1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Qi, P.X.
Beckman, R.A.
Wand, A.J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C34 H34 Fe N4 O4
618.503
HEME C
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Biochemistry
BICHAW
0033
0006-2960
35
12275
12286
10.1021/bi961042w
8823161
Solution structure of horse heart ferricytochrome c and detection of redox-related structural changes by high-resolution 1H NMR.
1996
US
Nat.Struct.Biol.
NSBIEW
2024
1072-8368
1
378
382
7664051
Structural Water in Oxidized and Reduced Horse Heart Cytochrome C
1994
US
Biochemistry
BICHAW
0033
0006-2960
33
6408
6417
8204573
Solution Structure of Horse Heart Ferrocytochrome C Determined by High-Resolution NMR and Restrained Simulated Annealing
1994
US
Biochemistry
BICHAW
0033
0006-2960
28
195
203
2539855
Proton Resonance Assignments of Horse Ferricytochrome C
1989
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
OXIDIZED
11725.598
CYTOCHROME C
1
nat
polymer
618.503
HEME C
1
syn
non-polymer
18.015
water
6
nat
water
no
no
GDVEKGKKIFVQKCAQCHTVEKGGKHKTGPNLHGLFGRKTGQAPGFTYTDANKNKGITWKEETLMEYLENPKKYIPGTKM
IFAGIKKKTEREDLIAYLKKATNE
GDVEKGKKIFVQKCAQCHTVEKGGKHKTGPNLHGLFGRKTGQAPGFTYTDANKNKGITWKEETLMEYLENPKKYIPGTKM
IFAGIKKKTEREDLIAYLKKATNE
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
horse
Equus
sample
9796
HEART
Equus caballus
pdbx_database_status
pdbx_struct_assembly
pdbx_struct_oper_list
struct_conf
struct_conf_type
citation
pdbx_nmr_ensemble
pdbx_nmr_exptl
pdbx_nmr_exptl_sample
pdbx_nmr_representative
pdbx_nmr_sample_details
pdbx_nmr_software
pdbx_nmr_spectrometer
pdbx_struct_assembly_prop
repository
Initial release
Version format compliance
Version format compliance
Derived calculations
Other
Data collection
Database references
Derived calculations
Experimental preparation
1
0
1997-06-16
1
1
2008-03-24
1
2
2011-07-13
1
3
2017-11-29
1
4
2018-03-14
_pdbx_database_status.process_site
_citation.page_last
_citation.pdbx_database_id_PubMed
_pdbx_nmr_ensemble.conformer_selection_criteria
_pdbx_nmr_spectrometer.field_strength
_pdbx_nmr_spectrometer.model
Y
BNL
1996-07-03
REL
REL
HEC
HEME C
HOH
water
structures with the least restraint violations
64
1
COSY
TOCSY
NOESY
3D NOESY-TOCSY
DQF-COSY
7-10
mM
[U-15N]
50
mM
natural abundance
15
mM
[U-13C; U-15N]
50
mM
natural abundance
5.7
293
K
DISTANCE GEOMETRY, SIMULATED ANNEALING
1
fewest violations
[U-15N] 7-10 mM cytochrome c, 50 mM potassium phosphate
sample_1
90% H2O/10% D2O
solution
[U-13C; U-15N] 15 mM cytochrome c, 50 mM potassium phosphate
sample_2
90% H2O/10% D2O
solution
BRUNGER
refinement
X-PLOR
Hare Research
structure solution
DSPACE
BRUNGER
structure solution
X-PLOR
Biosym Technologies Inc.
data analysis
Felix
600
Bruker
AM
500
Bruker
AMX
300
Bruker
AM
HEC
105
2
HEC
HEC
105
A
HOH
200
3
HOH
HOH
200
A
HOH
201
3
HOH
HOH
201
A
HOH
202
3
HOH
HOH
202
A
HOH
203
3
HOH
HOH
203
A
HOH
204
3
HOH
HOH
204
A
HOH
205
3
HOH
HOH
205
A
GLY
1
n
1
GLY
1
A
ASP
2
n
2
ASP
2
A
VAL
3
n
3
VAL
3
A
GLU
4
n
4
GLU
4
A
LYS
5
n
5
LYS
5
A
GLY
6
n
6
GLY
6
A
LYS
7
n
7
LYS
7
A
LYS
8
n
8
LYS
8
A
ILE
9
n
9
ILE
9
A
PHE
10
n
10
PHE
10
A
VAL
11
n
11
VAL
11
A
GLN
12
n
12
GLN
12
A
LYS
13
n
13
LYS
13
A
CYS
14
n
14
CYS
14
A
ALA
15
n
15
ALA
15
A
GLN
16
n
16
GLN
16
A
CYS
17
n
17
CYS
17
A
HIS
18
n
18
HIS
18
A
THR
19
n
19
THR
19
A
VAL
20
n
20
VAL
20
A
GLU
21
n
21
GLU
21
A
LYS
22
n
22
LYS
22
A
GLY
23
n
23
GLY
23
A
GLY
24
n
24
GLY
24
A
LYS
25
n
25
LYS
25
A
HIS
26
n
26
HIS
26
A
LYS
27
n
27
LYS
27
A
THR
28
n
28
THR
28
A
GLY
29
n
29
GLY
29
A
PRO
30
n
30
PRO
30
A
ASN
31
n
31
ASN
31
A
LEU
32
n
32
LEU
32
A
HIS
33
n
33
HIS
33
A
GLY
34
n
34
GLY
34
A
LEU
35
n
35
LEU
35
A
PHE
36
n
36
PHE
36
A
GLY
37
n
37
GLY
37
A
ARG
38
n
38
ARG
38
A
LYS
39
n
39
LYS
39
A
THR
40
n
40
THR
40
A
GLY
41
n
41
GLY
41
A
GLN
42
n
42
GLN
42
A
ALA
43
n
43
ALA
43
A
PRO
44
n
44
PRO
44
A
GLY
45
n
45
GLY
45
A
PHE
46
n
46
PHE
46
A
THR
47
n
47
THR
47
A
TYR
48
n
48
TYR
48
A
THR
49
n
49
THR
49
A
ASP
50
n
50
ASP
50
A
ALA
51
n
51
ALA
51
A
ASN
52
n
52
ASN
52
A
LYS
53
n
53
LYS
53
A
ASN
54
n
54
ASN
54
A
LYS
55
n
55
LYS
55
A
GLY
56
n
56
GLY
56
A
ILE
57
n
57
ILE
57
A
THR
58
n
58
THR
58
A
TRP
59
n
59
TRP
59
A
LYS
60
n
60
LYS
60
A
GLU
61
n
61
GLU
61
A
GLU
62
n
62
GLU
62
A
THR
63
n
63
THR
63
A
LEU
64
n
64
LEU
64
A
MET
65
n
65
MET
65
A
GLU
66
n
66
GLU
66
A
TYR
67
n
67
TYR
67
A
LEU
68
n
68
LEU
68
A
GLU
69
n
69
GLU
69
A
ASN
70
n
70
ASN
70
A
PRO
71
n
71
PRO
71
A
LYS
72
n
72
LYS
72
A
LYS
73
n
73
LYS
73
A
TYR
74
n
74
TYR
74
A
ILE
75
n
75
ILE
75
A
PRO
76
n
76
PRO
76
A
GLY
77
n
77
GLY
77
A
THR
78
n
78
THR
78
A
LYS
79
n
79
LYS
79
A
MET
80
n
80
MET
80
A
ILE
81
n
81
ILE
81
A
PHE
82
n
82
PHE
82
A
ALA
83
n
83
ALA
83
A
GLY
84
n
84
GLY
84
A
ILE
85
n
85
ILE
85
A
LYS
86
n
86
LYS
86
A
LYS
87
n
87
LYS
87
A
LYS
88
n
88
LYS
88
A
THR
89
n
89
THR
89
A
GLU
90
n
90
GLU
90
A
ARG
91
n
91
ARG
91
A
GLU
92
n
92
GLU
92
A
ASP
93
n
93
ASP
93
A
LEU
94
n
94
LEU
94
A
ILE
95
n
95
ILE
95
A
ALA
96
n
96
ALA
96
A
TYR
97
n
97
TYR
97
A
LEU
98
n
98
LEU
98
A
LYS
99
n
99
LYS
99
A
LYS
100
n
100
LYS
100
A
ALA
101
n
101
ALA
101
A
THR
102
n
102
THR
102
A
ASN
103
n
103
ASN
103
A
GLU
104
n
104
GLU
104
A
author_defined_assembly
1
monomeric
1100
-23
6350
A
HIS
18
A
NE2
HIS
18
1_555
A
HEC
105
B
FE
HEC
1_555
A
HEC
105
B
NA
HEC
1_555
92.0
A
HIS
18
A
NE2
HIS
18
1_555
A
HEC
105
B
FE
HEC
1_555
A
HEC
105
B
NB
HEC
1_555
78.6
A
HEC
105
B
NA
HEC
1_555
A
HEC
105
B
FE
HEC
1_555
A
HEC
105
B
NB
HEC
1_555
89.8
A
HIS
18
A
NE2
HIS
18
1_555
A
HEC
105
B
FE
HEC
1_555
A
HEC
105
B
NC
HEC
1_555
80.6
A
HEC
105
B
NA
HEC
1_555
A
HEC
105
B
FE
HEC
1_555
A
HEC
105
B
NC
HEC
1_555
172.5
A
HEC
105
B
NB
HEC
1_555
A
HEC
105
B
FE
HEC
1_555
A
HEC
105
B
NC
HEC
1_555
89.6
A
HIS
18
A
NE2
HIS
18
1_555
A
HEC
105
B
FE
HEC
1_555
A
HEC
105
B
ND
HEC
1_555
93.9
A
HEC
105
B
NA
HEC
1_555
A
HEC
105
B
FE
HEC
1_555
A
HEC
105
B
ND
HEC
1_555
89.3
A
HEC
105
B
NB
HEC
1_555
A
HEC
105
B
FE
HEC
1_555
A
HEC
105
B
ND
HEC
1_555
172.4
A
HEC
105
B
NC
HEC
1_555
A
HEC
105
B
FE
HEC
1_555
A
HEC
105
B
ND
HEC
1_555
90.3
A
HIS
18
A
NE2
HIS
18
1_555
A
HEC
105
B
FE
HEC
1_555
A
MET
80
A
SD
MET
80
1_555
152.0
A
HEC
105
B
NA
HEC
1_555
A
HEC
105
B
FE
HEC
1_555
A
MET
80
A
SD
MET
80
1_555
112.5
A
HEC
105
B
NB
HEC
1_555
A
HEC
105
B
FE
HEC
1_555
A
MET
80
A
SD
MET
80
1_555
113.4
A
HEC
105
B
NC
HEC
1_555
A
HEC
105
B
FE
HEC
1_555
A
MET
80
A
SD
MET
80
1_555
74.5
A
HEC
105
B
ND
HEC
1_555
A
HEC
105
B
FE
HEC
1_555
A
MET
80
A
SD
MET
80
1_555
73.8
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
A
H
H1
ALA
HOH
43
203
1.31
1
A
A
HA
H2
ASN
HOH
31
200
1.32
1
A
ARG
38
0.308
SIDE CHAIN
1
A
ARG
91
0.306
SIDE CHAIN
1
A
VAL
3
-107.75
-68.05
1
A
CYS
14
-101.92
40.96
1
A
VAL
20
-136.19
-55.26
1
A
LYS
27
-58.62
-142.21
1
A
LEU
35
-47.72
175.81
1
A
PHE
36
-2.41
72.10
1
A
ARG
38
81.49
-42.63
1
A
THR
40
-100.04
-61.99
1
A
GLN
42
-55.51
-101.01
1
A
PRO
44
-48.01
-17.87
1
A
PHE
46
-64.29
-109.32
1
A
THR
47
-150.47
18.67
1
A
TYR
48
-44.23
157.94
1
A
THR
49
-78.57
-155.31
1
A
ASP
50
-90.04
54.70
1
A
ALA
51
-167.32
-57.25
1
A
LYS
55
-54.87
-152.48
1
A
ILE
57
-89.66
-151.85
1
A
TRP
59
-145.57
50.32
1
A
LYS
60
-89.98
-132.06
1
A
GLU
61
-80.52
-85.85
1
A
MET
65
-30.28
-35.44
1
A
PRO
71
-51.64
-78.36
1
A
LYS
72
-39.80
-28.45
1
A
ILE
75
-161.35
92.67
1
A
PHE
82
179.91
107.92
1
A
ALA
83
-105.46
73.23
1
A
LYS
87
-48.33
-99.73
1
A
LYS
88
179.98
-73.83
1
A
ILE
95
-57.01
-76.46
model building
X-PLOR
refinement
X-PLOR
phasing
X-PLOR
CYTOCHROME C, HEME C
CYTOCHROME C (OXIDIZED) FROM EQUUS CABALLUS, NMR, MINIMIZED AVERAGE STRUCTURE
1
Y
N
2
N
N
3
N
N
A
VAL
3
A
VAL
3
HELX_P
A
CYS
14
A
CYS
14
1
NR
12
A
LYS
60
A
LYS
60
HELX_P
A
LEU
68
A
LEU
68
1
60R
9
A
ASN
70
A
ASN
70
HELX_P
A
ILE
75
A
ILE
75
5
70R
6
A
LYS
88
A
LYS
88
HELX_P
A
THR
102
A
THR
102
1
CR
15
covale
1.810
A
HEC
105
B
CAB
HEC
1_555
A
CYS
14
A
SG
CYS
14
1_555
covale
1.810
A
HEC
105
B
CAC
HEC
1_555
A
CYS
17
A
SG
CYS
17
1_555
metalc
2.058
A
HEC
105
B
FE
HEC
1_555
A
HIS
18
A
NE2
HIS
18
1_555
metalc
2.435
A
HEC
105
B
FE
HEC
1_555
A
MET
80
A
SD
MET
80
1_555
ELECTRON TRANSPORT
ELECTRON TRANSPORT
CYC_HORSE
UNP
1
1
P00004
GDVEKGKKIFVQKCAQCHTVEKGGKHKTGPNLHGLFGRKTGQAPGFTYTDANKNKGITWKEETLMEYLENPKKYIPGTKM
IFAGIKKKTEREDLIAYLKKATNE
1
104
1OCD
1
104
P00004
A
1
1
104
BINDING SITE FOR RESIDUE HEC A 105
Software
20
A
CYS
14
A
CYS
14
20
1_555
A
CYS
17
A
CYS
17
20
1_555
A
HIS
18
A
HIS
18
20
1_555
A
PRO
30
A
PRO
30
20
1_555
A
THR
40
A
THR
40
20
1_555
A
GLN
42
A
GLN
42
20
1_555
A
THR
47
A
THR
47
20
1_555
A
TYR
48
A
TYR
48
20
1_555
A
THR
49
A
THR
49
20
1_555
A
ASN
52
A
ASN
52
20
1_555
A
TRP
59
A
TRP
59
20
1_555
A
LEU
64
A
LEU
64
20
1_555
A
TYR
67
A
TYR
67
20
1_555
A
LEU
68
A
LEU
68
20
1_555
A
THR
78
A
THR
78
20
1_555
A
LYS
79
A
LYS
79
20
1_555
A
MET
80
A
MET
80
20
1_555
A
PHE
82
A
PHE
82
20
1_555
A
ILE
85
A
ILE
85
20
1_555
A
LEU
94
A
LEU
94
20
1_555
1
P 1