0.005584
0.003224
0.000000
0.000000
0.006448
0.000000
0.000000
0.000000
0.005724
0.00000
0.00000
0.00000
Sulzenbacher, G.
Bignon, C.
Bourne, Y.
Henrissat, B.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
36
90.00
90.00
120.00
179.080
179.080
174.692
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C6 H12 O5
164.156
beta-L-fucopyranose
beta-L-fucose; 6-deoxy-beta-L-galactopyranose; L-fucose; fucose; 6-DEOXY-BETA-L-GALACTOSE
L-saccharide, beta linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
S
C
N
89
S
C
N
90
N
O
N
91
R
C
N
92
N
O
N
93
S
C
N
94
N
O
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
O
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
N
N
112
S
C
N
113
N
C
N
114
N
O
N
115
N
C
N
116
N
C
N
117
N
C
N
118
N
O
N
119
N
N
N
120
N
O
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
N
N
132
S
C
N
133
N
C
N
134
N
O
N
135
N
C
N
136
N
C
N
137
N
C
N
138
N
O
N
139
N
O
N
140
N
O
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
N
N
151
N
C
N
152
N
C
N
153
N
O
N
154
N
O
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
N
N
161
S
C
N
162
N
C
N
163
N
O
N
164
N
C
Y
165
N
C
Y
166
N
N
Y
167
N
C
Y
168
N
C
Y
169
N
N
N
170
N
O
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
N
N
182
S
C
N
183
N
C
N
184
N
O
N
185
S
C
N
186
N
C
N
187
N
C
N
188
N
C
N
189
N
O
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
N
N
204
S
C
N
205
N
C
N
206
N
O
N
207
N
C
N
208
N
C
N
209
N
C
N
210
N
C
N
211
N
O
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
N
N
226
S
C
N
227
N
C
N
228
N
O
N
229
N
C
N
230
N
C
N
231
N
C
N
232
N
C
N
233
N
N
N
234
N
O
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
N
255
N
C
N
256
N
S
N
257
N
C
N
258
N
O
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
N
N
271
S
C
N
272
N
C
N
273
N
O
N
274
N
C
Y
275
N
C
Y
276
N
C
Y
277
N
C
Y
278
N
C
Y
279
N
C
Y
280
N
C
N
281
N
O
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
N
N
294
S
C
N
295
N
C
N
296
N
O
N
297
N
C
N
298
N
C
N
299
N
C
N
300
N
O
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
N
N
311
S
C
N
312
N
C
N
313
N
O
N
314
N
C
N
315
N
O
N
316
N
O
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
N
N
325
S
C
N
326
N
C
N
327
N
O
N
328
R
C
N
329
N
O
N
330
N
C
N
331
N
O
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
N
N
342
S
C
N
343
N
C
N
344
N
O
N
345
N
C
Y
346
N
C
Y
347
N
C
Y
348
N
C
Y
349
N
N
Y
350
N
C
Y
351
N
C
Y
352
N
C
Y
353
N
C
Y
354
N
C
N
355
N
O
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
N
N
369
S
C
N
370
N
C
N
371
N
O
N
372
N
C
Y
373
N
C
Y
374
N
C
Y
375
N
C
Y
376
N
C
Y
377
N
C
Y
378
N
C
N
379
N
O
N
380
N
O
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
N
N
393
S
C
N
394
N
C
N
395
N
O
N
396
N
C
N
397
N
C
N
398
N
C
N
399
N
O
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
doub
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
doub
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
doub
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
doub
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
doub
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
Y
163
N
sing
Y
164
N
doub
Y
165
N
doub
N
166
N
sing
Y
167
N
sing
N
168
N
sing
Y
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
doub
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
doub
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
doub
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
Y
269
N
doub
Y
270
N
sing
Y
271
N
sing
N
272
N
sing
Y
273
N
doub
N
274
N
sing
Y
275
N
doub
N
276
N
sing
Y
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
doub
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
doub
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
doub
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
doub
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
Y
338
N
doub
Y
339
N
sing
Y
340
N
sing
N
341
N
sing
Y
342
N
doub
Y
343
N
sing
Y
344
N
sing
N
345
N
sing
Y
346
N
sing
Y
347
N
doub
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
doub
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
Y
366
N
doub
Y
367
N
sing
Y
368
N
sing
N
369
N
sing
Y
370
N
doub
N
371
N
sing
Y
372
N
doub
N
373
N
sing
Y
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
doub
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
279
13119
10.1074/JBC.M313783200
14715651
Crystal Structure of Thermotoga Maritima {Alpha}-L-Fucosidase: Insights Into the Catalytic Mechanism and the Molecular Basis for Fucosidosis
2004
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
278
47394
10.1074/JBC.M306610200
12975375
Identification of the Catalytic Nucleophile of the Family 29 Alpha -L-Fucosidase from Thermotoga Maritima Through Trapping of a Covalent Glycosyl-Enzyme Intermediate and Mutagenesis
2003
10.2210/pdb1odu/pdb
pdb_00001odu
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.0
1
CCD
2001-09-16
ADSC CCD
SINGLE WAVELENGTH
M
x-ray
1
0.9330
1.0
ID14-2
ESRF
0.9330
SYNCHROTRON
ESRF BEAMLINE ID14-2
ORF TM0306
52272.051
PUTATIVE ALPHA-L-FUCOSIDASE
3.2.1.51
2
man
polymer
164.156
beta-L-fucopyranose
2
man
non-polymer
no
no
MISMKPRYKPDWESLREHTVPKWFDKAKFGIFIHWGIYSVPGWATPTGELGKVPMDAWFFQNPYAEWYENSLRIKESPTW
EYHVKTYGENFEYEKFADLFTAEKWDPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYTDFNSVKRGPKRDLVGDLAKA
VREAGLRFGVYYSGGLDWRFTTEPIRYPEDLSYIRPNTYEYADYAYKQVMELVDLYLPDVLWNDMGWPEKGKEDLKYLFA
YYYNKHPEGSVNDRWGVPHWDFKTAEYHVNYPGDLPGYKWEFTRGIGLSFGYNRNEGPEHMLSVEQLVYTLVDVVSKGGN
LLLNVGPKGDGTIPDLQKERLLGLGEWLRKYGDAIYGTSVWERCCAKTEDGTEIRFTRKCNRIFVIFLGIPTGEKIVIED
LNLSAGTVRHFLTGERLSFKNVGKNLEITVPKKLLETDSITLVLEAVEE
MISMKPRYKPDWESLREHTVPKWFDKAKFGIFIHWGIYSVPGWATPTGELGKVPMDAWFFQNPYAEWYENSLRIKESPTW
EYHVKTYGENFEYEKFADLFTAEKWDPQEWADLFKKAGAKYVIPTTKHHDGFCLWGTKYTDFNSVKRGPKRDLVGDLAKA
VREAGLRFGVYYSGGLDWRFTTEPIRYPEDLSYIRPNTYEYADYAYKQVMELVDLYLPDVLWNDMGWPEKGKEDLKYLFA
YYYNKHPEGSVNDRWGVPHWDFKTAEYHVNYPGDLPGYKWEFTRGIGLSFGYNRNEGPEHMLSVEQLVYTLVDVVSKGGN
LLLNVGPKGDGTIPDLQKERLLGLGEWLRKYGDAIYGTSVWERCCAKTEDGTEIRFTRKCNRIFVIFLGIPTGEKIVIED
LNLSAGTVRHFLTGERLSFKNVGKNLEITVPKKLLETDSITLVLEAVEE
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
MSB8
sample
243274
THERMOTOGA MARITIMA
511693
ESCHERICHIA COLI
BL21
PDEST17
1
2.74
54.8
8.00
18% PEG600, 5% JEFFAMINE M-600, 100 MM TRIS-HCL PH 8.0, PROTEIN CONCENTRATION 5 MG/ML FUCOSE WAS INTRODUCED BY SHORT SOAKING OF A NATIVE
chem_comp
entity
pdbx_chem_comp_identifier
pdbx_database_status
pdbx_entity_nonpoly
struct_site
struct_site_gen
chem_comp
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Carbohydrate remediation
repository
Remediation
Advisory
Version format compliance
Data collection
Derived calculations
Other
Structure summary
Data collection
Database references
Refinement description
Structure summary
1
0
2004-01-15
1
1
2011-07-13
1
2
2020-07-29
1
3
2023-12-13
_chem_comp.name
_chem_comp.type
_entity.pdbx_description
_pdbx_database_status.status_code_sf
_pdbx_entity_nonpoly.name
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
LFucpb
b-L-fucopyranose
b-L-Fucp
Fuc
CRYSTAL STRUCTURE OF THERMOTOGA MARITIMA ALPHA -FUCOSIDASE
CRYSTAL STRUCTURE OF THERMOTOGA MARITIMA ALPHA -FUCOSIDASE IN COMPLEX WITH A MECHANISM BASED INHIBITOR
HELIX
DETERMINATION METHOD: AUTHOR PROVIDED.
SHEET
DETERMINATION METHOD: AUTHOR PROVIDED.
PDBE
Y
PDBE
2003-03-14
REL
REL
FUL
beta-L-fucopyranose
ALPHA-L-FUCOSIDASE BELONGS TO GLYCOSYL HYDROLASASE
FAMILY 29. THE ENZYME PERFORMS CATALYSIS WITH RETENTION OF
CONFIGURATION AT THE ANOMERIC CARBON. THE COORDINATES GIVEN
DEFINE THE STRUCTURE OF ALPHA-L- FUCOSIDASE IN COMPLEX WITH
FUCOSE. FUCOSE HAS UNDERGONE MUTAROTATION AND IS PRESENT AS
THE BETA-CONFORMER.
1HL8
NATIVE ALPHA-L-FUCOSIDASE, PDB ENTRY 1HL8
PDB
experimental model
FUL
1448
2
FUL
FUL
1448
A
FUL
1448
2
FUL
FUL
1448
B
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
n
5
5
A
n
6
6
A
ARG
7
n
7
ARG
7
A
TYR
8
n
8
TYR
8
A
LYS
9
n
9
LYS
9
A
PRO
10
n
10
PRO
10
A
ASP
11
n
11
ASP
11
A
TRP
12
n
12
TRP
12
A
GLU
13
n
13
GLU
13
A
SER
14
n
14
SER
14
A
LEU
15
n
15
LEU
15
A
ARG
16
n
16
ARG
16
A
GLU
17
n
17
GLU
17
A
HIS
18
n
18
HIS
18
A
THR
19
n
19
THR
19
A
VAL
20
n
20
VAL
20
A
PRO
21
n
21
PRO
21
A
LYS
22
n
22
LYS
22
A
TRP
23
n
23
TRP
23
A
PHE
24
n
24
PHE
24
A
ASP
25
n
25
ASP
25
A
LYS
26
n
26
LYS
26
A
ALA
27
n
27
ALA
27
A
LYS
28
n
28
LYS
28
A
PHE
29
n
29
PHE
29
A
GLY
30
n
30
GLY
30
A
ILE
31
n
31
ILE
31
A
PHE
32
n
32
PHE
32
A
ILE
33
n
33
ILE
33
A
HIS
34
n
34
HIS
34
A
TRP
35
n
35
TRP
35
A
GLY
36
n
36
GLY
36
A
ILE
37
n
37
ILE
37
A
TYR
38
n
38
TYR
38
A
SER
39
n
39
SER
39
A
VAL
40
n
40
VAL
40
A
PRO
41
n
41
PRO
41
A
GLY
42
n
42
GLY
42
A
TRP
43
n
43
TRP
43
A
ALA
44
n
44
ALA
44
A
THR
45
n
45
THR
45
A
PRO
46
n
46
PRO
46
A
n
47
47
A
n
48
48
A
n
49
49
A
n
50
50
A
n
51
51
A
n
52
52
A
n
53
53
A
n
54
54
A
n
55
55
A
ASP
56
n
56
ASP
56
A
ALA
57
n
57
ALA
57
A
TRP
58
n
58
TRP
58
A
PHE
59
n
59
PHE
59
A
PHE
60
n
60
PHE
60
A
GLN
61
n
61
GLN
61
A
ASN
62
n
62
ASN
62
A
PRO
63
n
63
PRO
63
A
TYR
64
n
64
TYR
64
A
ALA
65
n
65
ALA
65
A
GLU
66
n
66
GLU
66
A
TRP
67
n
67
TRP
67
A
TYR
68
n
68
TYR
68
A
GLU
69
n
69
GLU
69
A
ASN
70
n
70
ASN
70
A
SER
71
n
71
SER
71
A
LEU
72
n
72
LEU
72
A
ARG
73
n
73
ARG
73
A
ILE
74
n
74
ILE
74
A
LYS
75
n
75
LYS
75
A
GLU
76
n
76
GLU
76
A
SER
77
n
77
SER
77
A
PRO
78
n
78
PRO
78
A
THR
79
n
79
THR
79
A
TRP
80
n
80
TRP
80
A
GLU
81
n
81
GLU
81
A
TYR
82
n
82
TYR
82
A
HIS
83
n
83
HIS
83
A
VAL
84
n
84
VAL
84
A
LYS
85
n
85
LYS
85
A
THR
86
n
86
THR
86
A
TYR
87
n
87
TYR
87
A
GLY
88
n
88
GLY
88
A
GLU
89
n
89
GLU
89
A
ASN
90
n
90
ASN
90
A
PHE
91
n
91
PHE
91
A
GLU
92
n
92
GLU
92
A
TYR
93
n
93
TYR
93
A
GLU
94
n
94
GLU
94
A
LYS
95
n
95
LYS
95
A
PHE
96
n
96
PHE
96
A
ALA
97
n
97
ALA
97
A
ASP
98
n
98
ASP
98
A
LEU
99
n
99
LEU
99
A
PHE
100
n
100
PHE
100
A
THR
101
n
101
THR
101
A
ALA
102
n
102
ALA
102
A
GLU
103
n
103
GLU
103
A
LYS
104
n
104
LYS
104
A
TRP
105
n
105
TRP
105
A
ASP
106
n
106
ASP
106
A
PRO
107
n
107
PRO
107
A
GLN
108
n
108
GLN
108
A
GLU
109
n
109
GLU
109
A
TRP
110
n
110
TRP
110
A
ALA
111
n
111
ALA
111
A
ASP
112
n
112
ASP
112
A
LEU
113
n
113
LEU
113
A
PHE
114
n
114
PHE
114
A
LYS
115
n
115
LYS
115
A
LYS
116
n
116
LYS
116
A
ALA
117
n
117
ALA
117
A
GLY
118
n
118
GLY
118
A
ALA
119
n
119
ALA
119
A
LYS
120
n
120
LYS
120
A
TYR
121
n
121
TYR
121
A
VAL
122
n
122
VAL
122
A
ILE
123
n
123
ILE
123
A
PRO
124
n
124
PRO
124
A
THR
125
n
125
THR
125
A
THR
126
n
126
THR
126
A
LYS
127
n
127
LYS
127
A
HIS
128
n
128
HIS
128
A
HIS
129
n
129
HIS
129
A
ASP
130
n
130
ASP
130
A
GLY
131
n
131
GLY
131
A
PHE
132
n
132
PHE
132
A
CYS
133
n
133
CYS
133
A
LEU
134
n
134
LEU
134
A
TRP
135
n
135
TRP
135
A
GLY
136
n
136
GLY
136
A
THR
137
n
137
THR
137
A
LYS
138
n
138
LYS
138
A
TYR
139
n
139
TYR
139
A
THR
140
n
140
THR
140
A
ASP
141
n
141
ASP
141
A
PHE
142
n
142
PHE
142
A
ASN
143
n
143
ASN
143
A
SER
144
n
144
SER
144
A
VAL
145
n
145
VAL
145
A
LYS
146
n
146
LYS
146
A
ARG
147
n
147
ARG
147
A
GLY
148
n
148
GLY
148
A
PRO
149
n
149
PRO
149
A
LYS
150
n
150
LYS
150
A
ARG
151
n
151
ARG
151
A
ASP
152
n
152
ASP
152
A
LEU
153
n
153
LEU
153
A
VAL
154
n
154
VAL
154
A
GLY
155
n
155
GLY
155
A
ASP
156
n
156
ASP
156
A
LEU
157
n
157
LEU
157
A
ALA
158
n
158
ALA
158
A
LYS
159
n
159
LYS
159
A
ALA
160
n
160
ALA
160
A
VAL
161
n
161
VAL
161
A
ARG
162
n
162
ARG
162
A
GLU
163
n
163
GLU
163
A
ALA
164
n
164
ALA
164
A
GLY
165
n
165
GLY
165
A
LEU
166
n
166
LEU
166
A
ARG
167
n
167
ARG
167
A
PHE
168
n
168
PHE
168
A
GLY
169
n
169
GLY
169
A
VAL
170
n
170
VAL
170
A
TYR
171
n
171
TYR
171
A
TYR
172
n
172
TYR
172
A
SER
173
n
173
SER
173
A
GLY
174
n
174
GLY
174
A
GLY
175
n
175
GLY
175
A
LEU
176
n
176
LEU
176
A
ASP
177
n
177
ASP
177
A
TRP
178
n
178
TRP
178
A
ARG
179
n
179
ARG
179
A
PHE
180
n
180
PHE
180
A
THR
181
n
181
THR
181
A
THR
182
n
182
THR
182
A
GLU
183
n
183
GLU
183
A
PRO
184
n
184
PRO
184
A
ILE
185
n
185
ILE
185
A
ARG
186
n
186
ARG
186
A
TYR
187
n
187
TYR
187
A
PRO
188
n
188
PRO
188
A
GLU
189
n
189
GLU
189
A
ASP
190
n
190
ASP
190
A
LEU
191
n
191
LEU
191
A
SER
192
n
192
SER
192
A
TYR
193
n
193
TYR
193
A
ILE
194
n
194
ILE
194
A
ARG
195
n
195
ARG
195
A
PRO
196
n
196
PRO
196
A
ASN
197
n
197
ASN
197
A
THR
198
n
198
THR
198
A
TYR
199
n
199
TYR
199
A
GLU
200
n
200
GLU
200
A
TYR
201
n
201
TYR
201
A
ALA
202
n
202
ALA
202
A
ASP
203
n
203
ASP
203
A
TYR
204
n
204
TYR
204
A
ALA
205
n
205
ALA
205
A
TYR
206
n
206
TYR
206
A
LYS
207
n
207
LYS
207
A
GLN
208
n
208
GLN
208
A
VAL
209
n
209
VAL
209
A
MET
210
n
210
MET
210
A
GLU
211
n
211
GLU
211
A
LEU
212
n
212
LEU
212
A
VAL
213
n
213
VAL
213
A
ASP
214
n
214
ASP
214
A
LEU
215
n
215
LEU
215
A
TYR
216
n
216
TYR
216
A
LEU
217
n
217
LEU
217
A
PRO
218
n
218
PRO
218
A
ASP
219
n
219
ASP
219
A
VAL
220
n
220
VAL
220
A
LEU
221
n
221
LEU
221
A
TRP
222
n
222
TRP
222
A
ASN
223
n
223
ASN
223
A
ASP
224
n
224
ASP
224
A
MET
225
n
225
MET
225
A
GLY
226
n
226
GLY
226
A
TRP
227
n
227
TRP
227
A
PRO
228
n
228
PRO
228
A
GLU
229
n
229
GLU
229
A
LYS
230
n
230
LYS
230
A
GLY
231
n
231
GLY
231
A
LYS
232
n
232
LYS
232
A
GLU
233
n
233
GLU
233
A
ASP
234
n
234
ASP
234
A
LEU
235
n
235
LEU
235
A
LYS
236
n
236
LYS
236
A
TYR
237
n
237
TYR
237
A
LEU
238
n
238
LEU
238
A
PHE
239
n
239
PHE
239
A
ALA
240
n
240
ALA
240
A
TYR
241
n
241
TYR
241
A
TYR
242
n
242
TYR
242
A
TYR
243
n
243
TYR
243
A
ASN
244
n
244
ASN
244
A
LYS
245
n
245
LYS
245
A
HIS
246
n
246
HIS
246
A
PRO
247
n
247
PRO
247
A
GLU
248
n
248
GLU
248
A
GLY
249
n
249
GLY
249
A
SER
250
n
250
SER
250
A
VAL
251
n
251
VAL
251
A
ASN
252
n
252
ASN
252
A
ASP
253
n
253
ASP
253
A
ARG
254
n
254
ARG
254
A
TRP
255
n
255
TRP
255
A
GLY
256
n
256
GLY
256
A
VAL
257
n
257
VAL
257
A
PRO
258
n
258
PRO
258
A
HIS
259
n
259
HIS
259
A
TRP
260
n
260
TRP
260
A
ASP
261
n
261
ASP
261
A
PHE
262
n
262
PHE
262
A
LYS
263
n
263
LYS
263
A
THR
264
n
264
THR
264
A
ALA
265
n
265
ALA
265
A
GLU
266
n
266
GLU
266
A
n
267
267
A
n
268
268
A
n
269
269
A
n
270
270
A
n
271
271
A
n
272
272
A
n
273
273
A
ASP
274
n
274
ASP
274
A
LEU
275
n
275
LEU
275
A
PRO
276
n
276
PRO
276
A
GLY
277
n
277
GLY
277
A
TYR
278
n
278
TYR
278
A
LYS
279
n
279
LYS
279
A
TRP
280
n
280
TRP
280
A
GLU
281
n
281
GLU
281
A
PHE
282
n
282
PHE
282
A
THR
283
n
283
THR
283
A
ARG
284
n
284
ARG
284
A
GLY
285
n
285
GLY
285
A
ILE
286
n
286
ILE
286
A
GLY
287
n
287
GLY
287
A
LEU
288
n
288
LEU
288
A
SER
289
n
289
SER
289
A
PHE
290
n
290
PHE
290
A
GLY
291
n
291
GLY
291
A
TYR
292
n
292
TYR
292
A
ASN
293
n
293
ASN
293
A
ARG
294
n
294
ARG
294
A
ASN
295
n
295
ASN
295
A
GLU
296
n
296
GLU
296
A
n
297
297
A
n
298
298
A
n
299
299
A
HIS
300
n
300
HIS
300
A
MET
301
n
301
MET
301
A
LEU
302
n
302
LEU
302
A
SER
303
n
303
SER
303
A
VAL
304
n
304
VAL
304
A
GLU
305
n
305
GLU
305
A
GLN
306
n
306
GLN
306
A
LEU
307
n
307
LEU
307
A
VAL
308
n
308
VAL
308
A
TYR
309
n
309
TYR
309
A
THR
310
n
310
THR
310
A
LEU
311
n
311
LEU
311
A
VAL
312
n
312
VAL
312
A
ASP
313
n
313
ASP
313
A
VAL
314
n
314
VAL
314
A
VAL
315
n
315
VAL
315
A
SER
316
n
316
SER
316
A
LYS
317
n
317
LYS
317
A
GLY
318
n
318
GLY
318
A
GLY
319
n
319
GLY
319
A
ASN
320
n
320
ASN
320
A
LEU
321
n
321
LEU
321
A
LEU
322
n
322
LEU
322
A
LEU
323
n
323
LEU
323
A
ASN
324
n
324
ASN
324
A
VAL
325
n
325
VAL
325
A
GLY
326
n
326
GLY
326
A
PRO
327
n
327
PRO
327
A
LYS
328
n
328
LYS
328
A
GLY
329
n
329
GLY
329
A
ASP
330
n
330
ASP
330
A
GLY
331
n
331
GLY
331
A
THR
332
n
332
THR
332
A
ILE
333
n
333
ILE
333
A
PRO
334
n
334
PRO
334
A
ASP
335
n
335
ASP
335
A
LEU
336
n
336
LEU
336
A
GLN
337
n
337
GLN
337
A
LYS
338
n
338
LYS
338
A
GLU
339
n
339
GLU
339
A
ARG
340
n
340
ARG
340
A
LEU
341
n
341
LEU
341
A
LEU
342
n
342
LEU
342
A
GLY
343
n
343
GLY
343
A
LEU
344
n
344
LEU
344
A
GLY
345
n
345
GLY
345
A
GLU
346
n
346
GLU
346
A
TRP
347
n
347
TRP
347
A
LEU
348
n
348
LEU
348
A
ARG
349
n
349
ARG
349
A
LYS
350
n
350
LYS
350
A
TYR
351
n
351
TYR
351
A
GLY
352
n
352
GLY
352
A
ASP
353
n
353
ASP
353
A
ALA
354
n
354
ALA
354
A
ILE
355
n
355
ILE
355
A
TYR
356
n
356
TYR
356
A
GLY
357
n
357
GLY
357
A
THR
358
n
358
THR
358
A
SER
359
n
359
SER
359
A
VAL
360
n
360
VAL
360
A
TRP
361
n
361
TRP
361
A
GLU
362
n
362
GLU
362
A
ARG
363
n
363
ARG
363
A
CYS
364
n
364
CYS
364
A
CYS
365
n
365
CYS
365
A
ALA
366
n
366
ALA
366
A
LYS
367
n
367
LYS
367
A
THR
368
n
368
THR
368
A
GLU
369
n
369
GLU
369
A
ASP
370
n
370
ASP
370
A
GLY
371
n
371
GLY
371
A
THR
372
n
372
THR
372
A
GLU
373
n
373
GLU
373
A
ILE
374
n
374
ILE
374
A
ARG
375
n
375
ARG
375
A
PHE
376
n
376
PHE
376
A
THR
377
n
377
THR
377
A
ARG
378
n
378
ARG
378
A
LYS
379
n
379
LYS
379
A
CYS
380
n
380
CYS
380
A
ASN
381
n
381
ASN
381
A
ARG
382
n
382
ARG
382
A
ILE
383
n
383
ILE
383
A
PHE
384
n
384
PHE
384
A
VAL
385
n
385
VAL
385
A
ILE
386
n
386
ILE
386
A
PHE
387
n
387
PHE
387
A
LEU
388
n
388
LEU
388
A
GLY
389
n
389
GLY
389
A
ILE
390
n
390
ILE
390
A
PRO
391
n
391
PRO
391
A
THR
392
n
392
THR
392
A
GLY
393
n
393
GLY
393
A
GLU
394
n
394
GLU
394
A
LYS
395
n
395
LYS
395
A
ILE
396
n
396
ILE
396
A
VAL
397
n
397
VAL
397
A
ILE
398
n
398
ILE
398
A
GLU
399
n
399
GLU
399
A
ASP
400
n
400
ASP
400
A
LEU
401
n
401
LEU
401
A
ASN
402
n
402
ASN
402
A
LEU
403
n
403
LEU
403
A
SER
404
n
404
SER
404
A
ALA
405
n
405
ALA
405
A
GLY
406
n
406
GLY
406
A
THR
407
n
407
THR
407
A
VAL
408
n
408
VAL
408
A
ARG
409
n
409
ARG
409
A
HIS
410
n
410
HIS
410
A
PHE
411
n
411
PHE
411
A
LEU
412
n
412
LEU
412
A
THR
413
n
413
THR
413
A
GLY
414
n
414
GLY
414
A
GLU
415
n
415
GLU
415
A
ARG
416
n
416
ARG
416
A
LEU
417
n
417
LEU
417
A
SER
418
n
418
SER
418
A
PHE
419
n
419
PHE
419
A
LYS
420
n
420
LYS
420
A
ASN
421
n
421
ASN
421
A
VAL
422
n
422
VAL
422
A
GLY
423
n
423
GLY
423
A
LYS
424
n
424
LYS
424
A
ASN
425
n
425
ASN
425
A
LEU
426
n
426
LEU
426
A
GLU
427
n
427
GLU
427
A
ILE
428
n
428
ILE
428
A
THR
429
n
429
THR
429
A
VAL
430
n
430
VAL
430
A
PRO
431
n
431
PRO
431
A
LYS
432
n
432
LYS
432
A
LYS
433
n
433
LYS
433
A
LEU
434
n
434
LEU
434
A
LEU
435
n
435
LEU
435
A
GLU
436
n
436
GLU
436
A
THR
437
n
437
THR
437
A
ASP
438
n
438
ASP
438
A
SER
439
n
439
SER
439
A
ILE
440
n
440
ILE
440
A
THR
441
n
441
THR
441
A
LEU
442
n
442
LEU
442
A
VAL
443
n
443
VAL
443
A
LEU
444
n
444
LEU
444
A
GLU
445
n
445
GLU
445
A
ALA
446
n
446
ALA
446
A
VAL
447
n
447
VAL
447
A
n
448
448
A
n
449
449
A
n
1
1
B
n
2
2
B
n
3
3
B
n
4
4
B
n
5
5
B
n
6
6
B
ARG
7
n
7
ARG
7
B
TYR
8
n
8
TYR
8
B
LYS
9
n
9
LYS
9
B
PRO
10
n
10
PRO
10
B
ASP
11
n
11
ASP
11
B
TRP
12
n
12
TRP
12
B
GLU
13
n
13
GLU
13
B
SER
14
n
14
SER
14
B
LEU
15
n
15
LEU
15
B
ARG
16
n
16
ARG
16
B
GLU
17
n
17
GLU
17
B
HIS
18
n
18
HIS
18
B
THR
19
n
19
THR
19
B
VAL
20
n
20
VAL
20
B
PRO
21
n
21
PRO
21
B
LYS
22
n
22
LYS
22
B
TRP
23
n
23
TRP
23
B
PHE
24
n
24
PHE
24
B
ASP
25
n
25
ASP
25
B
LYS
26
n
26
LYS
26
B
ALA
27
n
27
ALA
27
B
LYS
28
n
28
LYS
28
B
PHE
29
n
29
PHE
29
B
GLY
30
n
30
GLY
30
B
ILE
31
n
31
ILE
31
B
PHE
32
n
32
PHE
32
B
ILE
33
n
33
ILE
33
B
HIS
34
n
34
HIS
34
B
TRP
35
n
35
TRP
35
B
GLY
36
n
36
GLY
36
B
ILE
37
n
37
ILE
37
B
TYR
38
n
38
TYR
38
B
SER
39
n
39
SER
39
B
VAL
40
n
40
VAL
40
B
PRO
41
n
41
PRO
41
B
GLY
42
n
42
GLY
42
B
TRP
43
n
43
TRP
43
B
ALA
44
n
44
ALA
44
B
THR
45
n
45
THR
45
B
PRO
46
n
46
PRO
46
B
n
47
47
B
n
48
48
B
n
49
49
B
n
50
50
B
n
51
51
B
n
52
52
B
n
53
53
B
n
54
54
B
n
55
55
B
ASP
56
n
56
ASP
56
B
ALA
57
n
57
ALA
57
B
TRP
58
n
58
TRP
58
B
PHE
59
n
59
PHE
59
B
PHE
60
n
60
PHE
60
B
GLN
61
n
61
GLN
61
B
ASN
62
n
62
ASN
62
B
PRO
63
n
63
PRO
63
B
TYR
64
n
64
TYR
64
B
ALA
65
n
65
ALA
65
B
GLU
66
n
66
GLU
66
B
TRP
67
n
67
TRP
67
B
TYR
68
n
68
TYR
68
B
GLU
69
n
69
GLU
69
B
ASN
70
n
70
ASN
70
B
SER
71
n
71
SER
71
B
LEU
72
n
72
LEU
72
B
ARG
73
n
73
ARG
73
B
ILE
74
n
74
ILE
74
B
LYS
75
n
75
LYS
75
B
GLU
76
n
76
GLU
76
B
SER
77
n
77
SER
77
B
PRO
78
n
78
PRO
78
B
THR
79
n
79
THR
79
B
TRP
80
n
80
TRP
80
B
GLU
81
n
81
GLU
81
B
TYR
82
n
82
TYR
82
B
HIS
83
n
83
HIS
83
B
VAL
84
n
84
VAL
84
B
LYS
85
n
85
LYS
85
B
THR
86
n
86
THR
86
B
TYR
87
n
87
TYR
87
B
GLY
88
n
88
GLY
88
B
GLU
89
n
89
GLU
89
B
ASN
90
n
90
ASN
90
B
PHE
91
n
91
PHE
91
B
GLU
92
n
92
GLU
92
B
TYR
93
n
93
TYR
93
B
GLU
94
n
94
GLU
94
B
LYS
95
n
95
LYS
95
B
PHE
96
n
96
PHE
96
B
ALA
97
n
97
ALA
97
B
ASP
98
n
98
ASP
98
B
LEU
99
n
99
LEU
99
B
PHE
100
n
100
PHE
100
B
THR
101
n
101
THR
101
B
ALA
102
n
102
ALA
102
B
GLU
103
n
103
GLU
103
B
LYS
104
n
104
LYS
104
B
TRP
105
n
105
TRP
105
B
ASP
106
n
106
ASP
106
B
PRO
107
n
107
PRO
107
B
GLN
108
n
108
GLN
108
B
GLU
109
n
109
GLU
109
B
TRP
110
n
110
TRP
110
B
ALA
111
n
111
ALA
111
B
ASP
112
n
112
ASP
112
B
LEU
113
n
113
LEU
113
B
PHE
114
n
114
PHE
114
B
LYS
115
n
115
LYS
115
B
LYS
116
n
116
LYS
116
B
ALA
117
n
117
ALA
117
B
GLY
118
n
118
GLY
118
B
ALA
119
n
119
ALA
119
B
LYS
120
n
120
LYS
120
B
TYR
121
n
121
TYR
121
B
VAL
122
n
122
VAL
122
B
ILE
123
n
123
ILE
123
B
PRO
124
n
124
PRO
124
B
THR
125
n
125
THR
125
B
THR
126
n
126
THR
126
B
LYS
127
n
127
LYS
127
B
HIS
128
n
128
HIS
128
B
HIS
129
n
129
HIS
129
B
ASP
130
n
130
ASP
130
B
GLY
131
n
131
GLY
131
B
PHE
132
n
132
PHE
132
B
CYS
133
n
133
CYS
133
B
LEU
134
n
134
LEU
134
B
TRP
135
n
135
TRP
135
B
GLY
136
n
136
GLY
136
B
THR
137
n
137
THR
137
B
LYS
138
n
138
LYS
138
B
TYR
139
n
139
TYR
139
B
THR
140
n
140
THR
140
B
ASP
141
n
141
ASP
141
B
PHE
142
n
142
PHE
142
B
ASN
143
n
143
ASN
143
B
SER
144
n
144
SER
144
B
VAL
145
n
145
VAL
145
B
LYS
146
n
146
LYS
146
B
ARG
147
n
147
ARG
147
B
GLY
148
n
148
GLY
148
B
PRO
149
n
149
PRO
149
B
LYS
150
n
150
LYS
150
B
ARG
151
n
151
ARG
151
B
ASP
152
n
152
ASP
152
B
LEU
153
n
153
LEU
153
B
VAL
154
n
154
VAL
154
B
GLY
155
n
155
GLY
155
B
ASP
156
n
156
ASP
156
B
LEU
157
n
157
LEU
157
B
ALA
158
n
158
ALA
158
B
LYS
159
n
159
LYS
159
B
ALA
160
n
160
ALA
160
B
VAL
161
n
161
VAL
161
B
ARG
162
n
162
ARG
162
B
GLU
163
n
163
GLU
163
B
ALA
164
n
164
ALA
164
B
GLY
165
n
165
GLY
165
B
LEU
166
n
166
LEU
166
B
ARG
167
n
167
ARG
167
B
PHE
168
n
168
PHE
168
B
GLY
169
n
169
GLY
169
B
VAL
170
n
170
VAL
170
B
TYR
171
n
171
TYR
171
B
TYR
172
n
172
TYR
172
B
SER
173
n
173
SER
173
B
GLY
174
n
174
GLY
174
B
GLY
175
n
175
GLY
175
B
LEU
176
n
176
LEU
176
B
ASP
177
n
177
ASP
177
B
TRP
178
n
178
TRP
178
B
ARG
179
n
179
ARG
179
B
PHE
180
n
180
PHE
180
B
THR
181
n
181
THR
181
B
THR
182
n
182
THR
182
B
GLU
183
n
183
GLU
183
B
PRO
184
n
184
PRO
184
B
ILE
185
n
185
ILE
185
B
ARG
186
n
186
ARG
186
B
TYR
187
n
187
TYR
187
B
PRO
188
n
188
PRO
188
B
GLU
189
n
189
GLU
189
B
ASP
190
n
190
ASP
190
B
LEU
191
n
191
LEU
191
B
SER
192
n
192
SER
192
B
TYR
193
n
193
TYR
193
B
ILE
194
n
194
ILE
194
B
ARG
195
n
195
ARG
195
B
PRO
196
n
196
PRO
196
B
ASN
197
n
197
ASN
197
B
THR
198
n
198
THR
198
B
TYR
199
n
199
TYR
199
B
GLU
200
n
200
GLU
200
B
TYR
201
n
201
TYR
201
B
ALA
202
n
202
ALA
202
B
ASP
203
n
203
ASP
203
B
TYR
204
n
204
TYR
204
B
ALA
205
n
205
ALA
205
B
TYR
206
n
206
TYR
206
B
LYS
207
n
207
LYS
207
B
GLN
208
n
208
GLN
208
B
VAL
209
n
209
VAL
209
B
MET
210
n
210
MET
210
B
GLU
211
n
211
GLU
211
B
LEU
212
n
212
LEU
212
B
VAL
213
n
213
VAL
213
B
ASP
214
n
214
ASP
214
B
LEU
215
n
215
LEU
215
B
TYR
216
n
216
TYR
216
B
LEU
217
n
217
LEU
217
B
PRO
218
n
218
PRO
218
B
ASP
219
n
219
ASP
219
B
VAL
220
n
220
VAL
220
B
LEU
221
n
221
LEU
221
B
TRP
222
n
222
TRP
222
B
ASN
223
n
223
ASN
223
B
ASP
224
n
224
ASP
224
B
MET
225
n
225
MET
225
B
GLY
226
n
226
GLY
226
B
TRP
227
n
227
TRP
227
B
PRO
228
n
228
PRO
228
B
GLU
229
n
229
GLU
229
B
LYS
230
n
230
LYS
230
B
GLY
231
n
231
GLY
231
B
LYS
232
n
232
LYS
232
B
GLU
233
n
233
GLU
233
B
ASP
234
n
234
ASP
234
B
LEU
235
n
235
LEU
235
B
LYS
236
n
236
LYS
236
B
TYR
237
n
237
TYR
237
B
LEU
238
n
238
LEU
238
B
PHE
239
n
239
PHE
239
B
ALA
240
n
240
ALA
240
B
TYR
241
n
241
TYR
241
B
TYR
242
n
242
TYR
242
B
TYR
243
n
243
TYR
243
B
ASN
244
n
244
ASN
244
B
LYS
245
n
245
LYS
245
B
HIS
246
n
246
HIS
246
B
PRO
247
n
247
PRO
247
B
GLU
248
n
248
GLU
248
B
GLY
249
n
249
GLY
249
B
SER
250
n
250
SER
250
B
VAL
251
n
251
VAL
251
B
ASN
252
n
252
ASN
252
B
ASP
253
n
253
ASP
253
B
ARG
254
n
254
ARG
254
B
TRP
255
n
255
TRP
255
B
GLY
256
n
256
GLY
256
B
VAL
257
n
257
VAL
257
B
PRO
258
n
258
PRO
258
B
HIS
259
n
259
HIS
259
B
TRP
260
n
260
TRP
260
B
ASP
261
n
261
ASP
261
B
PHE
262
n
262
PHE
262
B
LYS
263
n
263
LYS
263
B
THR
264
n
264
THR
264
B
ALA
265
n
265
ALA
265
B
GLU
266
n
266
GLU
266
B
n
267
267
B
n
268
268
B
n
269
269
B
n
270
270
B
n
271
271
B
n
272
272
B
n
273
273
B
n
274
274
B
LEU
275
n
275
LEU
275
B
PRO
276
n
276
PRO
276
B
GLY
277
n
277
GLY
277
B
TYR
278
n
278
TYR
278
B
LYS
279
n
279
LYS
279
B
TRP
280
n
280
TRP
280
B
GLU
281
n
281
GLU
281
B
PHE
282
n
282
PHE
282
B
THR
283
n
283
THR
283
B
ARG
284
n
284
ARG
284
B
GLY
285
n
285
GLY
285
B
ILE
286
n
286
ILE
286
B
GLY
287
n
287
GLY
287
B
LEU
288
n
288
LEU
288
B
SER
289
n
289
SER
289
B
PHE
290
n
290
PHE
290
B
GLY
291
n
291
GLY
291
B
TYR
292
n
292
TYR
292
B
ASN
293
n
293
ASN
293
B
ARG
294
n
294
ARG
294
B
ASN
295
n
295
ASN
295
B
GLU
296
n
296
GLU
296
B
GLY
297
n
297
GLY
297
B
PRO
298
n
298
PRO
298
B
GLU
299
n
299
GLU
299
B
HIS
300
n
300
HIS
300
B
MET
301
n
301
MET
301
B
LEU
302
n
302
LEU
302
B
SER
303
n
303
SER
303
B
VAL
304
n
304
VAL
304
B
GLU
305
n
305
GLU
305
B
GLN
306
n
306
GLN
306
B
LEU
307
n
307
LEU
307
B
VAL
308
n
308
VAL
308
B
TYR
309
n
309
TYR
309
B
THR
310
n
310
THR
310
B
LEU
311
n
311
LEU
311
B
VAL
312
n
312
VAL
312
B
ASP
313
n
313
ASP
313
B
VAL
314
n
314
VAL
314
B
VAL
315
n
315
VAL
315
B
SER
316
n
316
SER
316
B
LYS
317
n
317
LYS
317
B
GLY
318
n
318
GLY
318
B
GLY
319
n
319
GLY
319
B
ASN
320
n
320
ASN
320
B
LEU
321
n
321
LEU
321
B
LEU
322
n
322
LEU
322
B
LEU
323
n
323
LEU
323
B
ASN
324
n
324
ASN
324
B
VAL
325
n
325
VAL
325
B
GLY
326
n
326
GLY
326
B
PRO
327
n
327
PRO
327
B
LYS
328
n
328
LYS
328
B
GLY
329
n
329
GLY
329
B
ASP
330
n
330
ASP
330
B
GLY
331
n
331
GLY
331
B
THR
332
n
332
THR
332
B
ILE
333
n
333
ILE
333
B
PRO
334
n
334
PRO
334
B
ASP
335
n
335
ASP
335
B
LEU
336
n
336
LEU
336
B
GLN
337
n
337
GLN
337
B
LYS
338
n
338
LYS
338
B
GLU
339
n
339
GLU
339
B
ARG
340
n
340
ARG
340
B
LEU
341
n
341
LEU
341
B
LEU
342
n
342
LEU
342
B
GLY
343
n
343
GLY
343
B
LEU
344
n
344
LEU
344
B
GLY
345
n
345
GLY
345
B
GLU
346
n
346
GLU
346
B
TRP
347
n
347
TRP
347
B
LEU
348
n
348
LEU
348
B
ARG
349
n
349
ARG
349
B
LYS
350
n
350
LYS
350
B
TYR
351
n
351
TYR
351
B
GLY
352
n
352
GLY
352
B
ASP
353
n
353
ASP
353
B
ALA
354
n
354
ALA
354
B
ILE
355
n
355
ILE
355
B
TYR
356
n
356
TYR
356
B
GLY
357
n
357
GLY
357
B
THR
358
n
358
THR
358
B
SER
359
n
359
SER
359
B
VAL
360
n
360
VAL
360
B
TRP
361
n
361
TRP
361
B
GLU
362
n
362
GLU
362
B
ARG
363
n
363
ARG
363
B
CYS
364
n
364
CYS
364
B
CYS
365
n
365
CYS
365
B
ALA
366
n
366
ALA
366
B
LYS
367
n
367
LYS
367
B
THR
368
n
368
THR
368
B
GLU
369
n
369
GLU
369
B
ASP
370
n
370
ASP
370
B
GLY
371
n
371
GLY
371
B
THR
372
n
372
THR
372
B
GLU
373
n
373
GLU
373
B
ILE
374
n
374
ILE
374
B
ARG
375
n
375
ARG
375
B
PHE
376
n
376
PHE
376
B
THR
377
n
377
THR
377
B
ARG
378
n
378
ARG
378
B
LYS
379
n
379
LYS
379
B
CYS
380
n
380
CYS
380
B
ASN
381
n
381
ASN
381
B
ARG
382
n
382
ARG
382
B
ILE
383
n
383
ILE
383
B
PHE
384
n
384
PHE
384
B
VAL
385
n
385
VAL
385
B
ILE
386
n
386
ILE
386
B
PHE
387
n
387
PHE
387
B
LEU
388
n
388
LEU
388
B
GLY
389
n
389
GLY
389
B
ILE
390
n
390
ILE
390
B
PRO
391
n
391
PRO
391
B
THR
392
n
392
THR
392
B
GLY
393
n
393
GLY
393
B
GLU
394
n
394
GLU
394
B
LYS
395
n
395
LYS
395
B
ILE
396
n
396
ILE
396
B
VAL
397
n
397
VAL
397
B
ILE
398
n
398
ILE
398
B
GLU
399
n
399
GLU
399
B
ASP
400
n
400
ASP
400
B
LEU
401
n
401
LEU
401
B
ASN
402
n
402
ASN
402
B
LEU
403
n
403
LEU
403
B
SER
404
n
404
SER
404
B
ALA
405
n
405
ALA
405
B
GLY
406
n
406
GLY
406
B
THR
407
n
407
THR
407
B
VAL
408
n
408
VAL
408
B
ARG
409
n
409
ARG
409
B
HIS
410
n
410
HIS
410
B
PHE
411
n
411
PHE
411
B
LEU
412
n
412
LEU
412
B
THR
413
n
413
THR
413
B
GLY
414
n
414
GLY
414
B
GLU
415
n
415
GLU
415
B
ARG
416
n
416
ARG
416
B
LEU
417
n
417
LEU
417
B
SER
418
n
418
SER
418
B
PHE
419
n
419
PHE
419
B
LYS
420
n
420
LYS
420
B
ASN
421
n
421
ASN
421
B
VAL
422
n
422
VAL
422
B
GLY
423
n
423
GLY
423
B
LYS
424
n
424
LYS
424
B
ASN
425
n
425
ASN
425
B
LEU
426
n
426
LEU
426
B
GLU
427
n
427
GLU
427
B
ILE
428
n
428
ILE
428
B
THR
429
n
429
THR
429
B
VAL
430
n
430
VAL
430
B
PRO
431
n
431
PRO
431
B
LYS
432
n
432
LYS
432
B
LYS
433
n
433
LYS
433
B
LEU
434
n
434
LEU
434
B
LEU
435
n
435
LEU
435
B
GLU
436
n
436
GLU
436
B
THR
437
n
437
THR
437
B
ASP
438
n
438
ASP
438
B
SER
439
n
439
SER
439
B
ILE
440
n
440
ILE
440
B
THR
441
n
441
THR
441
B
LEU
442
n
442
LEU
442
B
VAL
443
n
443
VAL
443
B
LEU
444
n
444
LEU
444
B
GLU
445
n
445
GLU
445
B
ALA
446
n
446
ALA
446
B
VAL
447
n
447
VAL
447
B
n
448
448
B
n
449
449
B
1.7256
0.0243
0.0422
1.3789
0.1119
1.4000
0.0541
-0.2156
0.1680
0.0798
-0.0189
0.0394
-0.2025
-0.2155
-0.0351
0.1216
0.0442
0.0394
0.1839
-0.0159
0.0182
refined
-22.5034
14.9584
65.4293
X-RAY DIFFRACTION
8.6439
0.6880
-0.3170
3.5264
-1.4220
4.7107
-0.0486
0.7397
0.4959
-0.5520
0.4277
0.3204
-0.0453
-0.6754
-0.3791
0.2983
0.1950
0.0014
0.4827
0.2176
0.4057
refined
-52.1578
25.0926
46.0867
X-RAY DIFFRACTION
2.3161
0.2268
0.0836
1.9157
-0.1354
1.2896
-0.0699
0.1747
0.6541
-0.0624
0.0576
0.0001
-0.2140
-0.0216
0.0122
0.1157
-0.0111
0.0089
0.0854
0.0748
0.1395
refined
5.1749
26.5372
23.9128
X-RAY DIFFRACTION
2.8802
-0.4116
-0.1688
1.5464
-0.6393
5.7360
-0.0566
-0.5713
0.8054
0.7406
0.1481
-0.0357
-0.5406
0.3907
-0.0915
0.6402
-0.0158
-0.1429
0.2486
-0.3478
1.1834
refined
18.7309
55.2161
42.8062
X-RAY DIFFRACTION
A
7
A
360
X-RAY DIFFRACTION
1
A
361
A
447
X-RAY DIFFRACTION
2
B
7
B
360
X-RAY DIFFRACTION
3
B
361
B
447
X-RAY DIFFRACTION
4
author_and_software_defined_assembly
PQS
6
hexameric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
-0.8660254038
0.0000000000
0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_555
-y,x-y,z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
3_555
-x+y,-x,z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
A
O
SER
250
A
O
SER
250
A
N
LEU
221
A
N
LEU
221
A
O
VAL
220
A
O
VAL
220
A
N
VAL
170
A
N
VAL
170
A
O
ARG
167
A
O
ARG
167
A
N
VAL
122
A
N
VAL
122
A
O
TYR
121
A
O
TYR
121
A
N
ILE
31
A
N
ILE
31
A
N
GLY
30
A
N
GLY
30
A
O
LEU
321
A
O
LEU
321
A
N
ASN
320
A
N
ASN
320
A
O
TRP
280
A
O
TRP
280
A
N
GLU
281
A
N
GLU
281
A
O
LYS
263
A
O
LYS
263
A
N
THR
368
A
N
THR
368
A
O
THR
372
A
O
THR
372
A
N
LYS
379
A
N
LYS
379
A
O
ARG
382
A
O
ARG
382
A
N
PHE
387
A
N
PHE
387
A
O
LEU
442
A
O
LEU
442
A
N
VAL
447
A
N
VAL
447
A
O
THR
407
A
O
THR
407
A
O
ILE
398
A
O
ILE
398
A
N
LEU
426
A
N
LEU
426
A
N
THR
429
A
N
THR
429
A
O
SER
418
A
O
SER
418
B
O
SER
250
B
O
SER
250
B
N
LEU
221
B
N
LEU
221
B
O
VAL
220
B
O
VAL
220
B
N
VAL
170
B
N
VAL
170
B
O
ARG
167
B
O
ARG
167
B
N
VAL
122
B
N
VAL
122
B
O
TYR
121
B
O
TYR
121
B
N
ILE
31
B
N
ILE
31
B
N
GLY
30
B
N
GLY
30
B
O
LEU
321
B
O
LEU
321
B
N
ASN
320
B
N
ASN
320
B
O
TRP
280
B
O
TRP
280
B
N
GLU
281
B
N
GLU
281
B
O
LYS
263
B
O
LYS
263
B
N
THR
368
B
N
THR
368
B
O
THR
372
B
O
THR
372
B
N
LYS
379
B
N
LYS
379
B
O
ARG
382
B
O
ARG
382
B
N
PHE
387
B
N
PHE
387
B
O
LEU
442
B
O
LEU
442
B
N
VAL
447
B
N
VAL
447
B
O
THR
407
B
O
THR
407
B
O
ILE
398
B
O
ILE
398
B
N
LEU
426
B
N
LEU
426
B
N
THR
429
B
N
THR
429
B
O
SER
418
B
O
SER
418
1
A
MET
1
A
MET
1
1
Y
1
A
ILE
2
A
ILE
2
1
Y
1
A
SER
3
A
SER
3
1
Y
1
A
MET
4
A
MET
4
1
Y
1
A
LYS
5
A
LYS
5
1
Y
1
A
PRO
6
A
PRO
6
1
Y
1
A
THR
47
A
THR
47
1
Y
1
A
GLY
48
A
GLY
48
1
Y
1
A
GLU
49
A
GLU
49
1
Y
1
A
LEU
50
A
LEU
50
1
Y
1
A
GLY
51
A
GLY
51
1
Y
1
A
LYS
52
A
LYS
52
1
Y
1
A
VAL
53
A
VAL
53
1
Y
1
A
PRO
54
A
PRO
54
1
Y
1
A
MET
55
A
MET
55
1
Y
1
A
TYR
267
A
TYR
267
1
Y
1
A
HIS
268
A
HIS
268
1
Y
1
A
VAL
269
A
VAL
269
1
Y
1
A
ASN
270
A
ASN
270
1
Y
1
A
TYR
271
A
TYR
271
1
Y
1
A
PRO
272
A
PRO
272
1
Y
1
A
GLY
273
A
GLY
273
1
Y
1
A
GLY
297
A
GLY
297
1
Y
1
A
PRO
298
A
PRO
298
1
Y
1
A
GLU
299
A
GLU
299
1
Y
1
A
GLU
448
A
GLU
448
1
Y
1
A
GLU
449
A
GLU
449
1
Y
1
B
MET
1
B
MET
1
1
Y
1
B
ILE
2
B
ILE
2
1
Y
1
B
SER
3
B
SER
3
1
Y
1
B
MET
4
B
MET
4
1
Y
1
B
LYS
5
B
LYS
5
1
Y
1
B
PRO
6
B
PRO
6
1
Y
1
B
THR
47
B
THR
47
1
Y
1
B
GLY
48
B
GLY
48
1
Y
1
B
GLU
49
B
GLU
49
1
Y
1
B
LEU
50
B
LEU
50
1
Y
1
B
GLY
51
B
GLY
51
1
Y
1
B
LYS
52
B
LYS
52
1
Y
1
B
VAL
53
B
VAL
53
1
Y
1
B
PRO
54
B
PRO
54
1
Y
1
B
MET
55
B
MET
55
1
Y
1
B
TYR
267
B
TYR
267
1
Y
1
B
HIS
268
B
HIS
268
1
Y
1
B
VAL
269
B
VAL
269
1
Y
1
B
ASN
270
B
ASN
270
1
Y
1
B
TYR
271
B
TYR
271
1
Y
1
B
PRO
272
B
PRO
272
1
Y
1
B
GLY
273
B
GLY
273
1
Y
1
B
ASP
274
B
ASP
274
1
Y
1
B
GLU
448
B
GLU
448
1
Y
1
B
GLU
449
B
GLU
449
1
Y
1
6.22
0.90
118.30
124.52
A
A
A
CB
CG
OD2
ASP
ASP
ASP
130
130
130
N
1
5.60
0.90
118.30
123.90
A
A
A
CB
CG
OD2
ASP
ASP
ASP
438
438
438
N
1
6.42
0.90
118.30
124.72
B
B
B
CB
CG
OD2
ASP
ASP
ASP
353
353
353
N
1
B
B
CG
CD2
HIS
HIS
300
300
0.073
0.009
1.354
1.427
N
1
A
LYS
28
74.50
-39.67
1
A
GLU
76
82.27
-14.11
1
A
ASN
197
67.69
-13.82
1
A
HIS
246
-155.68
81.79
1
A
ALA
265
-173.13
141.52
1
A
ASN
295
-56.44
-6.57
1
A
ILE
355
-128.18
-67.13
1
A
LYS
379
-150.01
77.22
1
A
CYS
380
70.62
-119.96
1
A
ASP
400
34.48
47.88
1
A
ALA
405
-23.60
87.17
1
A
ILE
440
76.60
-51.00
1
A
GLU
445
-160.73
86.02
1
B
LYS
28
74.72
-38.27
1
B
ALA
102
36.00
51.72
1
B
ASN
197
67.57
-11.95
1
B
HIS
246
-156.10
80.90
1
B
ILE
355
-128.42
-66.41
1
B
CYS
380
68.60
-119.36
1
B
ASP
400
36.82
51.70
1
B
ALA
405
-23.58
88.84
1
B
ILE
440
72.88
-54.84
1
B
GLU
445
-165.18
107.98
-2.32000
-1.16000
0.00000
-2.33000
0.00000
3.49000
0.954
0.942
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. SOLVENT NO WATER MOLECULES HAVE BEEN ADDED GIVEN THE MODEST RESOLUTION AND THE HIGH OVERALL DISORDER OF THE STRUCTURE.
0.230
0.201
0.203
2.80
19.76
1848
24054
7.100
97.5
14.034
0.274
RANDOM
LIKELY RESIDUAL
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.360
0.80
0.80
1.40
NATIVE ALPHA-L-FUCOSIDASE, PDB ENTRY 1HL8
MAXIMUM LIKELIHOOD
MASK
2.80
19.76
0
7026
22
0
7004
0.007
0.021
7252
0.005
0.020
6321
0.987
1.939
9847
0.757
3.000
14708
4.968
5.000
839
0.058
0.200
1003
0.005
0.020
7990
0.007
0.020
1616
0.170
0.200
1381
0.212
0.200
6925
0.082
0.200
3969
0.136
0.200
119
0.091
0.200
24
0.200
0.200
112
0.193
0.200
9
0.304
1.500
4193
0.573
2.000
6759
0.567
3.000
3059
0.989
4.500
3088
0.3540
0.3100
2.87
128
1762
20
100.81
2.800
57.700
1ODU
24598
0.05600
1
6.8000
3.900
98.1
0.44200
2.80
2.87
1.600
1
3.90
98.1
refinement
REFMAC
5.1.24
data reduction
DENZO
data scaling
SCALA
phasing
MOLREP
CRYSTAL STRUCTURE OF THERMOTOGA MARITIMA ALPHA-FUCOSIDASE IN COMPLEX WITH FUCOSE
1
N
N
1
N
N
2
N
N
2
N
N
BETWEEN THE ISOLATED CHAINS AND THAT FOR
THE CHAINSIN THE COMPLEX IS IN AVERAGE 2464 (+/-
52) ANGSTROM**2.
A
ASP
11
A
ASP
11
HELX_P
A
ARG
16
A
ARG
16
1
1
6
A
PRO
21
A
PRO
21
HELX_P
A
LYS
28
A
LYS
28
1
2
8
A
GLY
36
A
GLY
36
HELX_P
A
VAL
40
A
VAL
40
5
3
5
A
TYR
64
A
TYR
64
HELX_P
A
GLU
66
A
GLU
66
5
4
3
A
TRP
67
A
TRP
67
HELX_P
A
ILE
74
A
ILE
74
1
5
8
A
SER
77
A
SER
77
HELX_P
A
TYR
87
A
TYR
87
1
6
11
A
GLU
92
A
GLU
92
HELX_P
A
GLU
94
A
GLU
94
5
7
3
A
LYS
95
A
LYS
95
HELX_P
A
PHE
100
A
PHE
100
1
8
6
A
ASP
106
A
ASP
106
HELX_P
A
ALA
117
A
ALA
117
1
9
12
A
ASP
152
A
ASP
152
HELX_P
A
ALA
164
A
ALA
164
1
10
13
A
ASP
177
A
ASP
177
HELX_P
A
THR
181
A
THR
181
5
11
5
A
TYR
187
A
TYR
187
HELX_P
A
TYR
193
A
TYR
193
5
12
7
A
THR
198
A
THR
198
HELX_P
A
LEU
217
A
LEU
217
1
13
20
A
PRO
228
A
PRO
228
HELX_P
A
LYS
232
A
LYS
232
5
14
5
A
GLU
233
A
GLU
233
HELX_P
A
HIS
246
A
HIS
246
1
15
14
A
SER
303
A
SER
303
HELX_P
A
LYS
317
A
LYS
317
1
16
15
A
PRO
334
A
PRO
334
HELX_P
A
GLY
352
A
GLY
352
1
17
19
A
ASP
353
A
ASP
353
HELX_P
A
ILE
355
A
ILE
355
5
18
3
A
PRO
431
A
PRO
431
HELX_P
A
GLU
436
A
GLU
436
1
19
6
B
ASP
11
B
ASP
11
HELX_P
B
ARG
16
B
ARG
16
1
20
6
B
PRO
21
B
PRO
21
HELX_P
B
LYS
28
B
LYS
28
1
21
8
B
GLY
36
B
GLY
36
HELX_P
B
VAL
40
B
VAL
40
5
22
5
B
TYR
64
B
TYR
64
HELX_P
B
GLU
66
B
GLU
66
5
23
3
B
TRP
67
B
TRP
67
HELX_P
B
ILE
74
B
ILE
74
1
24
8
B
SER
77
B
SER
77
HELX_P
B
TYR
87
B
TYR
87
1
25
11
B
GLU
92
B
GLU
92
HELX_P
B
GLU
94
B
GLU
94
5
26
3
B
LYS
95
B
LYS
95
HELX_P
B
PHE
100
B
PHE
100
1
27
6
B
ASP
106
B
ASP
106
HELX_P
B
GLY
118
B
GLY
118
1
28
13
B
ASP
152
B
ASP
152
HELX_P
B
ALA
164
B
ALA
164
1
29
13
B
ASP
177
B
ASP
177
HELX_P
B
THR
181
B
THR
181
5
30
5
B
TYR
187
B
TYR
187
HELX_P
B
TYR
193
B
TYR
193
5
31
7
B
THR
198
B
THR
198
HELX_P
B
LEU
217
B
LEU
217
1
32
20
B
PRO
228
B
PRO
228
HELX_P
B
LYS
232
B
LYS
232
5
33
5
B
GLU
233
B
GLU
233
HELX_P
B
HIS
246
B
HIS
246
1
34
14
B
GLY
297
B
GLY
297
HELX_P
B
MET
301
B
MET
301
5
35
5
B
SER
303
B
SER
303
HELX_P
B
LYS
317
B
LYS
317
1
36
15
B
GLU
339
B
GLU
339
HELX_P
B
GLY
352
B
GLY
352
1
37
14
B
ASP
353
B
ASP
353
HELX_P
B
ILE
355
B
ILE
355
5
38
3
B
PRO
431
B
PRO
431
HELX_P
B
GLU
436
B
GLU
436
1
39
6
disulf
2.056
A
CYS
364
A
SG
CYS
364
1_555
A
CYS
365
A
SG
CYS
365
1_555
disulf
2.047
B
CYS
364
B
SG
CYS
364
1_555
B
CYS
365
B
SG
CYS
365
1_555
HYDROLASE
HYDROLASE, GLYCOSIDE HYDROLASE, ALPHA-L-FUCOSIDASE, PRODUCT COMPLEX, THERMOSTABLE
given
-0.700160
-0.713980
-0.000140
-0.713800
0.699990
-0.022320
0.016040
-0.015530
-0.999750
0.17581
1.35430
90.02791
Q9WYE2
UNP
1
Q9WYE2
1
449
1ODU
1
449
Q9WYE2
A
1
1
449
1
449
1ODU
1
449
Q9WYE2
B
1
1
449
8
5
3
8
5
3
parallel
parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
SER
250
A
SER
250
A
VAL
251
A
VAL
251
A
VAL
220
A
VAL
220
A
ASP
224
A
ASP
224
A
ARG
167
A
ARG
167
A
SER
173
A
SER
173
A
TYR
121
A
TYR
121
A
LYS
127
A
LYS
127
A
PHE
29
A
PHE
29
A
HIS
34
A
HIS
34
A
GLY
319
A
GLY
319
A
VAL
325
A
VAL
325
A
LYS
279
A
LYS
279
A
ILE
286
A
ILE
286
A
LYS
263
A
LYS
263
A
ALA
265
A
ALA
265
A
CYS
365
A
CYS
365
A
THR
368
A
THR
368
A
THR
372
A
THR
372
A
LYS
379
A
LYS
379
A
ARG
382
A
ARG
382
A
PHE
387
A
PHE
387
A
LEU
442
A
LEU
442
A
VAL
447
A
VAL
447
A
THR
407
A
THR
407
A
HIS
410
A
HIS
410
A
LYS
395
A
LYS
395
A
ILE
398
A
ILE
398
A
ASN
425
A
ASN
425
A
THR
429
A
THR
429
A
LEU
417
A
LEU
417
A
VAL
422
A
VAL
422
B
SER
250
B
SER
250
B
VAL
251
B
VAL
251
B
VAL
220
B
VAL
220
B
ASP
224
B
ASP
224
B
ARG
167
B
ARG
167
B
SER
173
B
SER
173
B
TYR
121
B
TYR
121
B
LYS
127
B
LYS
127
B
PHE
29
B
PHE
29
B
HIS
34
B
HIS
34
B
GLY
319
B
GLY
319
B
VAL
325
B
VAL
325
B
LYS
279
B
LYS
279
B
ILE
286
B
ILE
286
B
LYS
263
B
LYS
263
B
ALA
265
B
ALA
265
B
CYS
365
B
CYS
365
B
THR
368
B
THR
368
B
THR
372
B
THR
372
B
LYS
379
B
LYS
379
B
ARG
382
B
ARG
382
B
PHE
387
B
PHE
387
B
LEU
442
B
LEU
442
B
VAL
447
B
VAL
447
B
THR
407
B
THR
407
B
HIS
410
B
HIS
410
B
LYS
395
B
LYS
395
B
ILE
398
B
ILE
398
B
ASN
425
B
ASN
425
B
THR
429
B
THR
429
B
LEU
417
B
LEU
417
B
VAL
422
B
VAL
422
155
H 3 2