0.032680
0.000000
0.001959
0.000000
0.031786
0.000000
0.000000
0.000000
0.017597
0.00000
0.00000
0.00000
Gabrielsen, M.
Alphey, M.S.
Bond, C.S.
Hunter, W.N.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.00
93.43
90.00
30.600
31.460
56.930
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
278
25919
10.1074/JBC.M301526200
12707277
Tryparedoxins from Crithidia Fasciculata and Trypanosoma Brucei: Photoreduction of the Redox Disulfide Using Synchrotron Radiation and Evidence for a Conformational Switch Implicated in Function
2003
10.2210/pdb1o73/pdb
pdb_00001o73
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.0
1
ROTATING ANODE
IMAGE PLATE
RIGAKU IMAGE PLATE
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
15904.936
TRYPAREDOXIN
1
man
polymer
18.015
water
63
nat
water
no
no
MSGLAKYLPGATNLLSKSGEVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDY
YGKMPWLALPFDQRSTVSELGKTFGVESIPTLITINADTGAIIGTQARTRVIEDPDGANFPWPN
MSGLAKYLPGATNLLSKSGEVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDY
YGKMPWLALPFDQRSTVSELGKTFGVESIPTLITINADTGAIIGTQARTRVIEDPDGANFPWPN
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
427
sample
5702
TRYPANOSOMA BRUCEI BRUCEI
511693
ESCHERICHIA COLI
BL21
PET-15B
1
2.5
50
4.60
50 MM HEPES PH 7.5, 30% PEG4000, 100 MM SODIUM ACETATE PH 4.6, 200 MM AMMONIUM ACETATE
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Other
Refinement description
1
0
2003-04-24
1
1
2011-05-08
1
2
2011-07-13
1
3
2023-12-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_sf
STRUCTURE OF TRYPAREDOXIN II
TRYPAREDOXIN II COMPLEXED WITH GLUTATHIONYLSPERMIDINE
TRYPAREDOXIN II FROM C.FASCICULATA SOLVED BY SULPHUR PHASING
TRYPAREDOXIN II FROM C.FASCICULATA SOLVED BY SULPHUR PHASING
TRYPAREDOXIN II FROM C.FASCICULATA SOLVED BY MR
TRYPAREDOXIN II FROM C.FASCICULATA SOLVED BY MR
CRYSTAL STRUCTURE OF NATIVE TRYPAREDOXIN I FROM CRITHIDIA FASCICULATA
CRYSTAL STRUCTURE OF RECOMBINANT TRYPAREDOXIN I
RADIATION DAMAGED TRYPAREDOXIN-I
RADIATION-REDUCED TRYPAREDOXIN-I
RADIATION-REDUCED TRYPARDOXIN-I
MUTANT TRYPAREDOXIN-I CYS43ALA
PDBE
Y
PDBE
2002-10-23
REL
REL
HOH
water
THIS PROTEIN PARTICIPATES IN VARIOUS REDOX REACTIONS
BY THE REVERSIBLE OXIDATION OF ITS ACTIVE CENTER DITHIOL
TO A DISULFIDE. IT ALSO CATALYZES DITHIOL-DISULFIDE
EXCHANGE REACTIONS.
1QK8
PDB ENTRY 1QK8
PDB
experimental model
HOH
2001
2
HOH
HOH
2001
A
HOH
2002
2
HOH
HOH
2002
A
HOH
2003
2
HOH
HOH
2003
A
HOH
2004
2
HOH
HOH
2004
A
HOH
2005
2
HOH
HOH
2005
A
HOH
2006
2
HOH
HOH
2006
A
HOH
2007
2
HOH
HOH
2007
A
HOH
2008
2
HOH
HOH
2008
A
HOH
2009
2
HOH
HOH
2009
A
HOH
2010
2
HOH
HOH
2010
A
HOH
2011
2
HOH
HOH
2011
A
HOH
2012
2
HOH
HOH
2012
A
HOH
2013
2
HOH
HOH
2013
A
HOH
2014
2
HOH
HOH
2014
A
HOH
2015
2
HOH
HOH
2015
A
HOH
2016
2
HOH
HOH
2016
A
HOH
2017
2
HOH
HOH
2017
A
HOH
2018
2
HOH
HOH
2018
A
HOH
2019
2
HOH
HOH
2019
A
HOH
2020
2
HOH
HOH
2020
A
HOH
2021
2
HOH
HOH
2021
A
HOH
2022
2
HOH
HOH
2022
A
HOH
2023
2
HOH
HOH
2023
A
HOH
2024
2
HOH
HOH
2024
A
HOH
2025
2
HOH
HOH
2025
A
HOH
2026
2
HOH
HOH
2026
A
HOH
2027
2
HOH
HOH
2027
A
HOH
2028
2
HOH
HOH
2028
A
HOH
2029
2
HOH
HOH
2029
A
HOH
2030
2
HOH
HOH
2030
A
HOH
2031
2
HOH
HOH
2031
A
HOH
2032
2
HOH
HOH
2032
A
HOH
2033
2
HOH
HOH
2033
A
HOH
2034
2
HOH
HOH
2034
A
HOH
2035
2
HOH
HOH
2035
A
HOH
2036
2
HOH
HOH
2036
A
HOH
2037
2
HOH
HOH
2037
A
HOH
2038
2
HOH
HOH
2038
A
HOH
2039
2
HOH
HOH
2039
A
HOH
2040
2
HOH
HOH
2040
A
HOH
2041
2
HOH
HOH
2041
A
HOH
2042
2
HOH
HOH
2042
A
HOH
2043
2
HOH
HOH
2043
A
HOH
2044
2
HOH
HOH
2044
A
HOH
2045
2
HOH
HOH
2045
A
HOH
2046
2
HOH
HOH
2046
A
HOH
2047
2
HOH
HOH
2047
A
HOH
2048
2
HOH
HOH
2048
A
HOH
2049
2
HOH
HOH
2049
A
HOH
2050
2
HOH
HOH
2050
A
HOH
2051
2
HOH
HOH
2051
A
HOH
2052
2
HOH
HOH
2052
A
HOH
2053
2
HOH
HOH
2053
A
HOH
2054
2
HOH
HOH
2054
A
HOH
2055
2
HOH
HOH
2055
A
HOH
2056
2
HOH
HOH
2056
A
HOH
2057
2
HOH
HOH
2057
A
HOH
2058
2
HOH
HOH
2058
A
HOH
2059
2
HOH
HOH
2059
A
HOH
2060
2
HOH
HOH
2060
A
HOH
2061
2
HOH
HOH
2061
A
HOH
2062
2
HOH
HOH
2062
A
HOH
2063
2
HOH
HOH
2063
A
MET
1
n
1
MET
1
A
SER
2
n
2
SER
2
A
GLY
3
n
3
GLY
3
A
LEU
4
n
4
LEU
4
A
ALA
5
n
5
ALA
5
A
LYS
6
n
6
LYS
6
A
TYR
7
n
7
TYR
7
A
LEU
8
n
8
LEU
8
A
PRO
9
n
9
PRO
9
A
GLY
10
n
10
GLY
10
A
ALA
11
n
11
ALA
11
A
THR
12
n
12
THR
12
A
ASN
13
n
13
ASN
13
A
LEU
14
n
14
LEU
14
A
LEU
15
n
15
LEU
15
A
SER
16
n
16
SER
16
A
LYS
17
n
17
LYS
17
A
SER
18
n
18
SER
18
A
GLY
19
n
19
GLY
19
A
GLU
20
n
20
GLU
20
A
VAL
21
n
21
VAL
21
A
SER
22
n
22
SER
22
A
LEU
23
n
23
LEU
23
A
GLY
24
n
24
GLY
24
A
SER
25
n
25
SER
25
A
LEU
26
n
26
LEU
26
A
VAL
27
n
27
VAL
27
A
GLY
28
n
28
GLY
28
A
LYS
29
n
29
LYS
29
A
THR
30
n
30
THR
30
A
VAL
31
n
31
VAL
31
A
PHE
32
n
32
PHE
32
A
LEU
33
n
33
LEU
33
A
TYR
34
n
34
TYR
34
A
PHE
35
n
35
PHE
35
A
SER
36
n
36
SER
36
A
ALA
37
n
37
ALA
37
A
SER
38
n
38
SER
38
A
TRP
39
n
39
TRP
39
A
CYS
40
n
40
CYS
40
A
PRO
41
n
41
PRO
41
A
PRO
42
n
42
PRO
42
A
CYS
43
n
43
CYS
43
A
ARG
44
n
44
ARG
44
A
GLY
45
n
45
GLY
45
A
PHE
46
n
46
PHE
46
A
THR
47
n
47
THR
47
A
PRO
48
n
48
PRO
48
A
VAL
49
n
49
VAL
49
A
LEU
50
n
50
LEU
50
A
ALA
51
n
51
ALA
51
A
GLU
52
n
52
GLU
52
A
PHE
53
n
53
PHE
53
A
TYR
54
n
54
TYR
54
A
GLU
55
n
55
GLU
55
A
LYS
56
n
56
LYS
56
A
HIS
57
n
57
HIS
57
A
HIS
58
n
58
HIS
58
A
VAL
59
n
59
VAL
59
A
ALA
60
n
60
ALA
60
A
LYS
61
n
61
LYS
61
A
ASN
62
n
62
ASN
62
A
PHE
63
n
63
PHE
63
A
GLU
64
n
64
GLU
64
A
VAL
65
n
65
VAL
65
A
VAL
66
n
66
VAL
66
A
LEU
67
n
67
LEU
67
A
ILE
68
n
68
ILE
68
A
SER
69
n
69
SER
69
A
TRP
70
n
70
TRP
70
A
ASP
71
n
71
ASP
71
A
GLU
72
n
72
GLU
72
A
ASN
73
n
73
ASN
73
A
GLU
74
n
74
GLU
74
A
SER
75
n
75
SER
75
A
ASP
76
n
76
ASP
76
A
PHE
77
n
77
PHE
77
A
HIS
78
n
78
HIS
78
A
ASP
79
n
79
ASP
79
A
TYR
80
n
80
TYR
80
A
TYR
81
n
81
TYR
81
A
GLY
82
n
82
GLY
82
A
LYS
83
n
83
LYS
83
A
MET
84
n
84
MET
84
A
PRO
85
n
85
PRO
85
A
TRP
86
n
86
TRP
86
A
LEU
87
n
87
LEU
87
A
ALA
88
n
88
ALA
88
A
LEU
89
n
89
LEU
89
A
PRO
90
n
90
PRO
90
A
PHE
91
n
91
PHE
91
A
ASP
92
n
92
ASP
92
A
GLN
93
n
93
GLN
93
A
ARG
94
n
94
ARG
94
A
SER
95
n
95
SER
95
A
THR
96
n
96
THR
96
A
VAL
97
n
97
VAL
97
A
SER
98
n
98
SER
98
A
GLU
99
n
99
GLU
99
A
LEU
100
n
100
LEU
100
A
GLY
101
n
101
GLY
101
A
LYS
102
n
102
LYS
102
A
THR
103
n
103
THR
103
A
PHE
104
n
104
PHE
104
A
GLY
105
n
105
GLY
105
A
VAL
106
n
106
VAL
106
A
GLU
107
n
107
GLU
107
A
SER
108
n
108
SER
108
A
ILE
109
n
109
ILE
109
A
PRO
110
n
110
PRO
110
A
THR
111
n
111
THR
111
A
LEU
112
n
112
LEU
112
A
ILE
113
n
113
ILE
113
A
THR
114
n
114
THR
114
A
ILE
115
n
115
ILE
115
A
ASN
116
n
116
ASN
116
A
ALA
117
n
117
ALA
117
A
ASP
118
n
118
ASP
118
A
THR
119
n
119
THR
119
A
GLY
120
n
120
GLY
120
A
ALA
121
n
121
ALA
121
A
ILE
122
n
122
ILE
122
A
ILE
123
n
123
ILE
123
A
GLY
124
n
124
GLY
124
A
THR
125
n
125
THR
125
A
GLN
126
n
126
GLN
126
A
ALA
127
n
127
ALA
127
A
ARG
128
n
128
ARG
128
A
THR
129
n
129
THR
129
A
ARG
130
n
130
ARG
130
A
VAL
131
n
131
VAL
131
A
ILE
132
n
132
ILE
132
A
GLU
133
n
133
GLU
133
A
ASP
134
n
134
ASP
134
A
PRO
135
n
135
PRO
135
A
ASP
136
n
136
ASP
136
A
GLY
137
n
137
GLY
137
A
ALA
138
n
138
ALA
138
A
ASN
139
n
139
ASN
139
A
PHE
140
n
140
PHE
140
A
PRO
141
n
141
PRO
141
A
TRP
142
n
142
TRP
142
A
PRO
143
n
143
PRO
143
A
ASN
144
n
144
ASN
144
A
author_and_software_defined_assembly
PQS
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LEU
87
A
N
LEU
87
A
O
VAL
65
A
O
VAL
65
A
N
GLU
64
A
N
GLU
64
A
O
THR
30
A
O
THR
30
A
N
PHE
35
A
N
PHE
35
A
O
THR
111
A
O
THR
111
A
O
THR
114
A
O
THR
114
A
N
ILE
123
A
N
ILE
123
1
A
TYR
7
-131.83
-46.18
1
A
TRP
86
-108.38
-156.07
26.62
1.28000
0.00000
0.45000
-0.95000
0.00000
-0.28000
0.944
0.902
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.244
0.177
2.28
56.80
229
4794
4.600
98.6
8.827
0.215
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.802
0.275
0.80
0.80
1.40
PDB ENTRY 1QK8
MAXIMUM LIKELIHOOD
BABINET MODEL PLUS MASK
2.28
56.80
63
1187
0
0
1124
0.049
0.021
1159
0.002
0.020
1018
3.040
1.945
1581
1.361
3.000
2376
0.207
0.200
172
0.020
0.020
1292
0.019
0.020
240
0.218
0.200
221
0.247
0.200
1097
0.110
0.200
647
0.217
0.200
16
0.146
0.200
14
0.328
0.200
39
0.085
0.200
3
1.824
1.500
718
2.854
2.000
1161
4.271
3.000
441
5.995
4.500
420
0.2470
0.2040
2.34
23
324
20
2.280
56.800
1O73
5030
2.000
0.07300
1
19.6000
8.100
98.7
0.21700
2.28
2.36
6.500
1
3.40
94.7
refinement
REFMAC
5.1.24
data reduction
DENZO
data scaling
SCALEPACK
phasing
AMoRE
Tryparedoxin from Trypanosoma brucei
1
N
N
2
N
N
A
SER
2
A
SER
2
HELX_P
A
TYR
7
A
TYR
7
5
1
6
A
LEU
23
A
LEU
23
HELX_P
A
VAL
27
A
VAL
27
5
2
5
A
CYS
40
A
CYS
40
HELX_P
A
HIS
58
A
HIS
58
1
3
19
A
ASN
73
A
ASN
73
HELX_P
A
GLY
82
A
GLY
82
1
4
10
A
GLN
93
A
GLN
93
HELX_P
A
GLY
105
A
GLY
105
1
5
13
A
GLN
126
A
GLN
126
HELX_P
A
ASP
134
A
ASP
134
1
6
9
disulf
2.029
A
CYS
40
A
SG
CYS
40
1_555
A
CYS
43
A
SG
CYS
43
1_555
ELECTRON TRANSPORT
ELECTRON TRANSPORT, TRYPAREDOXIN, TRYPANOSOMATID, TRYPANOSOMA BRUCEI, THIOREDOXIN
A
ILE
109
A
ILE
109
1
A
PRO
110
A
PRO
110
0.92
A
PHE
140
A
PHE
140
1
A
PRO
141
A
PRO
141
0.78
O77404
UNP
1
O77404
1
144
1O73
1
144
O77404
A
1
1
144
5
parallel
parallel
anti-parallel
anti-parallel
A
LEU
87
A
LEU
87
A
ALA
88
A
ALA
88
A
PHE
63
A
PHE
63
A
SER
69
A
SER
69
A
THR
30
A
THR
30
A
SER
36
A
SER
36
A
THR
111
A
THR
111
A
ASN
116
A
ASN
116
A
ILE
122
A
ILE
122
A
GLY
124
A
GLY
124
4
P 1 21 1