0.006334
0.003657
0.000000
0.000000
0.007314
0.000000
0.000000
0.000000
0.024993
0.00000
0.00000
0.00000
Michel, G.
Cygler, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
157.874
157.874
40.011
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C21 H29 N7 O14 P2
665.441
1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
NADH
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
O4 P -3
94.971
PHOSPHATE ION
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
278
19463
10.1074/JBC.M300794200
12637497
Structures of Shikimate Dehydrogenase Aroe and its Paralog Ydib: A Common Structural Framework for Different Activities
2003
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.0
1
CCD
2001-08-11
ADSC CCD
SINGLE WAVELENGTH
M
x-ray
1
0.97161
1.0
X8C
NSLS
0.97161
SYNCHROTRON
NSLS BEAMLINE X8C
31773.576
HYPOTHETICAL SHIKIMATE 5-DEHYDROGENASE-LIKE PROTEIN YDIB
1.1.1.25
2
man
polymer
665.441
1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
2
syn
non-polymer
94.971
PHOSPHATE ION
5
syn
non-polymer
18.015
water
154
nat
water
no
yes
(MSE)DVTAKYELIGL(MSE)AYPIRHSLSPE(MSE)QNKALEKAGLPFTY(MSE)AFEVDNDSFPGAIEGLKALK
(MSE)RGTGVS(MSE)PNKQLACEYVDELTPAAKLVGAINTIVNDDGYLRGYNTDGTGHIRAIKESGFDIKGKT(MSE)V
LLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVG
(MSE)KPLENESLVNDISLLHPGLLVTECVYNPH(MSE)TKLLQQAQQAGCKTIDGYG(MSE)LLWQGAEQFTLWTGKDF
PLEYVKQV(MSE)GFGA
MDVTAKYELIGLMAYPIRHSLSPEMQNKALEKAGLPFTYMAFEVDNDSFPGAIEGLKALKMRGTGVSMPNKQLACEYVDE
LTPAAKLVGAINTIVNDDGYLRGYNTDGTGHIRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEF
FDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMTK
LLQQAQQAGCKTIDGYGMLLWQGAEQFTLWTGKDFPLEYVKQVMGFGA
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
MC1061 P3
sample
GST-TAG, SELEMETHIONYL PROTEIN
47035
562
ESCHERICHIA COLI
562
ESCHERICHIA COLI
DL41(DE3)
PLASMID
PGEX-4T1
1
2.305
45
7.50
KH2PO4, NAH2PO4, HEPES, pH 7.50
repository
Initial release
Atomic model
Database references
Derived calculations
Non-polymer description
Other
Source and taxonomy
Structure summary
Version format compliance
1
0
2003-02-01
1
1
2013-10-30
PDBE
Y
PDBE
2002-12-12
REL
NAI
1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
PO4
PHOSPHATE ION
HOH
water
NAI
301
2
NAI
NAI
301
A
PO4
302
3
PO4
PO4
302
A
PO4
303
3
PO4
PO4
303
A
PO4
304
3
PO4
PO4
304
A
NAI
301
2
NAI
NAI
301
B
PO4
302
3
PO4
PO4
302
B
PO4
303
3
PO4
PO4
303
B
HOH
2001
4
HOH
HOH
2001
A
HOH
2002
4
HOH
HOH
2002
A
HOH
2003
4
HOH
HOH
2003
A
HOH
2004
4
HOH
HOH
2004
A
HOH
2005
4
HOH
HOH
2005
A
HOH
2006
4
HOH
HOH
2006
A
HOH
2007
4
HOH
HOH
2007
A
HOH
2008
4
HOH
HOH
2008
A
HOH
2009
4
HOH
HOH
2009
A
HOH
2010
4
HOH
HOH
2010
A
HOH
2011
4
HOH
HOH
2011
A
HOH
2012
4
HOH
HOH
2012
A
HOH
2013
4
HOH
HOH
2013
A
HOH
2014
4
HOH
HOH
2014
A
HOH
2015
4
HOH
HOH
2015
A
HOH
2016
4
HOH
HOH
2016
A
HOH
2017
4
HOH
HOH
2017
A
HOH
2018
4
HOH
HOH
2018
A
HOH
2019
4
HOH
HOH
2019
A
HOH
2020
4
HOH
HOH
2020
A
HOH
2021
4
HOH
HOH
2021
A
HOH
2022
4
HOH
HOH
2022
A
HOH
2023
4
HOH
HOH
2023
A
HOH
2024
4
HOH
HOH
2024
A
HOH
2025
4
HOH
HOH
2025
A
HOH
2026
4
HOH
HOH
2026
A
HOH
2027
4
HOH
HOH
2027
A
HOH
2028
4
HOH
HOH
2028
A
HOH
2029
4
HOH
HOH
2029
A
HOH
2030
4
HOH
HOH
2030
A
HOH
2031
4
HOH
HOH
2031
A
HOH
2032
4
HOH
HOH
2032
A
HOH
2033
4
HOH
HOH
2033
A
HOH
2034
4
HOH
HOH
2034
A
HOH
2035
4
HOH
HOH
2035
A
HOH
2036
4
HOH
HOH
2036
A
HOH
2037
4
HOH
HOH
2037
A
HOH
2038
4
HOH
HOH
2038
A
HOH
2039
4
HOH
HOH
2039
A
HOH
2040
4
HOH
HOH
2040
A
HOH
2041
4
HOH
HOH
2041
A
HOH
2042
4
HOH
HOH
2042
A
HOH
2043
4
HOH
HOH
2043
A
HOH
2044
4
HOH
HOH
2044
A
HOH
2045
4
HOH
HOH
2045
A
HOH
2046
4
HOH
HOH
2046
A
HOH
2047
4
HOH
HOH
2047
A
HOH
2048
4
HOH
HOH
2048
A
HOH
2049
4
HOH
HOH
2049
A
HOH
2050
4
HOH
HOH
2050
A
HOH
2051
4
HOH
HOH
2051
A
HOH
2052
4
HOH
HOH
2052
A
HOH
2053
4
HOH
HOH
2053
A
HOH
2054
4
HOH
HOH
2054
A
HOH
2055
4
HOH
HOH
2055
A
HOH
2056
4
HOH
HOH
2056
A
HOH
2057
4
HOH
HOH
2057
A
HOH
2058
4
HOH
HOH
2058
A
HOH
2059
4
HOH
HOH
2059
A
HOH
2060
4
HOH
HOH
2060
A
HOH
2061
4
HOH
HOH
2061
A
HOH
2062
4
HOH
HOH
2062
A
HOH
2063
4
HOH
HOH
2063
A
HOH
2064
4
HOH
HOH
2064
A
HOH
2065
4
HOH
HOH
2065
A
HOH
2066
4
HOH
HOH
2066
A
HOH
2067
4
HOH
HOH
2067
A
HOH
2068
4
HOH
HOH
2068
A
HOH
2069
4
HOH
HOH
2069
A
HOH
2070
4
HOH
HOH
2070
A
HOH
2071
4
HOH
HOH
2071
A
HOH
2072
4
HOH
HOH
2072
A
HOH
2073
4
HOH
HOH
2073
A
HOH
2074
4
HOH
HOH
2074
A
HOH
2075
4
HOH
HOH
2075
A
HOH
2076
4
HOH
HOH
2076
A
HOH
2077
4
HOH
HOH
2077
A
HOH
2078
4
HOH
HOH
2078
A
HOH
2079
4
HOH
HOH
2079
A
HOH
2080
4
HOH
HOH
2080
A
HOH
2081
4
HOH
HOH
2081
A
HOH
2082
4
HOH
HOH
2082
A
HOH
2083
4
HOH
HOH
2083
A
HOH
2084
4
HOH
HOH
2084
A
HOH
2085
4
HOH
HOH
2085
A
HOH
2086
4
HOH
HOH
2086
A
HOH
2087
4
HOH
HOH
2087
A
HOH
2088
4
HOH
HOH
2088
A
HOH
2001
4
HOH
HOH
2001
B
HOH
2002
4
HOH
HOH
2002
B
HOH
2003
4
HOH
HOH
2003
B
HOH
2004
4
HOH
HOH
2004
B
HOH
2005
4
HOH
HOH
2005
B
HOH
2006
4
HOH
HOH
2006
B
HOH
2007
4
HOH
HOH
2007
B
HOH
2008
4
HOH
HOH
2008
B
HOH
2009
4
HOH
HOH
2009
B
HOH
2010
4
HOH
HOH
2010
B
HOH
2011
4
HOH
HOH
2011
B
HOH
2012
4
HOH
HOH
2012
B
HOH
2013
4
HOH
HOH
2013
B
HOH
2014
4
HOH
HOH
2014
B
HOH
2015
4
HOH
HOH
2015
B
HOH
2016
4
HOH
HOH
2016
B
HOH
2017
4
HOH
HOH
2017
B
HOH
2018
4
HOH
HOH
2018
B
HOH
2019
4
HOH
HOH
2019
B
HOH
2020
4
HOH
HOH
2020
B
HOH
2021
4
HOH
HOH
2021
B
HOH
2022
4
HOH
HOH
2022
B
HOH
2023
4
HOH
HOH
2023
B
HOH
2024
4
HOH
HOH
2024
B
HOH
2025
4
HOH
HOH
2025
B
HOH
2026
4
HOH
HOH
2026
B
HOH
2027
4
HOH
HOH
2027
B
HOH
2028
4
HOH
HOH
2028
B
HOH
2029
4
HOH
HOH
2029
B
HOH
2030
4
HOH
HOH
2030
B
HOH
2031
4
HOH
HOH
2031
B
HOH
2032
4
HOH
HOH
2032
B
HOH
2033
4
HOH
HOH
2033
B
HOH
2034
4
HOH
HOH
2034
B
HOH
2035
4
HOH
HOH
2035
B
HOH
2036
4
HOH
HOH
2036
B
HOH
2037
4
HOH
HOH
2037
B
HOH
2038
4
HOH
HOH
2038
B
HOH
2039
4
HOH
HOH
2039
B
HOH
2040
4
HOH
HOH
2040
B
HOH
2041
4
HOH
HOH
2041
B
HOH
2042
4
HOH
HOH
2042
B
HOH
2043
4
HOH
HOH
2043
B
HOH
2044
4
HOH
HOH
2044
B
HOH
2045
4
HOH
HOH
2045
B
HOH
2046
4
HOH
HOH
2046
B
HOH
2047
4
HOH
HOH
2047
B
HOH
2048
4
HOH
HOH
2048
B
HOH
2049
4
HOH
HOH
2049
B
HOH
2050
4
HOH
HOH
2050
B
HOH
2051
4
HOH
HOH
2051
B
HOH
2052
4
HOH
HOH
2052
B
HOH
2053
4
HOH
HOH
2053
B
HOH
2054
4
HOH
HOH
2054
B
HOH
2055
4
HOH
HOH
2055
B
HOH
2056
4
HOH
HOH
2056
B
HOH
2057
4
HOH
HOH
2057
B
HOH
2058
4
HOH
HOH
2058
B
HOH
2059
4
HOH
HOH
2059
B
HOH
2060
4
HOH
HOH
2060
B
HOH
2061
4
HOH
HOH
2061
B
HOH
2062
4
HOH
HOH
2062
B
HOH
2063
4
HOH
HOH
2063
B
HOH
2064
4
HOH
HOH
2064
B
HOH
2065
4
HOH
HOH
2065
B
HOH
2066
4
HOH
HOH
2066
B
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
n
5
5
A
n
6
6
A
TYR
7
n
7
TYR
7
A
GLU
8
n
8
GLU
8
A
LEU
9
n
9
LEU
9
A
ILE
10
n
10
ILE
10
A
GLY
11
n
11
GLY
11
A
LEU
12
n
12
LEU
12
A
MSE
13
n
13
MSE
13
A
ALA
14
n
14
ALA
14
A
TYR
15
n
15
TYR
15
A
PRO
16
n
16
PRO
16
A
ILE
17
n
17
ILE
17
A
ARG
18
n
18
ARG
18
A
HIS
19
n
19
HIS
19
A
SER
20
n
20
SER
20
A
LEU
21
n
21
LEU
21
A
SER
22
n
22
SER
22
A
PRO
23
n
23
PRO
23
A
GLU
24
n
24
GLU
24
A
MSE
25
n
25
MSE
25
A
GLN
26
n
26
GLN
26
A
ASN
27
n
27
ASN
27
A
LYS
28
n
28
LYS
28
A
ALA
29
n
29
ALA
29
A
LEU
30
n
30
LEU
30
A
GLU
31
n
31
GLU
31
A
LYS
32
n
32
LYS
32
A
ALA
33
n
33
ALA
33
A
GLY
34
n
34
GLY
34
A
LEU
35
n
35
LEU
35
A
PRO
36
n
36
PRO
36
A
PHE
37
n
37
PHE
37
A
THR
38
n
38
THR
38
A
TYR
39
n
39
TYR
39
A
MSE
40
n
40
MSE
40
A
ALA
41
n
41
ALA
41
A
PHE
42
n
42
PHE
42
A
GLU
43
n
43
GLU
43
A
VAL
44
n
44
VAL
44
A
ASP
45
n
45
ASP
45
A
ASN
46
n
46
ASN
46
A
ASP
47
n
47
ASP
47
A
SER
48
n
48
SER
48
A
PHE
49
n
49
PHE
49
A
PRO
50
n
50
PRO
50
A
GLY
51
n
51
GLY
51
A
ALA
52
n
52
ALA
52
A
ILE
53
n
53
ILE
53
A
GLU
54
n
54
GLU
54
A
GLY
55
n
55
GLY
55
A
LEU
56
n
56
LEU
56
A
LYS
57
n
57
LYS
57
A
ALA
58
n
58
ALA
58
A
LEU
59
n
59
LEU
59
A
LYS
60
n
60
LYS
60
A
MSE
61
n
61
MSE
61
A
ARG
62
n
62
ARG
62
A
GLY
63
n
63
GLY
63
A
THR
64
n
64
THR
64
A
GLY
65
n
65
GLY
65
A
VAL
66
n
66
VAL
66
A
SER
67
n
67
SER
67
A
MSE
68
n
68
MSE
68
A
PRO
69
n
69
PRO
69
A
ASN
70
n
70
ASN
70
A
LYS
71
n
71
LYS
71
A
GLN
72
n
72
GLN
72
A
LEU
73
n
73
LEU
73
A
ALA
74
n
74
ALA
74
A
CYS
75
n
75
CYS
75
A
GLU
76
n
76
GLU
76
A
TYR
77
n
77
TYR
77
A
VAL
78
n
78
VAL
78
A
ASP
79
n
79
ASP
79
A
GLU
80
n
80
GLU
80
A
LEU
81
n
81
LEU
81
A
THR
82
n
82
THR
82
A
PRO
83
n
83
PRO
83
A
ALA
84
n
84
ALA
84
A
ALA
85
n
85
ALA
85
A
LYS
86
n
86
LYS
86
A
LEU
87
n
87
LEU
87
A
VAL
88
n
88
VAL
88
A
GLY
89
n
89
GLY
89
A
ALA
90
n
90
ALA
90
A
ILE
91
n
91
ILE
91
A
ASN
92
n
92
ASN
92
A
THR
93
n
93
THR
93
A
ILE
94
n
94
ILE
94
A
VAL
95
n
95
VAL
95
A
ASN
96
n
96
ASN
96
A
ASP
97
n
97
ASP
97
A
ASP
98
n
98
ASP
98
A
GLY
99
n
99
GLY
99
A
TYR
100
n
100
TYR
100
A
LEU
101
n
101
LEU
101
A
ARG
102
n
102
ARG
102
A
GLY
103
n
103
GLY
103
A
TYR
104
n
104
TYR
104
A
ASN
105
n
105
ASN
105
A
THR
106
n
106
THR
106
A
ASP
107
n
107
ASP
107
A
GLY
108
n
108
GLY
108
A
THR
109
n
109
THR
109
A
GLY
110
n
110
GLY
110
A
HIS
111
n
111
HIS
111
A
ILE
112
n
112
ILE
112
A
ARG
113
n
113
ARG
113
A
ALA
114
n
114
ALA
114
A
ILE
115
n
115
ILE
115
A
LYS
116
n
116
LYS
116
A
GLU
117
n
117
GLU
117
A
SER
118
n
118
SER
118
A
GLY
119
n
119
GLY
119
A
PHE
120
n
120
PHE
120
A
ASP
121
n
121
ASP
121
A
ILE
122
n
122
ILE
122
A
LYS
123
n
123
LYS
123
A
GLY
124
n
124
GLY
124
A
LYS
125
n
125
LYS
125
A
THR
126
n
126
THR
126
A
MSE
127
n
127
MSE
127
A
VAL
128
n
128
VAL
128
A
LEU
129
n
129
LEU
129
A
LEU
130
n
130
LEU
130
A
GLY
131
n
131
GLY
131
A
ALA
132
n
132
ALA
132
A
GLY
133
n
133
GLY
133
A
GLY
134
n
134
GLY
134
A
ALA
135
n
135
ALA
135
A
SER
136
n
136
SER
136
A
THR
137
n
137
THR
137
A
ALA
138
n
138
ALA
138
A
ILE
139
n
139
ILE
139
A
GLY
140
n
140
GLY
140
A
ALA
141
n
141
ALA
141
A
GLN
142
n
142
GLN
142
A
GLY
143
n
143
GLY
143
A
ALA
144
n
144
ALA
144
A
ILE
145
n
145
ILE
145
A
GLU
146
n
146
GLU
146
A
GLY
147
n
147
GLY
147
A
LEU
148
n
148
LEU
148
A
LYS
149
n
149
LYS
149
A
GLU
150
n
150
GLU
150
A
ILE
151
n
151
ILE
151
A
LYS
152
n
152
LYS
152
A
LEU
153
n
153
LEU
153
A
PHE
154
n
154
PHE
154
A
ASN
155
n
155
ASN
155
A
ARG
156
n
156
ARG
156
A
ARG
157
n
157
ARG
157
A
ASP
158
n
158
ASP
158
A
GLU
159
n
159
GLU
159
A
PHE
160
n
160
PHE
160
A
PHE
161
n
161
PHE
161
A
ASP
162
n
162
ASP
162
A
LYS
163
n
163
LYS
163
A
ALA
164
n
164
ALA
164
A
LEU
165
n
165
LEU
165
A
ALA
166
n
166
ALA
166
A
PHE
167
n
167
PHE
167
A
ALA
168
n
168
ALA
168
A
GLN
169
n
169
GLN
169
A
ARG
170
n
170
ARG
170
A
VAL
171
n
171
VAL
171
A
ASN
172
n
172
ASN
172
A
GLU
173
n
173
GLU
173
A
ASN
174
n
174
ASN
174
A
THR
175
n
175
THR
175
A
ASP
176
n
176
ASP
176
A
CYS
177
n
177
CYS
177
A
VAL
178
n
178
VAL
178
A
VAL
179
n
179
VAL
179
A
THR
180
n
180
THR
180
A
VAL
181
n
181
VAL
181
A
THR
182
n
182
THR
182
A
ASP
183
n
183
ASP
183
A
LEU
184
n
184
LEU
184
A
ALA
185
n
185
ALA
185
A
ASP
186
n
186
ASP
186
A
GLN
187
n
187
GLN
187
A
GLN
188
n
188
GLN
188
A
ALA
189
n
189
ALA
189
A
PHE
190
n
190
PHE
190
A
ALA
191
n
191
ALA
191
A
GLU
192
n
192
GLU
192
A
ALA
193
n
193
ALA
193
A
LEU
194
n
194
LEU
194
A
ALA
195
n
195
ALA
195
A
SER
196
n
196
SER
196
A
ALA
197
n
197
ALA
197
A
ASP
198
n
198
ASP
198
A
ILE
199
n
199
ILE
199
A
LEU
200
n
200
LEU
200
A
THR
201
n
201
THR
201
A
ASN
202
n
202
ASN
202
A
GLY
203
n
203
GLY
203
A
THR
204
n
204
THR
204
A
LYS
205
n
205
LYS
205
A
VAL
206
n
206
VAL
206
A
GLY
207
n
207
GLY
207
A
MSE
208
n
208
MSE
208
A
LYS
209
n
209
LYS
209
A
PRO
210
n
210
PRO
210
A
LEU
211
n
211
LEU
211
A
GLU
212
n
212
GLU
212
A
ASN
213
n
213
ASN
213
A
GLU
214
n
214
GLU
214
A
SER
215
n
215
SER
215
A
LEU
216
n
216
LEU
216
A
VAL
217
n
217
VAL
217
A
ASN
218
n
218
ASN
218
A
ASP
219
n
219
ASP
219
A
ILE
220
n
220
ILE
220
A
SER
221
n
221
SER
221
A
LEU
222
n
222
LEU
222
A
LEU
223
n
223
LEU
223
A
HIS
224
n
224
HIS
224
A
PRO
225
n
225
PRO
225
A
GLY
226
n
226
GLY
226
A
LEU
227
n
227
LEU
227
A
LEU
228
n
228
LEU
228
A
VAL
229
n
229
VAL
229
A
THR
230
n
230
THR
230
A
GLU
231
n
231
GLU
231
A
CYS
232
n
232
CYS
232
A
VAL
233
n
233
VAL
233
A
TYR
234
n
234
TYR
234
A
ASN
235
n
235
ASN
235
A
PRO
236
n
236
PRO
236
A
HIS
237
n
237
HIS
237
A
MSE
238
n
238
MSE
238
A
THR
239
n
239
THR
239
A
LYS
240
n
240
LYS
240
A
LEU
241
n
241
LEU
241
A
LEU
242
n
242
LEU
242
A
GLN
243
n
243
GLN
243
A
GLN
244
n
244
GLN
244
A
ALA
245
n
245
ALA
245
A
GLN
246
n
246
GLN
246
A
GLN
247
n
247
GLN
247
A
ALA
248
n
248
ALA
248
A
GLY
249
n
249
GLY
249
A
CYS
250
n
250
CYS
250
A
LYS
251
n
251
LYS
251
A
THR
252
n
252
THR
252
A
ILE
253
n
253
ILE
253
A
ASP
254
n
254
ASP
254
A
GLY
255
n
255
GLY
255
A
TYR
256
n
256
TYR
256
A
GLY
257
n
257
GLY
257
A
MSE
258
n
258
MSE
258
A
LEU
259
n
259
LEU
259
A
LEU
260
n
260
LEU
260
A
TRP
261
n
261
TRP
261
A
GLN
262
n
262
GLN
262
A
GLY
263
n
263
GLY
263
A
ALA
264
n
264
ALA
264
A
GLU
265
n
265
GLU
265
A
GLN
266
n
266
GLN
266
A
PHE
267
n
267
PHE
267
A
THR
268
n
268
THR
268
A
LEU
269
n
269
LEU
269
A
TRP
270
n
270
TRP
270
A
THR
271
n
271
THR
271
A
GLY
272
n
272
GLY
272
A
LYS
273
n
273
LYS
273
A
ASP
274
n
274
ASP
274
A
PHE
275
n
275
PHE
275
A
PRO
276
n
276
PRO
276
A
LEU
277
n
277
LEU
277
A
GLU
278
n
278
GLU
278
A
TYR
279
n
279
TYR
279
A
VAL
280
n
280
VAL
280
A
LYS
281
n
281
LYS
281
A
GLN
282
n
282
GLN
282
A
VAL
283
n
283
VAL
283
A
MSE
284
n
284
MSE
284
A
GLY
285
n
285
GLY
285
A
PHE
286
n
286
PHE
286
A
GLY
287
n
287
GLY
287
A
n
288
288
A
n
1
1
B
n
2
2
B
n
3
3
B
n
4
4
B
n
5
5
B
n
6
6
B
TYR
7
n
7
TYR
7
B
GLU
8
n
8
GLU
8
B
LEU
9
n
9
LEU
9
B
ILE
10
n
10
ILE
10
B
GLY
11
n
11
GLY
11
B
LEU
12
n
12
LEU
12
B
MSE
13
n
13
MSE
13
B
ALA
14
n
14
ALA
14
B
TYR
15
n
15
TYR
15
B
PRO
16
n
16
PRO
16
B
ILE
17
n
17
ILE
17
B
ARG
18
n
18
ARG
18
B
HIS
19
n
19
HIS
19
B
SER
20
n
20
SER
20
B
LEU
21
n
21
LEU
21
B
SER
22
n
22
SER
22
B
PRO
23
n
23
PRO
23
B
GLU
24
n
24
GLU
24
B
MSE
25
n
25
MSE
25
B
GLN
26
n
26
GLN
26
B
ASN
27
n
27
ASN
27
B
LYS
28
n
28
LYS
28
B
ALA
29
n
29
ALA
29
B
LEU
30
n
30
LEU
30
B
GLU
31
n
31
GLU
31
B
LYS
32
n
32
LYS
32
B
ALA
33
n
33
ALA
33
B
GLY
34
n
34
GLY
34
B
LEU
35
n
35
LEU
35
B
PRO
36
n
36
PRO
36
B
PHE
37
n
37
PHE
37
B
THR
38
n
38
THR
38
B
TYR
39
n
39
TYR
39
B
MSE
40
n
40
MSE
40
B
ALA
41
n
41
ALA
41
B
PHE
42
n
42
PHE
42
B
GLU
43
n
43
GLU
43
B
VAL
44
n
44
VAL
44
B
ASP
45
n
45
ASP
45
B
ASN
46
n
46
ASN
46
B
ASP
47
n
47
ASP
47
B
SER
48
n
48
SER
48
B
PHE
49
n
49
PHE
49
B
PRO
50
n
50
PRO
50
B
GLY
51
n
51
GLY
51
B
ALA
52
n
52
ALA
52
B
ILE
53
n
53
ILE
53
B
GLU
54
n
54
GLU
54
B
GLY
55
n
55
GLY
55
B
LEU
56
n
56
LEU
56
B
LYS
57
n
57
LYS
57
B
ALA
58
n
58
ALA
58
B
LEU
59
n
59
LEU
59
B
LYS
60
n
60
LYS
60
B
MSE
61
n
61
MSE
61
B
ARG
62
n
62
ARG
62
B
GLY
63
n
63
GLY
63
B
THR
64
n
64
THR
64
B
GLY
65
n
65
GLY
65
B
VAL
66
n
66
VAL
66
B
SER
67
n
67
SER
67
B
MSE
68
n
68
MSE
68
B
PRO
69
n
69
PRO
69
B
ASN
70
n
70
ASN
70
B
LYS
71
n
71
LYS
71
B
GLN
72
n
72
GLN
72
B
LEU
73
n
73
LEU
73
B
ALA
74
n
74
ALA
74
B
CYS
75
n
75
CYS
75
B
GLU
76
n
76
GLU
76
B
TYR
77
n
77
TYR
77
B
VAL
78
n
78
VAL
78
B
ASP
79
n
79
ASP
79
B
GLU
80
n
80
GLU
80
B
LEU
81
n
81
LEU
81
B
THR
82
n
82
THR
82
B
PRO
83
n
83
PRO
83
B
ALA
84
n
84
ALA
84
B
ALA
85
n
85
ALA
85
B
LYS
86
n
86
LYS
86
B
LEU
87
n
87
LEU
87
B
VAL
88
n
88
VAL
88
B
GLY
89
n
89
GLY
89
B
ALA
90
n
90
ALA
90
B
ILE
91
n
91
ILE
91
B
ASN
92
n
92
ASN
92
B
THR
93
n
93
THR
93
B
ILE
94
n
94
ILE
94
B
VAL
95
n
95
VAL
95
B
ASN
96
n
96
ASN
96
B
ASP
97
n
97
ASP
97
B
ASP
98
n
98
ASP
98
B
GLY
99
n
99
GLY
99
B
TYR
100
n
100
TYR
100
B
LEU
101
n
101
LEU
101
B
ARG
102
n
102
ARG
102
B
GLY
103
n
103
GLY
103
B
TYR
104
n
104
TYR
104
B
ASN
105
n
105
ASN
105
B
THR
106
n
106
THR
106
B
ASP
107
n
107
ASP
107
B
GLY
108
n
108
GLY
108
B
THR
109
n
109
THR
109
B
GLY
110
n
110
GLY
110
B
HIS
111
n
111
HIS
111
B
ILE
112
n
112
ILE
112
B
ARG
113
n
113
ARG
113
B
ALA
114
n
114
ALA
114
B
ILE
115
n
115
ILE
115
B
LYS
116
n
116
LYS
116
B
GLU
117
n
117
GLU
117
B
SER
118
n
118
SER
118
B
GLY
119
n
119
GLY
119
B
PHE
120
n
120
PHE
120
B
ASP
121
n
121
ASP
121
B
ILE
122
n
122
ILE
122
B
LYS
123
n
123
LYS
123
B
GLY
124
n
124
GLY
124
B
LYS
125
n
125
LYS
125
B
THR
126
n
126
THR
126
B
MSE
127
n
127
MSE
127
B
VAL
128
n
128
VAL
128
B
LEU
129
n
129
LEU
129
B
LEU
130
n
130
LEU
130
B
GLY
131
n
131
GLY
131
B
ALA
132
n
132
ALA
132
B
GLY
133
n
133
GLY
133
B
GLY
134
n
134
GLY
134
B
ALA
135
n
135
ALA
135
B
SER
136
n
136
SER
136
B
THR
137
n
137
THR
137
B
ALA
138
n
138
ALA
138
B
ILE
139
n
139
ILE
139
B
GLY
140
n
140
GLY
140
B
ALA
141
n
141
ALA
141
B
GLN
142
n
142
GLN
142
B
GLY
143
n
143
GLY
143
B
ALA
144
n
144
ALA
144
B
ILE
145
n
145
ILE
145
B
GLU
146
n
146
GLU
146
B
GLY
147
n
147
GLY
147
B
LEU
148
n
148
LEU
148
B
LYS
149
n
149
LYS
149
B
GLU
150
n
150
GLU
150
B
ILE
151
n
151
ILE
151
B
LYS
152
n
152
LYS
152
B
LEU
153
n
153
LEU
153
B
PHE
154
n
154
PHE
154
B
ASN
155
n
155
ASN
155
B
ARG
156
n
156
ARG
156
B
ARG
157
n
157
ARG
157
B
ASP
158
n
158
ASP
158
B
GLU
159
n
159
GLU
159
B
PHE
160
n
160
PHE
160
B
PHE
161
n
161
PHE
161
B
ASP
162
n
162
ASP
162
B
LYS
163
n
163
LYS
163
B
ALA
164
n
164
ALA
164
B
LEU
165
n
165
LEU
165
B
ALA
166
n
166
ALA
166
B
PHE
167
n
167
PHE
167
B
ALA
168
n
168
ALA
168
B
GLN
169
n
169
GLN
169
B
ARG
170
n
170
ARG
170
B
VAL
171
n
171
VAL
171
B
ASN
172
n
172
ASN
172
B
GLU
173
n
173
GLU
173
B
ASN
174
n
174
ASN
174
B
THR
175
n
175
THR
175
B
ASP
176
n
176
ASP
176
B
CYS
177
n
177
CYS
177
B
VAL
178
n
178
VAL
178
B
VAL
179
n
179
VAL
179
B
THR
180
n
180
THR
180
B
VAL
181
n
181
VAL
181
B
THR
182
n
182
THR
182
B
ASP
183
n
183
ASP
183
B
LEU
184
n
184
LEU
184
B
ALA
185
n
185
ALA
185
B
ASP
186
n
186
ASP
186
B
GLN
187
n
187
GLN
187
B
GLN
188
n
188
GLN
188
B
ALA
189
n
189
ALA
189
B
PHE
190
n
190
PHE
190
B
ALA
191
n
191
ALA
191
B
GLU
192
n
192
GLU
192
B
ALA
193
n
193
ALA
193
B
LEU
194
n
194
LEU
194
B
ALA
195
n
195
ALA
195
B
SER
196
n
196
SER
196
B
ALA
197
n
197
ALA
197
B
ASP
198
n
198
ASP
198
B
ILE
199
n
199
ILE
199
B
LEU
200
n
200
LEU
200
B
THR
201
n
201
THR
201
B
ASN
202
n
202
ASN
202
B
GLY
203
n
203
GLY
203
B
THR
204
n
204
THR
204
B
LYS
205
n
205
LYS
205
B
VAL
206
n
206
VAL
206
B
GLY
207
n
207
GLY
207
B
MSE
208
n
208
MSE
208
B
LYS
209
n
209
LYS
209
B
PRO
210
n
210
PRO
210
B
LEU
211
n
211
LEU
211
B
GLU
212
n
212
GLU
212
B
ASN
213
n
213
ASN
213
B
GLU
214
n
214
GLU
214
B
SER
215
n
215
SER
215
B
LEU
216
n
216
LEU
216
B
VAL
217
n
217
VAL
217
B
ASN
218
n
218
ASN
218
B
ASP
219
n
219
ASP
219
B
ILE
220
n
220
ILE
220
B
SER
221
n
221
SER
221
B
LEU
222
n
222
LEU
222
B
LEU
223
n
223
LEU
223
B
HIS
224
n
224
HIS
224
B
PRO
225
n
225
PRO
225
B
GLY
226
n
226
GLY
226
B
LEU
227
n
227
LEU
227
B
LEU
228
n
228
LEU
228
B
VAL
229
n
229
VAL
229
B
THR
230
n
230
THR
230
B
GLU
231
n
231
GLU
231
B
CYS
232
n
232
CYS
232
B
VAL
233
n
233
VAL
233
B
TYR
234
n
234
TYR
234
B
ASN
235
n
235
ASN
235
B
PRO
236
n
236
PRO
236
B
HIS
237
n
237
HIS
237
B
MSE
238
n
238
MSE
238
B
THR
239
n
239
THR
239
B
LYS
240
n
240
LYS
240
B
LEU
241
n
241
LEU
241
B
LEU
242
n
242
LEU
242
B
GLN
243
n
243
GLN
243
B
GLN
244
n
244
GLN
244
B
ALA
245
n
245
ALA
245
B
GLN
246
n
246
GLN
246
B
GLN
247
n
247
GLN
247
B
ALA
248
n
248
ALA
248
B
GLY
249
n
249
GLY
249
B
CYS
250
n
250
CYS
250
B
LYS
251
n
251
LYS
251
B
THR
252
n
252
THR
252
B
ILE
253
n
253
ILE
253
B
ASP
254
n
254
ASP
254
B
GLY
255
n
255
GLY
255
B
TYR
256
n
256
TYR
256
B
GLY
257
n
257
GLY
257
B
MSE
258
n
258
MSE
258
B
LEU
259
n
259
LEU
259
B
LEU
260
n
260
LEU
260
B
TRP
261
n
261
TRP
261
B
GLN
262
n
262
GLN
262
B
GLY
263
n
263
GLY
263
B
ALA
264
n
264
ALA
264
B
GLU
265
n
265
GLU
265
B
GLN
266
n
266
GLN
266
B
PHE
267
n
267
PHE
267
B
THR
268
n
268
THR
268
B
LEU
269
n
269
LEU
269
B
TRP
270
n
270
TRP
270
B
THR
271
n
271
THR
271
B
GLY
272
n
272
GLY
272
B
LYS
273
n
273
LYS
273
B
ASP
274
n
274
ASP
274
B
PHE
275
n
275
PHE
275
B
PRO
276
n
276
PRO
276
B
LEU
277
n
277
LEU
277
B
GLU
278
n
278
GLU
278
B
TYR
279
n
279
TYR
279
B
VAL
280
n
280
VAL
280
B
LYS
281
n
281
LYS
281
B
GLN
282
n
282
GLN
282
B
VAL
283
n
283
VAL
283
B
MSE
284
n
284
MSE
284
B
GLY
285
n
285
GLY
285
B
PHE
286
n
286
PHE
286
B
GLY
287
n
287
GLY
287
B
n
288
288
B
author_and_software_defined_assembly
PQS
1
monomeric
author_and_software_defined_assembly
PQS
1
monomeric
A
MSE
13
SELENOMETHIONINE
A
MSE
13
MET
A
MSE
25
SELENOMETHIONINE
A
MSE
25
MET
A
MSE
40
SELENOMETHIONINE
A
MSE
40
MET
A
MSE
61
SELENOMETHIONINE
A
MSE
61
MET
A
MSE
68
SELENOMETHIONINE
A
MSE
68
MET
A
MSE
127
SELENOMETHIONINE
A
MSE
127
MET
A
MSE
208
SELENOMETHIONINE
A
MSE
208
MET
A
MSE
238
SELENOMETHIONINE
A
MSE
238
MET
A
MSE
258
SELENOMETHIONINE
A
MSE
258
MET
A
MSE
284
SELENOMETHIONINE
A
MSE
284
MET
B
MSE
13
SELENOMETHIONINE
B
MSE
13
MET
B
MSE
25
SELENOMETHIONINE
B
MSE
25
MET
B
MSE
40
SELENOMETHIONINE
B
MSE
40
MET
B
MSE
61
SELENOMETHIONINE
B
MSE
61
MET
B
MSE
68
SELENOMETHIONINE
B
MSE
68
MET
B
MSE
127
SELENOMETHIONINE
B
MSE
127
MET
B
MSE
208
SELENOMETHIONINE
B
MSE
208
MET
B
MSE
238
SELENOMETHIONINE
B
MSE
238
MET
B
MSE
258
SELENOMETHIONINE
B
MSE
258
MET
B
MSE
284
SELENOMETHIONINE
B
MSE
284
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
THR
38
A
N
THR
38
A
O
GLU
8
A
O
GLU
8
A
N
GLY
11
A
N
GLY
11
A
O
GLY
63
A
O
GLY
63
A
N
THR
64
A
N
THR
64
A
O
ILE
94
A
O
ILE
94
A
N
ASP
97
A
N
ASP
97
A
O
TYR
100
A
O
TYR
100
A
N
THR
180
A
N
THR
180
A
O
ILE
151
A
O
ILE
151
A
N
LYS
152
A
N
LYS
152
A
O
MSE
127
A
O
MSE
127
A
N
VAL
128
A
N
VAL
128
A
O
ILE
199
A
O
ILE
199
A
N
LEU
200
A
N
LEU
200
A
O
LEU
228
A
O
LEU
228
A
N
VAL
229
A
N
VAL
229
A
O
LYS
251
A
O
LYS
251
B
N
THR
38
B
N
THR
38
B
O
GLU
8
B
O
GLU
8
B
N
GLY
11
B
N
GLY
11
B
O
GLY
63
B
O
GLY
63
B
N
THR
64
B
N
THR
64
B
O
ILE
94
B
O
ILE
94
B
N
ASP
97
B
N
ASP
97
B
O
TYR
100
B
O
TYR
100
B
N
GLY
103
B
N
GLY
103
B
O
GLU
80
B
O
GLU
80
B
N
THR
180
B
N
THR
180
B
O
ILE
151
B
O
ILE
151
B
N
LYS
152
B
N
LYS
152
B
O
MSE
127
B
O
MSE
127
B
N
VAL
128
B
N
VAL
128
B
O
ILE
199
B
O
ILE
199
B
N
LEU
200
B
N
LEU
200
B
O
LEU
228
B
O
LEU
228
B
N
VAL
229
B
N
VAL
229
B
O
LYS
251
B
O
LYS
251
1
A
CE1
TYR
15
A
CE1
TYR
15
0
Y
1
A
CE2
TYR
15
A
CE2
TYR
15
0
Y
1
A
CZ
TYR
15
A
CZ
TYR
15
0
Y
1
A
OH
TYR
15
A
OH
TYR
15
0
Y
1
A
CG
HIS
19
A
CG
HIS
19
0
Y
1
A
ND1
HIS
19
A
ND1
HIS
19
0
Y
1
A
CD2
HIS
19
A
CD2
HIS
19
0
Y
1
A
CE1
HIS
19
A
CE1
HIS
19
0
Y
1
A
NE2
HIS
19
A
NE2
HIS
19
0
Y
1
A
CE
LYS
57
A
CE
LYS
57
0
Y
1
A
NZ
LYS
57
A
NZ
LYS
57
0
Y
1
A
CE
LYS
60
A
CE
LYS
60
0
Y
1
A
NZ
LYS
60
A
NZ
LYS
60
0
Y
1
A
CE
LYS
86
A
CE
LYS
86
0
Y
1
A
NZ
LYS
86
A
NZ
LYS
86
0
Y
1
A
CB
ALA
132
A
CB
ALA
132
0
Y
1
A
CA
ARG
157
A
CA
ARG
157
0
Y
1
A
CB
ARG
157
A
CB
ARG
157
0
Y
1
A
CG
ARG
157
A
CG
ARG
157
0
Y
1
A
CD
ARG
157
A
CD
ARG
157
0
Y
1
A
NE
ARG
157
A
NE
ARG
157
0
Y
1
A
CG
ASP
158
A
CG
ASP
158
0
Y
1
A
OD1
ASP
158
A
OD1
ASP
158
0
Y
1
A
OD2
ASP
158
A
OD2
ASP
158
0
Y
1
A
CG
GLN
169
A
CG
GLN
169
0
Y
1
A
CD
GLN
169
A
CD
GLN
169
0
Y
1
A
OE1
GLN
169
A
OE1
GLN
169
0
Y
1
A
NE2
GLN
169
A
NE2
GLN
169
0
Y
1
A
CG1
VAL
181
A
CG1
VAL
181
0
Y
1
A
CG2
VAL
181
A
CG2
VAL
181
0
Y
1
A
CG
ASP
183
A
CG
ASP
183
0
Y
1
A
OD1
ASP
183
A
OD1
ASP
183
0
Y
1
A
OD2
ASP
183
A
OD2
ASP
183
0
Y
1
A
CG
LEU
184
A
CG
LEU
184
0
Y
1
A
CD1
LEU
184
A
CD1
LEU
184
0
Y
1
A
CD2
LEU
184
A
CD2
LEU
184
0
Y
1
A
CB
ALA
185
A
CB
ALA
185
0
Y
1
A
CG
GLN
187
A
CG
GLN
187
0
Y
1
A
CD
GLN
187
A
CD
GLN
187
0
Y
1
A
OE1
GLN
187
A
OE1
GLN
187
0
Y
1
A
NE2
GLN
187
A
NE2
GLN
187
0
Y
1
A
C
PRO
210
A
C
PRO
210
0
Y
1
A
CB
PRO
210
A
CB
PRO
210
0
Y
1
A
CG
PRO
210
A
CG
PRO
210
0
Y
1
A
CD1
LEU
211
A
CD1
LEU
211
0
Y
1
A
CD2
LEU
211
A
CD2
LEU
211
0
Y
1
A
CG
GLU
212
A
CG
GLU
212
0
Y
1
A
CD
GLU
212
A
CD
GLU
212
0
Y
1
A
OE1
GLU
212
A
OE1
GLU
212
0
Y
1
A
OE2
GLU
212
A
OE2
GLU
212
0
Y
1
A
CB
ASN
235
A
CB
ASN
235
0
Y
1
A
CG
ASN
235
A
CG
ASN
235
0
Y
1
A
OD1
ASN
235
A
OD1
ASN
235
0
Y
1
A
ND2
ASN
235
A
ND2
ASN
235
0
Y
1
A
CG
GLN
247
A
CG
GLN
247
0
Y
1
A
CD
GLN
247
A
CD
GLN
247
0
Y
1
A
OE1
GLN
247
A
OE1
GLN
247
0
Y
1
A
NE2
GLN
247
A
NE2
GLN
247
0
Y
1
A
CA
GLY
287
A
CA
GLY
287
1
Y
1
A
C
GLY
287
A
C
GLY
287
1
Y
1
A
O
GLY
287
A
O
GLY
287
1
Y
1
B
OH
TYR
15
B
OH
TYR
15
0
Y
1
B
CG
HIS
19
B
CG
HIS
19
0
Y
1
B
ND1
HIS
19
B
ND1
HIS
19
0
Y
1
B
CD2
HIS
19
B
CD2
HIS
19
0
Y
1
B
CE1
HIS
19
B
CE1
HIS
19
0
Y
1
B
NE2
HIS
19
B
NE2
HIS
19
0
Y
1
B
CD
LYS
209
B
CD
LYS
209
0
Y
1
B
CE
LYS
209
B
CE
LYS
209
0
Y
1
B
NZ
LYS
209
B
NZ
LYS
209
0
Y
1
B
CG
GLU
214
B
CG
GLU
214
0
Y
1
B
CD
GLU
214
B
CD
GLU
214
0
Y
1
B
OE1
GLU
214
B
OE1
GLU
214
0
Y
1
B
OE2
GLU
214
B
OE2
GLU
214
0
Y
1
B
CD
GLN
247
B
CD
GLN
247
0
Y
1
B
OE1
GLN
247
B
OE1
GLN
247
0
Y
1
B
NE2
GLN
247
B
NE2
GLN
247
0
Y
1
B
CA
GLY
287
B
CA
GLY
287
1
Y
1
B
C
GLY
287
B
C
GLY
287
1
Y
1
B
O
GLY
287
B
O
GLY
287
1
Y
1
A
MSE
1
A
MSE
1
1
Y
1
A
ASP
2
A
ASP
2
1
Y
1
A
VAL
3
A
VAL
3
1
Y
1
A
THR
4
A
THR
4
1
Y
1
A
ALA
5
A
ALA
5
1
Y
1
A
LYS
6
A
LYS
6
1
Y
1
A
ALA
288
A
ALA
288
1
Y
1
B
MSE
1
B
MSE
1
1
Y
1
B
ASP
2
B
ASP
2
1
Y
1
B
VAL
3
B
VAL
3
1
Y
1
B
THR
4
B
THR
4
1
Y
1
B
ALA
5
B
ALA
5
1
Y
1
B
LYS
6
B
LYS
6
1
Y
1
B
ALA
288
B
ALA
288
1
Y
1
A
LYS
209
-35.41
1
-20.18
1.90
121.10
100.92
A
A
A
O
C
N
LYS
LYS
PRO
209
209
210
Y
1
A
TYR
15
-161.93
114.32
1
A
LYS
32
-71.87
46.85
1
A
ALA
33
-169.71
1.64
1
A
ALA
90
-178.49
145.36
1
A
ALA
132
-157.42
13.82
1
A
GLN
187
-41.23
-3.44
1
A
GLN
188
-109.77
-63.28
1
A
LEU
211
-62.48
41.31
1
A
ASN
213
-144.43
46.40
1
A
PRO
236
-77.78
-156.02
1
A
GLN
246
-48.55
-19.25
1
A
GLN
247
-66.35
-79.36
1
A
ALA
248
-52.54
-0.54
1
A
GLN
282
-54.37
-71.27
1
B
TYR
15
-164.31
116.67
1
B
ILE
17
-142.54
-25.90
1
B
ARG
18
-48.52
-16.84
1
B
PRO
36
-76.33
49.23
1
B
ALA
90
-170.11
138.01
1
B
ASP
97
-107.29
74.13
1
B
ALA
132
-157.86
27.96
1
B
GLU
146
-92.58
36.33
1
B
ASN
155
-172.45
126.47
1
B
ASP
158
-132.66
-159.96
1
B
GLU
192
-71.02
-78.50
1
B
ALA
193
-35.92
-36.03
1
B
LEU
211
-107.63
50.83
1
B
SER
221
-93.22
34.54
1
B
PRO
225
-58.34
-86.98
1
B
ASN
235
174.32
111.01
1
B
PHE
286
-113.92
58.92
PROTEIN_REP.PARAM
PROTEIN.TOP
ION.PARAM
ION.TOP
WATER_REP.PARAM
WATER.TOP
NAD.PAR
NAD.TOP
49.1
-1.85
4.10
0.00
-1.85
0.00
3.70
0.294
0.009
0.226
0.226
2.50
19.80
972
20116
4.8
99.9
RANDOM
1887922.36
1
RESTRAINED
THROUGHOUT
0.0
MAD
FLAT MODEL
57.8041
0.313499
0.47
0.33
5.00
0.50
0.30
2.50
19.80
154
4541
113
0
4274
0.011
1.6
24.7
0.92
0.372
0.029
0.267
2.66
162
3139
6
4.9
100.0
31.2
2.500
20.000
1O9B
38407
0.000
1
25.5000
3.880
99.7
2.50
2.59
7.200
1
100.0
refinement
CNS
1.0
data reduction
DENZO
data scaling
SCALEPACK
phasing
CNS
HYPOTHETICAL SHIKIMATE 5-DEHYDROGENASE-LIKE PROTEIN YDIB (E.C.1.1.1.25)
QUINATE/SHIKIMATE DEHYDROGENASE YDIB COMPLEXED WITH NADH
1
N
N
1
N
N
2
N
N
3
N
N
3
N
N
3
N
N
2
N
N
3
N
N
3
N
N
4
N
N
4
N
N
A
LEU
21
A
LEU
21
HELX_P
A
LYS
32
A
LYS
32
1
1
12
A
SER
48
A
SER
48
HELX_P
A
LEU
59
A
LEU
59
1
2
12
A
GLN
72
A
GLN
72
HELX_P
A
VAL
78
A
VAL
78
5
3
7
A
THR
82
A
THR
82
HELX_P
A
GLY
89
A
GLY
89
1
4
8
A
ASN
105
A
ASN
105
HELX_P
A
GLU
117
A
GLU
117
1
5
13
A
GLY
133
A
GLY
133
HELX_P
A
GLU
146
A
GLU
146
1
6
14
A
PHE
160
A
PHE
160
HELX_P
A
THR
175
A
THR
175
1
7
16
A
PHE
190
A
PHE
190
HELX_P
A
ALA
197
A
ALA
197
1
8
8
A
THR
239
A
THR
239
HELX_P
A
GLY
249
A
GLY
249
1
9
11
A
ASP
254
A
ASP
254
HELX_P
A
GLY
272
A
GLY
272
1
10
19
A
PRO
276
A
PRO
276
HELX_P
A
MSE
284
A
MSE
284
1
11
9
B
LEU
21
B
LEU
21
HELX_P
B
ALA
33
B
ALA
33
1
12
13
B
SER
48
B
SER
48
HELX_P
B
LEU
59
B
LEU
59
1
13
12
B
ASN
70
B
ASN
70
HELX_P
B
CYS
75
B
CYS
75
1
14
6
B
THR
82
B
THR
82
HELX_P
B
GLY
89
B
GLY
89
1
15
8
B
ASN
105
B
ASN
105
HELX_P
B
GLU
117
B
GLU
117
1
16
13
B
GLY
133
B
GLY
133
HELX_P
B
GLU
146
B
GLU
146
1
17
14
B
GLU
159
B
GLU
159
HELX_P
B
THR
175
B
THR
175
1
18
17
B
ASP
186
B
ASP
186
HELX_P
B
SER
196
B
SER
196
1
19
11
B
THR
239
B
THR
239
HELX_P
B
GLN
246
B
GLN
246
1
20
8
B
ASP
254
B
ASP
254
HELX_P
B
GLY
272
B
GLY
272
1
21
19
B
PRO
276
B
PRO
276
HELX_P
B
MSE
284
B
MSE
284
1
22
9
covale
1.328
A
LEU
12
A
C
LEU
12
1_555
A
MSE
13
A
N
MSE
13
1_555
covale
1.327
A
MSE
13
A
C
MSE
13
1_555
A
ALA
14
A
N
ALA
14
1_555
covale
1.326
A
GLU
24
A
C
GLU
24
1_555
A
MSE
25
A
N
MSE
25
1_555
covale
1.333
A
MSE
25
A
C
MSE
25
1_555
A
GLN
26
A
N
GLN
26
1_555
covale
1.325
A
TYR
39
A
C
TYR
39
1_555
A
MSE
40
A
N
MSE
40
1_555
covale
1.322
A
MSE
40
A
C
MSE
40
1_555
A
ALA
41
A
N
ALA
41
1_555
covale
1.332
A
LYS
60
A
C
LYS
60
1_555
A
MSE
61
A
N
MSE
61
1_555
covale
1.326
A
MSE
61
A
C
MSE
61
1_555
A
ARG
62
A
N
ARG
62
1_555
covale
1.322
A
SER
67
A
C
SER
67
1_555
A
MSE
68
A
N
MSE
68
1_555
covale
1.341
A
MSE
68
A
C
MSE
68
1_555
A
PRO
69
A
N
PRO
69
1_555
covale
1.330
A
THR
126
A
C
THR
126
1_555
A
MSE
127
A
N
MSE
127
1_555
covale
1.323
A
MSE
127
A
C
MSE
127
1_555
A
VAL
128
A
N
VAL
128
1_555
covale
1.334
A
GLY
207
A
C
GLY
207
1_555
A
MSE
208
A
N
MSE
208
1_555
covale
1.352
A
MSE
208
A
C
MSE
208
1_555
A
LYS
209
A
N
LYS
209
1_555
covale
1.334
A
HIS
237
A
C
HIS
237
1_555
A
MSE
238
A
N
MSE
238
1_555
covale
1.326
A
MSE
238
A
C
MSE
238
1_555
A
THR
239
A
N
THR
239
1_555
covale
1.326
A
GLY
257
A
C
GLY
257
1_555
A
MSE
258
A
N
MSE
258
1_555
covale
1.326
A
MSE
258
A
C
MSE
258
1_555
A
LEU
259
A
N
LEU
259
1_555
covale
1.331
A
VAL
283
A
C
VAL
283
1_555
A
MSE
284
A
N
MSE
284
1_555
covale
1.325
A
MSE
284
A
C
MSE
284
1_555
A
GLY
285
A
N
GLY
285
1_555
covale
1.333
B
LEU
12
B
C
LEU
12
1_555
B
MSE
13
B
N
MSE
13
1_555
covale
1.328
B
MSE
13
B
C
MSE
13
1_555
B
ALA
14
B
N
ALA
14
1_555
covale
1.325
B
GLU
24
B
C
GLU
24
1_555
B
MSE
25
B
N
MSE
25
1_555
covale
1.332
B
MSE
25
B
C
MSE
25
1_555
B
GLN
26
B
N
GLN
26
1_555
covale
1.323
B
TYR
39
B
C
TYR
39
1_555
B
MSE
40
B
N
MSE
40
1_555
covale
1.322
B
MSE
40
B
C
MSE
40
1_555
B
ALA
41
B
N
ALA
41
1_555
covale
1.329
B
LYS
60
B
C
LYS
60
1_555
B
MSE
61
B
N
MSE
61
1_555
covale
1.329
B
MSE
61
B
C
MSE
61
1_555
B
ARG
62
B
N
ARG
62
1_555
covale
1.329
B
SER
67
B
C
SER
67
1_555
B
MSE
68
B
N
MSE
68
1_555
covale
1.339
B
MSE
68
B
C
MSE
68
1_555
B
PRO
69
B
N
PRO
69
1_555
covale
1.334
B
THR
126
B
C
THR
126
1_555
B
MSE
127
B
N
MSE
127
1_555
covale
1.325
B
MSE
127
B
C
MSE
127
1_555
B
VAL
128
B
N
VAL
128
1_555
covale
1.339
B
GLY
207
B
C
GLY
207
1_555
B
MSE
208
B
N
MSE
208
1_555
covale
1.332
B
MSE
208
B
C
MSE
208
1_555
B
LYS
209
B
N
LYS
209
1_555
covale
1.331
B
HIS
237
B
C
HIS
237
1_555
B
MSE
238
B
N
MSE
238
1_555
covale
1.328
B
MSE
238
B
C
MSE
238
1_555
B
THR
239
B
N
THR
239
1_555
covale
1.330
B
GLY
257
B
C
GLY
257
1_555
B
MSE
258
B
N
MSE
258
1_555
covale
1.326
B
MSE
258
B
C
MSE
258
1_555
B
LEU
259
B
N
LEU
259
1_555
covale
1.327
B
VAL
283
B
C
VAL
283
1_555
B
MSE
284
B
N
MSE
284
1_555
covale
1.330
B
MSE
284
B
C
MSE
284
1_555
B
GLY
285
B
N
GLY
285
1_555
OXIDOREDUCTASE
OXIDOREDUCTASE, QUINATE, SHIKIMATE, NAD, MONTREAL-KINGSTON BACTERIAL STRUCTURAL GENOMICS INITIATIVE, BSGI, STRUCTURAL GENOMICS
A
TYR
15
A
TYR
15
1
A
PRO
16
A
PRO
16
-5.23
A
MSE
68
A
MSE
68
1
A
PRO
69
A
PRO
69
1.65
A
LYS
209
A
LYS
209
1
A
PRO
210
A
PRO
210
-0.08
A
ASN
235
A
ASN
235
1
A
PRO
236
A
PRO
236
-0.09
B
TYR
15
B
TYR
15
1
B
PRO
16
B
PRO
16
0.14
B
MSE
68
B
MSE
68
1
B
PRO
69
B
PRO
69
0.84
B
LYS
209
B
LYS
209
1
B
PRO
210
B
PRO
210
0.14
B
ASN
235
B
ASN
235
1
B
PRO
236
B
PRO
236
0.38
given
-0.982750
-0.065340
-0.173020
0.107990
-0.962200
-0.250020
-0.150150
-0.264390
0.952660
238.74544
81.28804
30.46164
YDIB_ECOLI
UNP
1
P28244
1
288
1O9B
1
288
P28244
A
1
1
288
1
288
1O9B
1
288
P28244
B
1
1
288
5
6
6
6
parallel
parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
parallel
A
PHE
37
A
PHE
37
A
GLU
43
A
GLU
43
A
GLU
8
A
GLU
8
A
ALA
14
A
ALA
14
A
GLY
63
A
GLY
63
A
VAL
66
A
VAL
66
A
THR
93
A
THR
93
A
ASP
97
A
ASP
97
A
TYR
100
A
TYR
100
A
TYR
104
A
TYR
104
A
VAL
178
A
VAL
178
A
THR
182
A
THR
182
A
GLU
150
A
GLU
150
A
PHE
154
A
PHE
154
A
THR
126
A
THR
126
A
LEU
130
A
LEU
130
A
ILE
199
A
ILE
199
A
ASN
202
A
ASN
202
A
LEU
228
A
LEU
228
A
GLU
231
A
GLU
231
A
LYS
251
A
LYS
251
A
ILE
253
A
ILE
253
B
PHE
37
B
PHE
37
B
GLU
43
B
GLU
43
B
GLU
8
B
GLU
8
B
ALA
14
B
ALA
14
B
GLY
63
B
GLY
63
B
VAL
66
B
VAL
66
B
THR
93
B
THR
93
B
ASP
97
B
ASP
97
B
TYR
100
B
TYR
100
B
TYR
104
B
TYR
104
B
GLU
80
B
GLU
80
B
LEU
81
B
LEU
81
B
VAL
178
B
VAL
178
B
THR
182
B
THR
182
B
GLU
150
B
GLU
150
B
PHE
154
B
PHE
154
B
THR
126
B
THR
126
B
LEU
130
B
LEU
130
B
ILE
199
B
ILE
199
B
ASN
202
B
ASN
202
B
LEU
228
B
LEU
228
B
GLU
231
B
GLU
231
B
LYS
251
B
LYS
251
B
ILE
253
B
ILE
253
BINDING SITE FOR RESIDUE PO4 A 302
Software
5
BINDING SITE FOR RESIDUE PO4 A 303
Software
5
BINDING SITE FOR RESIDUE PO4 A 304
Software
6
BINDING SITE FOR RESIDUE PO4 B 302
Software
5
BINDING SITE FOR RESIDUE PO4 B 303
Software
7
BINDING SITE FOR RESIDUE NAI A 301
Software
19
BINDING SITE FOR RESIDUE NAI B 301
Software
25
A
SER
67
A
SER
67
5
1_555
A
LYS
71
A
LYS
71
5
1_555
A
ASP
107
A
ASP
107
5
1_555
A
NAI
301
C
NAI
5
1_555
A
HOH
2088
J
HOH
5
1_555
A
MSE
68
A
MSE
68
5
1_555
A
PRO
69
A
PRO
69
5
1_555
A
ASN
70
A
ASN
70
5
1_555
A
LYS
71
A
LYS
71
5
1_555
A
GLN
72
A
GLN
72
5
1_555
A
LYS
32
A
LYS
32
6
1_554
A
TYR
100
A
TYR
100
6
1_555
A
LYS
149
A
LYS
149
6
3_664
A
GLU
150
A
GLU
150
6
3_664
A
LYS
152
A
LYS
152
6
3_664
A
SER
196
A
SER
196
6
3_664
B
SER
67
B
SER
67
5
1_555
B
LYS
71
B
LYS
71
5
1_555
B
ASP
107
B
ASP
107
5
1_555
B
NAI
301
G
NAI
5
1_555
B
HOH
2065
K
HOH
5
1_555
B
MSE
68
B
MSE
68
7
1_555
B
PRO
69
B
PRO
69
7
1_555
B
ASN
70
B
ASN
70
7
1_555
B
LYS
71
B
LYS
71
7
1_555
B
GLN
72
B
GLN
72
7
1_555
B
HOH
2062
K
HOH
7
1_555
B
HOH
2066
K
HOH
7
1_555
A
ALA
132
A
ALA
132
19
1_555
A
GLY
133
A
GLY
133
19
1_555
A
GLY
134
A
GLY
134
19
1_555
A
ALA
135
A
ALA
135
19
1_555
A
ASN
155
A
ASN
155
19
1_555
A
ARG
156
A
ARG
156
19
1_555
A
PHE
160
A
PHE
160
19
1_555
A
GLY
203
A
GLY
203
19
1_555
A
THR
204
A
THR
204
19
1_555
A
LYS
205
A
LYS
205
19
1_555
A
VAL
206
A
VAL
206
19
1_555
A
MSE
208
A
MSE
208
19
1_555
A
CYS
232
A
CYS
232
19
1_555
A
TYR
234
A
TYR
234
19
1_555
A
GLY
255
A
GLY
255
19
1_555
A
MSE
258
A
MSE
258
19
1_555
A
LEU
259
A
LEU
259
19
1_555
A
PO4
302
D
PO4
19
1_555
A
HOH
2058
J
HOH
19
1_555
B
ASP
107
B
ASP
107
25
1_555
B
ALA
132
B
ALA
132
25
1_555
B
GLY
133
B
GLY
133
25
1_555
B
GLY
134
B
GLY
134
25
1_555
B
ALA
135
B
ALA
135
25
1_555
B
ASN
155
B
ASN
155
25
1_555
B
ARG
156
B
ARG
156
25
1_555
B
ASP
158
B
ASP
158
25
1_555
B
PHE
160
B
PHE
160
25
1_555
B
GLY
203
B
GLY
203
25
1_555
B
THR
204
B
THR
204
25
1_555
B
LYS
205
B
LYS
205
25
1_555
B
VAL
206
B
VAL
206
25
1_555
B
MSE
208
B
MSE
208
25
1_555
B
CYS
232
B
CYS
232
25
1_555
B
VAL
233
B
VAL
233
25
1_555
B
TYR
234
B
TYR
234
25
1_555
B
GLY
255
B
GLY
255
25
1_555
B
MSE
258
B
MSE
258
25
1_555
B
LEU
259
B
LEU
259
25
1_555
B
PO4
302
H
PO4
25
1_555
B
HOH
2044
K
HOH
25
1_555
B
HOH
2062
K
HOH
25
1_555
B
HOH
2063
K
HOH
25
1_555
B
HOH
2064
K
HOH
25
1_555
172
P 64