0.011290
0.000000
0.000000
0.000000
0.011290
0.000000
0.000000
0.000000
0.014700
0.00000
0.00000
0.00000
Abergel, C.
Walburger, A.
Bouveret, E.
Claverie, J.M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.00
90.00
90.00
88.575
88.575
68.028
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
S
C
N
125
N
C
N
126
N
O
N
127
N
C
Y
128
N
C
Y
129
N
N
Y
130
N
C
Y
131
N
C
Y
132
N
N
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
S
C
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
S
C
N
171
N
C
N
172
N
O
N
173
N
C
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
O
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
N
N
192
S
C
N
193
N
C
N
194
N
O
N
195
N
C
N
196
N
C
N
197
N
C
N
198
N
C
N
199
N
N
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
N
N
217
S
C
N
218
N
C
N
219
N
O
N
220
N
C
N
221
N
C
N
222
N
S
N
223
N
C
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
N
N
237
S
C
N
238
N
C
N
239
N
O
N
240
N
C
Y
241
N
C
Y
242
N
C
Y
243
N
C
Y
244
N
C
Y
245
N
C
Y
246
N
C
N
247
N
O
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
N
N
260
S
C
N
261
N
C
N
262
N
O
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
N
N
277
S
C
N
278
N
C
N
279
N
O
N
280
N
C
N
281
N
O
N
282
N
O
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
S
N
291
N
O
N
292
N
O
N
293
N
O
N
294
N
O
N
295
N
N
N
296
S
C
N
297
N
C
N
298
N
O
N
299
R
C
N
300
N
O
N
301
N
C
N
302
N
O
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
N
N
313
S
C
N
314
N
C
N
315
N
O
N
316
N
C
Y
317
N
C
Y
318
N
C
Y
319
N
C
Y
320
N
C
Y
321
N
C
Y
322
N
C
N
323
N
O
N
324
N
O
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
N
N
337
S
C
N
338
N
C
N
339
N
O
N
340
N
C
N
341
N
C
N
342
N
C
N
343
N
O
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
Y
235
N
doub
Y
236
N
sing
Y
237
N
sing
N
238
N
sing
Y
239
N
doub
N
240
N
sing
Y
241
N
doub
N
242
N
sing
Y
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
doub
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
doub
N
278
N
doub
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
doub
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
doub
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
Y
308
N
doub
Y
309
N
sing
Y
310
N
sing
N
311
N
sing
Y
312
N
doub
N
313
N
sing
Y
314
N
doub
N
315
N
sing
Y
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
doub
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
57
317
319
10.1107/s0907444900019739
11173492
Crystallization and preliminary crystallographic study of the peptidoglycan-associated lipoprotein from Escherichia coli.
2001
10.2210/pdb1oap/pdb
pdb_00001oap
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
105.0
1
CCD
2001-12-15
ADSC CCD
MAD
M
x-ray
1
0.9393
1.0
0.97953
1.0
0.97921
1.0
ID29
ESRF
0.9393,0.97953,0.97921
SYNCHROTRON
ESRF BEAMLINE ID29
12315.746
PEPTIDOGLYCAN-ASSOCIATED LIPOPROTEIN
PERIPLASMIC DOMAIN, RESIDUES 65-137
1
man
polymer
96.063
SULFATE ION
2
syn
non-polymer
18.015
water
86
nat
water
no
no
LQQNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNISLGERRANAVKMYLQGKGVSADQIS
IVSYGKEKPAVLGHDEAAYSKNRRAVLVY
LQQNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNISLGERRANAVKMYLQGKGVSADQIS
IVSYGKEKPAVLGHDEAAYSKNRRAVLVY
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
PERIPLASMIC DOMAIN
562
ESCHERICHIA COLI
469008
Escherichia coli BL21(DE3)
PET14
1
2.8
56
6.00
MPD 40%, PEG 4000 10%, AMSO4 0.2M, IMIDAZOLE 10MM, MES BUFF, pH 6.00
entity_src_gen
citation
pdbx_database_status
chem_comp_atom
chem_comp_bond
database_2
struct_site
repository
Initial release
Database references
Derived calculations
Non-polymer description
Other
Refinement description
Version format compliance
Source and taxonomy
Data collection
Database references
Other
Data collection
Database references
Derived calculations
1
0
2004-02-13
1
1
2014-02-05
1
2
2018-03-28
1
3
2019-10-09
1
4
2024-05-08
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id
_entity_src_gen.pdbx_host_org_scientific_name
_entity_src_gen.pdbx_host_org_strain
_entity_src_gen.pdbx_host_org_variant
_citation.page_last
_citation.pdbx_database_id_DOI
_citation.title
_pdbx_database_status.status_code_sf
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
PDBE
Y
PDBE
2003-01-20
REL
REL
1
A
O
HOH
2025
6.85
SO4
SULFATE ION
HOH
water
PROBABLY PLAYS A ROLE IN BACTERIAL ENVELOPE INTEGRITY.
SHOWS VERY STRONG ASSOCIATION WITH PEPTIDOGLYCAN
CORRESPONDS TO A TRUNCATED FORM OF THE PAL PROTEIN
SO4
410
2
SO4
SO4
410
A
SO4
411
2
SO4
SO4
411
A
HOH
2001
3
HOH
HOH
2001
A
HOH
2002
3
HOH
HOH
2002
A
HOH
2003
3
HOH
HOH
2003
A
HOH
2004
3
HOH
HOH
2004
A
HOH
2005
3
HOH
HOH
2005
A
HOH
2006
3
HOH
HOH
2006
A
HOH
2007
3
HOH
HOH
2007
A
HOH
2008
3
HOH
HOH
2008
A
HOH
2009
3
HOH
HOH
2009
A
HOH
2010
3
HOH
HOH
2010
A
HOH
2011
3
HOH
HOH
2011
A
HOH
2012
3
HOH
HOH
2012
A
HOH
2013
3
HOH
HOH
2013
A
HOH
2014
3
HOH
HOH
2014
A
HOH
2015
3
HOH
HOH
2015
A
HOH
2016
3
HOH
HOH
2016
A
HOH
2017
3
HOH
HOH
2017
A
HOH
2018
3
HOH
HOH
2018
A
HOH
2019
3
HOH
HOH
2019
A
HOH
2020
3
HOH
HOH
2020
A
HOH
2021
3
HOH
HOH
2021
A
HOH
2022
3
HOH
HOH
2022
A
HOH
2023
3
HOH
HOH
2023
A
HOH
2024
3
HOH
HOH
2024
A
HOH
2025
3
HOH
HOH
2025
A
HOH
2026
3
HOH
HOH
2026
A
HOH
2027
3
HOH
HOH
2027
A
HOH
2028
3
HOH
HOH
2028
A
HOH
2029
3
HOH
HOH
2029
A
HOH
2030
3
HOH
HOH
2030
A
HOH
2031
3
HOH
HOH
2031
A
HOH
2032
3
HOH
HOH
2032
A
HOH
2033
3
HOH
HOH
2033
A
HOH
2034
3
HOH
HOH
2034
A
HOH
2035
3
HOH
HOH
2035
A
HOH
2036
3
HOH
HOH
2036
A
HOH
2037
3
HOH
HOH
2037
A
HOH
2038
3
HOH
HOH
2038
A
HOH
2039
3
HOH
HOH
2039
A
HOH
2040
3
HOH
HOH
2040
A
HOH
2041
3
HOH
HOH
2041
A
HOH
2042
3
HOH
HOH
2042
A
HOH
2043
3
HOH
HOH
2043
A
HOH
2044
3
HOH
HOH
2044
A
HOH
2045
3
HOH
HOH
2045
A
HOH
2046
3
HOH
HOH
2046
A
HOH
2047
3
HOH
HOH
2047
A
HOH
2048
3
HOH
HOH
2048
A
HOH
2049
3
HOH
HOH
2049
A
HOH
2050
3
HOH
HOH
2050
A
HOH
2051
3
HOH
HOH
2051
A
HOH
2052
3
HOH
HOH
2052
A
HOH
2053
3
HOH
HOH
2053
A
HOH
2054
3
HOH
HOH
2054
A
HOH
2055
3
HOH
HOH
2055
A
HOH
2056
3
HOH
HOH
2056
A
HOH
2057
3
HOH
HOH
2057
A
HOH
2058
3
HOH
HOH
2058
A
HOH
2059
3
HOH
HOH
2059
A
HOH
2060
3
HOH
HOH
2060
A
HOH
2061
3
HOH
HOH
2061
A
HOH
2062
3
HOH
HOH
2062
A
HOH
2063
3
HOH
HOH
2063
A
HOH
2064
3
HOH
HOH
2064
A
HOH
2065
3
HOH
HOH
2065
A
HOH
2066
3
HOH
HOH
2066
A
HOH
2067
3
HOH
HOH
2067
A
HOH
2068
3
HOH
HOH
2068
A
HOH
2069
3
HOH
HOH
2069
A
HOH
2070
3
HOH
HOH
2070
A
HOH
2071
3
HOH
HOH
2071
A
HOH
2072
3
HOH
HOH
2072
A
HOH
2073
3
HOH
HOH
2073
A
HOH
2074
3
HOH
HOH
2074
A
HOH
2075
3
HOH
HOH
2075
A
HOH
2076
3
HOH
HOH
2076
A
HOH
2077
3
HOH
HOH
2077
A
HOH
2078
3
HOH
HOH
2078
A
HOH
2079
3
HOH
HOH
2079
A
HOH
2080
3
HOH
HOH
2080
A
HOH
2081
3
HOH
HOH
2081
A
HOH
2082
3
HOH
HOH
2082
A
HOH
2083
3
HOH
HOH
2083
A
HOH
2084
3
HOH
HOH
2084
A
HOH
2085
3
HOH
HOH
2085
A
HOH
2086
3
HOH
HOH
2086
A
n
1
44
A
GLN
45
n
2
GLN
45
A
GLN
46
n
3
GLN
46
A
ASN
47
n
4
ASN
47
A
ASN
48
n
5
ASN
48
A
ILE
49
n
6
ILE
49
A
VAL
50
n
7
VAL
50
A
TYR
51
n
8
TYR
51
A
PHE
52
n
9
PHE
52
A
ASP
53
n
10
ASP
53
A
LEU
54
n
11
LEU
54
A
ASP
55
n
12
ASP
55
A
LYS
56
n
13
LYS
56
A
TYR
57
n
14
TYR
57
A
ASP
58
n
15
ASP
58
A
ILE
59
n
16
ILE
59
A
ARG
60
n
17
ARG
60
A
SER
61
n
18
SER
61
A
ASP
62
n
19
ASP
62
A
PHE
63
n
20
PHE
63
A
ALA
64
n
21
ALA
64
A
GLN
65
n
22
GLN
65
A
MET
66
n
23
MET
66
A
LEU
67
n
24
LEU
67
A
ASP
68
n
25
ASP
68
A
ALA
69
n
26
ALA
69
A
HIS
70
n
27
HIS
70
A
ALA
71
n
28
ALA
71
A
ASN
72
n
29
ASN
72
A
PHE
73
n
30
PHE
73
A
LEU
74
n
31
LEU
74
A
ARG
75
n
32
ARG
75
A
SER
76
n
33
SER
76
A
ASN
77
n
34
ASN
77
A
PRO
78
n
35
PRO
78
A
SER
79
n
36
SER
79
A
TYR
80
n
37
TYR
80
A
LYS
81
n
38
LYS
81
A
VAL
82
n
39
VAL
82
A
THR
83
n
40
THR
83
A
VAL
84
n
41
VAL
84
A
GLU
85
n
42
GLU
85
A
GLY
86
n
43
GLY
86
A
HIS
87
n
44
HIS
87
A
ALA
88
n
45
ALA
88
A
ASP
89
n
46
ASP
89
A
GLU
90
n
47
GLU
90
A
ARG
91
n
48
ARG
91
A
GLY
92
n
49
GLY
92
A
THR
93
n
50
THR
93
A
PRO
94
n
51
PRO
94
A
GLU
95
n
52
GLU
95
A
TYR
96
n
53
TYR
96
A
ASN
97
n
54
ASN
97
A
ILE
98
n
55
ILE
98
A
SER
99
n
56
SER
99
A
LEU
100
n
57
LEU
100
A
GLY
101
n
58
GLY
101
A
GLU
102
n
59
GLU
102
A
ARG
103
n
60
ARG
103
A
ARG
104
n
61
ARG
104
A
ALA
105
n
62
ALA
105
A
ASN
106
n
63
ASN
106
A
ALA
107
n
64
ALA
107
A
VAL
108
n
65
VAL
108
A
LYS
109
n
66
LYS
109
A
MET
110
n
67
MET
110
A
TYR
111
n
68
TYR
111
A
LEU
112
n
69
LEU
112
A
GLN
113
n
70
GLN
113
A
GLY
114
n
71
GLY
114
A
LYS
115
n
72
LYS
115
A
GLY
116
n
73
GLY
116
A
VAL
117
n
74
VAL
117
A
SER
118
n
75
SER
118
A
ALA
119
n
76
ALA
119
A
ASP
120
n
77
ASP
120
A
GLN
121
n
78
GLN
121
A
ILE
122
n
79
ILE
122
A
SER
123
n
80
SER
123
A
ILE
124
n
81
ILE
124
A
VAL
125
n
82
VAL
125
A
SER
126
n
83
SER
126
A
TYR
127
n
84
TYR
127
A
GLY
128
n
85
GLY
128
A
LYS
129
n
86
LYS
129
A
GLU
130
n
87
GLU
130
A
LYS
131
n
88
LYS
131
A
PRO
132
n
89
PRO
132
A
ALA
133
n
90
ALA
133
A
VAL
134
n
91
VAL
134
A
LEU
135
n
92
LEU
135
A
GLY
136
n
93
GLY
136
A
HIS
137
n
94
HIS
137
A
ASP
138
n
95
ASP
138
A
GLU
139
n
96
GLU
139
A
ALA
140
n
97
ALA
140
A
ALA
141
n
98
ALA
141
A
TYR
142
n
99
TYR
142
A
SER
143
n
100
SER
143
A
LYS
144
n
101
LYS
144
A
ASN
145
n
102
ASN
145
A
ARG
146
n
103
ARG
146
A
ARG
147
n
104
ARG
147
A
ALA
148
n
105
ALA
148
A
VAL
149
n
106
VAL
149
A
LEU
150
n
107
LEU
150
A
VAL
151
n
108
VAL
151
A
TYR
152
n
109
TYR
152
A
author_and_software_defined_assembly
PQS
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
VAL
50
A
N
VAL
7
A
O
ALA
148
A
O
ALA
105
A
N
VAL
151
A
N
VAL
108
A
O
THR
83
A
O
THR
40
A
N
VAL
84
A
N
VAL
41
A
O
SER
123
A
O
SER
80
1
A
LEU
44
A
LEU
1
1
Y
1
A
A
NH2
NH2
ARG
ARG
60
60
2.00
1_555
5_654
1
A
GLN
46
-82.97
-115.50
1
A
ASP
55
58.99
14.81
PROTEIN_REP.PARAM
PROTEIN.TOP
WATER_REP.PARAM
WATER.TOP
ION.PARAM
ION.TOP
30.4
-4.64
0.00
0.00
-4.64
0.00
9.28
0.234
0.010
0.2
0.2
1.93
17.98
543
10342
5.3
99.0
RANDOM
1793074.34
1
RESTRAINED
THROUGHOUT
0.0
MAD
FLAT MODEL
60.21
0.39
0.28
0.23
5.00
0.25
0.19
1.93
17.98
86
956
10
0
860
0.018
1.7
23.6
1.02
1.46
1.50
2.18
2.00
2.53
2.00
3.72
2.50
0.331
0.038
0.265
2.05
76
1519
6
4.8
94.5
20.2
2.500
34.000
1OAP
9422
0.05500
1
7.7000
4.100
96.3
0.21800
2.50
2.64
3.400
1
4.10
97.5
data reduction
MOSFLM
data scaling
SCALA
phasing
SOLVE
phasing
SHARP
refinement
CNS
1.0
Mad structure of the periplasmique domain of the Escherichia coli PAL protein
1
N
N
2
N
N
2
N
N
3
N
N
A
ARG
60
A
ARG
17
HELX_P
A
ASP
62
A
ASP
19
5
1
3
A
PHE
63
A
PHE
20
HELX_P
A
SER
76
A
SER
33
1
2
14
A
THR
93
A
THR
50
HELX_P
A
GLY
114
A
GLY
71
1
3
22
A
SER
118
A
SER
75
HELX_P
A
ASP
120
A
ASP
77
5
4
3
A
ASP
138
A
ASP
95
HELX_P
A
ARG
146
A
ARG
103
1
5
9
LIPOPROTEIN
PERIPLASMIC, PEPTIDOGLYCAN BINDING, TOL SYSTEM, OUTER MEMBRANE, LIPOPROTEIN
PAL_ECOLI
UNP
1
P07176
65
173
1OAP
44
152
P07176
A
1
1
109
4
anti-parallel
anti-parallel
parallel
A
ILE
49
A
ILE
6
A
TYR
51
A
TYR
8
A
ARG
147
A
ARG
104
A
VAL
151
A
VAL
108
A
VAL
82
A
VAL
39
A
GLY
86
A
GLY
43
A
ILE
122
A
ILE
79
A
SER
126
A
SER
83
BINDING SITE FOR RESIDUE SO4 A 410
A
SO4
410
Software
9
BINDING SITE FOR RESIDUE SO4 A 411
A
SO4
411
Software
2
A
LEU
54
A
LEU
11
9
1_555
A
ASP
55
A
ASP
12
9
1_555
A
ALA
88
A
ALA
45
9
1_555
A
ASP
89
A
ASP
46
9
1_555
A
TYR
96
A
TYR
53
9
1_555
A
ASN
97
A
ASN
54
9
1_555
A
LEU
100
A
LEU
57
9
1_555
A
ARG
104
A
ARG
61
9
1_555
A
ARG
146
A
ARG
103
9
1_555
A
TYR
51
A
TYR
8
2
1_555
A
SER
143
A
SER
100
2
1_555
98
I 41 2 2