1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Qi, P.X. Beckman, R.A. Wand, A.J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C34 H34 Fe N4 O4 618.503 HEME C non-polymer C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Biochemistry BICHAW 0033 0006-2960 35 12275 12286 10.1021/bi961042w 8823161 Solution structure of horse heart ferricytochrome c and detection of redox-related structural changes by high-resolution 1H NMR. 1996 US Nat.Struct.Biol. NSBIEW 2024 1072-8368 1 378 382 7664051 Structural Water in Oxidized and Reduced Horse Heart Cytochrome C 1994 US Biochemistry BICHAW 0033 0006-2960 33 6408 6417 8204573 Solution Structure of Horse Heart Ferrocytochrome C Determined by High-Resolution NMR and Restrained Simulated Annealing 1994 US Biochemistry BICHAW 0033 0006-2960 28 195 203 2539855 Proton Resonance Assignments of Horse Ferricytochrome C 1989 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 OXIDIZED 11725.598 CYTOCHROME C 1 nat polymer 618.503 HEME C 1 syn non-polymer 18.015 water 6 nat water no no GDVEKGKKIFVQKCAQCHTVEKGGKHKTGPNLHGLFGRKTGQAPGFTYTDANKNKGITWKEETLMEYLENPKKYIPGTKM IFAGIKKKTEREDLIAYLKKATNE GDVEKGKKIFVQKCAQCHTVEKGGKHKTGPNLHGLFGRKTGQAPGFTYTDANKNKGITWKEETLMEYLENPKKYIPGTKM IFAGIKKKTEREDLIAYLKKATNE A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n horse Equus sample 9796 HEART Equus caballus pdbx_database_status pdbx_struct_assembly pdbx_struct_oper_list struct_conf struct_conf_type citation pdbx_nmr_ensemble pdbx_nmr_exptl pdbx_nmr_exptl_sample pdbx_nmr_representative pdbx_nmr_sample_details pdbx_nmr_software pdbx_nmr_spectrometer pdbx_struct_assembly_prop repository Initial release Version format compliance Version format compliance Derived calculations Other Data collection Database references Derived calculations Experimental preparation 1 0 1997-06-16 1 1 2008-03-24 1 2 2011-07-13 1 3 2017-11-29 1 4 2018-03-14 _pdbx_database_status.process_site _citation.page_last _citation.pdbx_database_id_PubMed _pdbx_nmr_ensemble.conformer_selection_criteria _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.model Y BNL 1996-07-03 REL REL HEC HEME C HOH water structures with the least restraint violations 64 1 COSY TOCSY NOESY 3D NOESY-TOCSY DQF-COSY 7-10 mM [U-15N] 50 mM natural abundance 15 mM [U-13C; U-15N] 50 mM natural abundance 5.7 293 K DISTANCE GEOMETRY, SIMULATED ANNEALING 1 fewest violations [U-15N] 7-10 mM cytochrome c, 50 mM potassium phosphate sample_1 90% H2O/10% D2O solution [U-13C; U-15N] 15 mM cytochrome c, 50 mM potassium phosphate sample_2 90% H2O/10% D2O solution BRUNGER refinement X-PLOR Hare Research structure solution DSPACE BRUNGER structure solution X-PLOR Biosym Technologies Inc. data analysis Felix 600 Bruker AM 500 Bruker AMX 300 Bruker AM HEC 105 2 HEC HEC 105 A HOH 200 3 HOH HOH 200 A HOH 201 3 HOH HOH 201 A HOH 202 3 HOH HOH 202 A HOH 203 3 HOH HOH 203 A HOH 204 3 HOH HOH 204 A HOH 205 3 HOH HOH 205 A GLY 1 n 1 GLY 1 A ASP 2 n 2 ASP 2 A VAL 3 n 3 VAL 3 A GLU 4 n 4 GLU 4 A LYS 5 n 5 LYS 5 A GLY 6 n 6 GLY 6 A LYS 7 n 7 LYS 7 A LYS 8 n 8 LYS 8 A ILE 9 n 9 ILE 9 A PHE 10 n 10 PHE 10 A VAL 11 n 11 VAL 11 A GLN 12 n 12 GLN 12 A LYS 13 n 13 LYS 13 A CYS 14 n 14 CYS 14 A ALA 15 n 15 ALA 15 A GLN 16 n 16 GLN 16 A CYS 17 n 17 CYS 17 A HIS 18 n 18 HIS 18 A THR 19 n 19 THR 19 A VAL 20 n 20 VAL 20 A GLU 21 n 21 GLU 21 A LYS 22 n 22 LYS 22 A GLY 23 n 23 GLY 23 A GLY 24 n 24 GLY 24 A LYS 25 n 25 LYS 25 A HIS 26 n 26 HIS 26 A LYS 27 n 27 LYS 27 A THR 28 n 28 THR 28 A GLY 29 n 29 GLY 29 A PRO 30 n 30 PRO 30 A ASN 31 n 31 ASN 31 A LEU 32 n 32 LEU 32 A HIS 33 n 33 HIS 33 A GLY 34 n 34 GLY 34 A LEU 35 n 35 LEU 35 A PHE 36 n 36 PHE 36 A GLY 37 n 37 GLY 37 A ARG 38 n 38 ARG 38 A LYS 39 n 39 LYS 39 A THR 40 n 40 THR 40 A GLY 41 n 41 GLY 41 A GLN 42 n 42 GLN 42 A ALA 43 n 43 ALA 43 A PRO 44 n 44 PRO 44 A GLY 45 n 45 GLY 45 A PHE 46 n 46 PHE 46 A THR 47 n 47 THR 47 A TYR 48 n 48 TYR 48 A THR 49 n 49 THR 49 A ASP 50 n 50 ASP 50 A ALA 51 n 51 ALA 51 A ASN 52 n 52 ASN 52 A LYS 53 n 53 LYS 53 A ASN 54 n 54 ASN 54 A LYS 55 n 55 LYS 55 A GLY 56 n 56 GLY 56 A ILE 57 n 57 ILE 57 A THR 58 n 58 THR 58 A TRP 59 n 59 TRP 59 A LYS 60 n 60 LYS 60 A GLU 61 n 61 GLU 61 A GLU 62 n 62 GLU 62 A THR 63 n 63 THR 63 A LEU 64 n 64 LEU 64 A MET 65 n 65 MET 65 A GLU 66 n 66 GLU 66 A TYR 67 n 67 TYR 67 A LEU 68 n 68 LEU 68 A GLU 69 n 69 GLU 69 A ASN 70 n 70 ASN 70 A PRO 71 n 71 PRO 71 A LYS 72 n 72 LYS 72 A LYS 73 n 73 LYS 73 A TYR 74 n 74 TYR 74 A ILE 75 n 75 ILE 75 A PRO 76 n 76 PRO 76 A GLY 77 n 77 GLY 77 A THR 78 n 78 THR 78 A LYS 79 n 79 LYS 79 A MET 80 n 80 MET 80 A ILE 81 n 81 ILE 81 A PHE 82 n 82 PHE 82 A ALA 83 n 83 ALA 83 A GLY 84 n 84 GLY 84 A ILE 85 n 85 ILE 85 A LYS 86 n 86 LYS 86 A LYS 87 n 87 LYS 87 A LYS 88 n 88 LYS 88 A THR 89 n 89 THR 89 A GLU 90 n 90 GLU 90 A ARG 91 n 91 ARG 91 A GLU 92 n 92 GLU 92 A ASP 93 n 93 ASP 93 A LEU 94 n 94 LEU 94 A ILE 95 n 95 ILE 95 A ALA 96 n 96 ALA 96 A TYR 97 n 97 TYR 97 A LEU 98 n 98 LEU 98 A LYS 99 n 99 LYS 99 A LYS 100 n 100 LYS 100 A ALA 101 n 101 ALA 101 A THR 102 n 102 THR 102 A ASN 103 n 103 ASN 103 A GLU 104 n 104 GLU 104 A author_defined_assembly 1 monomeric 1100 -23 6350 A HIS 18 A NE2 HIS 18 1_555 A HEC 105 B FE HEC 1_555 A HEC 105 B NA HEC 1_555 92.0 A HIS 18 A NE2 HIS 18 1_555 A HEC 105 B FE HEC 1_555 A HEC 105 B NB HEC 1_555 78.6 A HEC 105 B NA HEC 1_555 A HEC 105 B FE HEC 1_555 A HEC 105 B NB HEC 1_555 89.8 A HIS 18 A NE2 HIS 18 1_555 A HEC 105 B FE HEC 1_555 A HEC 105 B NC HEC 1_555 80.6 A HEC 105 B NA HEC 1_555 A HEC 105 B FE HEC 1_555 A HEC 105 B NC HEC 1_555 172.5 A HEC 105 B NB HEC 1_555 A HEC 105 B FE HEC 1_555 A HEC 105 B NC HEC 1_555 89.6 A HIS 18 A NE2 HIS 18 1_555 A HEC 105 B FE HEC 1_555 A HEC 105 B ND HEC 1_555 93.9 A HEC 105 B NA HEC 1_555 A HEC 105 B FE HEC 1_555 A HEC 105 B ND HEC 1_555 89.3 A HEC 105 B NB HEC 1_555 A HEC 105 B FE HEC 1_555 A HEC 105 B ND HEC 1_555 172.4 A HEC 105 B NC HEC 1_555 A HEC 105 B FE HEC 1_555 A HEC 105 B ND HEC 1_555 90.3 A HIS 18 A NE2 HIS 18 1_555 A HEC 105 B FE HEC 1_555 A MET 80 A SD MET 80 1_555 152.0 A HEC 105 B NA HEC 1_555 A HEC 105 B FE HEC 1_555 A MET 80 A SD MET 80 1_555 112.5 A HEC 105 B NB HEC 1_555 A HEC 105 B FE HEC 1_555 A MET 80 A SD MET 80 1_555 113.4 A HEC 105 B NC HEC 1_555 A HEC 105 B FE HEC 1_555 A MET 80 A SD MET 80 1_555 74.5 A HEC 105 B ND HEC 1_555 A HEC 105 B FE HEC 1_555 A MET 80 A SD MET 80 1_555 73.8 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 identity operation 0.0000000000 0.0000000000 0.0000000000 1 A A H H1 ALA HOH 43 203 1.31 1 A A HA H2 ASN HOH 31 200 1.32 1 A ARG 38 0.308 SIDE CHAIN 1 A ARG 91 0.306 SIDE CHAIN 1 A VAL 3 -107.75 -68.05 1 A CYS 14 -101.92 40.96 1 A VAL 20 -136.19 -55.26 1 A LYS 27 -58.62 -142.21 1 A LEU 35 -47.72 175.81 1 A PHE 36 -2.41 72.10 1 A ARG 38 81.49 -42.63 1 A THR 40 -100.04 -61.99 1 A GLN 42 -55.51 -101.01 1 A PRO 44 -48.01 -17.87 1 A PHE 46 -64.29 -109.32 1 A THR 47 -150.47 18.67 1 A TYR 48 -44.23 157.94 1 A THR 49 -78.57 -155.31 1 A ASP 50 -90.04 54.70 1 A ALA 51 -167.32 -57.25 1 A LYS 55 -54.87 -152.48 1 A ILE 57 -89.66 -151.85 1 A TRP 59 -145.57 50.32 1 A LYS 60 -89.98 -132.06 1 A GLU 61 -80.52 -85.85 1 A MET 65 -30.28 -35.44 1 A PRO 71 -51.64 -78.36 1 A LYS 72 -39.80 -28.45 1 A ILE 75 -161.35 92.67 1 A PHE 82 179.91 107.92 1 A ALA 83 -105.46 73.23 1 A LYS 87 -48.33 -99.73 1 A LYS 88 179.98 -73.83 1 A ILE 95 -57.01 -76.46 model building X-PLOR refinement X-PLOR phasing X-PLOR CYTOCHROME C, HEME C CYTOCHROME C (OXIDIZED) FROM EQUUS CABALLUS, NMR, MINIMIZED AVERAGE STRUCTURE 1 Y N 2 N N 3 N N A VAL 3 A VAL 3 HELX_P A CYS 14 A CYS 14 1 NR 12 A LYS 60 A LYS 60 HELX_P A LEU 68 A LEU 68 1 60R 9 A ASN 70 A ASN 70 HELX_P A ILE 75 A ILE 75 5 70R 6 A LYS 88 A LYS 88 HELX_P A THR 102 A THR 102 1 CR 15 covale 1.810 A HEC 105 B CAB HEC 1_555 A CYS 14 A SG CYS 14 1_555 covale 1.810 A HEC 105 B CAC HEC 1_555 A CYS 17 A SG CYS 17 1_555 metalc 2.058 A HEC 105 B FE HEC 1_555 A HIS 18 A NE2 HIS 18 1_555 metalc 2.435 A HEC 105 B FE HEC 1_555 A MET 80 A SD MET 80 1_555 ELECTRON TRANSPORT ELECTRON TRANSPORT CYC_HORSE UNP 1 1 P00004 GDVEKGKKIFVQKCAQCHTVEKGGKHKTGPNLHGLFGRKTGQAPGFTYTDANKNKGITWKEETLMEYLENPKKYIPGTKM IFAGIKKKTEREDLIAYLKKATNE 1 104 1OCD 1 104 P00004 A 1 1 104 BINDING SITE FOR RESIDUE HEC A 105 Software 20 A CYS 14 A CYS 14 20 1_555 A CYS 17 A CYS 17 20 1_555 A HIS 18 A HIS 18 20 1_555 A PRO 30 A PRO 30 20 1_555 A THR 40 A THR 40 20 1_555 A GLN 42 A GLN 42 20 1_555 A THR 47 A THR 47 20 1_555 A TYR 48 A TYR 48 20 1_555 A THR 49 A THR 49 20 1_555 A ASN 52 A ASN 52 20 1_555 A TRP 59 A TRP 59 20 1_555 A LEU 64 A LEU 64 20 1_555 A TYR 67 A TYR 67 20 1_555 A LEU 68 A LEU 68 20 1_555 A THR 78 A THR 78 20 1_555 A LYS 79 A LYS 79 20 1_555 A MET 80 A MET 80 20 1_555 A PHE 82 A PHE 82 20 1_555 A ILE 85 A ILE 85 20 1_555 A LEU 94 A LEU 94 20 1_555 1 P 1