0.013732
0.000000
0.000000
0.000000
0.012335
0.000000
0.000000
0.000000
0.010442
0.00000
0.00000
0.00000
Herron, S.R.
Jurnak, F.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
72.820
81.070
95.770
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Ca 2
40.078
CALCIUM ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
278
12271
10.1074/JBC.M209306200
12540845
Characterization and Implications of Ca2+ Binding to Pectate Lyase C
2003
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
293.0
1
COLLIMATOR
AREA DETECTOR
SDMS
GRAPHITE CRYSTAL
SINGLE WAVELENGTH
M
x-ray
1
1.54
1.0
1.54
ROTATING ANODE
RIGAKU RT3000
37733.605
PECTATE LYASE C
4.2.2.2
1
man
polymer
40.078
CALCIUM ION
1
syn
non-polymer
18.015
water
162
nat
water
no
no
ATDTGGYAATAGGNVTGAVSKTATSMQDIVNIIDAARLDANGKKVKGGAYPLVITYTGNEDSLINAAAANICGQWSKDPR
GVEIKEFTKGITIIGANGSSANFGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPD
NDTTFESAVDIKGASNTVTVSYNYIHGVKKVGLDGSSSSDTGRNITYHHNYYNDVNARLPLQRGGLVHAYNNLYTNITGS
GLNVRQNGQALIENNWFEKAINPVTSRYDGKNFGTWVLKGNNITKPADFSTYSITWTADTKPYVNADSWTSTGTFPTVAY
NYSPVSAQCVKDKLPGYAGVGKNLATLTSTACK
ATDTGGYAATAGGNVTGAVSKTATSMQDIVNIIDAARLDANGKKVKGGAYPLVITYTGNEDSLINAAAANICGQWSKDPR
GVEIKEFTKGITIIGANGSSANFGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPD
NDTTFESAVDIKGASNTVTVSYNYIHGVKKVGLDGSSSSDTGRNITYHHNYYNDVNARLPLQRGGLVHAYNNLYTNITGS
GLNVRQNGQALIENNWFEKAINPVTSRYDGKNFGTWVLKGNNITKPADFSTYSITWTADTKPYVNADSWTSTGTFPTVAY
NYSPVSAQCVKDKLPGYAGVGKNLATLTSTACK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
556
ERWINIA CHRYSANTHEMI
562
ESCHERICHIA COLI
1
3.75
67.16
11.20
pH 11.20
repository
Initial release
Version format compliance
Version format compliance
1
0
2003-01-30
1
1
2011-05-08
1
2
2011-07-13
PECTATE LYASE C FROM ERWINIA CHRYSANTHEMI ( EC16) TO A RESOLUTION OF 2.2 ANGSTROMS WITH 128 WATERS
PECTATE LYASE C FROM ERWINIA CHRYSANTHEMI AT PH 11.2 WITH 5MM CA2+
PECTATE LYASE C FROM ERWINIA CHRYSANTHEMI AT PH 11.2 WITH 1MM CA2+
PECTATE LYASE C FROM ERWINIA CHRYSANTHEMI AT PH 9.5 WITH 30MM CA2+
PECTATE LYASE C FROM ERWINIA CHRYSANTHEMI AT PH 9.5 WITH 5MM CA2+
PECTATE LYASE C FROM ERWINIA CHRYSANTHEMI AT PH 9.5 WITH 0.3MM CA2+ ADDED
PECTATE LYASE C FROM ERWINIA CHRYSANTHEMI AT PH 9.5 WITH NO CA2+ ADDED
PECTATE LYASE C FROM ERWINIA CHRYSANTHEMI AT PH 4.5 WITH 30MM CA2+
PECTATE LYASE C FROM ERWINIA CHRYSANTHEMI AT PH 4.5 WITH 20MM CA2+
PECTATE LYASE C FROM ERWINIA CHRYSANTHEMI AT PH 4.5 WITH 5MM CA2+
PECTATE LYASE C FROM ERWINIA CHRYSANTHEMI AT PH 4.5 WITH NO CA2+ ADDED
PECTATE LYASE C FROM ERWINIA CHRYSANTHEMI WITH 1 LU+3 ION IN THE PUTATIVE CALCIUM BINDING SITE
PECTATE LYASE C (PLC)
PDBE
Y
PDBE
2002-11-26
REL
CA
CALCIUM ION
HOH
water
CA
1353
2
CA
CA
1353
A
HOH
2001
3
HOH
HOH
2001
A
HOH
2002
3
HOH
HOH
2002
A
HOH
2003
3
HOH
HOH
2003
A
HOH
2004
3
HOH
HOH
2004
A
HOH
2005
3
HOH
HOH
2005
A
HOH
2006
3
HOH
HOH
2006
A
HOH
2007
3
HOH
HOH
2007
A
HOH
2008
3
HOH
HOH
2008
A
HOH
2009
3
HOH
HOH
2009
A
HOH
2010
3
HOH
HOH
2010
A
HOH
2011
3
HOH
HOH
2011
A
HOH
2012
3
HOH
HOH
2012
A
HOH
2013
3
HOH
HOH
2013
A
HOH
2014
3
HOH
HOH
2014
A
HOH
2015
3
HOH
HOH
2015
A
HOH
2016
3
HOH
HOH
2016
A
HOH
2017
3
HOH
HOH
2017
A
HOH
2018
3
HOH
HOH
2018
A
HOH
2019
3
HOH
HOH
2019
A
HOH
2020
3
HOH
HOH
2020
A
HOH
2021
3
HOH
HOH
2021
A
HOH
2022
3
HOH
HOH
2022
A
HOH
2023
3
HOH
HOH
2023
A
HOH
2024
3
HOH
HOH
2024
A
HOH
2025
3
HOH
HOH
2025
A
HOH
2026
3
HOH
HOH
2026
A
HOH
2027
3
HOH
HOH
2027
A
HOH
2028
3
HOH
HOH
2028
A
HOH
2029
3
HOH
HOH
2029
A
HOH
2030
3
HOH
HOH
2030
A
HOH
2031
3
HOH
HOH
2031
A
HOH
2032
3
HOH
HOH
2032
A
HOH
2033
3
HOH
HOH
2033
A
HOH
2034
3
HOH
HOH
2034
A
HOH
2035
3
HOH
HOH
2035
A
HOH
2036
3
HOH
HOH
2036
A
HOH
2037
3
HOH
HOH
2037
A
HOH
2038
3
HOH
HOH
2038
A
HOH
2039
3
HOH
HOH
2039
A
HOH
2040
3
HOH
HOH
2040
A
HOH
2041
3
HOH
HOH
2041
A
HOH
2042
3
HOH
HOH
2042
A
HOH
2043
3
HOH
HOH
2043
A
HOH
2044
3
HOH
HOH
2044
A
HOH
2045
3
HOH
HOH
2045
A
HOH
2046
3
HOH
HOH
2046
A
HOH
2047
3
HOH
HOH
2047
A
HOH
2048
3
HOH
HOH
2048
A
HOH
2049
3
HOH
HOH
2049
A
HOH
2050
3
HOH
HOH
2050
A
HOH
2051
3
HOH
HOH
2051
A
HOH
2052
3
HOH
HOH
2052
A
HOH
2053
3
HOH
HOH
2053
A
HOH
2054
3
HOH
HOH
2054
A
HOH
2055
3
HOH
HOH
2055
A
HOH
2056
3
HOH
HOH
2056
A
HOH
2057
3
HOH
HOH
2057
A
HOH
2058
3
HOH
HOH
2058
A
HOH
2059
3
HOH
HOH
2059
A
HOH
2060
3
HOH
HOH
2060
A
HOH
2061
3
HOH
HOH
2061
A
HOH
2062
3
HOH
HOH
2062
A
HOH
2063
3
HOH
HOH
2063
A
HOH
2064
3
HOH
HOH
2064
A
HOH
2065
3
HOH
HOH
2065
A
HOH
2066
3
HOH
HOH
2066
A
HOH
2067
3
HOH
HOH
2067
A
HOH
2068
3
HOH
HOH
2068
A
HOH
2069
3
HOH
HOH
2069
A
HOH
2070
3
HOH
HOH
2070
A
HOH
2071
3
HOH
HOH
2071
A
HOH
2072
3
HOH
HOH
2072
A
HOH
2073
3
HOH
HOH
2073
A
HOH
2074
3
HOH
HOH
2074
A
HOH
2075
3
HOH
HOH
2075
A
HOH
2076
3
HOH
HOH
2076
A
HOH
2077
3
HOH
HOH
2077
A
HOH
2078
3
HOH
HOH
2078
A
HOH
2079
3
HOH
HOH
2079
A
HOH
2080
3
HOH
HOH
2080
A
HOH
2081
3
HOH
HOH
2081
A
HOH
2082
3
HOH
HOH
2082
A
HOH
2083
3
HOH
HOH
2083
A
HOH
2084
3
HOH
HOH
2084
A
HOH
2085
3
HOH
HOH
2085
A
HOH
2086
3
HOH
HOH
2086
A
HOH
2087
3
HOH
HOH
2087
A
HOH
2088
3
HOH
HOH
2088
A
HOH
2089
3
HOH
HOH
2089
A
HOH
2090
3
HOH
HOH
2090
A
HOH
2091
3
HOH
HOH
2091
A
HOH
2092
3
HOH
HOH
2092
A
HOH
2093
3
HOH
HOH
2093
A
HOH
2094
3
HOH
HOH
2094
A
HOH
2095
3
HOH
HOH
2095
A
HOH
2096
3
HOH
HOH
2096
A
HOH
2097
3
HOH
HOH
2097
A
HOH
2098
3
HOH
HOH
2098
A
HOH
2099
3
HOH
HOH
2099
A
HOH
2100
3
HOH
HOH
2100
A
HOH
2101
3
HOH
HOH
2101
A
HOH
2102
3
HOH
HOH
2102
A
HOH
2103
3
HOH
HOH
2103
A
HOH
2104
3
HOH
HOH
2104
A
HOH
2105
3
HOH
HOH
2105
A
HOH
2106
3
HOH
HOH
2106
A
HOH
2107
3
HOH
HOH
2107
A
HOH
2108
3
HOH
HOH
2108
A
HOH
2109
3
HOH
HOH
2109
A
HOH
2110
3
HOH
HOH
2110
A
HOH
2111
3
HOH
HOH
2111
A
HOH
2112
3
HOH
HOH
2112
A
HOH
2113
3
HOH
HOH
2113
A
HOH
2114
3
HOH
HOH
2114
A
HOH
2115
3
HOH
HOH
2115
A
HOH
2116
3
HOH
HOH
2116
A
HOH
2117
3
HOH
HOH
2117
A
HOH
2118
3
HOH
HOH
2118
A
HOH
2119
3
HOH
HOH
2119
A
HOH
2120
3
HOH
HOH
2120
A
HOH
2121
3
HOH
HOH
2121
A
HOH
2122
3
HOH
HOH
2122
A
HOH
2123
3
HOH
HOH
2123
A
HOH
2124
3
HOH
HOH
2124
A
HOH
2125
3
HOH
HOH
2125
A
HOH
2126
3
HOH
HOH
2126
A
HOH
2127
3
HOH
HOH
2127
A
HOH
2128
3
HOH
HOH
2128
A
HOH
2129
3
HOH
HOH
2129
A
HOH
2130
3
HOH
HOH
2130
A
HOH
2131
3
HOH
HOH
2131
A
HOH
2132
3
HOH
HOH
2132
A
HOH
2133
3
HOH
HOH
2133
A
HOH
2134
3
HOH
HOH
2134
A
HOH
2135
3
HOH
HOH
2135
A
HOH
2136
3
HOH
HOH
2136
A
HOH
2137
3
HOH
HOH
2137
A
HOH
2138
3
HOH
HOH
2138
A
HOH
2139
3
HOH
HOH
2139
A
HOH
2140
3
HOH
HOH
2140
A
HOH
2141
3
HOH
HOH
2141
A
HOH
2142
3
HOH
HOH
2142
A
HOH
2143
3
HOH
HOH
2143
A
HOH
2144
3
HOH
HOH
2144
A
HOH
2145
3
HOH
HOH
2145
A
HOH
2146
3
HOH
HOH
2146
A
HOH
2147
3
HOH
HOH
2147
A
HOH
2148
3
HOH
HOH
2148
A
HOH
2149
3
HOH
HOH
2149
A
HOH
2150
3
HOH
HOH
2150
A
HOH
2151
3
HOH
HOH
2151
A
HOH
2152
3
HOH
HOH
2152
A
HOH
2153
3
HOH
HOH
2153
A
HOH
2154
3
HOH
HOH
2154
A
HOH
2155
3
HOH
HOH
2155
A
HOH
2156
3
HOH
HOH
2156
A
HOH
2157
3
HOH
HOH
2157
A
HOH
2158
3
HOH
HOH
2158
A
HOH
2159
3
HOH
HOH
2159
A
HOH
2160
3
HOH
HOH
2160
A
HOH
2161
3
HOH
HOH
2161
A
HOH
2162
3
HOH
HOH
2162
A
ALA
1
n
1
ALA
1
A
THR
2
n
2
THR
2
A
ASP
3
n
3
ASP
3
A
THR
4
n
4
THR
4
A
GLY
5
n
5
GLY
5
A
GLY
6
n
6
GLY
6
A
TYR
7
n
7
TYR
7
A
ALA
8
n
8
ALA
8
A
ALA
9
n
9
ALA
9
A
THR
10
n
10
THR
10
A
ALA
11
n
11
ALA
11
A
GLY
12
n
12
GLY
12
A
GLY
13
n
13
GLY
13
A
ASN
14
n
14
ASN
14
A
VAL
15
n
15
VAL
15
A
THR
16
n
16
THR
16
A
GLY
17
n
17
GLY
17
A
ALA
18
n
18
ALA
18
A
VAL
19
n
19
VAL
19
A
SER
20
n
20
SER
20
A
LYS
21
n
21
LYS
21
A
THR
22
n
22
THR
22
A
ALA
23
n
23
ALA
23
A
THR
24
n
24
THR
24
A
SER
25
n
25
SER
25
A
MET
26
n
26
MET
26
A
GLN
27
n
27
GLN
27
A
ASP
28
n
28
ASP
28
A
ILE
29
n
29
ILE
29
A
VAL
30
n
30
VAL
30
A
ASN
31
n
31
ASN
31
A
ILE
32
n
32
ILE
32
A
ILE
33
n
33
ILE
33
A
ASP
34
n
34
ASP
34
A
ALA
35
n
35
ALA
35
A
ALA
36
n
36
ALA
36
A
ARG
37
n
37
ARG
37
A
LEU
38
n
38
LEU
38
A
ASP
39
n
39
ASP
39
A
ALA
40
n
40
ALA
40
A
ASN
41
n
41
ASN
41
A
GLY
42
n
42
GLY
42
A
LYS
43
n
43
LYS
43
A
LYS
44
n
44
LYS
44
A
VAL
45
n
45
VAL
45
A
LYS
46
n
46
LYS
46
A
GLY
47
n
47
GLY
47
A
GLY
48
n
48
GLY
48
A
ALA
49
n
49
ALA
49
A
TYR
50
n
50
TYR
50
A
PRO
51
n
51
PRO
51
A
LEU
52
n
52
LEU
52
A
VAL
53
n
53
VAL
53
A
ILE
54
n
54
ILE
54
A
THR
55
n
55
THR
55
A
TYR
56
n
56
TYR
56
A
THR
57
n
57
THR
57
A
GLY
58
n
58
GLY
58
A
ASN
59
n
59
ASN
59
A
GLU
60
n
60
GLU
60
A
ASP
61
n
61
ASP
61
A
SER
62
n
62
SER
62
A
LEU
63
n
63
LEU
63
A
ILE
64
n
64
ILE
64
A
ASN
65
n
65
ASN
65
A
ALA
66
n
66
ALA
66
A
ALA
67
n
67
ALA
67
A
ALA
68
n
68
ALA
68
A
ALA
69
n
69
ALA
69
A
ASN
70
n
70
ASN
70
A
ILE
71
n
71
ILE
71
A
CYS
72
n
72
CYS
72
A
GLY
73
n
73
GLY
73
A
GLN
74
n
74
GLN
74
A
TRP
75
n
75
TRP
75
A
SER
76
n
76
SER
76
A
LYS
77
n
77
LYS
77
A
ASP
78
n
78
ASP
78
A
PRO
79
n
79
PRO
79
A
ARG
80
n
80
ARG
80
A
GLY
81
n
81
GLY
81
A
VAL
82
n
82
VAL
82
A
GLU
83
n
83
GLU
83
A
ILE
84
n
84
ILE
84
A
LYS
85
n
85
LYS
85
A
GLU
86
n
86
GLU
86
A
PHE
87
n
87
PHE
87
A
THR
88
n
88
THR
88
A
LYS
89
n
89
LYS
89
A
GLY
90
n
90
GLY
90
A
ILE
91
n
91
ILE
91
A
THR
92
n
92
THR
92
A
ILE
93
n
93
ILE
93
A
ILE
94
n
94
ILE
94
A
GLY
95
n
95
GLY
95
A
ALA
96
n
96
ALA
96
A
ASN
97
n
97
ASN
97
A
GLY
98
n
98
GLY
98
A
SER
99
n
99
SER
99
A
SER
100
n
100
SER
100
A
ALA
101
n
101
ALA
101
A
ASN
102
n
102
ASN
102
A
PHE
103
n
103
PHE
103
A
GLY
104
n
104
GLY
104
A
ILE
105
n
105
ILE
105
A
TRP
106
n
106
TRP
106
A
ILE
107
n
107
ILE
107
A
LYS
108
n
108
LYS
108
A
LYS
109
n
109
LYS
109
A
SER
110
n
110
SER
110
A
SER
111
n
111
SER
111
A
ASP
112
n
112
ASP
112
A
VAL
113
n
113
VAL
113
A
VAL
114
n
114
VAL
114
A
VAL
115
n
115
VAL
115
A
GLN
116
n
116
GLN
116
A
ASN
117
n
117
ASN
117
A
MET
118
n
118
MET
118
A
ARG
119
n
119
ARG
119
A
ILE
120
n
120
ILE
120
A
GLY
121
n
121
GLY
121
A
TYR
122
n
122
TYR
122
A
LEU
123
n
123
LEU
123
A
PRO
124
n
124
PRO
124
A
GLY
125
n
125
GLY
125
A
GLY
126
n
126
GLY
126
A
ALA
127
n
127
ALA
127
A
LYS
128
n
128
LYS
128
A
ASP
129
n
129
ASP
129
A
GLY
130
n
130
GLY
130
A
ASP
131
n
131
ASP
131
A
MET
132
n
132
MET
132
A
ILE
133
n
133
ILE
133
A
ARG
134
n
134
ARG
134
A
VAL
135
n
135
VAL
135
A
ASP
136
n
136
ASP
136
A
ASP
137
n
137
ASP
137
A
SER
138
n
138
SER
138
A
PRO
139
n
139
PRO
139
A
ASN
140
n
140
ASN
140
A
VAL
141
n
141
VAL
141
A
TRP
142
n
142
TRP
142
A
VAL
143
n
143
VAL
143
A
ASP
144
n
144
ASP
144
A
HIS
145
n
145
HIS
145
A
ASN
146
n
146
ASN
146
A
GLU
147
n
147
GLU
147
A
LEU
148
n
148
LEU
148
A
PHE
149
n
149
PHE
149
A
ALA
150
n
150
ALA
150
A
ALA
151
n
151
ALA
151
A
ASN
152
n
152
ASN
152
A
HIS
153
n
153
HIS
153
A
GLU
154
n
154
GLU
154
A
CYS
155
n
155
CYS
155
A
ASP
156
n
156
ASP
156
A
GLY
157
n
157
GLY
157
A
THR
158
n
158
THR
158
A
PRO
159
n
159
PRO
159
A
ASP
160
n
160
ASP
160
A
ASN
161
n
161
ASN
161
A
ASP
162
n
162
ASP
162
A
THR
163
n
163
THR
163
A
THR
164
n
164
THR
164
A
PHE
165
n
165
PHE
165
A
GLU
166
n
166
GLU
166
A
SER
167
n
167
SER
167
A
ALA
168
n
168
ALA
168
A
VAL
169
n
169
VAL
169
A
ASP
170
n
170
ASP
170
A
ILE
171
n
171
ILE
171
A
LYS
172
n
172
LYS
172
A
GLY
173
n
173
GLY
173
A
ALA
174
n
174
ALA
174
A
SER
175
n
175
SER
175
A
ASN
176
n
176
ASN
176
A
THR
177
n
177
THR
177
A
VAL
178
n
178
VAL
178
A
THR
179
n
179
THR
179
A
VAL
180
n
180
VAL
180
A
SER
181
n
181
SER
181
A
TYR
182
n
182
TYR
182
A
ASN
183
n
183
ASN
183
A
TYR
184
n
184
TYR
184
A
ILE
185
n
185
ILE
185
A
HIS
186
n
186
HIS
186
A
GLY
187
n
187
GLY
187
A
VAL
188
n
188
VAL
188
A
LYS
189
n
189
LYS
189
A
LYS
190
n
190
LYS
190
A
VAL
191
n
191
VAL
191
A
GLY
192
n
192
GLY
192
A
LEU
193
n
193
LEU
193
A
ASP
194
n
194
ASP
194
A
GLY
195
n
195
GLY
195
A
SER
196
n
196
SER
196
A
SER
197
n
197
SER
197
A
SER
198
n
198
SER
198
A
SER
199
n
199
SER
199
A
ASP
200
n
200
ASP
200
A
THR
201
n
201
THR
201
A
GLY
202
n
202
GLY
202
A
ARG
203
n
203
ARG
203
A
ASN
204
n
204
ASN
204
A
ILE
205
n
205
ILE
205
A
THR
206
n
206
THR
206
A
TYR
207
n
207
TYR
207
A
HIS
208
n
208
HIS
208
A
HIS
209
n
209
HIS
209
A
ASN
210
n
210
ASN
210
A
TYR
211
n
211
TYR
211
A
TYR
212
n
212
TYR
212
A
ASN
213
n
213
ASN
213
A
ASP
214
n
214
ASP
214
A
VAL
215
n
215
VAL
215
A
ASN
216
n
216
ASN
216
A
ALA
217
n
217
ALA
217
A
ARG
218
n
218
ARG
218
A
LEU
219
n
219
LEU
219
A
PRO
220
n
220
PRO
220
A
LEU
221
n
221
LEU
221
A
GLN
222
n
222
GLN
222
A
ARG
223
n
223
ARG
223
A
GLY
224
n
224
GLY
224
A
GLY
225
n
225
GLY
225
A
LEU
226
n
226
LEU
226
A
VAL
227
n
227
VAL
227
A
HIS
228
n
228
HIS
228
A
ALA
229
n
229
ALA
229
A
TYR
230
n
230
TYR
230
A
ASN
231
n
231
ASN
231
A
ASN
232
n
232
ASN
232
A
LEU
233
n
233
LEU
233
A
TYR
234
n
234
TYR
234
A
THR
235
n
235
THR
235
A
ASN
236
n
236
ASN
236
A
ILE
237
n
237
ILE
237
A
THR
238
n
238
THR
238
A
GLY
239
n
239
GLY
239
A
SER
240
n
240
SER
240
A
GLY
241
n
241
GLY
241
A
LEU
242
n
242
LEU
242
A
ASN
243
n
243
ASN
243
A
VAL
244
n
244
VAL
244
A
ARG
245
n
245
ARG
245
A
GLN
246
n
246
GLN
246
A
ASN
247
n
247
ASN
247
A
GLY
248
n
248
GLY
248
A
GLN
249
n
249
GLN
249
A
ALA
250
n
250
ALA
250
A
LEU
251
n
251
LEU
251
A
ILE
252
n
252
ILE
252
A
GLU
253
n
253
GLU
253
A
ASN
254
n
254
ASN
254
A
ASN
255
n
255
ASN
255
A
TRP
256
n
256
TRP
256
A
PHE
257
n
257
PHE
257
A
GLU
258
n
258
GLU
258
A
LYS
259
n
259
LYS
259
A
ALA
260
n
260
ALA
260
A
ILE
261
n
261
ILE
261
A
ASN
262
n
262
ASN
262
A
PRO
263
n
263
PRO
263
A
VAL
264
n
264
VAL
264
A
THR
265
n
265
THR
265
A
SER
266
n
266
SER
266
A
ARG
267
n
267
ARG
267
A
TYR
268
n
268
TYR
268
A
ASP
269
n
269
ASP
269
A
GLY
270
n
270
GLY
270
A
LYS
271
n
271
LYS
271
A
ASN
272
n
272
ASN
272
A
PHE
273
n
273
PHE
273
A
GLY
274
n
274
GLY
274
A
THR
275
n
275
THR
275
A
TRP
276
n
276
TRP
276
A
VAL
277
n
277
VAL
277
A
LEU
278
n
278
LEU
278
A
LYS
279
n
279
LYS
279
A
GLY
280
n
280
GLY
280
A
ASN
281
n
281
ASN
281
A
ASN
282
n
282
ASN
282
A
ILE
283
n
283
ILE
283
A
THR
284
n
284
THR
284
A
LYS
285
n
285
LYS
285
A
PRO
286
n
286
PRO
286
A
ALA
287
n
287
ALA
287
A
ASP
288
n
288
ASP
288
A
PHE
289
n
289
PHE
289
A
SER
290
n
290
SER
290
A
THR
291
n
291
THR
291
A
TYR
292
n
292
TYR
292
A
SER
293
n
293
SER
293
A
ILE
294
n
294
ILE
294
A
THR
295
n
295
THR
295
A
TRP
296
n
296
TRP
296
A
THR
297
n
297
THR
297
A
ALA
298
n
298
ALA
298
A
ASP
299
n
299
ASP
299
A
THR
300
n
300
THR
300
A
LYS
301
n
301
LYS
301
A
PRO
302
n
302
PRO
302
A
TYR
303
n
303
TYR
303
A
VAL
304
n
304
VAL
304
A
ASN
305
n
305
ASN
305
A
ALA
306
n
306
ALA
306
A
ASP
307
n
307
ASP
307
A
SER
308
n
308
SER
308
A
TRP
309
n
309
TRP
309
A
THR
310
n
310
THR
310
A
SER
311
n
311
SER
311
A
THR
312
n
312
THR
312
A
GLY
313
n
313
GLY
313
A
THR
314
n
314
THR
314
A
PHE
315
n
315
PHE
315
A
PRO
316
n
316
PRO
316
A
THR
317
n
317
THR
317
A
VAL
318
n
318
VAL
318
A
ALA
319
n
319
ALA
319
A
TYR
320
n
320
TYR
320
A
ASN
321
n
321
ASN
321
A
TYR
322
n
322
TYR
322
A
SER
323
n
323
SER
323
A
PRO
324
n
324
PRO
324
A
VAL
325
n
325
VAL
325
A
SER
326
n
326
SER
326
A
ALA
327
n
327
ALA
327
A
GLN
328
n
328
GLN
328
A
CYS
329
n
329
CYS
329
A
VAL
330
n
330
VAL
330
A
LYS
331
n
331
LYS
331
A
ASP
332
n
332
ASP
332
A
LYS
333
n
333
LYS
333
A
LEU
334
n
334
LEU
334
A
PRO
335
n
335
PRO
335
A
GLY
336
n
336
GLY
336
A
TYR
337
n
337
TYR
337
A
ALA
338
n
338
ALA
338
A
GLY
339
n
339
GLY
339
A
VAL
340
n
340
VAL
340
A
GLY
341
n
341
GLY
341
A
LYS
342
n
342
LYS
342
A
ASN
343
n
343
ASN
343
A
LEU
344
n
344
LEU
344
A
ALA
345
n
345
ALA
345
A
THR
346
n
346
THR
346
A
LEU
347
n
347
LEU
347
A
THR
348
n
348
THR
348
A
SER
349
n
349
SER
349
A
THR
350
n
350
THR
350
A
ALA
351
n
351
ALA
351
A
CYS
352
n
352
CYS
352
A
LYS
353
n
353
LYS
353
A
author_and_software_defined_assembly
PQS
1
monomeric
A
GLU
166
A
OE1
GLU
166
1_555
A
CA
1353
B
CA
CA
1_555
A
ASP
131
A
OD1
ASP
131
1_555
71.3
A
GLU
166
A
OE1
GLU
166
1_555
A
CA
1353
B
CA
CA
1_555
A
ASP
170
A
OD2
ASP
170
1_555
94.2
A
ASP
131
A
OD1
ASP
131
1_555
A
CA
1353
B
CA
CA
1_555
A
ASP
170
A
OD2
ASP
170
1_555
85.8
A
GLU
166
A
OE1
GLU
166
1_555
A
CA
1353
B
CA
CA
1_555
A
HOH
2073
C
O
HOH
1_555
162.8
A
ASP
131
A
OD1
ASP
131
1_555
A
CA
1353
B
CA
CA
1_555
A
HOH
2073
C
O
HOH
1_555
125.9
A
ASP
170
A
OD2
ASP
170
1_555
A
CA
1353
B
CA
CA
1_555
A
HOH
2073
C
O
HOH
1_555
87.6
A
GLU
166
A
OE1
GLU
166
1_555
A
CA
1353
B
CA
CA
1_555
A
HOH
2093
C
O
HOH
1_555
77.3
A
ASP
131
A
OD1
ASP
131
1_555
A
CA
1353
B
CA
CA
1_555
A
HOH
2093
C
O
HOH
1_555
147.7
A
ASP
170
A
OD2
ASP
170
1_555
A
CA
1353
B
CA
CA
1_555
A
HOH
2093
C
O
HOH
1_555
89.2
A
HOH
2073
C
O
HOH
1_555
A
CA
1353
B
CA
CA
1_555
A
HOH
2093
C
O
HOH
1_555
85.7
A
GLU
166
A
OE1
GLU
166
1_555
A
CA
1353
B
CA
CA
1_555
A
ASP
129
A
OD1
ASP
129
1_555
92.0
A
ASP
131
A
OD1
ASP
131
1_555
A
CA
1353
B
CA
CA
1_555
A
ASP
129
A
OD1
ASP
129
1_555
100.7
A
ASP
170
A
OD2
ASP
170
1_555
A
CA
1353
B
CA
CA
1_555
A
ASP
129
A
OD1
ASP
129
1_555
172.2
A
HOH
2073
C
O
HOH
1_555
A
CA
1353
B
CA
CA
1_555
A
ASP
129
A
OD1
ASP
129
1_555
85.1
A
HOH
2093
C
O
HOH
1_555
A
CA
1353
B
CA
CA
1_555
A
ASP
129
A
OD1
ASP
129
1_555
87.4
A
GLU
166
A
OE1
GLU
166
1_555
A
CA
1353
B
CA
CA
1_555
A
ASP
131
A
OD2
ASP
131
1_555
121.1
A
ASP
131
A
OD1
ASP
131
1_555
A
CA
1353
B
CA
CA
1_555
A
ASP
131
A
OD2
ASP
131
1_555
51.7
A
ASP
170
A
OD2
ASP
170
1_555
A
CA
1353
B
CA
CA
1_555
A
ASP
131
A
OD2
ASP
131
1_555
95.0
A
HOH
2073
C
O
HOH
1_555
A
CA
1353
B
CA
CA
1_555
A
ASP
131
A
OD2
ASP
131
1_555
75.6
A
HOH
2093
C
O
HOH
1_555
A
CA
1353
B
CA
CA
1_555
A
ASP
131
A
OD2
ASP
131
1_555
160.6
A
ASP
129
A
OD1
ASP
129
1_555
A
CA
1353
B
CA
CA
1_555
A
ASP
131
A
OD2
ASP
131
1_555
85.9
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LYS
21
A
N
LYS
21
A
O
VAL
53
A
O
VAL
53
A
N
ILE
54
A
N
ILE
54
A
O
THR
92
A
O
THR
92
A
N
ILE
93
A
N
ILE
93
A
O
VAL
114
A
O
VAL
114
A
N
VAL
115
A
N
VAL
115
A
O
TRP
142
A
O
TRP
142
A
N
VAL
141
A
N
VAL
141
A
O
THR
177
A
O
THR
177
A
N
VAL
178
A
N
VAL
178
A
O
ASN
204
A
O
ASN
204
A
N
ILE
205
A
N
ILE
205
A
O
LEU
226
A
O
LEU
226
A
N
VAL
227
A
N
VAL
227
A
O
GLN
249
A
O
GLN
249
A
N
ALA
250
A
N
ALA
250
A
O
THR
275
A
O
THR
275
A
N
VAL
82
A
N
VAL
82
A
O
GLY
104
A
O
GLY
104
A
N
ILE
107
A
N
ILE
107
A
O
ARG
134
A
O
ARG
134
A
N
VAL
135
A
N
VAL
135
A
O
ASP
170
A
O
ASP
170
A
N
ILE
120
A
N
ILE
120
A
O
GLU
147
A
O
GLU
147
A
N
LEU
148
A
N
LEU
148
A
O
TYR
184
A
O
TYR
184
A
N
ILE
185
A
N
ILE
185
A
O
TYR
211
A
O
TYR
211
A
N
TYR
212
A
N
TYR
212
A
O
LEU
233
A
O
LEU
233
A
N
TYR
234
A
N
TYR
234
A
O
TRP
256
A
O
TRP
256
A
O
ALA
260
A
O
ALA
260
A
N
THR
295
A
N
THR
295
A
N
ASP
194
A
N
ASP
194
A
O
LEU
221
A
O
LEU
221
A
N
GLN
222
A
N
GLN
222
A
O
ASN
243
A
O
ASN
243
A
N
VAL
244
A
N
VAL
244
A
O
THR
265
A
O
THR
265
A
N
SER
266
A
N
SER
266
A
O
VAL
304
A
O
VAL
304
1
A
CA
LYS
353
A
CA
LYS
353
1
Y
1
A
C
LYS
353
A
C
LYS
353
1
Y
1
A
O
LYS
353
A
O
LYS
353
1
Y
1
A
CB
LYS
353
A
CB
LYS
353
1
Y
1
A
CG
LYS
353
A
CG
LYS
353
1
Y
1
A
CD
LYS
353
A
CD
LYS
353
1
Y
1
A
CE
LYS
353
A
CE
LYS
353
1
Y
1
A
NZ
LYS
353
A
NZ
LYS
353
1
Y
1
A
VAL
15
-124.71
-169.28
1
A
ASN
70
-152.56
65.69
1
A
ALA
150
-161.21
-138.48
1
A
ASP
162
-155.56
12.20
1
A
GLU
166
-87.52
-158.04
1
A
ALA
174
-77.52
37.62
1
A
ARG
203
74.75
156.06
1
A
ARG
218
63.10
75.27
1
A
TYR
268
90.94
-14.48
1
A
ALA
306
-95.15
39.00
1
A
CYS
352
-77.60
-71.25
0.2185
0.1691
0.1691
2.20
10.0
3168
31716
10.0
RANDOM
10000000.000
0.0010
1
THROUGHOUT
2.0
MOLECULAR REPLACEMENT
2.20
10.0
162
2812
1
0
2649
0.007
1.53
24.62
1.12
2.200
10.000
1O88
36049
2.000
0.04220
1
9.9900
2.870
94.0
refinement
X-PLOR
3.1
data reduction
SDMS
data scaling
SDMS
phasing
X-PLOR
PECTATE LYASE C (E.C.4.2.2.2)
Pectate Lyase C From Erwinia Chrysanthemi at pH 11.2 with 30mM Ca2+
1
N
N
2
N
N
3
N
N
A
SER
25
A
SER
25
HELX_P
A
ALA
36
A
ALA
36
1
1
12
A
GLU
60
A
GLU
60
HELX_P
A
ALA
69
A
ALA
69
1
2
10
A
ASN
70
A
ASN
70
HELX_P
A
GLN
74
A
GLN
74
5
3
5
A
GLY
125
A
GLY
125
HELX_P
A
ASP
129
A
ASP
129
5
4
5
A
THR
158
A
THR
158
HELX_P
A
ASP
162
A
ASP
162
5
5
5
A
ALA
287
A
ALA
287
HELX_P
A
TYR
292
A
TYR
292
1
6
6
A
SER
326
A
SER
326
HELX_P
A
LEU
334
A
LEU
334
1
7
9
A
PRO
335
A
PRO
335
HELX_P
A
TYR
337
A
TYR
337
5
8
3
A
THR
348
A
THR
348
HELX_P
A
CYS
352
A
CYS
352
5
9
5
disulf
2.019
A
CYS
72
A
SG
CYS
72
1_555
A
CYS
155
A
SG
CYS
155
1_555
disulf
2.023
A
CYS
329
A
SG
CYS
329
1_555
A
CYS
352
A
SG
CYS
352
1_555
metalc
2.264
A
CA
1353
B
CA
CA
1_555
A
GLU
166
A
OE1
GLU
166
1_555
metalc
2.496
A
CA
1353
B
CA
CA
1_555
A
ASP
131
A
OD1
ASP
131
1_555
metalc
2.341
A
CA
1353
B
CA
CA
1_555
A
ASP
170
A
OD2
ASP
170
1_555
metalc
2.425
A
CA
1353
B
CA
CA
1_555
A
HOH
2073
C
O
HOH
1_555
metalc
2.555
A
CA
1353
B
CA
CA
1_555
A
HOH
2093
C
O
HOH
1_555
metalc
2.348
A
CA
1353
B
CA
CA
1_555
A
ASP
129
A
OD1
ASP
129
1_555
metalc
2.529
A
CA
1353
B
CA
CA
1_555
A
ASP
131
A
OD2
ASP
131
1_555
HYDROLASE
HYDROLASE, PECTATE LYASE CLEAVAGE, CALCIUM BINDING, PARALLEL BETA- HELIX, LYASE
A
LEU
219
A
LEU
219
1
A
PRO
220
A
PRO
220
0.45
PELC_ERWCH
UNP
1
P11073
23
375
1O88
1
353
P11073
A
1
1
353
10
4
7
5
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
A
VAL
19
A
VAL
19
A
ALA
23
A
ALA
23
A
LEU
52
A
LEU
52
A
TYR
56
A
TYR
56
A
ILE
91
A
ILE
91
A
GLY
95
A
GLY
95
A
VAL
113
A
VAL
113
A
GLN
116
A
GLN
116
A
VAL
141
A
VAL
141
A
ASP
144
A
ASP
144
A
THR
177
A
THR
177
A
SER
181
A
SER
181
A
ASN
204
A
ASN
204
A
HIS
208
A
HIS
208
A
LEU
226
A
LEU
226
A
TYR
230
A
TYR
230
A
GLN
249
A
GLN
249
A
GLU
253
A
GLU
253
A
THR
275
A
THR
275
A
LYS
279
A
LYS
279
A
GLY
81
A
GLY
81
A
LYS
85
A
LYS
85
A
GLY
104
A
GLY
104
A
LYS
108
A
LYS
108
A
ILE
133
A
ILE
133
A
ASP
136
A
ASP
136
A
VAL
169
A
VAL
169
A
LYS
172
A
LYS
172
A
ARG
119
A
ARG
119
A
GLY
121
A
GLY
121
A
GLU
147
A
GLU
147
A
PHE
149
A
PHE
149
A
TYR
184
A
TYR
184
A
LYS
190
A
LYS
190
A
TYR
211
A
TYR
211
A
ALA
217
A
ALA
217
A
LEU
233
A
LEU
233
A
ILE
237
A
ILE
237
A
TRP
256
A
TRP
256
A
ILE
261
A
ILE
261
A
ILE
294
A
ILE
294
A
THR
295
A
THR
295
A
LEU
193
A
LEU
193
A
ASP
194
A
ASP
194
A
LEU
221
A
LEU
221
A
ARG
223
A
ARG
223
A
LEU
242
A
LEU
242
A
ARG
245
A
ARG
245
A
VAL
264
A
VAL
264
A
SER
266
A
SER
266
A
VAL
304
A
VAL
304
A
ASN
305
A
ASN
305
BINDING SITE FOR RESIDUE CA A1353
Software
6
A
ASP
129
A
ASP
129
6
1_555
A
ASP
131
A
ASP
131
6
1_555
A
GLU
166
A
GLU
166
6
1_555
A
ASP
170
A
ASP
170
6
1_555
A
HOH
2073
C
HOH
6
1_555
A
HOH
2093
C
HOH
6
1_555
19
P 21 21 21