRNA PROCESSING PROTEIN PRP40
Solution Structure of the Prp40 WW Domain Pair of the Yeast Splicing Factor Prp40
1
N
N
A
LYS
30
A
LYS
30
HELX_P
A
GLU
42
A
GLU
42
1
1
13
NUCLEAR PROTEIN
WW DOMAIN PAIR, NUCLEAR PROTEIN, MRNA PROCESSING, PRP40, MRNA SPLICING, RIBONUCLEOPROTEIN
PR40_YEAST
UNP
1
P33203
1
75
1O6W
1
75
P33203
A
1
1
75
3
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
TRP
4
A
TRP
4
A
ASP
9
A
ASP
9
A
ARG
13
A
ARG
13
A
THR
19
A
THR
19
A
LYS
22
A
LYS
22
A
TRP
26
A
TRP
26
A
TRP
45
A
TRP
45
A
THR
50
A
THR
50
A
LYS
54
A
LYS
54
A
PRO
60
A
PRO
60
A
ARG
63
A
ARG
63
A
TRP
67
A
TRP
67
1
P 1