0.017039
0.000000
0.000000
0.000000
0.013448
0.000000
0.000000
0.000000
0.012846
0.00000
0.00000
0.00000
Enguita, F.J.
Grenha, R.
Santos, H.
Carrondo, M.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
58.688
74.362
77.842
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C34 H34 Fe N4 O4
618.503
HEME C
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
GW
J.Biol.Inorg.Chem.
JJBCFA
2154
0949-8257
11
189
10.1007/S00775-005-0065-6
16341897
Structural Evidence for a Proton Transfer Pathway Coupled with Haem Reduction of Cytochrome C" from Methylophilus Methylotrophus.
2006
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
110.0
1
CCD
2002-10-15
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
0.811
1.0
X11
EMBL/DESY, HAMBURG
0.811
SYNCHROTRON
EMBL/DESY, HAMBURG BEAMLINE X11
13699.490
CYTOCHROME C"
2
nat
polymer
618.503
HEME C
2
syn
non-polymer
92.094
GLYCEROL
5
syn
non-polymer
96.063
SULFATE ION
6
syn
non-polymer
18.015
water
270
nat
water
no
no
DVTNAEKLVYKYTNIAHSANPMYEAPSITDGKIFFNRKFKTPSGKEAACASCHTNNPANVGKNIVTGKEIPPLAPRVNTK
RFTDIDKVEDEFTKHCNDILGADCSPSEKANFIAYLLTETKPTK
DVTNAEKLVYKYTNIAHSANPMYEAPSITDGKIFFNRKFKTPSGKEAACASCHTNNPANVGKNIVTGKEIPPLAPRVNTK
RFTDIDKVEDEFTKHCNDILGADCSPSEKANFIAYLLTETKPTK
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
17
METHYLOPHILUS METHYLOTROPHUS
2
2.56
51.63
7.00
pH 7.00
diffrn_source
struct_conn
repository
Initial release
Database references
Derived calculations
Other
Version format compliance
Data collection
Derived calculations
1
0
2004-03-26
1
1
2014-10-22
1
2
2019-07-24
_diffrn_source.pdbx_synchrotron_site
_struct_conn.pdbx_leaving_atom_flag
SOLUTION STRUCTURE OF METHYLOPHILUS METHYLOTROPHUS CYTOCHROME C'': INSIGHTS INTO THE STRUCTURAL BASIS OF HAEM-LIGAND DETACHMENT
CRYSTAL STRUCTURE OF OXIDIZED CYTOCHROME C" FROM METHYLOPHILUS METHYLOTROPHUS
PDBE
Y
PDBE
2003-01-09
REL
HEC
HEME C
GOL
GLYCEROL
SO4
SULFATE ION
HOH
water
HEC
1125
2
HEC
HEC
1125
A
GOL
1126
3
GOL
GOL
1126
A
GOL
1127
3
GOL
GOL
1127
A
GOL
1128
3
GOL
GOL
1128
A
SO4
1129
4
SO4
SO4
1129
A
SO4
1130
4
SO4
SO4
1130
A
SO4
1131
4
SO4
SO4
1131
A
HEC
1125
2
HEC
HEC
1125
B
GOL
1126
3
GOL
GOL
1126
B
GOL
1127
3
GOL
GOL
1127
B
SO4
1128
4
SO4
SO4
1128
B
SO4
1129
4
SO4
SO4
1129
B
SO4
1130
4
SO4
SO4
1130
B
HOH
2001
5
HOH
HOH
2001
A
HOH
2002
5
HOH
HOH
2002
A
HOH
2003
5
HOH
HOH
2003
A
HOH
2004
5
HOH
HOH
2004
A
HOH
2005
5
HOH
HOH
2005
A
HOH
2006
5
HOH
HOH
2006
A
HOH
2007
5
HOH
HOH
2007
A
HOH
2008
5
HOH
HOH
2008
A
HOH
2009
5
HOH
HOH
2009
A
HOH
2010
5
HOH
HOH
2010
A
HOH
2011
5
HOH
HOH
2011
A
HOH
2012
5
HOH
HOH
2012
A
HOH
2013
5
HOH
HOH
2013
A
HOH
2014
5
HOH
HOH
2014
A
HOH
2015
5
HOH
HOH
2015
A
HOH
2016
5
HOH
HOH
2016
A
HOH
2017
5
HOH
HOH
2017
A
HOH
2018
5
HOH
HOH
2018
A
HOH
2019
5
HOH
HOH
2019
A
HOH
2020
5
HOH
HOH
2020
A
HOH
2021
5
HOH
HOH
2021
A
HOH
2022
5
HOH
HOH
2022
A
HOH
2023
5
HOH
HOH
2023
A
HOH
2024
5
HOH
HOH
2024
A
HOH
2025
5
HOH
HOH
2025
A
HOH
2026
5
HOH
HOH
2026
A
HOH
2027
5
HOH
HOH
2027
A
HOH
2028
5
HOH
HOH
2028
A
HOH
2029
5
HOH
HOH
2029
A
HOH
2030
5
HOH
HOH
2030
A
HOH
2031
5
HOH
HOH
2031
A
HOH
2032
5
HOH
HOH
2032
A
HOH
2033
5
HOH
HOH
2033
A
HOH
2034
5
HOH
HOH
2034
A
HOH
2035
5
HOH
HOH
2035
A
HOH
2036
5
HOH
HOH
2036
A
HOH
2037
5
HOH
HOH
2037
A
HOH
2038
5
HOH
HOH
2038
A
HOH
2039
5
HOH
HOH
2039
A
HOH
2040
5
HOH
HOH
2040
A
HOH
2041
5
HOH
HOH
2041
A
HOH
2042
5
HOH
HOH
2042
A
HOH
2043
5
HOH
HOH
2043
A
HOH
2044
5
HOH
HOH
2044
A
HOH
2045
5
HOH
HOH
2045
A
HOH
2046
5
HOH
HOH
2046
A
HOH
2047
5
HOH
HOH
2047
A
HOH
2048
5
HOH
HOH
2048
A
HOH
2049
5
HOH
HOH
2049
A
HOH
2050
5
HOH
HOH
2050
A
HOH
2051
5
HOH
HOH
2051
A
HOH
2052
5
HOH
HOH
2052
A
HOH
2053
5
HOH
HOH
2053
A
HOH
2054
5
HOH
HOH
2054
A
HOH
2055
5
HOH
HOH
2055
A
HOH
2056
5
HOH
HOH
2056
A
HOH
2057
5
HOH
HOH
2057
A
HOH
2058
5
HOH
HOH
2058
A
HOH
2059
5
HOH
HOH
2059
A
HOH
2060
5
HOH
HOH
2060
A
HOH
2061
5
HOH
HOH
2061
A
HOH
2062
5
HOH
HOH
2062
A
HOH
2063
5
HOH
HOH
2063
A
HOH
2064
5
HOH
HOH
2064
A
HOH
2065
5
HOH
HOH
2065
A
HOH
2066
5
HOH
HOH
2066
A
HOH
2067
5
HOH
HOH
2067
A
HOH
2068
5
HOH
HOH
2068
A
HOH
2069
5
HOH
HOH
2069
A
HOH
2070
5
HOH
HOH
2070
A
HOH
2071
5
HOH
HOH
2071
A
HOH
2072
5
HOH
HOH
2072
A
HOH
2073
5
HOH
HOH
2073
A
HOH
2074
5
HOH
HOH
2074
A
HOH
2075
5
HOH
HOH
2075
A
HOH
2076
5
HOH
HOH
2076
A
HOH
2077
5
HOH
HOH
2077
A
HOH
2078
5
HOH
HOH
2078
A
HOH
2079
5
HOH
HOH
2079
A
HOH
2080
5
HOH
HOH
2080
A
HOH
2081
5
HOH
HOH
2081
A
HOH
2082
5
HOH
HOH
2082
A
HOH
2083
5
HOH
HOH
2083
A
HOH
2084
5
HOH
HOH
2084
A
HOH
2085
5
HOH
HOH
2085
A
HOH
2086
5
HOH
HOH
2086
A
HOH
2087
5
HOH
HOH
2087
A
HOH
2088
5
HOH
HOH
2088
A
HOH
2089
5
HOH
HOH
2089
A
HOH
2090
5
HOH
HOH
2090
A
HOH
2091
5
HOH
HOH
2091
A
HOH
2092
5
HOH
HOH
2092
A
HOH
2093
5
HOH
HOH
2093
A
HOH
2094
5
HOH
HOH
2094
A
HOH
2095
5
HOH
HOH
2095
A
HOH
2096
5
HOH
HOH
2096
A
HOH
2097
5
HOH
HOH
2097
A
HOH
2098
5
HOH
HOH
2098
A
HOH
2099
5
HOH
HOH
2099
A
HOH
2100
5
HOH
HOH
2100
A
HOH
2101
5
HOH
HOH
2101
A
HOH
2102
5
HOH
HOH
2102
A
HOH
2103
5
HOH
HOH
2103
A
HOH
2104
5
HOH
HOH
2104
A
HOH
2105
5
HOH
HOH
2105
A
HOH
2106
5
HOH
HOH
2106
A
HOH
2107
5
HOH
HOH
2107
A
HOH
2108
5
HOH
HOH
2108
A
HOH
2109
5
HOH
HOH
2109
A
HOH
2110
5
HOH
HOH
2110
A
HOH
2111
5
HOH
HOH
2111
A
HOH
2112
5
HOH
HOH
2112
A
HOH
2113
5
HOH
HOH
2113
A
HOH
2114
5
HOH
HOH
2114
A
HOH
2115
5
HOH
HOH
2115
A
HOH
2116
5
HOH
HOH
2116
A
HOH
2117
5
HOH
HOH
2117
A
HOH
2118
5
HOH
HOH
2118
A
HOH
2119
5
HOH
HOH
2119
A
HOH
2120
5
HOH
HOH
2120
A
HOH
2121
5
HOH
HOH
2121
A
HOH
2122
5
HOH
HOH
2122
A
HOH
2123
5
HOH
HOH
2123
A
HOH
2124
5
HOH
HOH
2124
A
HOH
2125
5
HOH
HOH
2125
A
HOH
2126
5
HOH
HOH
2126
A
HOH
2127
5
HOH
HOH
2127
A
HOH
2001
5
HOH
HOH
2001
B
HOH
2002
5
HOH
HOH
2002
B
HOH
2003
5
HOH
HOH
2003
B
HOH
2004
5
HOH
HOH
2004
B
HOH
2005
5
HOH
HOH
2005
B
HOH
2006
5
HOH
HOH
2006
B
HOH
2007
5
HOH
HOH
2007
B
HOH
2008
5
HOH
HOH
2008
B
HOH
2009
5
HOH
HOH
2009
B
HOH
2010
5
HOH
HOH
2010
B
HOH
2011
5
HOH
HOH
2011
B
HOH
2012
5
HOH
HOH
2012
B
HOH
2013
5
HOH
HOH
2013
B
HOH
2014
5
HOH
HOH
2014
B
HOH
2015
5
HOH
HOH
2015
B
HOH
2016
5
HOH
HOH
2016
B
HOH
2017
5
HOH
HOH
2017
B
HOH
2018
5
HOH
HOH
2018
B
HOH
2019
5
HOH
HOH
2019
B
HOH
2020
5
HOH
HOH
2020
B
HOH
2021
5
HOH
HOH
2021
B
HOH
2022
5
HOH
HOH
2022
B
HOH
2023
5
HOH
HOH
2023
B
HOH
2024
5
HOH
HOH
2024
B
HOH
2025
5
HOH
HOH
2025
B
HOH
2026
5
HOH
HOH
2026
B
HOH
2027
5
HOH
HOH
2027
B
HOH
2028
5
HOH
HOH
2028
B
HOH
2029
5
HOH
HOH
2029
B
HOH
2030
5
HOH
HOH
2030
B
HOH
2031
5
HOH
HOH
2031
B
HOH
2032
5
HOH
HOH
2032
B
HOH
2033
5
HOH
HOH
2033
B
HOH
2034
5
HOH
HOH
2034
B
HOH
2035
5
HOH
HOH
2035
B
HOH
2036
5
HOH
HOH
2036
B
HOH
2037
5
HOH
HOH
2037
B
HOH
2038
5
HOH
HOH
2038
B
HOH
2039
5
HOH
HOH
2039
B
HOH
2040
5
HOH
HOH
2040
B
HOH
2041
5
HOH
HOH
2041
B
HOH
2042
5
HOH
HOH
2042
B
HOH
2043
5
HOH
HOH
2043
B
HOH
2044
5
HOH
HOH
2044
B
HOH
2045
5
HOH
HOH
2045
B
HOH
2046
5
HOH
HOH
2046
B
HOH
2047
5
HOH
HOH
2047
B
HOH
2048
5
HOH
HOH
2048
B
HOH
2049
5
HOH
HOH
2049
B
HOH
2050
5
HOH
HOH
2050
B
HOH
2051
5
HOH
HOH
2051
B
HOH
2052
5
HOH
HOH
2052
B
HOH
2053
5
HOH
HOH
2053
B
HOH
2054
5
HOH
HOH
2054
B
HOH
2055
5
HOH
HOH
2055
B
HOH
2056
5
HOH
HOH
2056
B
HOH
2057
5
HOH
HOH
2057
B
HOH
2058
5
HOH
HOH
2058
B
HOH
2059
5
HOH
HOH
2059
B
HOH
2060
5
HOH
HOH
2060
B
HOH
2061
5
HOH
HOH
2061
B
HOH
2062
5
HOH
HOH
2062
B
HOH
2063
5
HOH
HOH
2063
B
HOH
2064
5
HOH
HOH
2064
B
HOH
2065
5
HOH
HOH
2065
B
HOH
2066
5
HOH
HOH
2066
B
HOH
2067
5
HOH
HOH
2067
B
HOH
2068
5
HOH
HOH
2068
B
HOH
2069
5
HOH
HOH
2069
B
HOH
2070
5
HOH
HOH
2070
B
HOH
2071
5
HOH
HOH
2071
B
HOH
2072
5
HOH
HOH
2072
B
HOH
2073
5
HOH
HOH
2073
B
HOH
2074
5
HOH
HOH
2074
B
HOH
2075
5
HOH
HOH
2075
B
HOH
2076
5
HOH
HOH
2076
B
HOH
2077
5
HOH
HOH
2077
B
HOH
2078
5
HOH
HOH
2078
B
HOH
2079
5
HOH
HOH
2079
B
HOH
2080
5
HOH
HOH
2080
B
HOH
2081
5
HOH
HOH
2081
B
HOH
2082
5
HOH
HOH
2082
B
HOH
2083
5
HOH
HOH
2083
B
HOH
2084
5
HOH
HOH
2084
B
HOH
2085
5
HOH
HOH
2085
B
HOH
2086
5
HOH
HOH
2086
B
HOH
2087
5
HOH
HOH
2087
B
HOH
2088
5
HOH
HOH
2088
B
HOH
2089
5
HOH
HOH
2089
B
HOH
2090
5
HOH
HOH
2090
B
HOH
2091
5
HOH
HOH
2091
B
HOH
2092
5
HOH
HOH
2092
B
HOH
2093
5
HOH
HOH
2093
B
HOH
2094
5
HOH
HOH
2094
B
HOH
2095
5
HOH
HOH
2095
B
HOH
2096
5
HOH
HOH
2096
B
HOH
2097
5
HOH
HOH
2097
B
HOH
2098
5
HOH
HOH
2098
B
HOH
2099
5
HOH
HOH
2099
B
HOH
2100
5
HOH
HOH
2100
B
HOH
2101
5
HOH
HOH
2101
B
HOH
2102
5
HOH
HOH
2102
B
HOH
2103
5
HOH
HOH
2103
B
HOH
2104
5
HOH
HOH
2104
B
HOH
2105
5
HOH
HOH
2105
B
HOH
2106
5
HOH
HOH
2106
B
HOH
2107
5
HOH
HOH
2107
B
HOH
2108
5
HOH
HOH
2108
B
HOH
2109
5
HOH
HOH
2109
B
HOH
2110
5
HOH
HOH
2110
B
HOH
2111
5
HOH
HOH
2111
B
HOH
2112
5
HOH
HOH
2112
B
HOH
2113
5
HOH
HOH
2113
B
HOH
2114
5
HOH
HOH
2114
B
HOH
2115
5
HOH
HOH
2115
B
HOH
2116
5
HOH
HOH
2116
B
HOH
2117
5
HOH
HOH
2117
B
HOH
2118
5
HOH
HOH
2118
B
HOH
2119
5
HOH
HOH
2119
B
HOH
2120
5
HOH
HOH
2120
B
HOH
2121
5
HOH
HOH
2121
B
HOH
2122
5
HOH
HOH
2122
B
HOH
2123
5
HOH
HOH
2123
B
HOH
2124
5
HOH
HOH
2124
B
HOH
2125
5
HOH
HOH
2125
B
HOH
2126
5
HOH
HOH
2126
B
HOH
2127
5
HOH
HOH
2127
B
HOH
2128
5
HOH
HOH
2128
B
HOH
2129
5
HOH
HOH
2129
B
HOH
2130
5
HOH
HOH
2130
B
HOH
2131
5
HOH
HOH
2131
B
HOH
2132
5
HOH
HOH
2132
B
HOH
2133
5
HOH
HOH
2133
B
HOH
2134
5
HOH
HOH
2134
B
HOH
2135
5
HOH
HOH
2135
B
HOH
2136
5
HOH
HOH
2136
B
HOH
2137
5
HOH
HOH
2137
B
HOH
2138
5
HOH
HOH
2138
B
HOH
2139
5
HOH
HOH
2139
B
HOH
2140
5
HOH
HOH
2140
B
HOH
2141
5
HOH
HOH
2141
B
HOH
2142
5
HOH
HOH
2142
B
HOH
2143
5
HOH
HOH
2143
B
ASP
1
n
1
ASP
1
A
VAL
2
n
2
VAL
2
A
THR
3
n
3
THR
3
A
ASN
4
n
4
ASN
4
A
ALA
5
n
5
ALA
5
A
GLU
6
n
6
GLU
6
A
LYS
7
n
7
LYS
7
A
LEU
8
n
8
LEU
8
A
VAL
9
n
9
VAL
9
A
TYR
10
n
10
TYR
10
A
LYS
11
n
11
LYS
11
A
TYR
12
n
12
TYR
12
A
THR
13
n
13
THR
13
A
ASN
14
n
14
ASN
14
A
ILE
15
n
15
ILE
15
A
ALA
16
n
16
ALA
16
A
HIS
17
n
17
HIS
17
A
SER
18
n
18
SER
18
A
ALA
19
n
19
ALA
19
A
ASN
20
n
20
ASN
20
A
PRO
21
n
21
PRO
21
A
MET
22
n
22
MET
22
A
TYR
23
n
23
TYR
23
A
GLU
24
n
24
GLU
24
A
ALA
25
n
25
ALA
25
A
PRO
26
n
26
PRO
26
A
SER
27
n
27
SER
27
A
ILE
28
n
28
ILE
28
A
THR
29
n
29
THR
29
A
ASP
30
n
30
ASP
30
A
GLY
31
n
31
GLY
31
A
LYS
32
n
32
LYS
32
A
ILE
33
n
33
ILE
33
A
PHE
34
n
34
PHE
34
A
PHE
35
n
35
PHE
35
A
ASN
36
n
36
ASN
36
A
ARG
37
n
37
ARG
37
A
LYS
38
n
38
LYS
38
A
PHE
39
n
39
PHE
39
A
LYS
40
n
40
LYS
40
A
THR
41
n
41
THR
41
A
PRO
42
n
42
PRO
42
A
SER
43
n
43
SER
43
A
GLY
44
n
44
GLY
44
A
LYS
45
n
45
LYS
45
A
GLU
46
n
46
GLU
46
A
ALA
47
n
47
ALA
47
A
ALA
48
n
48
ALA
48
A
CYS
49
n
49
CYS
49
A
ALA
50
n
50
ALA
50
A
SER
51
n
51
SER
51
A
CYS
52
n
52
CYS
52
A
HIS
53
n
53
HIS
53
A
THR
54
n
54
THR
54
A
ASN
55
n
55
ASN
55
A
ASN
56
n
56
ASN
56
A
PRO
57
n
57
PRO
57
A
ALA
58
n
58
ALA
58
A
ASN
59
n
59
ASN
59
A
VAL
60
n
60
VAL
60
A
GLY
61
n
61
GLY
61
A
LYS
62
n
62
LYS
62
A
ASN
63
n
63
ASN
63
A
ILE
64
n
64
ILE
64
A
VAL
65
n
65
VAL
65
A
THR
66
n
66
THR
66
A
GLY
67
n
67
GLY
67
A
LYS
68
n
68
LYS
68
A
GLU
69
n
69
GLU
69
A
ILE
70
n
70
ILE
70
A
PRO
71
n
71
PRO
71
A
PRO
72
n
72
PRO
72
A
LEU
73
n
73
LEU
73
A
ALA
74
n
74
ALA
74
A
PRO
75
n
75
PRO
75
A
ARG
76
n
76
ARG
76
A
VAL
77
n
77
VAL
77
A
ASN
78
n
78
ASN
78
A
THR
79
n
79
THR
79
A
LYS
80
n
80
LYS
80
A
ARG
81
n
81
ARG
81
A
PHE
82
n
82
PHE
82
A
THR
83
n
83
THR
83
A
ASP
84
n
84
ASP
84
A
ILE
85
n
85
ILE
85
A
ASP
86
n
86
ASP
86
A
LYS
87
n
87
LYS
87
A
VAL
88
n
88
VAL
88
A
GLU
89
n
89
GLU
89
A
ASP
90
n
90
ASP
90
A
GLU
91
n
91
GLU
91
A
PHE
92
n
92
PHE
92
A
THR
93
n
93
THR
93
A
LYS
94
n
94
LYS
94
A
HIS
95
n
95
HIS
95
A
CYS
96
n
96
CYS
96
A
ASN
97
n
97
ASN
97
A
ASP
98
n
98
ASP
98
A
ILE
99
n
99
ILE
99
A
LEU
100
n
100
LEU
100
A
GLY
101
n
101
GLY
101
A
ALA
102
n
102
ALA
102
A
ASP
103
n
103
ASP
103
A
CYS
104
n
104
CYS
104
A
SER
105
n
105
SER
105
A
PRO
106
n
106
PRO
106
A
SER
107
n
107
SER
107
A
GLU
108
n
108
GLU
108
A
LYS
109
n
109
LYS
109
A
ALA
110
n
110
ALA
110
A
ASN
111
n
111
ASN
111
A
PHE
112
n
112
PHE
112
A
ILE
113
n
113
ILE
113
A
ALA
114
n
114
ALA
114
A
TYR
115
n
115
TYR
115
A
LEU
116
n
116
LEU
116
A
LEU
117
n
117
LEU
117
A
THR
118
n
118
THR
118
A
GLU
119
n
119
GLU
119
A
THR
120
n
120
THR
120
A
LYS
121
n
121
LYS
121
A
PRO
122
n
122
PRO
122
A
THR
123
n
123
THR
123
A
LYS
124
n
124
LYS
124
A
ASP
1
n
1
ASP
1
B
VAL
2
n
2
VAL
2
B
THR
3
n
3
THR
3
B
ASN
4
n
4
ASN
4
B
ALA
5
n
5
ALA
5
B
GLU
6
n
6
GLU
6
B
LYS
7
n
7
LYS
7
B
LEU
8
n
8
LEU
8
B
VAL
9
n
9
VAL
9
B
TYR
10
n
10
TYR
10
B
LYS
11
n
11
LYS
11
B
TYR
12
n
12
TYR
12
B
THR
13
n
13
THR
13
B
ASN
14
n
14
ASN
14
B
ILE
15
n
15
ILE
15
B
ALA
16
n
16
ALA
16
B
HIS
17
n
17
HIS
17
B
SER
18
n
18
SER
18
B
ALA
19
n
19
ALA
19
B
ASN
20
n
20
ASN
20
B
PRO
21
n
21
PRO
21
B
MET
22
n
22
MET
22
B
TYR
23
n
23
TYR
23
B
GLU
24
n
24
GLU
24
B
ALA
25
n
25
ALA
25
B
PRO
26
n
26
PRO
26
B
SER
27
n
27
SER
27
B
ILE
28
n
28
ILE
28
B
THR
29
n
29
THR
29
B
ASP
30
n
30
ASP
30
B
GLY
31
n
31
GLY
31
B
LYS
32
n
32
LYS
32
B
ILE
33
n
33
ILE
33
B
PHE
34
n
34
PHE
34
B
PHE
35
n
35
PHE
35
B
ASN
36
n
36
ASN
36
B
ARG
37
n
37
ARG
37
B
LYS
38
n
38
LYS
38
B
PHE
39
n
39
PHE
39
B
LYS
40
n
40
LYS
40
B
THR
41
n
41
THR
41
B
PRO
42
n
42
PRO
42
B
SER
43
n
43
SER
43
B
GLY
44
n
44
GLY
44
B
LYS
45
n
45
LYS
45
B
GLU
46
n
46
GLU
46
B
ALA
47
n
47
ALA
47
B
ALA
48
n
48
ALA
48
B
CYS
49
n
49
CYS
49
B
ALA
50
n
50
ALA
50
B
SER
51
n
51
SER
51
B
CYS
52
n
52
CYS
52
B
HIS
53
n
53
HIS
53
B
THR
54
n
54
THR
54
B
ASN
55
n
55
ASN
55
B
ASN
56
n
56
ASN
56
B
PRO
57
n
57
PRO
57
B
ALA
58
n
58
ALA
58
B
ASN
59
n
59
ASN
59
B
VAL
60
n
60
VAL
60
B
GLY
61
n
61
GLY
61
B
LYS
62
n
62
LYS
62
B
ASN
63
n
63
ASN
63
B
ILE
64
n
64
ILE
64
B
VAL
65
n
65
VAL
65
B
THR
66
n
66
THR
66
B
GLY
67
n
67
GLY
67
B
LYS
68
n
68
LYS
68
B
GLU
69
n
69
GLU
69
B
ILE
70
n
70
ILE
70
B
PRO
71
n
71
PRO
71
B
PRO
72
n
72
PRO
72
B
LEU
73
n
73
LEU
73
B
ALA
74
n
74
ALA
74
B
PRO
75
n
75
PRO
75
B
ARG
76
n
76
ARG
76
B
VAL
77
n
77
VAL
77
B
ASN
78
n
78
ASN
78
B
THR
79
n
79
THR
79
B
LYS
80
n
80
LYS
80
B
ARG
81
n
81
ARG
81
B
PHE
82
n
82
PHE
82
B
THR
83
n
83
THR
83
B
ASP
84
n
84
ASP
84
B
ILE
85
n
85
ILE
85
B
ASP
86
n
86
ASP
86
B
LYS
87
n
87
LYS
87
B
VAL
88
n
88
VAL
88
B
GLU
89
n
89
GLU
89
B
ASP
90
n
90
ASP
90
B
GLU
91
n
91
GLU
91
B
PHE
92
n
92
PHE
92
B
THR
93
n
93
THR
93
B
LYS
94
n
94
LYS
94
B
HIS
95
n
95
HIS
95
B
CYS
96
n
96
CYS
96
B
ASN
97
n
97
ASN
97
B
ASP
98
n
98
ASP
98
B
ILE
99
n
99
ILE
99
B
LEU
100
n
100
LEU
100
B
GLY
101
n
101
GLY
101
B
ALA
102
n
102
ALA
102
B
ASP
103
n
103
ASP
103
B
CYS
104
n
104
CYS
104
B
SER
105
n
105
SER
105
B
PRO
106
n
106
PRO
106
B
SER
107
n
107
SER
107
B
GLU
108
n
108
GLU
108
B
LYS
109
n
109
LYS
109
B
ALA
110
n
110
ALA
110
B
ASN
111
n
111
ASN
111
B
PHE
112
n
112
PHE
112
B
ILE
113
n
113
ILE
113
B
ALA
114
n
114
ALA
114
B
TYR
115
n
115
TYR
115
B
LEU
116
n
116
LEU
116
B
LEU
117
n
117
LEU
117
B
THR
118
n
118
THR
118
B
GLU
119
n
119
GLU
119
B
THR
120
n
120
THR
120
B
LYS
121
n
121
LYS
121
B
PRO
122
n
122
PRO
122
B
THR
123
n
123
THR
123
B
LYS
124
n
124
LYS
124
B
author_and_software_defined_assembly
PQS
1
monomeric
author_and_software_defined_assembly
PQS
1
monomeric
A
HIS
53
A
NE2
HIS
53
1_555
A
HEC
1125
C
FE
HEC
1_555
A
HEC
1125
C
NA
HEC
1_555
91.6
A
HIS
53
A
NE2
HIS
53
1_555
A
HEC
1125
C
FE
HEC
1_555
A
HEC
1125
C
NB
HEC
1_555
92.9
A
HEC
1125
C
NA
HEC
1_555
A
HEC
1125
C
FE
HEC
1_555
A
HEC
1125
C
NB
HEC
1_555
88.5
A
HIS
53
A
NE2
HIS
53
1_555
A
HEC
1125
C
FE
HEC
1_555
A
HEC
1125
C
NC
HEC
1_555
88.1
A
HEC
1125
C
NA
HEC
1_555
A
HEC
1125
C
FE
HEC
1_555
A
HEC
1125
C
NC
HEC
1_555
178.8
A
HEC
1125
C
NB
HEC
1_555
A
HEC
1125
C
FE
HEC
1_555
A
HEC
1125
C
NC
HEC
1_555
90.3
A
HIS
53
A
NE2
HIS
53
1_555
A
HEC
1125
C
FE
HEC
1_555
A
HEC
1125
C
ND
HEC
1_555
86.6
A
HEC
1125
C
NA
HEC
1_555
A
HEC
1125
C
FE
HEC
1_555
A
HEC
1125
C
ND
HEC
1_555
91.7
A
HEC
1125
C
NB
HEC
1_555
A
HEC
1125
C
FE
HEC
1_555
A
HEC
1125
C
ND
HEC
1_555
179.5
A
HEC
1125
C
NC
HEC
1_555
A
HEC
1125
C
FE
HEC
1_555
A
HEC
1125
C
ND
HEC
1_555
89.5
B
HIS
53
B
NE2
HIS
53
1_555
B
HEC
1125
J
FE
HEC
1_555
B
HEC
1125
J
NA
HEC
1_555
93.3
B
HIS
53
B
NE2
HIS
53
1_555
B
HEC
1125
J
FE
HEC
1_555
B
HEC
1125
J
NB
HEC
1_555
89.7
B
HEC
1125
J
NA
HEC
1_555
B
HEC
1125
J
FE
HEC
1_555
B
HEC
1125
J
NB
HEC
1_555
88.4
B
HIS
53
B
NE2
HIS
53
1_555
B
HEC
1125
J
FE
HEC
1_555
B
HEC
1125
J
NC
HEC
1_555
86.3
B
HEC
1125
J
NA
HEC
1_555
B
HEC
1125
J
FE
HEC
1_555
B
HEC
1125
J
NC
HEC
1_555
179.3
B
HEC
1125
J
NB
HEC
1_555
B
HEC
1125
J
FE
HEC
1_555
B
HEC
1125
J
NC
HEC
1_555
92.2
B
HIS
53
B
NE2
HIS
53
1_555
B
HEC
1125
J
FE
HEC
1_555
B
HEC
1125
J
ND
HEC
1_555
91.6
B
HEC
1125
J
NA
HEC
1_555
B
HEC
1125
J
FE
HEC
1_555
B
HEC
1125
J
ND
HEC
1_555
86.9
B
HEC
1125
J
NB
HEC
1_555
B
HEC
1125
J
FE
HEC
1_555
B
HEC
1125
J
ND
HEC
1_555
175.2
B
HEC
1125
J
NC
HEC
1_555
B
HEC
1125
J
FE
HEC
1_555
B
HEC
1125
J
ND
HEC
1_555
92.5
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
PHE
39
A
N
PHE
39
A
O
ALA
47
A
O
ALA
47
A
N
GLY
61
A
N
GLY
61
A
O
ILE
70
A
O
ILE
70
B
N
PHE
39
B
N
PHE
39
B
O
ALA
47
B
O
ALA
47
B
N
GLY
61
B
N
GLY
61
B
O
ILE
70
B
O
ILE
70
1
B
B
OG
O
SER
HOH
43
2060
2.10
A
1
B
B
O
O
HOH
HOH
2032
2080
2.14
1
A
A
O3
O
GOL
HOH
1126
2115
2.14
1
A
A
O
O
HOH
HOH
2069
2071
2.15
1
B
B
OD2
O
ASP
HOH
98
2106
2.18
A
1
A
A
O
O
HOH
HOH
2018
2099
2.19
1
B
B
THR
LYS
123
124
-148.86
1
5.85
0.90
118.30
124.15
A
A
A
CB
CG
OD2
ASP
ASP
ASP
90
90
90
N
1
6.10
0.90
118.30
124.40
B
B
B
CB
CG
OD2
ASP
ASP
ASP
30
30
30
N
1
A
THR
54
64.61
173.73
1
B
THR
54
64.50
171.24
25.35
-0.29000
0.00000
0.00000
0.53000
0.00000
-0.24000
0.946
0.909
0.243
0.185
0.188
1.95
25.00
1283
23808
5.100
98.5
3.350
0.096
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.150
0.153
0.80
0.80
1.40
OXIDIZED STRUCTURE OF CYTOCHROME C"
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
1.95
25.00
270
2336
146
0
1920
0.022
0.022
2144
1.852
2.101
2930
5.813
5.000
246
0.136
0.200
305
0.010
0.020
1587
0.286
0.200
1125
0.204
0.200
239
0.190
0.200
64
0.165
0.200
20
1.120
1.500
1252
2.026
2.000
2047
3.455
3.000
892
5.503
4.500
883
0.2790
0.2490
2.00
86
1506
20
1.940
46.860
1OAE
25348
2.000
0.08300
1
7.2000
4.000
97.9
0.48000
1.94
2.05
2.100
1
3.50
87.8
refinement
REFMAC
5.1.24
data reduction
MOSFLM
data scaling
SCALA
phasing
MOLREP
CYTOCHROME C"
Crystal structure of the reduced form of cytochrome c" from Methylophilus methylotrophus
1
N
N
1
N
N
2
N
N
3
N
N
3
N
N
3
N
N
4
N
N
4
N
N
4
N
N
2
N
N
3
N
N
3
N
N
4
N
N
4
N
N
4
N
N
5
N
N
5
N
N
A
ASP
1
A
ASP
1
HELX_P
A
ASN
20
A
ASN
20
1
1
20
A
SER
27
A
SER
27
HELX_P
A
ARG
37
A
ARG
37
1
2
11
A
ALA
48
A
ALA
48
HELX_P
A
THR
54
A
THR
54
1
3
7
A
ASP
84
A
ASP
84
HELX_P
A
GLY
101
A
GLY
101
1
4
18
A
SER
105
A
SER
105
HELX_P
A
LEU
117
A
LEU
117
1
5
13
B
ASP
1
B
ASP
1
HELX_P
B
ASN
20
B
ASN
20
1
6
20
B
SER
27
B
SER
27
HELX_P
B
ARG
37
B
ARG
37
1
7
11
B
ALA
48
B
ALA
48
HELX_P
B
THR
54
B
THR
54
1
8
7
B
ASP
84
B
ASP
84
HELX_P
B
GLY
101
B
GLY
101
1
9
18
B
SER
105
B
SER
105
HELX_P
B
LEU
117
B
LEU
117
1
10
13
disulf
2.599
A
CYS
96
A
SG
CYS
96
1_555
A
CYS
104
A
SG
CYS
104
1_555
disulf
2.868
B
CYS
96
B
SG
CYS
96
1_555
B
CYS
104
B
SG
CYS
104
1_555
covale
1.863
none
A
CYS
49
A
SG
CYS
49
1_555
A
HEC
1125
C
CAB
HEC
1_555
covale
2.082
none
A
CYS
52
A
SG
CYS
52
1_555
A
HEC
1125
C
CAC
HEC
1_555
metalc
2.062
A
HEC
1125
C
FE
HEC
1_555
A
HIS
53
A
NE2
HIS
53
1_555
covale
1.821
none
B
CYS
49
B
SG
CYS
49
1_555
B
HEC
1125
J
CAB
HEC
1_555
covale
2.080
none
B
CYS
52
B
SG
CYS
52
1_555
B
HEC
1125
J
CAC
HEC
1_555
metalc
2.043
B
HIS
53
B
NE2
HIS
53
1_555
B
HEC
1125
J
FE
HEC
1_555
OXIDOREDUCTASE(CYTOCHROME)
OXIDOREDUCTASE(CYTOCHROME), CYTOCHROME C, OXIDOREDUCTASE, ELECTRON TRANSPORT
Q9RQB9
UNP
1
Q9RQB9
21
144
1OAE
1
124
Q9RQB9
A
1
1
124
21
144
1OAE
1
124
Q9RQB9
B
1
1
124
2
2
2
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
PHE
39
A
PHE
39
A
LYS
40
A
LYS
40
A
GLU
46
A
GLU
46
A
ALA
47
A
ALA
47
A
GLY
61
A
GLY
61
A
LYS
62
A
LYS
62
A
GLU
69
A
GLU
69
A
ILE
70
A
ILE
70
B
PHE
39
B
PHE
39
B
LYS
40
B
LYS
40
B
GLU
46
B
GLU
46
B
ALA
47
B
ALA
47
B
GLY
61
B
GLY
61
B
LYS
62
B
LYS
62
B
GLU
69
B
GLU
69
B
ILE
70
B
ILE
70
BINDING SITE FOR RESIDUE SO4 A 1129
Software
6
BINDING SITE FOR RESIDUE SO4 A 1130
Software
9
BINDING SITE FOR RESIDUE SO4 A 1131
Software
5
BINDING SITE FOR RESIDUE SO4 B 1128
Software
9
BINDING SITE FOR RESIDUE SO4 B 1129
Software
7
BINDING SITE FOR RESIDUE SO4 B 1130
Software
5
BINDING SITE FOR RESIDUE HEC A 1125
Software
16
BINDING SITE FOR RESIDUE HEC B 1125
Software
17
BINDING SITE FOR RESIDUE GOL A 1126
Software
7
BINDING SITE FOR RESIDUE GOL A 1127
Software
5
BINDING SITE FOR RESIDUE GOL A 1128
Software
4
BINDING SITE FOR RESIDUE GOL B 1126
Software
7
BINDING SITE FOR RESIDUE GOL B 1127
Software
8
A
LYS
7
A
LYS
7
6
1_555
A
HOH
2118
P
HOH
6
1_555
A
HOH
2120
P
HOH
6
1_555
A
HOH
2121
P
HOH
6
1_555
B
ALA
102
B
ALA
102
6
2_564
B
ASP
103
B
ASP
103
6
2_564
A
LYS
80
A
LYS
80
9
1_555
A
ARG
81
A
ARG
81
9
1_555
A
PHE
82
A
PHE
82
9
1_555
A
VAL
88
A
VAL
88
9
1_555
A
GLU
91
A
GLU
91
9
1_555
A
HEC
1125
C
HEC
9
1_555
A
HOH
2122
P
HOH
9
1_555
A
HOH
2123
P
HOH
9
1_555
A
HOH
2124
P
HOH
9
1_555
A
ASN
59
A
ASN
59
5
1_555
A
VAL
60
A
VAL
60
5
1_555
A
HOH
2125
P
HOH
5
1_555
A
HOH
2126
P
HOH
5
1_555
A
HOH
2127
P
HOH
5
1_555
A
ASN
97
A
ASN
97
9
3_545
A
ALA
102
A
ALA
102
9
3_545
A
ASP
103
A
ASP
103
9
3_545
B
LYS
7
B
LYS
7
9
1_555
B
LYS
45
B
LYS
45
9
3_545
B
HOH
2096
Q
HOH
9
1_555
B
HOH
2137
Q
HOH
9
1_555
B
HOH
2138
Q
HOH
9
1_555
B
HOH
2139
Q
HOH
9
1_555
B
ARG
81
B
ARG
81
7
1_555
B
PHE
82
B
PHE
82
7
1_555
B
LYS
87
B
LYS
87
7
1_555
B
VAL
88
B
VAL
88
7
1_555
B
GLU
91
B
GLU
91
7
1_555
B
HEC
1125
J
HEC
7
1_555
B
HOH
2140
Q
HOH
7
1_555
B
SER
27
B
SER
27
5
1_555
B
ILE
28
B
ILE
28
5
1_555
B
THR
29
B
THR
29
5
1_555
B
HOH
2142
Q
HOH
5
1_555
B
HOH
2143
Q
HOH
5
1_555
A
ALA
48
A
ALA
48
16
1_555
A
CYS
49
A
CYS
49
16
1_555
A
CYS
52
A
CYS
52
16
1_555
A
HIS
53
A
HIS
53
16
1_555
A
ASN
63
A
ASN
63
16
1_555
A
ILE
70
A
ILE
70
16
1_555
A
PRO
71
A
PRO
71
16
1_555
A
LEU
73
A
LEU
73
16
1_555
A
ARG
81
A
ARG
81
16
1_555
A
GLU
91
A
GLU
91
16
1_555
A
PHE
92
A
PHE
92
16
1_555
A
HIS
95
A
HIS
95
16
1_555
A
ILE
99
A
ILE
99
16
1_555
A
SO4
1130
H
SO4
16
1_555
A
HOH
2112
P
HOH
16
1_555
A
HOH
2113
P
HOH
16
1_555
B
PHE
34
B
PHE
34
17
1_555
B
CYS
49
B
CYS
49
17
1_555
B
CYS
52
B
CYS
52
17
1_555
B
HIS
53
B
HIS
53
17
1_555
B
ASN
63
B
ASN
63
17
1_555
B
ILE
70
B
ILE
70
17
1_555
B
PRO
71
B
PRO
71
17
1_555
B
LEU
73
B
LEU
73
17
1_555
B
ARG
81
B
ARG
81
17
1_555
B
GLU
91
B
GLU
91
17
1_555
B
PHE
92
B
PHE
92
17
1_555
B
HIS
95
B
HIS
95
17
1_555
B
ILE
99
B
ILE
99
17
1_555
B
SO4
1129
N
SO4
17
1_555
B
HOH
2132
Q
HOH
17
1_555
B
HOH
2133
Q
HOH
17
1_555
B
HOH
2134
Q
HOH
17
1_555
A
PRO
26
A
PRO
26
7
1_555
A
SER
27
A
SER
27
7
1_555
A
ILE
28
A
ILE
28
7
1_555
A
THR
29
A
THR
29
7
1_555
A
HOH
2114
P
HOH
7
1_555
A
HOH
2115
P
HOH
7
1_555
B
PRO
21
B
PRO
21
7
2_564
A
ARG
37
A
ARG
37
5
1_555
A
GLU
108
A
GLU
108
5
1_555
A
HOH
2101
P
HOH
5
1_555
A
HOH
2117
P
HOH
5
1_555
B
PRO
42
B
PRO
42
5
1_555
A
ILE
33
A
ILE
33
4
1_555
A
ARG
37
A
ARG
37
4
1_555
A
HOH
2044
P
HOH
4
1_555
A
HOH
2050
P
HOH
4
1_555
A
ASN
97
A
ASN
97
7
1_555
A
HOH
2090
P
HOH
7
1_555
B
ILE
64
B
ILE
64
7
1_555
B
VAL
65
B
VAL
65
7
1_555
B
ILE
99
B
ILE
99
7
1_555
B
HOH
2108
Q
HOH
7
1_555
B
HOH
2135
Q
HOH
7
1_555
A
VAL
65
A
VAL
65
8
1_555
A
ILE
99
A
ILE
99
8
1_555
B
ASN
97
B
ASN
97
8
1_555
B
ASP
98
B
ASP
98
8
1_555
B
GLY
101
B
GLY
101
8
1_555
B
HOH
2104
Q
HOH
8
1_555
B
HOH
2112
Q
HOH
8
1_555
B
HOH
2136
Q
HOH
8
1_555
19
P 21 21 21