0.019231 0.000000 0.000000 0.000000 0.016835 0.000000 0.000000 0.000000 0.016077 0.00000 0.00000 0.00000 Thanki, N. Kervinen, J. Wlodawer, A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 52.000 59.400 62.200 C30 H45 N3 O6 543.695 di-tert-butyl {iminobis[(2S,3S)-3-hydroxy-1-phenylbutane-4,2-diyl]}biscarbamate BMS-182193 peptide-like C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N O N 2 N C N 3 N O N 4 N C N 5 N C N 6 N C N 7 N C N 8 R C N 9 N O N 10 S C N 11 N N N 12 N C Y 13 N C Y 14 N C Y 15 N C Y 16 N C Y 17 N C Y 18 N C N 19 N N N 20 N C N 21 N C N 22 R C N 23 N O N 24 S C N 25 N N N 26 N C Y 27 N C Y 28 N C Y 29 N C Y 30 N C Y 31 N C Y 32 N C N 33 N O N 34 N C N 35 N O N 36 N C N 37 N C N 38 N C N 39 N C N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N N N 86 S C N 87 N C N 88 N O N 89 N C N 90 N O N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N N N 99 S C N 100 N C N 101 N O N 102 N C N 103 N C N 104 N C N 105 N N N 106 N C N 107 N N N 108 N N N 109 N O N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N N N 126 S C N 127 N C N 128 N O N 129 N C N 130 N C N 131 N O N 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N N N 143 S C N 144 N C N 145 N O N 146 N C N 147 N C N 148 N O N 149 N O N 150 N O N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N N N 159 R C N 160 N C N 161 N O N 162 N C N 163 N S N 164 N O N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N N N 173 S C N 174 N C N 175 N O N 176 N C N 177 N C N 178 N C N 179 N O N 180 N N N 181 N O N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N N N 193 S C N 194 N C N 195 N O N 196 N C N 197 N C N 198 N C N 199 N O N 200 N O N 201 N O N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N N N 212 N C N 213 N C N 214 N O N 215 N O N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N N N 222 S C N 223 N C N 224 N O N 225 N C Y 226 N C Y 227 N N Y 228 N C Y 229 N C Y 230 N N N 231 N O N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N O N 243 N H N 244 N H N 245 N N N 246 S C N 247 N C N 248 N O N 249 S C N 250 N C N 251 N C N 252 N C N 253 N O N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N N N 268 S C N 269 N C N 270 N O N 271 N C N 272 N C N 273 N C N 274 N C N 275 N O N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N N N 290 S C N 291 N C N 292 N O N 293 N C N 294 N C N 295 N C N 296 N C N 297 N N N 298 N O N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N N N 315 S C N 316 N C N 317 N O N 318 N C N 319 N C N 320 N S N 321 N C N 322 N O N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N N N 335 S C N 336 N C N 337 N O N 338 N C Y 339 N C Y 340 N C Y 341 N C Y 342 N C Y 343 N C Y 344 N C N 345 N O N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N N N 358 S C N 359 N C N 360 N O N 361 N C N 362 N C N 363 N C N 364 N O N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N N N 375 S C N 376 N C N 377 N O N 378 N C N 379 N O N 380 N O N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N N N 389 S C N 390 N C N 391 N O N 392 R C N 393 N O N 394 N C N 395 N O N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N N N 406 S C N 407 N C N 408 N O N 409 N C Y 410 N C Y 411 N C Y 412 N C Y 413 N N Y 414 N C Y 415 N C Y 416 N C Y 417 N C Y 418 N C N 419 N O N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N N N 433 S C N 434 N C N 435 N O N 436 N C Y 437 N C Y 438 N C Y 439 N C Y 440 N C Y 441 N C Y 442 N C N 443 N O N 444 N O N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N N N 457 S C N 458 N C N 459 N O N 460 N C N 461 N C N 462 N C N 463 N O N 464 N H N 465 N H N 466 N H N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 1 N doub N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing Y 27 N doub Y 28 N sing Y 29 N sing N 30 N sing Y 31 N doub N 32 N sing Y 33 N doub N 34 N sing Y 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing Y 56 N doub Y 57 N sing Y 58 N sing N 59 N sing Y 60 N doub N 61 N sing Y 62 N doub N 63 N sing Y 64 N sing N 65 N sing N 66 N sing N 67 N doub N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N doub N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N doub N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N doub N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N doub N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N doub N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N doub N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N doub N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N doub N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N doub N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N doub N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N sing Y 225 N sing Y 226 N doub Y 227 N doub N 228 N sing Y 229 N sing N 230 N sing Y 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N doub N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N doub N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N doub N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N doub N 329 N sing N 330 N sing N 331 N sing N 332 N sing Y 333 N doub Y 334 N sing Y 335 N sing N 336 N sing Y 337 N doub N 338 N sing Y 339 N doub N 340 N sing Y 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N doub N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N doub N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N doub N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N doub N 398 N sing N 399 N sing N 400 N sing N 401 N sing Y 402 N doub Y 403 N sing Y 404 N sing N 405 N sing Y 406 N doub Y 407 N sing Y 408 N sing N 409 N sing Y 410 N sing Y 411 N doub N 412 N sing Y 413 N doub N 414 N sing Y 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N doub N 426 N sing N 427 N sing N 428 N sing N 429 N sing Y 430 N doub Y 431 N sing Y 432 N sing N 433 N sing Y 434 N doub N 435 N sing Y 436 N doub N 437 N sing Y 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N doub N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing NE Protein Pept.Lett. PPELEN 2077 0929-8665 3 399 -1 Structural Analysis of the Native and Drug-Resistant HIV-1 Proteinases Complexed with an Aminodiol Inhibitor 1996 10.2210/pdb1odw/pdb pdb_00001odw 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 293 1 IMAGE PLATE 1994-09-26 MAR scanner 300 mm plate M x-ray 1 1.5418 1.0 1.5418 10789.729 HIV-1 PROTEASE 3.4.23.16 2 man polymer 543.695 di-tert-butyl {iminobis[(2S,3S)-3-hydroxy-1-phenylbutane-4,2-diyl]}biscarbamate 1 syn non-polymer 18.015 water 65 nat water RETROPEPSIN no no PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n HIV-1 sample gag-pol 11676 Human immunodeficiency virus 1 562 Escherichia coli PMAL-C2 1 2.22 44.71 chem_comp_atom chem_comp_bond database_2 pdbx_database_status struct_site repository Initial release Version format compliance Atomic model Database references Derived calculations Non-polymer description Source and taxonomy Structure summary Version format compliance Data collection Database references Derived calculations Other 1 0 1997-04-01 1 1 2008-03-24 1 2 2011-07-13 1 3 2024-02-14 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y BNL 1996-09-16 REL REL 0E8 di-tert-butyl {iminobis[(2S,3S)-3-hydroxy-1-phenylbutane-4,2-diyl]}biscarbamate HOH water OTB 201 2 0E8 0E8 201 A HOH 301 3 HOH HOH 301 A HOH 304 3 HOH HOH 304 A HOH 305 3 HOH HOH 305 A HOH 306 3 HOH HOH 306 A HOH 307 3 HOH HOH 307 A HOH 310 3 HOH HOH 310 A HOH 311 3 HOH HOH 311 A HOH 312 3 HOH HOH 312 A HOH 313 3 HOH HOH 313 A HOH 315 3 HOH HOH 315 A HOH 316 3 HOH HOH 316 A HOH 320 3 HOH HOH 320 A HOH 321 3 HOH HOH 321 A HOH 323 3 HOH HOH 323 A HOH 330 3 HOH HOH 330 A HOH 331 3 HOH HOH 331 A HOH 358 3 HOH HOH 358 A HOH 360 3 HOH HOH 360 A HOH 367 3 HOH HOH 367 A HOH 368 3 HOH HOH 368 A HOH 375 3 HOH HOH 375 A HOH 384 3 HOH HOH 384 A HOH 387 3 HOH HOH 387 A HOH 391 3 HOH HOH 391 A HOH 395 3 HOH HOH 395 A HOH 400 3 HOH HOH 400 A HOH 402 3 HOH HOH 402 A HOH 403 3 HOH HOH 403 A HOH 409 3 HOH HOH 409 A HOH 410 3 HOH HOH 410 A HOH 411 3 HOH HOH 411 A HOH 412 3 HOH HOH 412 A HOH 413 3 HOH HOH 413 A HOH 318 3 HOH HOH 318 B HOH 319 3 HOH HOH 319 B HOH 326 3 HOH HOH 326 B HOH 327 3 HOH HOH 327 B HOH 332 3 HOH HOH 332 B HOH 337 3 HOH HOH 337 B HOH 338 3 HOH HOH 338 B HOH 340 3 HOH HOH 340 B HOH 341 3 HOH HOH 341 B HOH 345 3 HOH HOH 345 B HOH 346 3 HOH HOH 346 B HOH 348 3 HOH HOH 348 B HOH 349 3 HOH HOH 349 B HOH 350 3 HOH HOH 350 B HOH 352 3 HOH HOH 352 B HOH 353 3 HOH HOH 353 B HOH 356 3 HOH HOH 356 B HOH 361 3 HOH HOH 361 B HOH 362 3 HOH HOH 362 B HOH 364 3 HOH HOH 364 B HOH 376 3 HOH HOH 376 B HOH 381 3 HOH HOH 381 B HOH 385 3 HOH HOH 385 B HOH 388 3 HOH HOH 388 B HOH 399 3 HOH HOH 399 B HOH 401 3 HOH HOH 401 B HOH 404 3 HOH HOH 404 B HOH 405 3 HOH HOH 405 B HOH 406 3 HOH HOH 406 B HOH 407 3 HOH HOH 407 B HOH 408 3 HOH HOH 408 B HOH 414 3 HOH HOH 414 B PRO 1 n 1 PRO 1 A GLN 2 n 2 GLN 2 A VAL 3 n 3 VAL 3 A THR 4 n 4 THR 4 A LEU 5 n 5 LEU 5 A TRP 6 n 6 TRP 6 A GLN 7 n 7 GLN 7 A ARG 8 n 8 ARG 8 A PRO 9 n 9 PRO 9 A LEU 10 n 10 LEU 10 A VAL 11 n 11 VAL 11 A THR 12 n 12 THR 12 A ILE 13 n 13 ILE 13 A LYS 14 n 14 LYS 14 A ILE 15 n 15 ILE 15 A GLY 16 n 16 GLY 16 A GLY 17 n 17 GLY 17 A GLN 18 n 18 GLN 18 A LEU 19 n 19 LEU 19 A LYS 20 n 20 LYS 20 A GLU 21 n 21 GLU 21 A ALA 22 n 22 ALA 22 A LEU 23 n 23 LEU 23 A LEU 24 n 24 LEU 24 A ASP 25 n 25 ASP 25 A THR 26 n 26 THR 26 A GLY 27 n 27 GLY 27 A ALA 28 n 28 ALA 28 A ASP 29 n 29 ASP 29 A ASP 30 n 30 ASP 30 A THR 31 n 31 THR 31 A VAL 32 n 32 VAL 32 A LEU 33 n 33 LEU 33 A GLU 34 n 34 GLU 34 A GLU 35 n 35 GLU 35 A MET 36 n 36 MET 36 A SER 37 n 37 SER 37 A LEU 38 n 38 LEU 38 A PRO 39 n 39 PRO 39 A GLY 40 n 40 GLY 40 A ARG 41 n 41 ARG 41 A TRP 42 n 42 TRP 42 A LYS 43 n 43 LYS 43 A PRO 44 n 44 PRO 44 A LYS 45 n 45 LYS 45 A MET 46 n 46 MET 46 A ILE 47 n 47 ILE 47 A GLY 48 n 48 GLY 48 A GLY 49 n 49 GLY 49 A ILE 50 n 50 ILE 50 A GLY 51 n 51 GLY 51 A GLY 52 n 52 GLY 52 A PHE 53 n 53 PHE 53 A ILE 54 n 54 ILE 54 A LYS 55 n 55 LYS 55 A VAL 56 n 56 VAL 56 A ARG 57 n 57 ARG 57 A GLN 58 n 58 GLN 58 A TYR 59 n 59 TYR 59 A ASP 60 n 60 ASP 60 A GLN 61 n 61 GLN 61 A ILE 62 n 62 ILE 62 A LEU 63 n 63 LEU 63 A ILE 64 n 64 ILE 64 A GLU 65 n 65 GLU 65 A ILE 66 n 66 ILE 66 A CYS 67 n 67 CYS 67 A GLY 68 n 68 GLY 68 A HIS 69 n 69 HIS 69 A LYS 70 n 70 LYS 70 A ALA 71 n 71 ALA 71 A ILE 72 n 72 ILE 72 A GLY 73 n 73 GLY 73 A THR 74 n 74 THR 74 A VAL 75 n 75 VAL 75 A LEU 76 n 76 LEU 76 A VAL 77 n 77 VAL 77 A GLY 78 n 78 GLY 78 A PRO 79 n 79 PRO 79 A THR 80 n 80 THR 80 A PRO 81 n 81 PRO 81 A VAL 82 n 82 VAL 82 A ASN 83 n 83 ASN 83 A ILE 84 n 84 ILE 84 A ILE 85 n 85 ILE 85 A GLY 86 n 86 GLY 86 A ARG 87 n 87 ARG 87 A ASN 88 n 88 ASN 88 A LEU 89 n 89 LEU 89 A LEU 90 n 90 LEU 90 A THR 91 n 91 THR 91 A GLN 92 n 92 GLN 92 A ILE 93 n 93 ILE 93 A GLY 94 n 94 GLY 94 A CYS 95 n 95 CYS 95 A THR 96 n 96 THR 96 A LEU 97 n 97 LEU 97 A ASN 98 n 98 ASN 98 A PHE 99 n 99 PHE 99 A PRO 1 n 1 PRO 1 B GLN 2 n 2 GLN 2 B VAL 3 n 3 VAL 3 B THR 4 n 4 THR 4 B LEU 5 n 5 LEU 5 B TRP 6 n 6 TRP 6 B GLN 7 n 7 GLN 7 B ARG 8 n 8 ARG 8 B PRO 9 n 9 PRO 9 B LEU 10 n 10 LEU 10 B VAL 11 n 11 VAL 11 B THR 12 n 12 THR 12 B ILE 13 n 13 ILE 13 B LYS 14 n 14 LYS 14 B ILE 15 n 15 ILE 15 B GLY 16 n 16 GLY 16 B GLY 17 n 17 GLY 17 B GLN 18 n 18 GLN 18 B LEU 19 n 19 LEU 19 B LYS 20 n 20 LYS 20 B GLU 21 n 21 GLU 21 B ALA 22 n 22 ALA 22 B LEU 23 n 23 LEU 23 B LEU 24 n 24 LEU 24 B ASP 25 n 25 ASP 25 B THR 26 n 26 THR 26 B GLY 27 n 27 GLY 27 B ALA 28 n 28 ALA 28 B ASP 29 n 29 ASP 29 B ASP 30 n 30 ASP 30 B THR 31 n 31 THR 31 B VAL 32 n 32 VAL 32 B LEU 33 n 33 LEU 33 B GLU 34 n 34 GLU 34 B GLU 35 n 35 GLU 35 B MET 36 n 36 MET 36 B SER 37 n 37 SER 37 B LEU 38 n 38 LEU 38 B PRO 39 n 39 PRO 39 B GLY 40 n 40 GLY 40 B ARG 41 n 41 ARG 41 B TRP 42 n 42 TRP 42 B LYS 43 n 43 LYS 43 B PRO 44 n 44 PRO 44 B LYS 45 n 45 LYS 45 B MET 46 n 46 MET 46 B ILE 47 n 47 ILE 47 B GLY 48 n 48 GLY 48 B GLY 49 n 49 GLY 49 B ILE 50 n 50 ILE 50 B GLY 51 n 51 GLY 51 B GLY 52 n 52 GLY 52 B PHE 53 n 53 PHE 53 B ILE 54 n 54 ILE 54 B LYS 55 n 55 LYS 55 B VAL 56 n 56 VAL 56 B ARG 57 n 57 ARG 57 B GLN 58 n 58 GLN 58 B TYR 59 n 59 TYR 59 B ASP 60 n 60 ASP 60 B GLN 61 n 61 GLN 61 B ILE 62 n 62 ILE 62 B LEU 63 n 63 LEU 63 B ILE 64 n 64 ILE 64 B GLU 65 n 65 GLU 65 B ILE 66 n 66 ILE 66 B CYS 67 n 67 CYS 67 B GLY 68 n 68 GLY 68 B HIS 69 n 69 HIS 69 B LYS 70 n 70 LYS 70 B ALA 71 n 71 ALA 71 B ILE 72 n 72 ILE 72 B GLY 73 n 73 GLY 73 B THR 74 n 74 THR 74 B VAL 75 n 75 VAL 75 B LEU 76 n 76 LEU 76 B VAL 77 n 77 VAL 77 B GLY 78 n 78 GLY 78 B PRO 79 n 79 PRO 79 B THR 80 n 80 THR 80 B PRO 81 n 81 PRO 81 B VAL 82 n 82 VAL 82 B ASN 83 n 83 ASN 83 B ILE 84 n 84 ILE 84 B ILE 85 n 85 ILE 85 B GLY 86 n 86 GLY 86 B ARG 87 n 87 ARG 87 B ASN 88 n 88 ASN 88 B LEU 89 n 89 LEU 89 B LEU 90 n 90 LEU 90 B THR 91 n 91 THR 91 B GLN 92 n 92 GLN 92 B ILE 93 n 93 ILE 93 B GLY 94 n 94 GLY 94 B CYS 95 n 95 CYS 95 B THR 96 n 96 THR 96 B LEU 97 n 97 LEU 97 B ASN 98 n 98 ASN 98 B PHE 99 n 99 PHE 99 B author_and_software_defined_assembly PISA 2 dimeric 5340 -17 9190 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O GLN 18 A O GLN 18 A N ILE 15 A N ILE 15 A O LYS 14 A O LYS 14 A N GLU 65 A N GLU 65 A O ILE 62 A O ILE 62 A N GLY 73 A N GLY 73 A O LYS 43 A O LYS 43 A N GLN 58 A N GLN 58 A O ARG 57 A O ARG 57 A N VAL 77 A N VAL 77 A O THR 96 A O THR 96 B N ASN 98 B N ASN 98 B O VAL 11 B O VAL 11 B N ALA 22 B N ALA 22 B O LEU 33 B O LEU 33 B N LEU 76 B N LEU 76 B O VAL 75 B O VAL 75 B N TYR 59 B N TYR 59 B O GLY 52 B O GLY 52 B N GLY 49 B N GLY 49 B O ILE 62 B O ILE 62 B N GLY 73 B N GLY 73 1 9.29 0.90 118.30 127.59 A A A CB CG OD1 ASP ASP ASP 29 29 29 N 1 -14.63 0.90 118.30 103.67 A A A CB CG OD2 ASP ASP ASP 29 29 29 N 1 -16.48 2.00 110.40 93.92 A A A CB CA C GLU GLU GLU 34 34 34 N 1 21.90 2.20 113.40 135.30 A A A CA CB CG GLU GLU GLU 34 34 34 N 1 -7.85 1.20 123.30 115.45 A A A OE1 CD OE2 GLU GLU GLU 34 34 34 N 1 13.70 2.00 118.30 132.00 A A A CG CD OE2 GLU GLU GLU 34 34 34 N 1 17.68 2.20 113.40 131.08 A A A CA CB CG LYS LYS LYS 43 43 43 N 1 6.71 1.10 119.40 126.11 A A A NH1 CZ NH2 ARG ARG ARG 57 57 57 N 1 -5.33 0.50 120.30 114.97 A A A NE CZ NH1 ARG ARG ARG 57 57 57 N 1 10.89 1.60 122.70 133.59 A A A O C N ASP ASP GLN 60 60 61 Y 1 18.90 2.20 113.40 132.30 A A A CA CB CG GLN GLN GLN 61 61 61 N 1 -12.46 1.40 110.10 97.64 A A A N CA CB ALA ALA ALA 71 71 71 N 1 9.85 1.60 122.70 132.55 A A A O C N GLY GLY THR 73 73 74 Y 1 12.91 2.00 110.90 123.81 A A A CA CB CG2 ILE ILE ILE 84 84 84 N 1 9.60 0.50 120.30 129.90 A A A NE CZ NH1 ARG ARG ARG 87 87 87 N 1 -3.39 0.50 120.30 116.91 A A A NE CZ NH2 ARG ARG ARG 87 87 87 N 1 11.30 1.80 110.60 121.90 A A A N CA CB PHE PHE PHE 99 99 99 N 1 10.12 1.50 110.90 121.02 B B B CA CB CG2 VAL VAL VAL 3 3 3 N 1 16.93 2.20 113.40 130.33 B B B CA CB CG GLN GLN GLN 7 7 7 N 1 9.66 1.40 123.60 133.26 B B B CD NE CZ ARG ARG ARG 8 8 8 N 1 3.45 0.50 120.30 123.75 B B B NE CZ NH1 ARG ARG ARG 8 8 8 N 1 -4.32 0.50 120.30 115.98 B B B NE CZ NH2 ARG ARG ARG 8 8 8 N 1 11.63 1.90 110.20 121.83 B B B CB CA C LEU LEU LEU 19 19 19 N 1 17.52 2.20 113.40 130.92 B B B CA CB CG LYS LYS LYS 20 20 20 N 1 -7.38 0.90 118.30 110.92 B B B CB CG OD1 ASP ASP ASP 30 30 30 N 1 -13.08 2.00 110.40 97.32 B B B CB CA C GLU GLU GLU 34 34 34 N 1 10.00 1.20 123.30 133.30 B B B OE1 CD OE2 GLU GLU GLU 34 34 34 N 1 -12.73 2.00 118.30 105.57 B B B CG CD OE2 GLU GLU GLU 34 34 34 N 1 22.94 1.70 113.30 136.24 B B B CA CB CG MET MET MET 36 36 36 N 1 -10.22 1.70 113.30 103.08 B B B CA CB CG MET MET MET 46 46 46 N 1 9.88 1.40 123.60 133.48 B B B CD NE CZ ARG ARG ARG 57 57 57 N 1 4.68 0.50 120.30 124.98 B B B NE CZ NH1 ARG ARG ARG 57 57 57 N 1 -5.16 0.60 121.00 115.84 B B B CB CG CD1 TYR TYR TYR 59 59 59 N 1 12.04 1.20 123.30 135.34 B B B OE1 CD OE2 GLU GLU GLU 65 65 65 N 1 4.54 0.70 109.00 113.54 B B B CE1 NE2 CD2 HIS HIS HIS 69 69 69 N 1 17.59 2.00 110.90 128.49 B B B CA CB CG2 ILE ILE ILE 72 72 72 N 1 -17.90 2.70 111.60 93.70 B B B CB CA C THR THR THR 80 80 80 N 1 11.70 1.90 110.30 122.00 B B B N CA CB THR THR THR 80 80 80 N 1 10.89 1.40 112.40 123.29 B B B CA CB CG2 THR THR THR 80 80 80 N 1 4.76 0.50 120.30 125.06 B B B NE CZ NH2 ARG ARG ARG 87 87 87 N 1 12.38 1.60 122.70 135.08 B B B O C N LEU LEU THR 90 90 91 Y 1 -10.76 1.70 123.20 112.44 B B B O C N ILE ILE GLY 93 93 94 Y 1 A PRO 79 -69.83 76.98 1 B PRO 79 -73.02 42.21 0.1650000 2.1 10. 10837 86.9 1 2. 2.1 10. 65 1618 39 0 1514 0.021 0.020 0.056 0.035 0.066 0.050 1.608 1.500 2.401 2.000 4.662 3.000 6.494 4.000 0.016 0.020 0.221 0.150 0.197 0.300 0.219 0.300 0.159 0.300 2.9 3.0 19.0 10.0 2.1 10.0 1ODW 10837 1. 0.0690000 1 2.9 86.9 refinement PROLSQ data reduction DENZO Native HIV-1 Proteinase 1 N N 1 N N 2 N N 3 N N 3 N N A GLY 86 A GLY 86 HELX_P A ILE 93 A ILE 93 1 1 8 B GLY 86 B GLY 86 HELX_P B ILE 93 B ILE 93 1 2 8 Hydrolase/Hydrolase Inhibitor PROTEINASE, RETROPEPSIN, RETROVIRUS, HIV, Hydrolase-Hydrolase Inhibitor complex POL_HV1H2 UNP 1 489 P04585 PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF 489 587 1ODW 1 99 P04585 A 1 1 99 489 587 1ODW 1 99 P04585 B 1 1 99 4 3 2 2 4 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel A GLN 18 A GLN 18 A LEU 23 A LEU 23 A LEU 10 A LEU 10 A ILE 15 A ILE 15 A ILE 62 A ILE 62 A ILE 66 A ILE 66 A HIS 69 A HIS 69 A GLY 73 A GLY 73 A TRP 42 A TRP 42 A GLY 49 A GLY 49 A GLY 52 A GLY 52 A TYR 59 A TYR 59 A VAL 75 A VAL 75 A GLY 78 A GLY 78 A THR 96 A THR 96 A ASN 98 A ASN 98 B THR 96 B THR 96 B ASN 98 B ASN 98 B LEU 10 B LEU 10 B LYS 14 B LYS 14 B LEU 19 B LEU 19 B LEU 23 B LEU 23 B VAL 32 B VAL 32 B GLU 34 B GLU 34 B VAL 75 B VAL 75 B GLY 78 B GLY 78 B GLY 52 B GLY 52 B TYR 59 B TYR 59 B LYS 43 B LYS 43 B GLY 49 B GLY 49 B ILE 62 B ILE 62 B GLU 65 B GLU 65 B LYS 70 B LYS 70 B GLY 73 B GLY 73 BINDING SITE FOR RESIDUE 0E8 A 201 A 0E8 201 Software 16 ACTIVE SITE Author 2 A ASP 25 A ASP 25 16 1_555 A GLY 27 A GLY 27 16 1_555 A GLY 48 A GLY 48 16 1_555 A GLY 49 A GLY 49 16 1_555 A ILE 50 A ILE 50 16 1_555 A PRO 81 A PRO 81 16 1_555 A ILE 84 A ILE 84 16 1_555 A HOH 301 D HOH 16 1_555 B ASP 25 B ASP 25 16 1_555 B GLY 27 B GLY 27 16 1_555 B ILE 47 B ILE 47 16 1_555 B GLY 48 B GLY 48 16 1_555 B GLY 49 B GLY 49 16 1_555 B ILE 50 B ILE 50 16 1_555 B PRO 81 B PRO 81 16 1_555 B HOH 401 E HOH 16 1_555 A ASP 25 A ASP 25 2 1_555 B ASP 25 B ASP 25 2 1_555 19 P 21 21 21