0.019216 0.000000 0.000000 0.000000 0.016841 0.000000 0.000000 0.000000 0.016215 0.00000 0.00000 0.00000 Davies II, J.F. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 52.040 59.380 61.670 C32 H45 N3 O4 S 567.782 2-[2-HYDROXY-3-(3-HYDROXY-2-METHYL-BENZOYLAMINO)-4-PHENYL SULFANYL-BUTYL]-DECAHYDRO-ISOQUINOLINE-3-CARBOXYLIC ACID TERT-BUTYLAMIDE NELFINAVIR MESYLATE AG1343 non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 S C N 2 S C N 3 N C N 4 N C N 5 N C N 6 N C N 7 N N N 8 S C N 9 N C N 10 N C N 11 N C N 12 N N N 13 N C N 14 N C N 15 N C N 16 N C N 17 N O N 18 N C N 19 R C N 20 R C N 21 N O N 22 N N N 23 N C N 24 N C N 25 N O Y 26 N C Y 27 N C Y 28 N C Y 29 N C Y 30 N C Y 31 N C N 32 N O N 33 N C N 34 N S Y 35 N C Y 36 N C Y 37 N C Y 38 N C Y 39 N C Y 40 N C N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N N N 87 S C N 88 N C N 89 N O N 90 N C N 91 N O N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N N N 100 S C N 101 N C N 102 N O N 103 N C N 104 N C N 105 N C N 106 N N N 107 N C N 108 N N N 109 N N N 110 N O N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N N N 127 S C N 128 N C N 129 N O N 130 N C N 131 N C N 132 N O N 133 N N N 134 N O N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N N N 144 S C N 145 N C N 146 N O N 147 N C N 148 N C N 149 N O N 150 N O N 151 N O N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N N N 160 R C N 161 N C N 162 N O N 163 N C N 164 N S N 165 N O N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N N N 174 S C N 175 N C N 176 N O N 177 N C N 178 N C N 179 N C N 180 N O N 181 N N N 182 N O N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N N N 194 S C N 195 N C N 196 N O N 197 N C N 198 N C N 199 N C N 200 N O N 201 N O N 202 N O N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N N N 213 N C N 214 N C N 215 N O N 216 N O N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N N N 223 S C N 224 N C N 225 N O N 226 N C Y 227 N C Y 228 N N Y 229 N C Y 230 N C Y 231 N N N 232 N O N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N O N 244 N H N 245 N H N 246 N N N 247 S C N 248 N C N 249 N O N 250 S C N 251 N C N 252 N C N 253 N C N 254 N O N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N N N 269 S C N 270 N C N 271 N O N 272 N C N 273 N C N 274 N C N 275 N C N 276 N O N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N C N 296 N C N 297 N C N 298 N N N 299 N O N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N N N 316 S C N 317 N C N 318 N O N 319 N C N 320 N C N 321 N S N 322 N C N 323 N O N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N N N 336 S C N 337 N C N 338 N O N 339 N C Y 340 N C Y 341 N C Y 342 N C Y 343 N C Y 344 N C Y 345 N C N 346 N O N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N N N 359 S C N 360 N C N 361 N O N 362 N C N 363 N C N 364 N C N 365 N O N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N N N 376 S C N 377 N C N 378 N O N 379 N C N 380 N O N 381 N O N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N N N 390 S C N 391 N C N 392 N O N 393 R C N 394 N O N 395 N C N 396 N O N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N N N 407 S C N 408 N C N 409 N O N 410 N C Y 411 N C Y 412 N C Y 413 N C Y 414 N N Y 415 N C Y 416 N C Y 417 N C Y 418 N C Y 419 N C N 420 N O N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N N N 434 S C N 435 N C N 436 N O N 437 N C Y 438 N C Y 439 N C Y 440 N C Y 441 N C Y 442 N C Y 443 N C N 444 N O N 445 N O N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N N N 458 S C N 459 N C N 460 N O N 461 N C N 462 N C N 463 N C N 464 N O N 465 N H N 466 N H N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N doub N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N doub N 61 N sing Y 62 N doub Y 63 N sing Y 64 N sing N 65 N sing Y 66 N doub N 67 N sing Y 68 N sing N 69 N sing Y 70 N doub N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing Y 78 N doub Y 79 N sing Y 80 N sing N 81 N sing Y 82 N doub N 83 N sing Y 84 N sing N 85 N sing Y 86 N doub N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N doub N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N doub N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N doub N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N doub N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N doub N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N doub N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N doub N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N doub N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N doub N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N doub N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N doub N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N doub N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N doub N 224 N sing N 225 N sing N 226 N sing N 227 N sing Y 228 N sing Y 229 N doub Y 230 N doub N 231 N sing Y 232 N sing N 233 N sing Y 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N doub N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N doub N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N doub N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N doub N 332 N sing N 333 N sing N 334 N sing N 335 N sing Y 336 N doub Y 337 N sing Y 338 N sing N 339 N sing Y 340 N doub N 341 N sing Y 342 N doub N 343 N sing Y 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N doub N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N doub N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N doub N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N doub N 401 N sing N 402 N sing N 403 N sing N 404 N sing Y 405 N doub Y 406 N sing Y 407 N sing N 408 N sing Y 409 N doub Y 410 N sing Y 411 N sing N 412 N sing Y 413 N sing Y 414 N doub N 415 N sing Y 416 N doub N 417 N sing Y 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N doub N 429 N sing N 430 N sing N 431 N sing N 432 N sing Y 433 N doub Y 434 N sing Y 435 N sing N 436 N sing Y 437 N doub N 438 N sing Y 439 N doub N 440 N sing Y 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N doub N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing US J.Med.Chem. JMCMAR 0151 0022-2623 40 3979 3985 10.1021/jm9704098 9397180 Viracept (nelfinavir mesylate, AG1343): a potent, orally bioavailable inhibitor of HIV-1 protease. 1997 10.2210/pdb1ohr/pdb pdb_00001ohr 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 x-ray 1 1.0 COMPLEXED WITH VIRACEPT 10803.756 ASPARTYLPROTEASE 2 man polymer 567.782 2-[2-HYDROXY-3-(3-HYDROXY-2-METHYL-BENZOYLAMINO)-4-PHENYL SULFANYL-BUTYL]-DECAHYDRO-ISOQUINOLINE-3-CARBOXYLIC ACID TERT-BUTYLAMIDE 1 syn non-polymer 18.015 water 51 nat water no no PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Lentivirus Escherichia sample 11676 Human immunodeficiency virus 1 562 Escherichia coli 2.21 44.0 chem_comp_atom chem_comp_bond database_2 pdbx_database_status struct_ref_seq_dif struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations Other 1 0 1998-12-09 1 1 2008-03-03 1 2 2011-07-13 1 3 2024-02-14 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y BNL 1997-09-27 REL 1UN 2-[2-HYDROXY-3-(3-HYDROXY-2-METHYL-BENZOYLAMINO)-4-PHENYL SULFANYL-BUTYL]-DECAHYDRO-ISOQUINOLINE-3-CARBOXYLIC ACID TERT-BUTYLAMIDE HOH water 1UN 201 2 1UN 1UN 201 A HOH 303 3 HOH HOH 303 A HOH 304 3 HOH HOH 304 A HOH 307 3 HOH HOH 307 A HOH 311 3 HOH HOH 311 A HOH 312 3 HOH HOH 312 A HOH 313 3 HOH HOH 313 A HOH 315 3 HOH HOH 315 A HOH 321 3 HOH HOH 321 A HOH 325 3 HOH HOH 325 A HOH 326 3 HOH HOH 326 A HOH 330 3 HOH HOH 330 A HOH 334 3 HOH HOH 334 A HOH 335 3 HOH HOH 335 A HOH 336 3 HOH HOH 336 A HOH 406 3 HOH HOH 406 A HOH 407 3 HOH HOH 407 A HOH 410 3 HOH HOH 410 A HOH 411 3 HOH HOH 411 A HOH 414 3 HOH HOH 414 A HOH 421 3 HOH HOH 421 A HOH 423 3 HOH HOH 423 A HOH 425 3 HOH HOH 425 A HOH 426 3 HOH HOH 426 A HOH 432 3 HOH HOH 432 A HOH 433 3 HOH HOH 433 A HOH 507 3 HOH HOH 507 A HOH 508 3 HOH HOH 508 A HOH 510 3 HOH HOH 510 A HOH 515 3 HOH HOH 515 A HOH 301 3 HOH HOH 301 B HOH 302 3 HOH HOH 302 B HOH 305 3 HOH HOH 305 B HOH 308 3 HOH HOH 308 B HOH 309 3 HOH HOH 309 B HOH 314 3 HOH HOH 314 B HOH 318 3 HOH HOH 318 B HOH 319 3 HOH HOH 319 B HOH 329 3 HOH HOH 329 B HOH 338 3 HOH HOH 338 B HOH 343 3 HOH HOH 343 B HOH 403 3 HOH HOH 403 B HOH 408 3 HOH HOH 408 B HOH 413 3 HOH HOH 413 B HOH 415 3 HOH HOH 415 B HOH 416 3 HOH HOH 416 B HOH 422 3 HOH HOH 422 B HOH 424 3 HOH HOH 424 B HOH 431 3 HOH HOH 431 B HOH 506 3 HOH HOH 506 B HOH 513 3 HOH HOH 513 B HOH 514 3 HOH HOH 514 B PRO 1 n 1 PRO 1 A GLN 2 n 2 GLN 2 A ILE 3 n 3 ILE 3 A THR 4 n 4 THR 4 A LEU 5 n 5 LEU 5 A TRP 6 n 6 TRP 6 A GLN 7 n 7 GLN 7 A ARG 8 n 8 ARG 8 A PRO 9 n 9 PRO 9 A LEU 10 n 10 LEU 10 A VAL 11 n 11 VAL 11 A THR 12 n 12 THR 12 A ILE 13 n 13 ILE 13 A LYS 14 n 14 LYS 14 A ILE 15 n 15 ILE 15 A GLY 16 n 16 GLY 16 A GLY 17 n 17 GLY 17 A GLN 18 n 18 GLN 18 A LEU 19 n 19 LEU 19 A LYS 20 n 20 LYS 20 A GLU 21 n 21 GLU 21 A ALA 22 n 22 ALA 22 A LEU 23 n 23 LEU 23 A LEU 24 n 24 LEU 24 A ASP 25 n 25 ASP 25 A THR 26 n 26 THR 26 A GLY 27 n 27 GLY 27 A ALA 28 n 28 ALA 28 A ASP 29 n 29 ASP 29 A ASP 30 n 30 ASP 30 A THR 31 n 31 THR 31 A VAL 32 n 32 VAL 32 A LEU 33 n 33 LEU 33 A GLU 34 n 34 GLU 34 A GLU 35 n 35 GLU 35 A MET 36 n 36 MET 36 A SER 37 n 37 SER 37 A LEU 38 n 38 LEU 38 A PRO 39 n 39 PRO 39 A GLY 40 n 40 GLY 40 A ARG 41 n 41 ARG 41 A TRP 42 n 42 TRP 42 A LYS 43 n 43 LYS 43 A PRO 44 n 44 PRO 44 A LYS 45 n 45 LYS 45 A MET 46 n 46 MET 46 A ILE 47 n 47 ILE 47 A GLY 48 n 48 GLY 48 A GLY 49 n 49 GLY 49 A ILE 50 n 50 ILE 50 A GLY 51 n 51 GLY 51 A GLY 52 n 52 GLY 52 A PHE 53 n 53 PHE 53 A ILE 54 n 54 ILE 54 A LYS 55 n 55 LYS 55 A VAL 56 n 56 VAL 56 A ARG 57 n 57 ARG 57 A GLN 58 n 58 GLN 58 A TYR 59 n 59 TYR 59 A ASP 60 n 60 ASP 60 A GLN 61 n 61 GLN 61 A ILE 62 n 62 ILE 62 A LEU 63 n 63 LEU 63 A ILE 64 n 64 ILE 64 A GLU 65 n 65 GLU 65 A ILE 66 n 66 ILE 66 A CYS 67 n 67 CYS 67 A GLY 68 n 68 GLY 68 A HIS 69 n 69 HIS 69 A LYS 70 n 70 LYS 70 A ALA 71 n 71 ALA 71 A ILE 72 n 72 ILE 72 A GLY 73 n 73 GLY 73 A THR 74 n 74 THR 74 A VAL 75 n 75 VAL 75 A LEU 76 n 76 LEU 76 A VAL 77 n 77 VAL 77 A GLY 78 n 78 GLY 78 A PRO 79 n 79 PRO 79 A THR 80 n 80 THR 80 A PRO 81 n 81 PRO 81 A VAL 82 n 82 VAL 82 A ASN 83 n 83 ASN 83 A ILE 84 n 84 ILE 84 A ILE 85 n 85 ILE 85 A GLY 86 n 86 GLY 86 A ARG 87 n 87 ARG 87 A ASN 88 n 88 ASN 88 A LEU 89 n 89 LEU 89 A LEU 90 n 90 LEU 90 A THR 91 n 91 THR 91 A GLN 92 n 92 GLN 92 A ILE 93 n 93 ILE 93 A GLY 94 n 94 GLY 94 A CYS 95 n 95 CYS 95 A THR 96 n 96 THR 96 A LEU 97 n 97 LEU 97 A ASN 98 n 98 ASN 98 A PHE 99 n 99 PHE 99 A PRO 1 n 1 PRO 1 B GLN 2 n 2 GLN 2 B ILE 3 n 3 ILE 3 B THR 4 n 4 THR 4 B LEU 5 n 5 LEU 5 B TRP 6 n 6 TRP 6 B GLN 7 n 7 GLN 7 B ARG 8 n 8 ARG 8 B PRO 9 n 9 PRO 9 B LEU 10 n 10 LEU 10 B VAL 11 n 11 VAL 11 B THR 12 n 12 THR 12 B ILE 13 n 13 ILE 13 B LYS 14 n 14 LYS 14 B ILE 15 n 15 ILE 15 B GLY 16 n 16 GLY 16 B GLY 17 n 17 GLY 17 B GLN 18 n 18 GLN 18 B LEU 19 n 19 LEU 19 B LYS 20 n 20 LYS 20 B GLU 21 n 21 GLU 21 B ALA 22 n 22 ALA 22 B LEU 23 n 23 LEU 23 B LEU 24 n 24 LEU 24 B ASP 25 n 25 ASP 25 B THR 26 n 26 THR 26 B GLY 27 n 27 GLY 27 B ALA 28 n 28 ALA 28 B ASP 29 n 29 ASP 29 B ASP 30 n 30 ASP 30 B THR 31 n 31 THR 31 B VAL 32 n 32 VAL 32 B LEU 33 n 33 LEU 33 B GLU 34 n 34 GLU 34 B GLU 35 n 35 GLU 35 B MET 36 n 36 MET 36 B SER 37 n 37 SER 37 B LEU 38 n 38 LEU 38 B PRO 39 n 39 PRO 39 B GLY 40 n 40 GLY 40 B ARG 41 n 41 ARG 41 B TRP 42 n 42 TRP 42 B LYS 43 n 43 LYS 43 B PRO 44 n 44 PRO 44 B LYS 45 n 45 LYS 45 B MET 46 n 46 MET 46 B ILE 47 n 47 ILE 47 B GLY 48 n 48 GLY 48 B GLY 49 n 49 GLY 49 B ILE 50 n 50 ILE 50 B GLY 51 n 51 GLY 51 B GLY 52 n 52 GLY 52 B PHE 53 n 53 PHE 53 B ILE 54 n 54 ILE 54 B LYS 55 n 55 LYS 55 B VAL 56 n 56 VAL 56 B ARG 57 n 57 ARG 57 B GLN 58 n 58 GLN 58 B TYR 59 n 59 TYR 59 B ASP 60 n 60 ASP 60 B GLN 61 n 61 GLN 61 B ILE 62 n 62 ILE 62 B LEU 63 n 63 LEU 63 B ILE 64 n 64 ILE 64 B GLU 65 n 65 GLU 65 B ILE 66 n 66 ILE 66 B CYS 67 n 67 CYS 67 B GLY 68 n 68 GLY 68 B HIS 69 n 69 HIS 69 B LYS 70 n 70 LYS 70 B ALA 71 n 71 ALA 71 B ILE 72 n 72 ILE 72 B GLY 73 n 73 GLY 73 B THR 74 n 74 THR 74 B VAL 75 n 75 VAL 75 B LEU 76 n 76 LEU 76 B VAL 77 n 77 VAL 77 B GLY 78 n 78 GLY 78 B PRO 79 n 79 PRO 79 B THR 80 n 80 THR 80 B PRO 81 n 81 PRO 81 B VAL 82 n 82 VAL 82 B ASN 83 n 83 ASN 83 B ILE 84 n 84 ILE 84 B ILE 85 n 85 ILE 85 B GLY 86 n 86 GLY 86 B ARG 87 n 87 ARG 87 B ASN 88 n 88 ASN 88 B LEU 89 n 89 LEU 89 B LEU 90 n 90 LEU 90 B THR 91 n 91 THR 91 B GLN 92 n 92 GLN 92 B ILE 93 n 93 ILE 93 B GLY 94 n 94 GLY 94 B CYS 95 n 95 CYS 95 B THR 96 n 96 THR 96 B LEU 97 n 97 LEU 97 B ASN 98 n 98 ASN 98 B PHE 99 n 99 PHE 99 B author_and_software_defined_assembly PISA 2 dimeric 4770 -32 8840 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O GLN 18 A O GLN 18 A N ILE 15 A N ILE 15 A O LYS 14 A O LYS 14 A N GLU 65 A N GLU 65 A O ILE 62 A O ILE 62 A N GLY 73 A N GLY 73 A O LYS 43 A O LYS 43 A N GLN 58 A N GLN 58 A O ARG 57 A O ARG 57 A N VAL 77 A N VAL 77 B O VAL 11 B O VAL 11 B N ALA 22 B N ALA 22 B O LEU 33 B O LEU 33 B N LEU 76 B N LEU 76 B O VAL 75 B O VAL 75 B N TYR 59 B N TYR 59 B O GLY 52 B O GLY 52 B N GLY 49 B N GLY 49 B O ILE 62 B O ILE 62 B N GLY 73 B N GLY 73 1 A CD GLN 7 A CD GLN 7 1 Y 1 A OE1 GLN 7 A OE1 GLN 7 1 Y 1 A NE2 GLN 7 A NE2 GLN 7 1 Y 1 A CE LYS 14 A CE LYS 14 1 Y 1 A NZ LYS 14 A NZ LYS 14 1 Y 1 A CD GLU 34 A CD GLU 34 1 Y 1 A OE1 GLU 34 A OE1 GLU 34 1 Y 1 A OE2 GLU 34 A OE2 GLU 34 1 Y 1 A CD GLU 35 A CD GLU 35 1 Y 1 A OE1 GLU 35 A OE1 GLU 35 1 Y 1 A OE2 GLU 35 A OE2 GLU 35 1 Y 1 A CG ARG 41 A CG ARG 41 1 Y 1 A CD ARG 41 A CD ARG 41 1 Y 1 A NE ARG 41 A NE ARG 41 1 Y 1 A CZ ARG 41 A CZ ARG 41 1 Y 1 A NH1 ARG 41 A NH1 ARG 41 1 Y 1 A NH2 ARG 41 A NH2 ARG 41 1 Y 1 A CG LYS 43 A CG LYS 43 1 Y 1 A CD LYS 43 A CD LYS 43 1 Y 1 A CE LYS 43 A CE LYS 43 1 Y 1 A NZ LYS 43 A NZ LYS 43 1 Y 1 A CG LYS 45 A CG LYS 45 1 Y 1 A CD LYS 45 A CD LYS 45 1 Y 1 A CE LYS 45 A CE LYS 45 1 Y 1 A NZ LYS 45 A NZ LYS 45 1 Y 1 A CD LYS 55 A CD LYS 55 1 Y 1 A CE LYS 55 A CE LYS 55 1 Y 1 A NZ LYS 55 A NZ LYS 55 1 Y 1 A CG GLN 61 A CG GLN 61 1 Y 1 A CD GLN 61 A CD GLN 61 1 Y 1 A OE1 GLN 61 A OE1 GLN 61 1 Y 1 A NE2 GLN 61 A NE2 GLN 61 1 Y 1 A CE LYS 70 A CE LYS 70 1 Y 1 A NZ LYS 70 A NZ LYS 70 1 Y 1 B CD GLN 7 B CD GLN 7 1 Y 1 B OE1 GLN 7 B OE1 GLN 7 1 Y 1 B NE2 GLN 7 B NE2 GLN 7 1 Y 1 B CG LYS 14 B CG LYS 14 1 Y 1 B CD LYS 14 B CD LYS 14 1 Y 1 B CE LYS 14 B CE LYS 14 1 Y 1 B NZ LYS 14 B NZ LYS 14 1 Y 1 B CG ARG 41 B CG ARG 41 1 Y 1 B CD ARG 41 B CD ARG 41 1 Y 1 B NE ARG 41 B NE ARG 41 1 Y 1 B CZ ARG 41 B CZ ARG 41 1 Y 1 B NH1 ARG 41 B NH1 ARG 41 1 Y 1 B NH2 ARG 41 B NH2 ARG 41 1 Y 1 B CE LYS 55 B CE LYS 55 1 Y 1 B NZ LYS 55 B NZ LYS 55 1 Y 1 B CD GLN 61 B CD GLN 61 1 Y 1 B OE1 GLN 61 B OE1 GLN 61 1 Y 1 B NE2 GLN 61 B NE2 GLN 61 1 Y 1 -3.06 0.50 120.30 117.24 A A A NE CZ NH2 ARG ARG ARG 87 87 87 N 1 -13.12 1.70 113.30 100.18 B B B CA CB CG MET MET MET 46 46 46 N 1 5.56 0.50 120.30 125.86 B B B NE CZ NH1 ARG ARG ARG 87 87 87 N 1 B PRO 79 -80.21 45.53 0.2000000 0.2000000 2.1 6.0 1 2.1 6.0 153 1952 44 0 1755 1 RESTRAINTS 1 X-RAY DIFFRACTION model building X-PLOR refinement X-PLOR phasing X-PLOR VIRACEPT (R) (NELFINAVIR MESYLATE, AG1343): A POTENT ORALLY BIOAVAILABLE INHIBITOR OF HIV-1 PROTEASE 1 N N 1 N N 2 N N 3 N N 3 N N A ARG 87 A ARG 87 HELX_P A LEU 90 A LEU 90 1 1 4 B ARG 87 B ARG 87 HELX_P B LEU 90 B LEU 90 1 2 4 ASPARTYL PROTEASE ASPARTYL PROTEASE, HYDROLASE, HIV-I PROTEASE Q9Q288_9HIV1 UNP 1 1 Q9Q288 PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PVNIIGRNLLTQIGCTLNF 1 99 1OHR 1 99 Q9Q288 A 1 1 99 1 99 1OHR 1 99 Q9Q288 B 1 1 99 1 VAL conflict ILE 3 1OHR A Q9Q288 UNP 3 3 2 VAL conflict ILE 3 1OHR B Q9Q288 UNP 3 3 4 3 2 4 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel A GLN 18 A GLN 18 A LEU 23 A LEU 23 A LEU 10 A LEU 10 A ILE 15 A ILE 15 A ILE 62 A ILE 62 A ILE 66 A ILE 66 A HIS 69 A HIS 69 A GLY 73 A GLY 73 A LYS 43 A LYS 43 A GLY 49 A GLY 49 A GLY 52 A GLY 52 A TYR 59 A TYR 59 A VAL 75 A VAL 75 A GLY 78 A GLY 78 B LEU 10 B LEU 10 B ILE 15 B ILE 15 B GLN 18 B GLN 18 B LEU 23 B LEU 23 B VAL 32 B VAL 32 B GLU 34 B GLU 34 B VAL 75 B VAL 75 B GLY 78 B GLY 78 B GLY 52 B GLY 52 B TYR 59 B TYR 59 B LYS 43 B LYS 43 B GLY 49 B GLY 49 B ILE 62 B ILE 62 B ILE 66 B ILE 66 B HIS 69 B HIS 69 B GLY 73 B GLY 73 BINDING SITE FOR RESIDUE 1UN A 201 A 1UN 201 Software 15 A ASP 25 A ASP 25 15 1_555 A GLY 27 A GLY 27 15 1_555 A ALA 28 A ALA 28 15 1_555 A ASP 29 A ASP 29 15 1_555 A ASP 30 A ASP 30 15 1_555 A GLY 49 A GLY 49 15 1_555 A PRO 81 A PRO 81 15 1_555 A HOH 303 D HOH 15 1_555 A HOH 315 D HOH 15 1_555 B ASP 25 B ASP 25 15 1_555 B GLY 27 B GLY 27 15 1_555 B ILE 47 B ILE 47 15 1_555 B GLY 49 B GLY 49 15 1_555 B ILE 50 B ILE 50 15 1_555 B ILE 84 B ILE 84 15 1_555 19 P 21 21 21