1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Kim, J.I.
Konishi, S.
Iwai, H.
Kohno, T.
Gouda, H.
Shimada, I.
Sato, K.
Arata, Y.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
250
659
671
10.1006/jmbi.1995.0406
7623383
Three-dimensional solution structure of the calcium channel antagonist omega-agatoxin IVA: consensus molecular folding of calcium channel blockers.
1995
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
5220.393
OMEGA-AGATOXIN IVA
1
man
polymer
no
no
KKKCIAKDYGRCKWGGTPCCRGRGCICSIMGTNCECKPRLIMEGLGLA
KKKCIAKDYGRCKWGGTPCCRGRGCICSIMGTNCECKPRLIMEGLGLA
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Agelenopsis
sample
6908
Agelenopsis aperta
pdbx_database_status
pdbx_struct_assembly
pdbx_struct_oper_list
struct_conf
repository
Initial release
Version format compliance
Version format compliance
Derived calculations
Other
1
0
1995-10-15
1
1
2008-03-24
1
2
2011-07-13
1
3
2017-11-29
_pdbx_database_status.process_site
Y
BNL
1995-06-28
REL
14
BRUNGER
refinement
X-PLOR
3.1
LYS
1
n
1
LYS
1
A
LYS
2
n
2
LYS
2
A
LYS
3
n
3
LYS
3
A
CYS
4
n
4
CYS
4
A
ILE
5
n
5
ILE
5
A
ALA
6
n
6
ALA
6
A
LYS
7
n
7
LYS
7
A
ASP
8
n
8
ASP
8
A
TYR
9
n
9
TYR
9
A
GLY
10
n
10
GLY
10
A
ARG
11
n
11
ARG
11
A
CYS
12
n
12
CYS
12
A
LYS
13
n
13
LYS
13
A
TRP
14
n
14
TRP
14
A
GLY
15
n
15
GLY
15
A
GLY
16
n
16
GLY
16
A
THR
17
n
17
THR
17
A
PRO
18
n
18
PRO
18
A
CYS
19
n
19
CYS
19
A
CYS
20
n
20
CYS
20
A
ARG
21
n
21
ARG
21
A
GLY
22
n
22
GLY
22
A
ARG
23
n
23
ARG
23
A
GLY
24
n
24
GLY
24
A
CYS
25
n
25
CYS
25
A
ILE
26
n
26
ILE
26
A
CYS
27
n
27
CYS
27
A
SER
28
n
28
SER
28
A
ILE
29
n
29
ILE
29
A
MET
30
n
30
MET
30
A
GLY
31
n
31
GLY
31
A
THR
32
n
32
THR
32
A
ASN
33
n
33
ASN
33
A
CYS
34
n
34
CYS
34
A
GLU
35
n
35
GLU
35
A
CYS
36
n
36
CYS
36
A
LYS
37
n
37
LYS
37
A
PRO
38
n
38
PRO
38
A
ARG
39
n
39
ARG
39
A
LEU
40
n
40
LEU
40
A
ILE
41
n
41
ILE
41
A
MET
42
n
42
MET
42
A
GLU
43
n
43
GLU
43
A
GLY
44
n
44
GLY
44
A
LEU
45
n
45
LEU
45
A
GLY
46
n
46
GLY
46
A
LEU
47
n
47
LEU
47
A
ALA
48
n
48
ALA
48
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
ARG
11
0.245
SIDE CHAIN
1
A
ARG
21
0.318
SIDE CHAIN
1
A
ARG
23
0.164
SIDE CHAIN
1
A
ARG
39
0.171
SIDE CHAIN
2
A
ARG
21
0.283
SIDE CHAIN
2
A
ARG
23
0.284
SIDE CHAIN
2
A
ARG
39
0.289
SIDE CHAIN
3
A
ARG
11
0.302
SIDE CHAIN
3
A
ARG
21
0.279
SIDE CHAIN
3
A
ARG
23
0.172
SIDE CHAIN
3
A
ARG
39
0.302
SIDE CHAIN
4
A
ARG
11
0.280
SIDE CHAIN
4
A
ARG
21
0.227
SIDE CHAIN
4
A
ARG
23
0.317
SIDE CHAIN
4
A
ARG
39
0.195
SIDE CHAIN
5
A
ARG
11
0.289
SIDE CHAIN
5
A
ARG
21
0.181
SIDE CHAIN
5
A
ARG
23
0.229
SIDE CHAIN
5
A
ARG
39
0.269
SIDE CHAIN
6
A
ARG
11
0.318
SIDE CHAIN
6
A
ARG
21
0.263
SIDE CHAIN
6
A
ARG
23
0.190
SIDE CHAIN
6
A
ARG
39
0.314
SIDE CHAIN
7
A
ARG
11
0.088
SIDE CHAIN
7
A
ARG
21
0.317
SIDE CHAIN
7
A
ARG
23
0.218
SIDE CHAIN
8
A
ARG
11
0.187
SIDE CHAIN
8
A
ARG
21
0.306
SIDE CHAIN
8
A
ARG
39
0.271
SIDE CHAIN
9
A
ARG
11
0.318
SIDE CHAIN
9
A
ARG
21
0.207
SIDE CHAIN
9
A
ARG
39
0.240
SIDE CHAIN
10
A
ARG
11
0.092
SIDE CHAIN
10
A
ARG
21
0.317
SIDE CHAIN
10
A
ARG
23
0.294
SIDE CHAIN
10
A
ARG
39
0.271
SIDE CHAIN
11
A
ARG
11
0.181
SIDE CHAIN
11
A
ARG
21
0.148
SIDE CHAIN
11
A
ARG
23
0.200
SIDE CHAIN
11
A
ARG
39
0.231
SIDE CHAIN
12
A
ARG
11
0.290
SIDE CHAIN
12
A
ARG
21
0.225
SIDE CHAIN
12
A
ARG
23
0.243
SIDE CHAIN
12
A
ARG
39
0.302
SIDE CHAIN
13
A
ARG
11
0.247
SIDE CHAIN
13
A
ARG
21
0.082
SIDE CHAIN
13
A
ARG
23
0.297
SIDE CHAIN
13
A
ARG
39
0.317
SIDE CHAIN
14
A
ARG
11
0.256
SIDE CHAIN
14
A
ARG
21
0.314
SIDE CHAIN
14
A
ARG
23
0.198
SIDE CHAIN
14
A
ARG
39
0.279
SIDE CHAIN
1
A
LYS
2
73.78
177.70
1
A
CYS
4
-179.76
-172.16
1
A
PRO
18
-77.47
-116.42
1
A
CYS
20
-87.89
-76.93
1
A
ARG
21
-38.34
-28.47
1
A
CYS
25
-68.67
97.21
1
A
CYS
27
-108.33
-169.31
1
A
MET
42
-52.71
-169.26
1
A
GLU
43
42.71
-153.87
1
A
LEU
45
11.82
-70.14
1
A
LEU
47
34.59
-86.15
2
A
LYS
2
44.33
76.21
2
A
LYS
3
78.16
89.34
2
A
CYS
4
38.00
-167.34
2
A
PRO
18
-79.20
-107.05
2
A
CYS
20
-85.69
-74.88
2
A
ARG
21
-36.11
-29.57
2
A
ARG
23
-79.27
-167.71
2
A
CYS
27
-108.08
-168.76
2
A
SER
28
-99.29
33.79
2
A
THR
32
-125.70
-163.97
2
A
ASN
33
44.74
29.49
2
A
LEU
40
58.17
136.18
2
A
ILE
41
-50.22
-73.78
3
A
CYS
4
173.33
-175.87
3
A
PRO
18
-78.45
-97.80
3
A
CYS
20
-86.62
-74.99
3
A
ARG
21
-37.77
-28.40
3
A
ARG
23
-79.63
-158.67
3
A
CYS
27
-113.86
-169.13
3
A
ASN
33
-118.01
69.37
3
A
LEU
40
-138.05
-55.43
3
A
LEU
47
39.62
34.12
4
A
CYS
4
173.16
-172.31
4
A
PRO
18
-78.91
-153.92
4
A
CYS
20
-90.39
-76.63
4
A
ARG
21
-37.91
-30.72
4
A
CYS
25
-65.54
88.93
4
A
THR
32
-122.47
-53.29
4
A
ASN
33
-84.60
44.77
4
A
ARG
39
165.94
-170.46
4
A
LEU
40
-71.84
-147.56
4
A
ILE
41
-84.98
48.58
4
A
GLU
43
-75.03
-167.00
5
A
LYS
3
67.81
78.44
5
A
CYS
4
-177.72
-172.60
5
A
PRO
18
-78.39
-116.65
5
A
CYS
20
-88.57
-77.44
5
A
ARG
21
-37.88
-71.12
5
A
CYS
25
-64.04
92.86
5
A
CYS
27
-108.95
-166.19
5
A
ILE
29
48.44
20.48
5
A
ILE
41
-109.68
-94.88
5
A
MET
42
-169.05
-34.51
5
A
GLU
43
56.78
116.45
5
A
LEU
45
30.87
40.28
6
A
LYS
2
55.20
106.69
6
A
LYS
3
-151.19
73.79
6
A
CYS
4
-52.69
-173.41
6
A
PRO
18
-77.76
-96.85
6
A
CYS
20
-84.79
-75.30
6
A
ARG
23
-87.16
-157.34
6
A
ARG
39
75.53
143.10
6
A
ILE
41
-100.75
45.67
6
A
LEU
47
39.58
-89.44
7
A
LYS
3
170.95
91.97
7
A
PRO
18
-77.30
-120.68
7
A
CYS
20
-86.28
-75.17
7
A
ARG
21
-36.39
-30.48
7
A
CYS
25
-57.60
89.82
7
A
SER
28
-96.82
38.81
7
A
ILE
29
41.01
28.79
7
A
MET
30
-146.59
13.52
7
A
ARG
39
46.90
92.00
7
A
ILE
41
-107.24
45.47
7
A
LEU
47
38.97
42.06
8
A
LYS
2
-166.34
69.15
8
A
LYS
3
169.99
48.24
8
A
CYS
4
-55.94
-170.05
8
A
PRO
18
-80.09
-153.65
8
A
CYS
20
-86.58
-74.74
8
A
ARG
21
-36.33
-30.08
8
A
CYS
25
-66.98
93.61
8
A
ARG
39
166.17
138.16
8
A
ILE
41
-101.33
41.24
9
A
LYS
2
52.65
101.58
9
A
LYS
3
81.52
93.40
9
A
ARG
11
-39.58
124.56
9
A
PRO
18
-76.43
-108.07
9
A
CYS
20
-89.97
-75.63
9
A
ARG
21
-38.75
-33.86
9
A
CYS
25
-59.52
91.27
9
A
SER
28
-97.79
40.64
9
A
ILE
29
42.37
27.76
9
A
MET
30
-142.34
11.44
9
A
GLU
43
-116.09
-163.16
10
A
LYS
3
66.60
100.18
10
A
PRO
18
-80.47
-154.72
10
A
CYS
20
-86.25
-77.14
10
A
CYS
25
-63.48
88.39
10
A
THR
32
-116.07
-78.95
10
A
ARG
39
-149.86
50.75
10
A
LEU
40
-163.20
-157.81
10
A
ILE
41
36.59
30.95
10
A
MET
42
-156.42
20.46
11
A
LYS
2
-147.34
18.57
11
A
LYS
3
158.56
97.37
11
A
CYS
4
39.00
-166.35
11
A
PRO
18
-78.04
-118.66
11
A
CYS
20
-84.46
-75.06
11
A
ARG
21
-35.65
-29.42
11
A
SER
28
-98.64
33.45
11
A
ILE
29
59.74
16.04
11
A
ASN
33
59.67
16.03
11
A
LEU
40
-178.76
134.79
11
A
GLU
43
-66.22
-177.15
12
A
CYS
4
-52.74
-179.39
12
A
PRO
18
-79.34
-96.06
12
A
CYS
20
-73.54
-72.77
12
A
ARG
21
-38.61
-28.52
12
A
ARG
23
-80.15
-148.55
12
A
CYS
27
-115.26
-169.55
12
A
SER
28
-92.55
35.67
12
A
PRO
38
-77.42
-169.01
12
A
LEU
47
40.01
75.17
13
A
LYS
3
63.06
98.73
13
A
PRO
18
-78.00
-109.92
13
A
CYS
20
-90.58
-74.74
13
A
ARG
21
-30.23
-34.36
13
A
CYS
25
-60.42
89.37
13
A
SER
28
-94.39
48.58
13
A
ILE
29
41.91
27.24
13
A
THR
32
-137.68
-58.54
13
A
PRO
38
-82.33
49.06
13
A
ILE
41
-98.20
47.77
13
A
MET
42
-48.68
-77.95
13
A
GLU
43
39.80
96.86
13
A
LEU
47
-131.33
-60.44
14
A
LYS
2
55.56
-172.06
14
A
LYS
3
47.03
89.51
14
A
CYS
4
38.71
-167.11
14
A
PRO
18
-79.06
-155.33
14
A
CYS
20
-80.45
-75.08
14
A
ARG
21
-36.10
-31.30
14
A
SER
28
-95.66
43.40
14
A
ILE
29
40.06
28.27
14
A
ARG
39
-103.59
45.71
14
A
ILE
41
-102.27
-100.07
14
A
MET
42
-146.67
21.31
model building
X-PLOR
refinement
X-PLOR
phasing
X-PLOR
OMEGA-AGATOXIN IVA
OMEGA-AGATOXIN IVA
1
Y
N
disulf
2.017
A
CYS
4
A
SG
CYS
4
1_555
A
CYS
20
A
SG
CYS
20
1_555
disulf
2.019
A
CYS
12
A
SG
CYS
12
1_555
A
CYS
25
A
SG
CYS
25
1_555
disulf
2.023
A
CYS
19
A
SG
CYS
19
1_555
A
CYS
36
A
SG
CYS
36
1_555
disulf
2.021
A
CYS
27
A
SG
CYS
27
1_555
A
CYS
34
A
SG
CYS
34
1_555
NEUROTOXIN
NEUROTOXIN
TOG4A_AGEAP
UNP
1
1
P30288
KKKCIAKDYGRCKWGGTPCCRGRGCICSIMGTNCECKPRLIMEGLGLA
1
48
1OAW
1
48
P30288
A
1
1
48
3
anti-parallel
anti-parallel
A
GLY
10
A
GLY
10
A
CYS
12
A
CYS
12
A
CYS
34
A
CYS
34
A
LYS
37
A
LYS
37
A
GLY
24
A
GLY
24
A
CYS
27
A
CYS
27
1
P 1