0.007330 0.004232 0.000000 0.000000 0.008463 0.000000 0.000000 0.000000 0.014555 0.00000 0.00000 0.00000 Harkiolaki, M. Dodson, E.J. Bernier-Villamor, V. Turkenburg, J.P. Gonzalez-Pacanowska, D. Wilson, K.S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 136.434 136.434 68.705 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK Structure STRUE6 2005 0969-2126 12 41 10.1016/J.STR.2003.11.016 14725764 The Crystal Structure of Trypanosoma Cruzi Dutpase Reveals a Novel Dutp/Dudp Binding Fold 2004 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100.0 1 MIRRORS CCD 2000-03-15 ADSC CCD SI111 SINGLE WAVELENGTH M x-ray 1 0.9688 1.0 ID14-4 ESRF 0.9688 SYNCHROTRON ESRF BEAMLINE ID14-4 32104.342 DEOXYURIDINE TRIPHOSPHATASE 3.6.1.23 1 man polymer 18.015 water 34 nat water DUTPASE no no MNRVQSGFRVPARVLNSLAHLQDGLNIFMDPDWRQIRHVDDWALAITMESAELIDSYPWKWWKNVKAQTDMHNVRIEIAD ILHFSLSGEIQKRTQDEKGADDVALKSLKEMGFFCRPPAHAKSTAASGQRTNGGDGDGDDELLELMFFPLTEVASAVATF RNIIQLASIYRFDLITKGLLLAAQDLDFNLVGYYVAKYTLNQIRQLKGYKEGVYVKVREGVEDNELLHECVQSVSVEDVL NEGTYLKAWEKIACSVFDAFGMPEEERRHAYDWLKSAALDGKG MNRVQSGFRVPARVLNSLAHLQDGLNIFMDPDWRQIRHVDDWALAITMESAELIDSYPWKWWKNVKAQTDMHNVRIEIAD ILHFSLSGEIQKRTQDEKGADDVALKSLKEMGFFCRPPAHAKSTAASGQRTNGGDGDGDDELLELMFFPLTEVASAVATF RNIIQLASIYRFDLITKGLLLAAQDLDFNLVGYYVAKYTLNQIRQLKGYKEGVYVKVREGVEDNELLHECVQSVSVEDVL NEGTYLKAWEKIACSVFDAFGMPEEERRHAYDWLKSAALDGKG A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Y sample 5693 TRYPANOSOMA CRUZI 469008 ESCHERICHIA COLI BL21(DE3) PET-11C 1 2.9 57 ADDITIONAL PHASE INFORMATION PROVIDED THROUGH MERCURYL DERIVATIVE 6.60 15% PEG 2000 MME, 0.1 M LISO4, 50 MM SODIUM CACODYLATE PH 6.6 repository Initial release Version format compliance Version format compliance 1 0 2004-01-22 1 1 2011-05-08 1 2 2011-07-13 THE CRYSTAL STRUCTURE OF TRYPANOSOMA CRUZI DUTPASE IN COMPLEX WITH DUDP PDBE Y PDBE 2003-05-07 REL 1 A O HOH 2001 6.04 HOH water HOH 2001 2 HOH HOH 2001 A HOH 2002 2 HOH HOH 2002 A HOH 2003 2 HOH HOH 2003 A HOH 2004 2 HOH HOH 2004 A HOH 2005 2 HOH HOH 2005 A HOH 2006 2 HOH HOH 2006 A HOH 2007 2 HOH HOH 2007 A HOH 2008 2 HOH HOH 2008 A HOH 2009 2 HOH HOH 2009 A HOH 2010 2 HOH HOH 2010 A HOH 2011 2 HOH HOH 2011 A HOH 2012 2 HOH HOH 2012 A HOH 2013 2 HOH HOH 2013 A HOH 2014 2 HOH HOH 2014 A HOH 2015 2 HOH HOH 2015 A HOH 2016 2 HOH HOH 2016 A HOH 2017 2 HOH HOH 2017 A HOH 2018 2 HOH HOH 2018 A HOH 2019 2 HOH HOH 2019 A HOH 2020 2 HOH HOH 2020 A HOH 2021 2 HOH HOH 2021 A HOH 2022 2 HOH HOH 2022 A HOH 2023 2 HOH HOH 2023 A HOH 2024 2 HOH HOH 2024 A HOH 2025 2 HOH HOH 2025 A HOH 2026 2 HOH HOH 2026 A HOH 2027 2 HOH HOH 2027 A HOH 2028 2 HOH HOH 2028 A HOH 2029 2 HOH HOH 2029 A HOH 2030 2 HOH HOH 2030 A HOH 2031 2 HOH HOH 2031 A HOH 2032 2 HOH HOH 2032 A HOH 2033 2 HOH HOH 2033 A HOH 2034 2 HOH HOH 2034 A n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A n 6 6 A n 7 7 A n 8 8 A ARG 9 n 9 ARG 9 A VAL 10 n 10 VAL 10 A PRO 11 n 11 PRO 11 A ALA 12 n 12 ALA 12 A ARG 13 n 13 ARG 13 A VAL 14 n 14 VAL 14 A LEU 15 n 15 LEU 15 A ASN 16 n 16 ASN 16 A SER 17 n 17 SER 17 A LEU 18 n 18 LEU 18 A ALA 19 n 19 ALA 19 A HIS 20 n 20 HIS 20 A LEU 21 n 21 LEU 21 A GLN 22 n 22 GLN 22 A ASP 23 n 23 ASP 23 A GLY 24 n 24 GLY 24 A LEU 25 n 25 LEU 25 A ASN 26 n 26 ASN 26 A ILE 27 n 27 ILE 27 A PHE 28 n 28 PHE 28 A MET 29 n 29 MET 29 A ASP 30 n 30 ASP 30 A PRO 31 n 31 PRO 31 A ASP 32 n 32 ASP 32 A TRP 33 n 33 TRP 33 A ARG 34 n 34 ARG 34 A GLN 35 n 35 GLN 35 A ILE 36 n 36 ILE 36 A ARG 37 n 37 ARG 37 A HIS 38 n 38 HIS 38 A VAL 39 n 39 VAL 39 A ASP 40 n 40 ASP 40 A ASP 41 n 41 ASP 41 A TRP 42 n 42 TRP 42 A ALA 43 n 43 ALA 43 A LEU 44 n 44 LEU 44 A ALA 45 n 45 ALA 45 A ILE 46 n 46 ILE 46 A THR 47 n 47 THR 47 A MET 48 n 48 MET 48 A GLU 49 n 49 GLU 49 A SER 50 n 50 SER 50 A ALA 51 n 51 ALA 51 A GLU 52 n 52 GLU 52 A LEU 53 n 53 LEU 53 A ILE 54 n 54 ILE 54 A ASP 55 n 55 ASP 55 A SER 56 n 56 SER 56 A TYR 57 n 57 TYR 57 A PRO 58 n 58 PRO 58 A TRP 59 n 59 TRP 59 A LYS 60 n 60 LYS 60 A TRP 61 n 61 TRP 61 A TRP 62 n 62 TRP 62 A LYS 63 n 63 LYS 63 A ASN 64 n 64 ASN 64 A VAL 65 n 65 VAL 65 A LYS 66 n 66 LYS 66 A ALA 67 n 67 ALA 67 A GLN 68 n 68 GLN 68 A THR 69 n 69 THR 69 A ASP 70 n 70 ASP 70 A MET 71 n 71 MET 71 A HIS 72 n 72 HIS 72 A ASN 73 n 73 ASN 73 A VAL 74 n 74 VAL 74 A ARG 75 n 75 ARG 75 A ILE 76 n 76 ILE 76 A GLU 77 n 77 GLU 77 A ILE 78 n 78 ILE 78 A ALA 79 n 79 ALA 79 A ASP 80 n 80 ASP 80 A ILE 81 n 81 ILE 81 A LEU 82 n 82 LEU 82 A HIS 83 n 83 HIS 83 A PHE 84 n 84 PHE 84 A SER 85 n 85 SER 85 A LEU 86 n 86 LEU 86 A SER 87 n 87 SER 87 A GLY 88 n 88 GLY 88 A GLU 89 n 89 GLU 89 A ILE 90 n 90 ILE 90 A GLN 91 n 91 GLN 91 A LYS 92 n 92 LYS 92 A ARG 93 n 93 ARG 93 A THR 94 n 94 THR 94 A GLN 95 n 95 GLN 95 A ASP 96 n 96 ASP 96 A n 97 97 A n 98 98 A n 99 99 A n 100 100 A ASP 101 n 101 ASP 101 A ASP 102 n 102 ASP 102 A VAL 103 n 103 VAL 103 A ALA 104 n 104 ALA 104 A LEU 105 n 105 LEU 105 A LYS 106 n 106 LYS 106 A SER 107 n 107 SER 107 A LEU 108 n 108 LEU 108 A LYS 109 n 109 LYS 109 A GLU 110 n 110 GLU 110 A MET 111 n 111 MET 111 A GLY 112 n 112 GLY 112 A PHE 113 n 113 PHE 113 A PHE 114 n 114 PHE 114 A CYS 115 n 115 CYS 115 A ARG 116 n 116 ARG 116 A PRO 117 n 117 PRO 117 A PRO 118 n 118 PRO 118 A ALA 119 n 119 ALA 119 A n 120 120 A n 121 121 A n 122 122 A n 123 123 A n 124 124 A n 125 125 A n 126 126 A n 127 127 A n 128 128 A n 129 129 A n 130 130 A n 131 131 A n 132 132 A n 133 133 A n 134 134 A n 135 135 A n 136 136 A n 137 137 A n 138 138 A n 139 139 A ASP 140 n 140 ASP 140 A GLU 141 n 141 GLU 141 A LEU 142 n 142 LEU 142 A LEU 143 n 143 LEU 143 A GLU 144 n 144 GLU 144 A LEU 145 n 145 LEU 145 A MET 146 n 146 MET 146 A PHE 147 n 147 PHE 147 A PHE 148 n 148 PHE 148 A PRO 149 n 149 PRO 149 A LEU 150 n 150 LEU 150 A THR 151 n 151 THR 151 A GLU 152 n 152 GLU 152 A VAL 153 n 153 VAL 153 A ALA 154 n 154 ALA 154 A SER 155 n 155 SER 155 A ALA 156 n 156 ALA 156 A VAL 157 n 157 VAL 157 A ALA 158 n 158 ALA 158 A THR 159 n 159 THR 159 A PHE 160 n 160 PHE 160 A ARG 161 n 161 ARG 161 A ASN 162 n 162 ASN 162 A ILE 163 n 163 ILE 163 A ILE 164 n 164 ILE 164 A GLN 165 n 165 GLN 165 A LEU 166 n 166 LEU 166 A ALA 167 n 167 ALA 167 A SER 168 n 168 SER 168 A ILE 169 n 169 ILE 169 A TYR 170 n 170 TYR 170 A ARG 171 n 171 ARG 171 A PHE 172 n 172 PHE 172 A ASP 173 n 173 ASP 173 A LEU 174 n 174 LEU 174 A ILE 175 n 175 ILE 175 A THR 176 n 176 THR 176 A LYS 177 n 177 LYS 177 A GLY 178 n 178 GLY 178 A LEU 179 n 179 LEU 179 A LEU 180 n 180 LEU 180 A LEU 181 n 181 LEU 181 A ALA 182 n 182 ALA 182 A ALA 183 n 183 ALA 183 A GLN 184 n 184 GLN 184 A ASP 185 n 185 ASP 185 A LEU 186 n 186 LEU 186 A ASP 187 n 187 ASP 187 A PHE 188 n 188 PHE 188 A ASN 189 n 189 ASN 189 A LEU 190 n 190 LEU 190 A VAL 191 n 191 VAL 191 A GLY 192 n 192 GLY 192 A TYR 193 n 193 TYR 193 A TYR 194 n 194 TYR 194 A VAL 195 n 195 VAL 195 A ALA 196 n 196 ALA 196 A LYS 197 n 197 LYS 197 A TYR 198 n 198 TYR 198 A THR 199 n 199 THR 199 A LEU 200 n 200 LEU 200 A ASN 201 n 201 ASN 201 A GLN 202 n 202 GLN 202 A ILE 203 n 203 ILE 203 A ARG 204 n 204 ARG 204 A GLN 205 n 205 GLN 205 A LEU 206 n 206 LEU 206 A LYS 207 n 207 LYS 207 A GLY 208 n 208 GLY 208 A TYR 209 n 209 TYR 209 A LYS 210 n 210 LYS 210 A GLU 211 n 211 GLU 211 A GLY 212 n 212 GLY 212 A VAL 213 n 213 VAL 213 A TYR 214 n 214 TYR 214 A VAL 215 n 215 VAL 215 A LYS 216 n 216 LYS 216 A VAL 217 n 217 VAL 217 A ARG 218 n 218 ARG 218 A GLU 219 n 219 GLU 219 A GLY 220 n 220 GLY 220 A VAL 221 n 221 VAL 221 A GLU 222 n 222 GLU 222 A ASP 223 n 223 ASP 223 A ASN 224 n 224 ASN 224 A GLU 225 n 225 GLU 225 A LEU 226 n 226 LEU 226 A LEU 227 n 227 LEU 227 A HIS 228 n 228 HIS 228 A GLU 229 n 229 GLU 229 A CYS 230 n 230 CYS 230 A VAL 231 n 231 VAL 231 A GLN 232 n 232 GLN 232 A SER 233 n 233 SER 233 A VAL 234 n 234 VAL 234 A SER 235 n 235 SER 235 A VAL 236 n 236 VAL 236 A GLU 237 n 237 GLU 237 A ASP 238 n 238 ASP 238 A VAL 239 n 239 VAL 239 A LEU 240 n 240 LEU 240 A ASN 241 n 241 ASN 241 A GLU 242 n 242 GLU 242 A GLY 243 n 243 GLY 243 A THR 244 n 244 THR 244 A TYR 245 n 245 TYR 245 A LEU 246 n 246 LEU 246 A LYS 247 n 247 LYS 247 A ALA 248 n 248 ALA 248 A TRP 249 n 249 TRP 249 A GLU 250 n 250 GLU 250 A LYS 251 n 251 LYS 251 A ILE 252 n 252 ILE 252 A ALA 253 n 253 ALA 253 A CYS 254 n 254 CYS 254 A SER 255 n 255 SER 255 A VAL 256 n 256 VAL 256 A PHE 257 n 257 PHE 257 A ASP 258 n 258 ASP 258 A ALA 259 n 259 ALA 259 A PHE 260 n 260 PHE 260 A GLY 261 n 261 GLY 261 A MET 262 n 262 MET 262 A PRO 263 n 263 PRO 263 A GLU 264 n 264 GLU 264 A GLU 265 n 265 GLU 265 A GLU 266 n 266 GLU 266 A ARG 267 n 267 ARG 267 A ARG 268 n 268 ARG 268 A HIS 269 n 269 HIS 269 A ALA 270 n 270 ALA 270 A TYR 271 n 271 TYR 271 A ASP 272 n 272 ASP 272 A TRP 273 n 273 TRP 273 A LEU 274 n 274 LEU 274 A LYS 275 n 275 LYS 275 A SER 276 n 276 SER 276 A ALA 277 n 277 ALA 277 A ALA 278 n 278 ALA 278 A n 279 279 A n 280 280 A n 281 281 A n 282 282 A n 283 283 A author_and_software_defined_assembly PQS 2 dimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.5000000000 0.8660254038 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 12_555 x,x-y,-z+1/2 crystal symmetry operation 0.0000000000 0.0000000000 34.3525000000 1 A MET 1 A MET 1 1 Y 1 A ASN 2 A ASN 2 1 Y 1 A ARG 3 A ARG 3 1 Y 1 A VAL 4 A VAL 4 1 Y 1 A GLN 5 A GLN 5 1 Y 1 A SER 6 A SER 6 1 Y 1 A GLY 7 A GLY 7 1 Y 1 A PHE 8 A PHE 8 1 Y 1 A GLU 97 A GLU 97 1 Y 1 A LYS 98 A LYS 98 1 Y 1 A GLY 99 A GLY 99 1 Y 1 A ALA 100 A ALA 100 1 Y 1 A HIS 120 A HIS 120 1 Y 1 A ALA 121 A ALA 121 1 Y 1 A LYS 122 A LYS 122 1 Y 1 A SER 123 A SER 123 1 Y 1 A THR 124 A THR 124 1 Y 1 A ALA 125 A ALA 125 1 Y 1 A ALA 126 A ALA 126 1 Y 1 A SER 127 A SER 127 1 Y 1 A GLY 128 A GLY 128 1 Y 1 A GLN 129 A GLN 129 1 Y 1 A ARG 130 A ARG 130 1 Y 1 A THR 131 A THR 131 1 Y 1 A ASN 132 A ASN 132 1 Y 1 A GLY 133 A GLY 133 1 Y 1 A GLY 134 A GLY 134 1 Y 1 A ASP 135 A ASP 135 1 Y 1 A GLY 136 A GLY 136 1 Y 1 A ASP 137 A ASP 137 1 Y 1 A GLY 138 A GLY 138 1 Y 1 A ASP 139 A ASP 139 1 Y 1 A LEU 279 A LEU 279 1 Y 1 A ASP 280 A ASP 280 1 Y 1 A GLY 281 A GLY 281 1 Y 1 A LYS 282 A LYS 282 1 Y 1 A GLY 283 A GLY 283 1 Y 1 5.52 0.90 118.30 123.82 A A A CB CG OD2 ASP ASP ASP 41 41 41 N 1 5.46 0.90 118.30 123.76 A A A CB CG OD2 ASP ASP ASP 140 140 140 N 1 5.71 0.90 118.30 124.01 A A A CB CG OD2 ASP ASP ASP 173 173 173 N 1 6.14 0.90 118.30 124.44 A A A CB CG OD2 ASP ASP ASP 223 223 223 N 1 6.63 0.90 118.30 124.93 A A A CB CG OD2 ASP ASP ASP 238 238 238 N 1 A THR 94 -74.76 27.32 29.70 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.951 0.925 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.263 0.203 0.206 2.40 30.00 724 14099 4.900 96.8 7.775 0.179 RANDOM 1 THROUGHOUT MAD 0.292 0.246 0.80 0.80 1.40 LOW RESOLUTION MAD STRUCTURE MAXIMUM LIKELIHOOD BABINET MODEL WITH MASK 2.40 30.00 34 2037 0 0 2003 0.017 0.021 2047 0.002 0.020 1853 1.542 1.941 2772 0.906 3.000 4299 6.427 5.000 243 0.107 0.200 305 0.006 0.020 2256 0.002 0.020 426 0.213 0.200 452 0.228 0.200 2090 0.096 0.200 1205 0.203 0.200 41 0.176 0.200 11 0.235 0.200 51 0.175 0.200 5 0.856 1.500 1224 1.648 2.000 1969 2.369 3.000 823 3.931 4.500 803 0.3470 0.2730 2.46 61 970 20 2.400 12.000 1OGL 14827 0.000 0.05000 1 32.4000 7.200 97.5 0.41000 2.40 2.44 4.100 1 6.50 88.4 refinement REFMAC 5.1.24 data reduction DENZO data scaling SCALEPACK phasing SOLVE phasing MLPHARE phasing AMoRE DEOXYURIDINE TRIPHOSPHATASE (E.C.3.6.1.23) The crystal structure of native Trypanosoma cruzi dUTPase 1 N N 2 N N A PRO 11 A PRO 11 HELX_P A ASP 30 A ASP 30 1 1 20 A ASP 32 A ASP 32 HELX_P A ARG 37 A ARG 37 1 2 6 A HIS 38 A HIS 38 HELX_P A SER 56 A SER 56 1 3 19 A ASP 70 A ASP 70 HELX_P A THR 94 A THR 94 1 4 25 A ASP 101 A ASP 101 HELX_P A GLY 112 A GLY 112 1 5 12 A GLU 152 A GLU 152 HELX_P A ILE 169 A ILE 169 1 6 18 A ARG 171 A ARG 171 HELX_P A LEU 186 A LEU 186 1 7 16 A ASN 189 A ASN 189 HELX_P A LEU 206 A LEU 206 1 8 18 A LEU 206 A LEU 206 HELX_P A GLU 211 A GLU 211 1 9 6 A GLU 222 A GLU 222 HELX_P A GLN 232 A GLN 232 1 10 11 A THR 244 A THR 244 HELX_P A PHE 260 A PHE 260 1 11 17 A PRO 263 A PRO 263 HELX_P A GLU 266 A GLU 266 5 12 4 A ARG 267 A ARG 267 HELX_P A LYS 275 A LYS 275 1 13 9 HYDROLASE HYDROLASE, DUTPASE, TRYPANOSOMA CRUZI, NATIVE, DIMER A PHE 148 A PHE 148 1 A PRO 149 A PRO 149 2.54 O15923 UNP 1 O15923 1 283 1OGL 1 283 O15923 A 1 1 283 182 P 63 2 2