0.008642
0.004989
0.000000
0.000000
0.009979
0.000000
0.000000
0.000000
0.008646
0.00000
0.00000
0.00000
Takahashi, H.
Inagaki, E.
Miyano, M.
Tahirov, T.H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
18
90.00
90.00
120.00
115.715
115.715
115.661
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C11 H23 N2 O7 P S
358.348
4'-PHOSPHOPANTETHEINE
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
S
C
N
125
N
C
N
126
N
O
N
127
N
C
Y
128
N
C
Y
129
N
N
Y
130
N
C
Y
131
N
C
Y
132
N
N
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
S
C
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
S
C
N
171
N
C
N
172
N
O
N
173
N
C
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
O
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
N
N
192
S
C
N
193
N
C
N
194
N
O
N
195
N
C
N
196
N
C
N
197
N
C
N
198
N
C
N
199
N
N
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
N
N
217
S
C
N
218
N
C
N
219
N
O
N
220
N
C
N
221
N
C
N
222
N
S
N
223
N
C
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
N
N
237
S
C
N
238
N
C
N
239
N
O
N
240
N
C
Y
241
N
C
Y
242
N
C
Y
243
N
C
Y
244
N
C
Y
245
N
C
Y
246
N
C
N
247
N
O
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
O
N
260
N
P
N
261
N
O
N
262
N
O
N
263
N
O
N
264
N
C
N
265
N
C
N
266
N
C
N
267
N
C
N
268
R
C
N
269
N
O
N
270
N
C
N
271
N
O
N
272
N
N
N
273
N
C
N
274
N
C
N
275
N
C
N
276
N
O
N
277
N
N
N
278
N
C
N
279
N
C
N
280
N
S
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
N
C
N
309
N
C
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
N
326
N
O
N
327
N
O
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
S
N
336
N
O
N
337
N
O
N
338
N
O
N
339
N
O
N
340
N
N
N
341
S
C
N
342
N
C
N
343
N
O
N
344
R
C
N
345
N
O
N
346
N
C
N
347
N
O
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
N
N
358
S
C
N
359
N
C
N
360
N
O
N
361
N
C
Y
362
N
C
Y
363
N
C
Y
364
N
C
Y
365
N
C
Y
366
N
C
Y
367
N
C
N
368
N
O
N
369
N
O
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
N
N
382
S
C
N
383
N
C
N
384
N
O
N
385
N
C
N
386
N
C
N
387
N
C
N
388
N
O
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
Y
235
N
doub
Y
236
N
sing
Y
237
N
sing
N
238
N
sing
Y
239
N
doub
N
240
N
sing
Y
241
N
doub
N
242
N
sing
Y
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
doub
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
doub
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
doub
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
doub
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
doub
N
322
N
doub
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
doub
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
doub
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
Y
352
N
doub
Y
353
N
sing
Y
354
N
sing
N
355
N
sing
Y
356
N
doub
N
357
N
sing
Y
358
N
doub
N
359
N
sing
Y
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
doub
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
60
97
10.1107/S0907444903025319
14684898
Structure and Implications for the Thermal Stability of Phosphopantetheine Adenylyltransferase from Thermus Thermophilus.
2004
10.2210/pdb1od6/pdb
pdb_00001od6
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.0
1
IMAGE PLATE
2002-12-15
RIGAKU IMAGE PLATE
SINGLE WAVELENGTH
M
x-ray
1
1.0
1.0
BL26B1
SPring-8
1.0
SYNCHROTRON
SPRING-8 BEAMLINE BL26B1
17730.471
PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE
2.7.7.3
1
man
polymer
358.348
4'-PHOSPHOPANTETHEINE
1
syn
non-polymer
96.063
SULFATE ION
3
syn
non-polymer
18.015
water
162
nat
water
PPAT
no
no
MHVVYPGSFDPLTNGHLDVIQRASRLFEKVTVAVLENPSKRGQYLFSAEERLAIIREATAHLANVEAATFSGLLVDFVRR
VGAQAIVKGLRAVSDYEYELQMAHLNRQLYPGLETLFILAATRYSFVSSTMVKEIARYGGDVSKLVPPATLRALKAKLGQ
MHVVYPGSFDPLTNGHLDVIQRASRLFEKVTVAVLENPSKRGQYLFSAEERLAIIREATAHLANVEAATFSGLLVDFVRR
VGAQAIVKGLRAVSDYEYELQMAHLNRQLYPGLETLFILAATRYSFVSSTMVKEIARYGGDVSKLVPPATLRALKAKLGQ
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
HB8
sample
300852
THERMUS THERMOPHILUS
469008
ESCHERICHIA COLI
BL21(DE3)
PET 11A
1
4.2
70
6.30
PROTEIN WAS CRYSTALLIZED FROM 1.1M LISULF, 100 MM MES, PH 6.25.
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_initial_refinement_model
struct_site
repository
Initial release
Database references
Derived calculations
Non-polymer description
Other
Refinement description
Structure summary
Version format compliance
Data collection
Database references
Derived calculations
Other
Refinement description
1
0
2003-03-13
1
1
2015-12-16
1
2
2023-12-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_sf
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE IN COMPLEX WITH 3'- DEPHOSPHO-COA FROM ESCHERICHIA COLI
PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE IN COMPLEX WITH MN2+ATP FROM ESCHERICHIA COLI
PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE IN COMPLEX WITH COENZYME A FROM ESCHERICHIA COLI
PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE FROM ESCHERICHIA COLI
PDBE
Y
PDBE
2003-02-13
REL
REL
PNS
4'-PHOSPHOPANTETHEINE
SO4
SULFATE ION
HOH
water
1QJC
PDB ENTRY 1QJC
PDB
experimental model
PNS
1161
2
PNS
PNS
1161
A
SO4
1162
3
SO4
SO4
1162
A
SO4
1163
3
SO4
SO4
1163
A
SO4
1164
3
SO4
SO4
1164
A
HOH
2001
4
HOH
HOH
2001
A
HOH
2002
4
HOH
HOH
2002
A
HOH
2003
4
HOH
HOH
2003
A
HOH
2004
4
HOH
HOH
2004
A
HOH
2005
4
HOH
HOH
2005
A
HOH
2006
4
HOH
HOH
2006
A
HOH
2007
4
HOH
HOH
2007
A
HOH
2008
4
HOH
HOH
2008
A
HOH
2009
4
HOH
HOH
2009
A
HOH
2010
4
HOH
HOH
2010
A
HOH
2011
4
HOH
HOH
2011
A
HOH
2012
4
HOH
HOH
2012
A
HOH
2013
4
HOH
HOH
2013
A
HOH
2014
4
HOH
HOH
2014
A
HOH
2015
4
HOH
HOH
2015
A
HOH
2016
4
HOH
HOH
2016
A
HOH
2017
4
HOH
HOH
2017
A
HOH
2018
4
HOH
HOH
2018
A
HOH
2019
4
HOH
HOH
2019
A
HOH
2020
4
HOH
HOH
2020
A
HOH
2021
4
HOH
HOH
2021
A
HOH
2022
4
HOH
HOH
2022
A
HOH
2023
4
HOH
HOH
2023
A
HOH
2024
4
HOH
HOH
2024
A
HOH
2025
4
HOH
HOH
2025
A
HOH
2026
4
HOH
HOH
2026
A
HOH
2027
4
HOH
HOH
2027
A
HOH
2028
4
HOH
HOH
2028
A
HOH
2029
4
HOH
HOH
2029
A
HOH
2030
4
HOH
HOH
2030
A
HOH
2031
4
HOH
HOH
2031
A
HOH
2032
4
HOH
HOH
2032
A
HOH
2033
4
HOH
HOH
2033
A
HOH
2034
4
HOH
HOH
2034
A
HOH
2035
4
HOH
HOH
2035
A
HOH
2036
4
HOH
HOH
2036
A
HOH
2037
4
HOH
HOH
2037
A
HOH
2038
4
HOH
HOH
2038
A
HOH
2039
4
HOH
HOH
2039
A
HOH
2040
4
HOH
HOH
2040
A
HOH
2041
4
HOH
HOH
2041
A
HOH
2042
4
HOH
HOH
2042
A
HOH
2043
4
HOH
HOH
2043
A
HOH
2044
4
HOH
HOH
2044
A
HOH
2045
4
HOH
HOH
2045
A
HOH
2046
4
HOH
HOH
2046
A
HOH
2047
4
HOH
HOH
2047
A
HOH
2048
4
HOH
HOH
2048
A
HOH
2049
4
HOH
HOH
2049
A
HOH
2050
4
HOH
HOH
2050
A
HOH
2051
4
HOH
HOH
2051
A
HOH
2052
4
HOH
HOH
2052
A
HOH
2053
4
HOH
HOH
2053
A
HOH
2054
4
HOH
HOH
2054
A
HOH
2055
4
HOH
HOH
2055
A
HOH
2056
4
HOH
HOH
2056
A
HOH
2057
4
HOH
HOH
2057
A
HOH
2058
4
HOH
HOH
2058
A
HOH
2059
4
HOH
HOH
2059
A
HOH
2060
4
HOH
HOH
2060
A
HOH
2061
4
HOH
HOH
2061
A
HOH
2062
4
HOH
HOH
2062
A
HOH
2063
4
HOH
HOH
2063
A
HOH
2064
4
HOH
HOH
2064
A
HOH
2065
4
HOH
HOH
2065
A
HOH
2066
4
HOH
HOH
2066
A
HOH
2067
4
HOH
HOH
2067
A
HOH
2068
4
HOH
HOH
2068
A
HOH
2069
4
HOH
HOH
2069
A
HOH
2070
4
HOH
HOH
2070
A
HOH
2071
4
HOH
HOH
2071
A
HOH
2072
4
HOH
HOH
2072
A
HOH
2073
4
HOH
HOH
2073
A
HOH
2074
4
HOH
HOH
2074
A
HOH
2075
4
HOH
HOH
2075
A
HOH
2076
4
HOH
HOH
2076
A
HOH
2077
4
HOH
HOH
2077
A
HOH
2078
4
HOH
HOH
2078
A
HOH
2079
4
HOH
HOH
2079
A
HOH
2080
4
HOH
HOH
2080
A
HOH
2081
4
HOH
HOH
2081
A
HOH
2082
4
HOH
HOH
2082
A
HOH
2083
4
HOH
HOH
2083
A
HOH
2084
4
HOH
HOH
2084
A
HOH
2085
4
HOH
HOH
2085
A
HOH
2086
4
HOH
HOH
2086
A
HOH
2087
4
HOH
HOH
2087
A
HOH
2088
4
HOH
HOH
2088
A
HOH
2089
4
HOH
HOH
2089
A
HOH
2090
4
HOH
HOH
2090
A
HOH
2091
4
HOH
HOH
2091
A
HOH
2092
4
HOH
HOH
2092
A
HOH
2093
4
HOH
HOH
2093
A
HOH
2094
4
HOH
HOH
2094
A
HOH
2095
4
HOH
HOH
2095
A
HOH
2096
4
HOH
HOH
2096
A
HOH
2097
4
HOH
HOH
2097
A
HOH
2098
4
HOH
HOH
2098
A
HOH
2099
4
HOH
HOH
2099
A
HOH
2100
4
HOH
HOH
2100
A
HOH
2101
4
HOH
HOH
2101
A
HOH
2102
4
HOH
HOH
2102
A
HOH
2103
4
HOH
HOH
2103
A
HOH
2104
4
HOH
HOH
2104
A
HOH
2105
4
HOH
HOH
2105
A
HOH
2106
4
HOH
HOH
2106
A
HOH
2107
4
HOH
HOH
2107
A
HOH
2108
4
HOH
HOH
2108
A
HOH
2109
4
HOH
HOH
2109
A
HOH
2110
4
HOH
HOH
2110
A
HOH
2111
4
HOH
HOH
2111
A
HOH
2112
4
HOH
HOH
2112
A
HOH
2113
4
HOH
HOH
2113
A
HOH
2114
4
HOH
HOH
2114
A
HOH
2115
4
HOH
HOH
2115
A
HOH
2116
4
HOH
HOH
2116
A
HOH
2117
4
HOH
HOH
2117
A
HOH
2118
4
HOH
HOH
2118
A
HOH
2119
4
HOH
HOH
2119
A
HOH
2120
4
HOH
HOH
2120
A
HOH
2121
4
HOH
HOH
2121
A
HOH
2122
4
HOH
HOH
2122
A
HOH
2123
4
HOH
HOH
2123
A
HOH
2124
4
HOH
HOH
2124
A
HOH
2125
4
HOH
HOH
2125
A
HOH
2126
4
HOH
HOH
2126
A
HOH
2127
4
HOH
HOH
2127
A
HOH
2128
4
HOH
HOH
2128
A
HOH
2129
4
HOH
HOH
2129
A
HOH
2130
4
HOH
HOH
2130
A
HOH
2131
4
HOH
HOH
2131
A
HOH
2132
4
HOH
HOH
2132
A
HOH
2133
4
HOH
HOH
2133
A
HOH
2134
4
HOH
HOH
2134
A
HOH
2135
4
HOH
HOH
2135
A
HOH
2136
4
HOH
HOH
2136
A
HOH
2137
4
HOH
HOH
2137
A
HOH
2138
4
HOH
HOH
2138
A
HOH
2139
4
HOH
HOH
2139
A
HOH
2140
4
HOH
HOH
2140
A
HOH
2141
4
HOH
HOH
2141
A
HOH
2142
4
HOH
HOH
2142
A
HOH
2143
4
HOH
HOH
2143
A
HOH
2144
4
HOH
HOH
2144
A
HOH
2145
4
HOH
HOH
2145
A
HOH
2146
4
HOH
HOH
2146
A
HOH
2147
4
HOH
HOH
2147
A
HOH
2148
4
HOH
HOH
2148
A
HOH
2149
4
HOH
HOH
2149
A
HOH
2150
4
HOH
HOH
2150
A
HOH
2151
4
HOH
HOH
2151
A
HOH
2152
4
HOH
HOH
2152
A
HOH
2153
4
HOH
HOH
2153
A
HOH
2154
4
HOH
HOH
2154
A
HOH
2155
4
HOH
HOH
2155
A
HOH
2156
4
HOH
HOH
2156
A
HOH
2157
4
HOH
HOH
2157
A
HOH
2158
4
HOH
HOH
2158
A
HOH
2159
4
HOH
HOH
2159
A
HOH
2160
4
HOH
HOH
2160
A
HOH
2161
4
HOH
HOH
2161
A
HOH
2162
4
HOH
HOH
2162
A
MET
1
n
1
MET
1
A
HIS
2
n
2
HIS
2
A
VAL
3
n
3
VAL
3
A
VAL
4
n
4
VAL
4
A
TYR
5
n
5
TYR
5
A
PRO
6
n
6
PRO
6
A
GLY
7
n
7
GLY
7
A
SER
8
n
8
SER
8
A
PHE
9
n
9
PHE
9
A
ASP
10
n
10
ASP
10
A
PRO
11
n
11
PRO
11
A
LEU
12
n
12
LEU
12
A
THR
13
n
13
THR
13
A
ASN
14
n
14
ASN
14
A
GLY
15
n
15
GLY
15
A
HIS
16
n
16
HIS
16
A
LEU
17
n
17
LEU
17
A
ASP
18
n
18
ASP
18
A
VAL
19
n
19
VAL
19
A
ILE
20
n
20
ILE
20
A
GLN
21
n
21
GLN
21
A
ARG
22
n
22
ARG
22
A
ALA
23
n
23
ALA
23
A
SER
24
n
24
SER
24
A
ARG
25
n
25
ARG
25
A
LEU
26
n
26
LEU
26
A
PHE
27
n
27
PHE
27
A
GLU
28
n
28
GLU
28
A
LYS
29
n
29
LYS
29
A
VAL
30
n
30
VAL
30
A
THR
31
n
31
THR
31
A
VAL
32
n
32
VAL
32
A
ALA
33
n
33
ALA
33
A
VAL
34
n
34
VAL
34
A
LEU
35
n
35
LEU
35
A
GLU
36
n
36
GLU
36
A
ASN
37
n
37
ASN
37
A
n
38
38
A
n
39
39
A
n
40
40
A
n
41
41
A
n
42
42
A
GLN
43
n
43
GLN
43
A
TYR
44
n
44
TYR
44
A
LEU
45
n
45
LEU
45
A
PHE
46
n
46
PHE
46
A
SER
47
n
47
SER
47
A
ALA
48
n
48
ALA
48
A
GLU
49
n
49
GLU
49
A
GLU
50
n
50
GLU
50
A
ARG
51
n
51
ARG
51
A
LEU
52
n
52
LEU
52
A
ALA
53
n
53
ALA
53
A
ILE
54
n
54
ILE
54
A
ILE
55
n
55
ILE
55
A
ARG
56
n
56
ARG
56
A
GLU
57
n
57
GLU
57
A
ALA
58
n
58
ALA
58
A
THR
59
n
59
THR
59
A
ALA
60
n
60
ALA
60
A
HIS
61
n
61
HIS
61
A
LEU
62
n
62
LEU
62
A
ALA
63
n
63
ALA
63
A
ASN
64
n
64
ASN
64
A
VAL
65
n
65
VAL
65
A
GLU
66
n
66
GLU
66
A
ALA
67
n
67
ALA
67
A
ALA
68
n
68
ALA
68
A
THR
69
n
69
THR
69
A
PHE
70
n
70
PHE
70
A
SER
71
n
71
SER
71
A
GLY
72
n
72
GLY
72
A
LEU
73
n
73
LEU
73
A
LEU
74
n
74
LEU
74
A
VAL
75
n
75
VAL
75
A
ASP
76
n
76
ASP
76
A
PHE
77
n
77
PHE
77
A
VAL
78
n
78
VAL
78
A
ARG
79
n
79
ARG
79
A
ARG
80
n
80
ARG
80
A
VAL
81
n
81
VAL
81
A
GLY
82
n
82
GLY
82
A
ALA
83
n
83
ALA
83
A
GLN
84
n
84
GLN
84
A
ALA
85
n
85
ALA
85
A
ILE
86
n
86
ILE
86
A
VAL
87
n
87
VAL
87
A
LYS
88
n
88
LYS
88
A
GLY
89
n
89
GLY
89
A
LEU
90
n
90
LEU
90
A
ARG
91
n
91
ARG
91
A
ALA
92
n
92
ALA
92
A
VAL
93
n
93
VAL
93
A
SER
94
n
94
SER
94
A
ASP
95
n
95
ASP
95
A
TYR
96
n
96
TYR
96
A
GLU
97
n
97
GLU
97
A
TYR
98
n
98
TYR
98
A
GLU
99
n
99
GLU
99
A
LEU
100
n
100
LEU
100
A
GLN
101
n
101
GLN
101
A
MET
102
n
102
MET
102
A
ALA
103
n
103
ALA
103
A
HIS
104
n
104
HIS
104
A
LEU
105
n
105
LEU
105
A
ASN
106
n
106
ASN
106
A
ARG
107
n
107
ARG
107
A
GLN
108
n
108
GLN
108
A
LEU
109
n
109
LEU
109
A
TYR
110
n
110
TYR
110
A
PRO
111
n
111
PRO
111
A
GLY
112
n
112
GLY
112
A
LEU
113
n
113
LEU
113
A
GLU
114
n
114
GLU
114
A
THR
115
n
115
THR
115
A
LEU
116
n
116
LEU
116
A
PHE
117
n
117
PHE
117
A
ILE
118
n
118
ILE
118
A
LEU
119
n
119
LEU
119
A
ALA
120
n
120
ALA
120
A
ALA
121
n
121
ALA
121
A
THR
122
n
122
THR
122
A
ARG
123
n
123
ARG
123
A
TYR
124
n
124
TYR
124
A
SER
125
n
125
SER
125
A
PHE
126
n
126
PHE
126
A
VAL
127
n
127
VAL
127
A
SER
128
n
128
SER
128
A
SER
129
n
129
SER
129
A
THR
130
n
130
THR
130
A
MET
131
n
131
MET
131
A
VAL
132
n
132
VAL
132
A
LYS
133
n
133
LYS
133
A
GLU
134
n
134
GLU
134
A
ILE
135
n
135
ILE
135
A
ALA
136
n
136
ALA
136
A
ARG
137
n
137
ARG
137
A
TYR
138
n
138
TYR
138
A
GLY
139
n
139
GLY
139
A
GLY
140
n
140
GLY
140
A
ASP
141
n
141
ASP
141
A
VAL
142
n
142
VAL
142
A
SER
143
n
143
SER
143
A
LYS
144
n
144
LYS
144
A
LEU
145
n
145
LEU
145
A
VAL
146
n
146
VAL
146
A
PRO
147
n
147
PRO
147
A
PRO
148
n
148
PRO
148
A
ALA
149
n
149
ALA
149
A
THR
150
n
150
THR
150
A
LEU
151
n
151
LEU
151
A
ARG
152
n
152
ARG
152
A
ALA
153
n
153
ALA
153
A
LEU
154
n
154
LEU
154
A
LYS
155
n
155
LYS
155
A
ALA
156
n
156
ALA
156
A
LYS
157
n
157
LYS
157
A
LEU
158
n
158
LEU
158
A
GLY
159
n
159
GLY
159
A
GLN
160
n
160
GLN
160
A
author_and_software_defined_assembly
PISA
6
hexameric
22500
-485.5
33610
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
-0.8660254038
0.0000000000
0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_655
-y+1,x-y,z
crystal symmetry operation
115.7150000000
0.0000000000
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
3_665
-x+y+1,-x+1,z
crystal symmetry operation
57.8575000000
100.2121295989
0.0000000000
-0.5000000000
-0.8660254038
0.0000000000
-0.8660254038
0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
18_654
-x+4/3,-x+y+2/3,-z-1/3
crystal symmetry operation
115.7150000000
66.8080863993
-38.5536666667
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
17_554
x-y+1/3,-y+2/3,-z-1/3
crystal symmetry operation
0.0000000000
66.8080863993
-38.5536666667
-0.5000000000
0.8660254038
0.0000000000
0.8660254038
0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
16_544
y+1/3,x-1/3,-z-1/3
crystal symmetry operation
57.8575000000
-33.4040431996
-38.5536666667
A
N
GLU
66
A
N
GLU
66
A
O
VAL
30
A
O
VAL
30
A
N
THR
31
A
N
THR
31
A
O
VAL
3
A
O
VAL
3
A
N
VAL
4
A
N
VAL
4
A
O
ALA
85
A
O
ALA
85
A
N
ILE
86
A
N
ILE
86
A
O
GLU
114
A
O
GLU
114
1
A
HOH
2034
F
HOH
1
A
CG
GLN
43
A
CG
GLN
43
1
Y
1
A
CD
GLN
43
A
CD
GLN
43
1
Y
1
A
OE1
GLN
43
A
OE1
GLN
43
1
Y
1
A
NE2
GLN
43
A
NE2
GLN
43
1
Y
1
A
PRO
38
A
PRO
38
1
Y
1
A
SER
39
A
SER
39
1
Y
1
A
LYS
40
A
LYS
40
1
Y
1
A
ARG
41
A
ARG
41
1
Y
1
A
GLY
42
A
GLY
42
1
Y
1
A
A
O
O
HOH
HOH
2126
2126
1.21
1_555
17_554
1
A
ASP
10
-118.59
74.57
1
A
ALA
92
-55.97
-8.41
1
A
SER
94
-40.92
151.88
1
A
PRO
111
-35.90
115.66
PROTEIN_REP.PARAM
PROTEIN.TOP
WATER_REP.PARAM
WATER_REP.TOP
LIGAND.PAR
LIGAND.TOP
26.2
-1.27
-0.02
0.00
-1.27
0.00
2.54
0.201
0.003
0.196
0.196
1.5
37.8
4761
47263
10.1
99.2
RANDOM
1745265.87
1
RESTRAINED
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
PDB ENTRY 1QJC
FLAT MODEL
52.1
0.37
0.19
0.18
5.00
0.22
0.22
1.5
37.8
162
1408
37
0
1209
0.005
1.1
21.7
0.72
2.74
1.50
3.93
2.00
4.65
2.00
6.65
2.50
0.309
0.011
0.319
1.59
750
6974
6
9.7
98.3
19.5
1.500
50.000
1OD6
47654
2.000
0.04000
1
23.6000
10.300
99.3
0.35900
1.50
1.55
8.000
1
9.80
98.3
refinement
CNS
1.1
data reduction
DENZO
data scaling
SCALEPACK
phasing
CNS
The Crystal Structure of Phosphopantetheine adenylyltransferase from Thermus Thermophilus in complex with 4'-phosphopantetheine
1
N
N
2
N
N
3
N
N
3
N
N
3
N
N
4
N
N
A
THR
13
A
THR
13
HELX_P
A
PHE
27
A
PHE
27
1
1
15
A
SER
47
A
SER
47
HELX_P
A
THR
59
A
THR
59
1
2
13
A
LEU
73
A
LEU
73
HELX_P
A
VAL
81
A
VAL
81
1
3
9
A
ASP
95
A
ASP
95
HELX_P
A
TYR
110
A
TYR
110
1
4
16
A
ALA
121
A
ALA
121
HELX_P
A
SER
125
A
SER
125
5
5
5
A
SER
128
A
SER
128
HELX_P
A
TYR
138
A
TYR
138
1
6
11
A
PRO
147
A
PRO
147
HELX_P
A
LEU
158
A
LEU
158
1
7
12
TRANSFERASE
COENZYME A BIOSYNTHESIS, TRANSFERASE, NUCLEOTIDYLTRANSFERASE, RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE, RSGI, STRUCTURAL GENOMICS
A
ASP
10
A
ASP
10
1
A
PRO
11
A
PRO
11
-0.06
COAD_THET8
UNP
1
Q5SJS9
1
160
1OD6
1
160
Q5SJS9
A
1
1
160
5
parallel
parallel
parallel
parallel
A
VAL
65
A
VAL
65
A
PHE
70
A
PHE
70
A
LYS
29
A
LYS
29
A
LEU
35
A
LEU
35
A
HIS
2
A
HIS
2
A
GLY
7
A
GLY
7
A
ALA
85
A
ALA
85
A
LEU
90
A
LEU
90
A
GLU
114
A
GLU
114
A
LEU
119
A
LEU
119
BINDING SITE FOR RESIDUE SO4 A 1162
A
SO4
1162
Software
7
BINDING SITE FOR RESIDUE SO4 A 1163
A
SO4
1163
Software
8
BINDING SITE FOR RESIDUE SO4 A 1164
A
SO4
1164
Software
5
BINDING SITE FOR RESIDUE PNS A 1161
A
PNS
1161
Software
17
A
HIS
104
A
HIS
104
7
18_654
A
ARG
107
A
ARG
107
7
18_654
A
GLN
108
A
GLN
108
7
18_654
A
ALA
121
A
ALA
121
7
1_555
A
THR
122
A
THR
122
7
1_555
A
HOH
2124
F
HOH
7
1_555
A
HOH
2157
F
HOH
7
1_555
A
HIS
16
A
HIS
16
8
1_555
A
ARG
91
A
ARG
91
8
1_555
A
SER
128
A
SER
128
8
1_555
A
SER
129
A
SER
129
8
1_555
A
HOH
2021
F
HOH
8
1_555
A
HOH
2158
F
HOH
8
1_555
A
HOH
2159
F
HOH
8
1_555
A
HOH
2160
F
HOH
8
1_555
A
GLN
84
A
GLN
84
5
1_555
A
TYR
110
A
TYR
110
5
1_555
A
HOH
2115
F
HOH
5
1_555
A
HOH
2161
F
HOH
5
1_555
A
HOH
2162
F
HOH
5
1_555
A
PRO
6
A
PRO
6
17
1_555
A
GLY
7
A
GLY
7
17
1_555
A
SER
8
A
SER
8
17
1_555
A
LEU
35
A
LEU
35
17
1_555
A
GLY
72
A
GLY
72
17
1_555
A
LEU
73
A
LEU
73
17
1_555
A
LEU
74
A
LEU
74
17
1_555
A
ASN
106
A
ASN
106
17
1_555
A
MET
131
A
MET
131
17
3_665
A
GLU
134
A
GLU
134
17
3_665
A
HOH
2133
F
HOH
17
3_665
A
HOH
2151
F
HOH
17
1_555
A
HOH
2152
F
HOH
17
1_555
A
HOH
2153
F
HOH
17
1_555
A
HOH
2154
F
HOH
17
1_555
A
HOH
2155
F
HOH
17
1_555
A
HOH
2156
F
HOH
17
1_555
155
H 3 2