0.010256 0.000000 0.000000 0.000000 0.011136 0.000000 0.000000 0.000000 0.012500 0.00000 0.00000 0.00000 Klemm, J.D. Rould, M.A. Aurora, R. Herr, W. Pabo, C.O. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 97.500 89.800 80.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N O N 89 N P N 90 N O N 91 N O N 92 N O N 93 N C N 94 R C N 95 N O N 96 S C N 97 N O N 98 N C N 99 R C Y 100 N N Y 101 N C Y 102 N N Y 103 N C Y 104 N C N 105 N N Y 106 N N Y 107 N C Y 108 N N Y 109 N C N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N O N 125 N P N 126 N O N 127 N O N 128 N O N 129 N C N 130 R C N 131 N O N 132 S C N 133 N O N 134 N C N 135 R C N 136 N N N 137 N C N 138 N O N 139 N N N 140 N C N 141 N N N 142 N C N 143 N C N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N P N 160 N O N 161 N O N 162 N O N 163 N C N 164 R C N 165 N O N 166 S C N 167 N O N 168 N C N 169 R C Y 170 N N Y 171 N C Y 172 N N Y 173 N C N 174 N C N 175 N O N 176 N N N 177 N C N 178 N N N 179 N N Y 180 N C N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N O N 196 N P N 197 N O N 198 N O N 199 N O N 200 N C N 201 R C N 202 N O N 203 S C N 204 N O N 205 N C N 206 R C N 207 N N N 208 N C N 209 N O N 210 N N N 211 N C N 212 N O N 213 N C N 214 N C N 215 N C N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N N N 232 S C N 233 N C N 234 N O N 235 N C N 236 N C N 237 N C N 238 N O N 239 N N N 240 N O N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N N N 252 S C N 253 N C N 254 N O N 255 N C N 256 N C N 257 N C N 258 N O N 259 N O N 260 N O N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N N N 271 N C N 272 N C N 273 N O N 274 N O N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N N N 281 S C N 282 N C N 283 N O N 284 S C N 285 N C N 286 N C N 287 N C N 288 N O N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N N N 303 S C N 304 N C N 305 N O N 306 N C N 307 N C N 308 N C N 309 N C N 310 N O N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N N N 325 S C N 326 N C N 327 N O N 328 N C N 329 N C N 330 N C N 331 N C N 332 N N N 333 N O N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N N N 350 S C N 351 N C N 352 N O N 353 N C N 354 N C N 355 N S N 356 N C N 357 N O N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N N N 370 S C N 371 N C N 372 N O N 373 N C Y 374 N C Y 375 N C Y 376 N C Y 377 N C Y 378 N C Y 379 N C N 380 N O N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N N N 393 S C N 394 N C N 395 N O N 396 N C N 397 N C N 398 N C N 399 N O N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N N N 410 S C N 411 N C N 412 N O N 413 N C N 414 N O N 415 N O N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N N N 424 S C N 425 N C N 426 N O N 427 R C N 428 N O N 429 N C N 430 N O N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N N N 441 S C N 442 N C N 443 N O N 444 N C Y 445 N C Y 446 N C Y 447 N C Y 448 N N Y 449 N C Y 450 N C Y 451 N C Y 452 N C Y 453 N C N 454 N O N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N H N 465 N H N 466 N H N 467 N N N 468 S C N 469 N C N 470 N O N 471 N C Y 472 N C Y 473 N C Y 474 N C Y 475 N C Y 476 N C Y 477 N C N 478 N O N 479 N O N 480 N H N 481 N H N 482 N H N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 488 N H N 489 N H N 490 N H N 491 N N N 492 S C N 493 N C N 494 N O N 495 N C N 496 N C N 497 N C N 498 N O N 499 N H N 500 N H N 501 N H N 502 N H N 503 N H N 504 N H N 505 N H N 506 N H N 507 N H N 508 N H N 509 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing Y 106 N sing Y 107 N sing Y 108 N doub N 109 N sing Y 110 N sing Y 111 N sing Y 112 N doub N 113 N sing Y 114 N doub N 115 N sing N 116 N sing Y 117 N sing Y 118 N doub N 119 N sing Y 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing Y 179 N sing Y 180 N sing Y 181 N doub N 182 N sing Y 183 N sing N 184 N sing Y 185 N doub N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N doub N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N doub N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N doub N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N doub N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N doub N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N doub N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N doub N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N doub N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N doub N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N doub N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N doub N 370 N sing N 371 N sing N 372 N sing N 373 N sing Y 374 N doub Y 375 N sing Y 376 N sing N 377 N sing Y 378 N doub N 379 N sing Y 380 N doub N 381 N sing Y 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N doub N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N doub N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N doub N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N doub N 439 N sing N 440 N sing N 441 N sing N 442 N sing Y 443 N doub Y 444 N sing Y 445 N sing N 446 N sing Y 447 N doub Y 448 N sing Y 449 N sing N 450 N sing Y 451 N sing Y 452 N doub N 453 N sing Y 454 N doub N 455 N sing Y 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N doub N 467 N sing N 468 N sing N 469 N sing N 470 N sing Y 471 N doub Y 472 N sing Y 473 N sing N 474 N sing Y 475 N doub N 476 N sing Y 477 N doub N 478 N sing Y 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N sing N 490 N doub N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing N 497 N sing N 498 N sing N 499 N sing N 500 N sing N 501 N sing US Cell(Cambridge,Mass.) CELLB5 0998 0092-8674 77 21 32 10.1016/0092-8674(94)90231-3 8156594 Crystal structure of the Oct-1 POU domain bound to an octamer site: DNA recognition with tethered DNA-binding modules. 1994 10.2210/pdb1oct/pdb pdb_00001oct 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 SINGLE WAVELENGTH M x-ray 1 1.0 4657.060 DNA (5'-D(*TP*GP*TP*AP*TP*GP*CP*AP*AP*AP*TP*AP*AP*GP*G)-3') 1 syn polymer 4518.959 DNA (5'-D(*AP*CP*CP*TP*TP*AP*TP*TP*TP*GP*CP*AP*TP*AP*C)-3') 1 syn polymer 18014.621 PROTEIN (OCT-1 POU DOMAIN) 1 nat polymer no no (DT)(DG)(DT)(DA)(DT)(DG)(DC)(DA)(DA)(DA)(DT)(DA)(DA)(DG)(DG) TGTATGCAAATAAGG A polydeoxyribonucleotide no no (DA)(DC)(DC)(DT)(DT)(DA)(DT)(DT)(DT)(DG)(DC)(DA)(DT)(DA)(DC) ACCTTATTTGCATAC B polydeoxyribonucleotide no no DLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLS SPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINP DLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLS SPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINP C polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo sample 9606 Homo sapiens 3.18 61.34 -3.674 1 19 A 202 B 230 -0.228 A_DG202:DC230_B 1 -12.798 -0.052 0.496 0.062 -7.098 1 20 A 203 B 229 -8.459 A_DT203:DA229_B 2 -10.804 -0.433 0.495 0.200 -6.441 1 20 A 204 B 228 1.875 A_DA204:DT228_B 3 -8.256 -0.013 -0.029 -0.159 -2.533 1 20 A 205 B 227 -1.555 A_DT205:DA227_B 4 2.562 0.433 0.363 -0.325 0.253 1 19 A 206 B 226 -6.927 A_DG206:DC226_B 5 -16.199 0.302 0.172 -0.280 12.982 1 19 A 207 B 225 2.659 A_DC207:DG225_B 6 -9.939 0.032 -0.668 -0.035 15.964 1 20 A 208 B 224 4.176 A_DA208:DT224_B 7 -7.465 0.756 0.423 -0.095 0.783 1 20 A 209 B 223 6.985 A_DA209:DT223_B 8 -25.937 0.524 0.148 -0.115 -6.644 1 20 A 210 B 222 4.911 A_DA210:DT222_B 9 -12.936 -0.571 0.295 -0.076 -16.126 1 20 A 211 B 221 5.720 A_DT211:DA221_B 10 -19.463 0.181 0.318 -0.031 1.815 1 20 A 212 B 220 3.280 A_DA212:DT220_B 11 0.206 0.342 -0.003 -0.170 2.395 1 20 A 213 B 219 -3.185 A_DA213:DT219_B 12 -5.364 1.036 0.058 -0.035 2.968 1 19 A 214 B 218 3.886 A_DG214:DC218_B 13 -11.162 -0.042 0.424 -0.086 -1.539 1 19 A 215 B 217 -3.588 A_DG215:DC217_B 14 -5.980 -0.127 -0.062 -0.307 3.465 34.212 A A 202 203 0.572 B B 230 229 3.469 0.336 -0.226 -0.898 AA_DG202DT203:DA229DC230_BB 1 -0.790 1.343 34.201 -1.583 0.252 3.416 42.242 A A 203 204 -3.834 B B 229 228 3.420 -2.757 0.457 0.423 AA_DT203DA204:DT228DA229_BB 2 4.513 -6.277 41.924 0.883 -0.149 3.168 27.417 A A 204 205 14.811 B B 228 227 3.412 6.943 -0.232 -0.582 AA_DA204DT205:DA227DT228_BB 3 -1.468 3.132 26.500 -2.983 0.119 3.302 38.246 A A 205 206 13.071 B B 227 226 3.211 8.494 -1.179 0.510 AA_DT205DG206:DC226DA227_BB 4 -2.047 3.150 37.271 -0.300 1.540 3.143 39.211 A A 206 207 -14.609 B B 226 225 3.171 -9.576 1.079 0.467 AA_DG206DC207:DG225DC226_BB 5 11.415 -17.416 36.373 1.845 -0.237 3.212 38.418 A A 207 208 18.165 B B 225 224 3.380 11.748 0.875 0.355 AA_DC207DA208:DT224DG225_BB 6 -4.522 6.991 36.371 -0.979 -1.915 3.782 38.700 A A 208 209 -7.400 B B 224 223 3.812 -4.891 -0.985 0.227 AA_DA208DA209:DT223DT224_BB 7 -1.106 1.674 38.386 1.042 1.328 3.348 33.341 A A 209 210 -6.419 B B 223 222 3.408 -3.668 0.413 -0.277 AA_DA209DA210:DT222DT223_BB 8 -3.917 6.856 32.919 0.151 -1.397 3.732 35.003 A A 210 211 -0.471 B B 222 221 3.729 -0.283 -0.465 -0.529 AA_DA210DT211:DA221DT222_BB 9 0.073 -0.122 35.001 -0.832 0.786 2.943 39.991 A A 211 212 4.862 B B 221 220 2.806 3.313 -0.961 0.590 AA_DT211DA212:DT220DA221_BB 10 -5.272 7.738 39.523 0.526 0.871 3.089 33.850 A A 212 213 11.080 B B 220 219 3.169 6.414 -0.578 -0.183 AA_DA212DA213:DT219DT220_BB 11 -0.508 0.878 33.250 -1.313 0.914 3.099 31.111 A A 213 214 16.643 B B 219 218 3.479 8.771 0.490 -0.437 AA_DA213DG214:DC218DT219_BB 12 -5.071 9.622 29.454 -2.550 -1.917 3.495 36.224 A A 214 215 -8.656 B B 218 217 3.460 -5.353 0.136 -0.535 AA_DG214DG215:DC217DC218_BB 13 4.048 -6.547 35.617 -0.055 0.392 chem_comp_atom chem_comp_bond database_2 repository Initial release Version format compliance Version format compliance Data collection Database references 1 0 1994-08-31 1 1 2008-05-22 1 2 2011-07-13 1 3 2024-02-14 _database_2.pdbx_DOI _database_2.pdbx_database_accession BNL Y BNL 1994-05-09 REL T 201 n 1 DT 201 A G 202 n 2 DG 202 A T 203 n 3 DT 203 A A 204 n 4 DA 204 A T 205 n 5 DT 205 A G 206 n 6 DG 206 A C 207 n 7 DC 207 A A 208 n 8 DA 208 A A 209 n 9 DA 209 A A 210 n 10 DA 210 A T 211 n 11 DT 211 A A 212 n 12 DA 212 A A 213 n 13 DA 213 A G 214 n 14 DG 214 A G 215 n 15 DG 215 A A 216 n 1 DA 216 B C 217 n 2 DC 217 B C 218 n 3 DC 218 B T 219 n 4 DT 219 B T 220 n 5 DT 220 B A 221 n 6 DA 221 B T 222 n 7 DT 222 B T 223 n 8 DT 223 B T 224 n 9 DT 224 B G 225 n 10 DG 225 B C 226 n 11 DC 226 B A 227 n 12 DA 227 B T 228 n 13 DT 228 B A 229 n 14 DA 229 B C 230 n 15 DC 230 B ASP 5 n 1 ASP 5 C LEU 6 n 2 LEU 6 C GLU 7 n 3 GLU 7 C GLU 8 n 4 GLU 8 C LEU 9 n 5 LEU 9 C GLU 10 n 6 GLU 10 C GLN 11 n 7 GLN 11 C PHE 12 n 8 PHE 12 C ALA 13 n 9 ALA 13 C LYS 14 n 10 LYS 14 C THR 15 n 11 THR 15 C PHE 16 n 12 PHE 16 C LYS 17 n 13 LYS 17 C GLN 18 n 14 GLN 18 C ARG 19 n 15 ARG 19 C ARG 20 n 16 ARG 20 C ILE 21 n 17 ILE 21 C LYS 22 n 18 LYS 22 C LEU 23 n 19 LEU 23 C GLY 24 n 20 GLY 24 C PHE 25 n 21 PHE 25 C THR 26 n 22 THR 26 C GLN 27 n 23 GLN 27 C GLY 28 n 24 GLY 28 C ASP 29 n 25 ASP 29 C VAL 30 n 26 VAL 30 C GLY 31 n 27 GLY 31 C LEU 32 n 28 LEU 32 C ALA 33 n 29 ALA 33 C MET 34 n 30 MET 34 C GLY 35 n 31 GLY 35 C LYS 36 n 32 LYS 36 C LEU 37 n 33 LEU 37 C TYR 38 n 34 TYR 38 C GLY 39 n 35 GLY 39 C ASN 40 n 36 ASN 40 C ASP 41 n 37 ASP 41 C PHE 42 n 38 PHE 42 C SER 43 n 39 SER 43 C GLN 44 n 40 GLN 44 C THR 45 n 41 THR 45 C THR 46 n 42 THR 46 C ILE 47 n 43 ILE 47 C SER 48 n 44 SER 48 C ARG 49 n 45 ARG 49 C PHE 50 n 46 PHE 50 C GLU 51 n 47 GLU 51 C ALA 52 n 48 ALA 52 C LEU 53 n 49 LEU 53 C ASN 54 n 50 ASN 54 C LEU 55 n 51 LEU 55 C SER 56 n 52 SER 56 C PHE 57 n 53 PHE 57 C LYS 58 n 54 LYS 58 C ASN 59 n 55 ASN 59 C MET 60 n 56 MET 60 C CYS 61 n 57 CYS 61 C LYS 62 n 58 LYS 62 C LEU 63 n 59 LEU 63 C LYS 64 n 60 LYS 64 C PRO 65 n 61 PRO 65 C LEU 66 n 62 LEU 66 C LEU 67 n 63 LEU 67 C GLU 68 n 64 GLU 68 C LYS 69 n 65 LYS 69 C TRP 70 n 66 TRP 70 C LEU 71 n 67 LEU 71 C ASN 72 n 68 ASN 72 C ASP 73 n 69 ASP 73 C ALA 74 n 70 ALA 74 C GLU 75 n 71 GLU 75 C n 72 77 C n 73 78 C n 74 79 C n 75 80 C n 76 81 C n 77 82 C n 78 83 C n 79 84 C n 80 85 C n 81 86 C n 82 87 C n 83 88 C n 84 89 C n 85 90 C n 86 91 C n 87 92 C n 88 93 C n 89 94 C n 90 95 C n 91 96 C n 92 97 C n 93 98 C n 94 99 C n 95 100 C n 96 101 C ARG 102 n 97 ARG 102 C LYS 103 n 98 LYS 103 C LYS 104 n 99 LYS 104 C ARG 105 n 100 ARG 105 C THR 106 n 101 THR 106 C SER 107 n 102 SER 107 C ILE 108 n 103 ILE 108 C GLU 109 n 104 GLU 109 C THR 110 n 105 THR 110 C ASN 111 n 106 ASN 111 C ILE 112 n 107 ILE 112 C ARG 113 n 108 ARG 113 C VAL 114 n 109 VAL 114 C ALA 115 n 110 ALA 115 C LEU 116 n 111 LEU 116 C GLU 117 n 112 GLU 117 C LYS 118 n 113 LYS 118 C SER 119 n 114 SER 119 C PHE 120 n 115 PHE 120 C LEU 121 n 116 LEU 121 C GLU 122 n 117 GLU 122 C ASN 123 n 118 ASN 123 C GLN 124 n 119 GLN 124 C LYS 125 n 120 LYS 125 C PRO 126 n 121 PRO 126 C THR 127 n 122 THR 127 C SER 128 n 123 SER 128 C GLU 129 n 124 GLU 129 C GLU 130 n 125 GLU 130 C ILE 131 n 126 ILE 131 C THR 132 n 127 THR 132 C MET 133 n 128 MET 133 C ILE 134 n 129 ILE 134 C ALA 135 n 130 ALA 135 C ASP 136 n 131 ASP 136 C GLN 137 n 132 GLN 137 C LEU 138 n 133 LEU 138 C ASN 139 n 134 ASN 139 C MET 140 n 135 MET 140 C GLU 141 n 136 GLU 141 C LYS 142 n 137 LYS 142 C GLU 143 n 138 GLU 143 C VAL 144 n 139 VAL 144 C ILE 145 n 140 ILE 145 C ARG 146 n 141 ARG 146 C VAL 147 n 142 VAL 147 C TRP 148 n 143 TRP 148 C PHE 149 n 144 PHE 149 C CYS 150 n 145 CYS 150 C ASN 151 n 146 ASN 151 C ARG 152 n 147 ARG 152 C ARG 153 n 148 ARG 153 C GLN 154 n 149 GLN 154 C LYS 155 n 150 LYS 155 C GLU 156 n 151 GLU 156 C LYS 157 n 152 LYS 157 C ARG 158 n 153 ARG 158 C ILE 159 n 154 ILE 159 C ASN 160 n 155 ASN 160 C PRO 161 n 156 PRO 161 C author_defined_assembly 3 trimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 C CG LYS 22 C CG LYS 18 1 Y 1 C CD LYS 22 C CD LYS 18 1 Y 1 C CE LYS 22 C CE LYS 18 1 Y 1 C NZ LYS 22 C NZ LYS 18 1 Y 1 C CG LYS 36 C CG LYS 32 1 Y 1 C CD LYS 36 C CD LYS 32 1 Y 1 C CE LYS 36 C CE LYS 32 1 Y 1 C NZ LYS 36 C NZ LYS 32 1 Y 1 C CG LYS 58 C CG LYS 54 1 Y 1 C CD LYS 58 C CD LYS 54 1 Y 1 C CE LYS 58 C CE LYS 54 1 Y 1 C NZ LYS 58 C NZ LYS 54 1 Y 1 C CG LYS 104 C CG LYS 99 1 Y 1 C CD LYS 104 C CD LYS 99 1 Y 1 C CE LYS 104 C CE LYS 99 1 Y 1 C NZ LYS 104 C NZ LYS 99 1 Y 1 C CG LYS 118 C CG LYS 113 1 Y 1 C CD LYS 118 C CD LYS 113 1 Y 1 C CE LYS 118 C CE LYS 113 1 Y 1 C NZ LYS 118 C NZ LYS 113 1 Y 1 C CG GLN 154 C CG GLN 149 1 Y 1 C CD GLN 154 C CD GLN 149 1 Y 1 C OE1 GLN 154 C OE1 GLN 149 1 Y 1 C NE2 GLN 154 C NE2 GLN 149 1 Y 1 C ASN 77 C ASN 72 1 Y 1 C LEU 78 C LEU 73 1 Y 1 C SER 79 C SER 74 1 Y 1 C SER 80 C SER 75 1 Y 1 C ASP 81 C ASP 76 1 Y 1 C SER 82 C SER 77 1 Y 1 C SER 83 C SER 78 1 Y 1 C LEU 84 C LEU 79 1 Y 1 C SER 85 C SER 80 1 Y 1 C SER 86 C SER 81 1 Y 1 C PRO 87 C PRO 82 1 Y 1 C SER 88 C SER 83 1 Y 1 C ALA 89 C ALA 84 1 Y 1 C LEU 90 C LEU 85 1 Y 1 C ASN 91 C ASN 86 1 Y 1 C SER 92 C SER 87 1 Y 1 C PRO 93 C PRO 88 1 Y 1 C GLY 94 C GLY 89 1 Y 1 C ILE 95 C ILE 90 1 Y 1 C GLU 96 C GLU 91 1 Y 1 C GLY 97 C GLY 92 1 Y 1 C LEU 98 C LEU 93 1 Y 1 C SER 99 C SER 94 1 Y 1 C ARG 100 C ARG 95 1 Y 1 C ARG 101 C ARG 96 1 Y 1 -5.06 0.70 102.20 97.14 A A A C4' C3' C2' DT DT DT 201 201 201 N 1 1.84 0.30 108.30 110.14 A A A O4' C1' N1 DT DT DT 201 201 201 N 1 -2.75 0.40 104.50 101.75 A A A O4' C4' C3' DG DG DG 202 202 202 N 1 5.90 0.90 103.10 109.00 A A A C4' C3' C2' DG DG DG 202 202 202 N 1 -7.78 1.20 119.70 111.92 A A A C3' O3' P DG DG DT 202 202 203 Y 1 -10.08 1.60 120.90 110.82 A A A P O5' C5' DA DA DA 204 204 204 N 1 -4.21 0.70 108.00 103.79 A A A O4' C1' N9 DA DA DA 204 204 204 N 1 -3.69 0.60 122.90 119.21 A A A C6 C5 C7 DT DT DT 205 205 205 N 1 -9.61 1.60 120.90 111.29 A A A P O5' C5' DC DC DC 207 207 207 N 1 -5.33 0.80 109.40 104.07 A A A O5' C5' C4' DA DA DA 208 208 208 N 1 -5.54 0.80 102.40 96.86 A A A C3' C2' C1' DA DA DA 208 208 208 N 1 -6.42 0.80 105.90 99.48 A A A O4' C1' C2' DA DA DA 208 208 208 N 1 5.41 0.30 108.30 113.71 A A A O4' C1' N9 DA DA DA 209 209 209 N 1 -10.08 1.60 120.90 110.82 A A A P O5' C5' DA DA DA 210 210 210 N 1 1.97 0.30 108.30 110.27 A A A O4' C1' N9 DA DA DA 210 210 210 N 1 -4.48 0.70 108.00 103.52 A A A O4' C1' N9 DA DA DA 212 212 212 N 1 2.44 0.30 108.30 110.74 A A A O4' C1' N9 DG DG DG 214 214 214 N 1 4.96 0.50 106.80 111.76 B B B O4' C1' C2' DA DA DA 216 216 216 N 1 -8.74 1.20 119.70 110.96 B B B C3' O3' P DA DA DC 216 216 217 Y 1 -12.02 1.90 104.00 91.98 B B B O3' P O5' DA DC DC 216 217 217 Y 1 -6.90 0.40 104.50 97.60 B B B O4' C4' C3' DC DC DC 217 217 217 N 1 7.92 1.10 109.80 117.72 B B B C5' C4' O4' DC DC DC 217 217 217 N 1 -9.32 1.00 110.10 100.78 B B B C1' O4' C4' DC DC DC 217 217 217 N 1 5.38 0.30 108.30 113.68 B B B O4' C1' N1 DC DC DC 217 217 217 N 1 -10.15 1.60 120.90 110.75 B B B P O5' C5' DC DC DC 218 218 218 N 1 -12.92 1.60 120.90 107.98 B B B P O5' C5' DT DT DT 219 219 219 N 1 -5.02 0.80 109.40 104.38 B B B O5' C5' C4' DT DT DT 220 220 220 N 1 -4.26 0.60 122.30 118.04 B B B N3 C2 O2 DT DT DT 222 222 222 N 1 -5.17 0.70 108.00 102.83 B B B O4' C1' N1 DT DT DT 223 223 223 N 1 -5.67 0.80 109.40 103.73 B B B O5' C5' C4' DT DT DT 224 224 224 N 1 -7.32 1.00 110.10 102.78 B B B C1' O4' C4' DT DT DT 224 224 224 N 1 3.73 0.60 119.90 123.63 B B B N3 C4 O4 DT DT DT 224 224 224 N 1 -3.81 0.60 119.00 115.19 B B B C4 C5 C7 DT DT DT 224 224 224 N 1 -11.44 1.60 120.90 109.46 B B B P O5' C5' DG DG DG 225 225 225 N 1 -4.42 0.70 108.00 103.58 B B B O4' C1' N9 DG DG DG 225 225 225 N 1 -5.38 0.70 108.00 102.62 B B B O4' C1' N9 DA DA DA 227 227 227 N 1 -5.56 0.80 102.40 96.84 B B B C3' C2' C1' DT DT DT 228 228 228 N 1 2.75 0.30 108.30 111.05 B B B O4' C1' N1 DT DT DT 228 228 228 N 1 -5.03 0.80 102.40 97.37 B B B C3' C2' C1' DA DA DA 229 229 229 N 1 2.02 0.30 108.30 110.32 B B B O4' C1' N9 DA DA DA 229 229 229 N 1 -3.31 0.40 104.50 101.19 B B B O4' C4' C3' DC DC DC 230 230 230 N 1 -5.81 0.80 102.40 96.59 B B B C3' C2' C1' DC DC DC 230 230 230 N 1 A A O3' C3' DG DG 202 202 -0.043 0.006 1.419 1.376 N 1 A A O3' C3' DA DA 208 208 -0.057 0.006 1.419 1.362 N 1 A A O3' C3' DA DA 209 209 -0.058 0.006 1.419 1.361 N 1 A A O3' C3' DA DA 210 210 -0.038 0.006 1.419 1.381 N 1 B B O3' C3' DA DA 216 216 -0.046 0.006 1.419 1.373 N 1 C LEU 6 -45.21 -84.59 1 C LEU 23 -62.90 6.40 1 C LYS 36 -81.15 37.90 1 C LEU 37 -146.09 -19.44 1 C TYR 38 -148.13 -2.64 1 C ASN 54 -95.82 51.93 1 C ASN 139 51.81 -3.03 0.2370000 0.2370000 3.000 20.000 6998 1 0.000 3.000 20.000 0 1670 0 609 1061 0.013 0.006 2.500 1.200 refinement X-PLOR refinement TNT CRYSTAL STRUCTURE OF THE OCT-1 POU DOMAIN BOUND TO AN OCTAMER SITE: DNA RECOGNITION WITH TETHERED DNA-BINDING MODULES 1 N N 2 N N 3 N N C ASP 5 C ASP 1 HELX_P C GLY 24 C GLY 20 1 S1 20 C GLN 27 C GLN 23 HELX_P C LEU 37 C LEU 33 1 S2 11 C GLN 44 C GLN 40 HELX_P C ALA 52 C ALA 48 1 S3 9 C PHE 57 C PHE 53 HELX_P C ALA 74 C ALA 70 1 S4 18 C THR 110 C THR 105 HELX_P C GLU 122 C GLU 117 1 H1 13 C SER 128 C SER 123 HELX_P C GLN 137 C GLN 132 1 H2 10 C LYS 142 C LYS 137 HELX_P C ASN 160 C ASN 155 1 H3 19 hydrog WATSON-CRICK A DG 202 A N1 DG 2 1_555 B DC 230 B N3 DC 15 1_555 hydrog WATSON-CRICK A DG 202 A N2 DG 2 1_555 B DC 230 B O2 DC 15 1_555 hydrog WATSON-CRICK A DG 202 A O6 DG 2 1_555 B DC 230 B N4 DC 15 1_555 hydrog WATSON-CRICK A DT 203 A N3 DT 3 1_555 B DA 229 B N1 DA 14 1_555 hydrog WATSON-CRICK A DT 203 A O4 DT 3 1_555 B DA 229 B N6 DA 14 1_555 hydrog WATSON-CRICK A DA 204 A N1 DA 4 1_555 B DT 228 B N3 DT 13 1_555 hydrog WATSON-CRICK A DA 204 A N6 DA 4 1_555 B DT 228 B O4 DT 13 1_555 hydrog WATSON-CRICK A DT 205 A N3 DT 5 1_555 B DA 227 B N1 DA 12 1_555 hydrog WATSON-CRICK A DT 205 A O4 DT 5 1_555 B DA 227 B N6 DA 12 1_555 hydrog WATSON-CRICK A DG 206 A N1 DG 6 1_555 B DC 226 B N3 DC 11 1_555 hydrog WATSON-CRICK A DG 206 A N2 DG 6 1_555 B DC 226 B O2 DC 11 1_555 hydrog WATSON-CRICK A DG 206 A O6 DG 6 1_555 B DC 226 B N4 DC 11 1_555 hydrog WATSON-CRICK A DC 207 A N3 DC 7 1_555 B DG 225 B N1 DG 10 1_555 hydrog WATSON-CRICK A DC 207 A N4 DC 7 1_555 B DG 225 B O6 DG 10 1_555 hydrog WATSON-CRICK A DC 207 A O2 DC 7 1_555 B DG 225 B N2 DG 10 1_555 hydrog WATSON-CRICK A DA 208 A N1 DA 8 1_555 B DT 224 B N3 DT 9 1_555 hydrog WATSON-CRICK A DA 208 A N6 DA 8 1_555 B DT 224 B O4 DT 9 1_555 hydrog WATSON-CRICK A DA 209 A N1 DA 9 1_555 B DT 223 B N3 DT 8 1_555 hydrog WATSON-CRICK A DA 209 A N6 DA 9 1_555 B DT 223 B O4 DT 8 1_555 hydrog WATSON-CRICK A DA 210 A N1 DA 10 1_555 B DT 222 B N3 DT 7 1_555 hydrog WATSON-CRICK A DA 210 A N6 DA 10 1_555 B DT 222 B O4 DT 7 1_555 hydrog WATSON-CRICK A DT 211 A N3 DT 11 1_555 B DA 221 B N1 DA 6 1_555 hydrog WATSON-CRICK A DT 211 A O4 DT 11 1_555 B DA 221 B N6 DA 6 1_555 hydrog WATSON-CRICK A DA 212 A N1 DA 12 1_555 B DT 220 B N3 DT 5 1_555 hydrog WATSON-CRICK A DA 212 A N6 DA 12 1_555 B DT 220 B O4 DT 5 1_555 hydrog WATSON-CRICK A DA 213 A N1 DA 13 1_555 B DT 219 B N3 DT 4 1_555 hydrog WATSON-CRICK A DA 213 A N6 DA 13 1_555 B DT 219 B O4 DT 4 1_555 hydrog WATSON-CRICK A DG 214 A N1 DG 14 1_555 B DC 218 B N3 DC 3 1_555 hydrog WATSON-CRICK A DG 214 A N2 DG 14 1_555 B DC 218 B O2 DC 3 1_555 hydrog WATSON-CRICK A DG 214 A O6 DG 14 1_555 B DC 218 B N4 DC 3 1_555 hydrog WATSON-CRICK A DG 215 A N1 DG 15 1_555 B DC 217 B N3 DC 2 1_555 hydrog WATSON-CRICK A DG 215 A N2 DG 15 1_555 B DC 217 B O2 DC 2 1_555 hydrog WATSON-CRICK A DG 215 A O6 DG 15 1_555 B DC 217 B N4 DC 2 1_555 TRANSCRIPTION/DNA PROTEIN-DNA COMPLEX, TRANSCRIPTION-DNA COMPLEX PO2F1_HUMAN UNP 3 P14859 1OCT PDB 1 1OCT 1OCT PDB 2 1OCT 284 439 1OCT 5 161 P14859 C 1 1 156 201 215 1OCT 201 215 1OCT A 2 1 15 216 230 1OCT 216 230 1OCT B 3 1 15 20 C 2 2 21