0.006751 0.000000 0.000000 0.000000 0.006751 0.000000 0.000000 0.000000 0.006751 0.00000 0.00000 0.00000 Nagai, K. Evans, P.R. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 96 90.00 90.00 90.00 148.125 148.125 148.125 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK Nature NATUAS 0006 0028-0836 348 515 10.1038/348515A0 2147232 Crystal Structure of the RNA-Binding Domain of the U1 Small Nuclear Ribonucleoprotein A 1990 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 287.0 1 WEISENBERG 1991-03-15 SINGLE WAVELENGTH M x-ray 1 1.0 1.0 Photon Factory 1.0 SYNCHROTRON PHOTON FACTORY 10946.722 U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A RNP DOMAIN RESIDUES 1-95 2 man polymer 18.015 water 92 nat water U1 SNRNP A PROTEIN no no MAVPETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDK PMRIQYAKTDSDIIA MAVPETRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRSMQGFPFYDK PMRIQYAKTDSDIIA A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n HUMAN sample 9606 HOMO SAPIENS 562 ESCHERICHIA COLI 1 3.09 60.23 DATA WERE COLLECTED USING THE WEISSENBERG METHOD. 5.50 2M NA/K PHOSPHATE PH 5.5 repository Initial release Version format compliance Version format compliance 1 0 2003-06-26 1 1 2011-05-08 1 2 2011-07-13 2003-06-12 SPRSDE U1A-UTRRNA, NMR, 31 STRUCTURES HEPATITIS DELTA VIRUS RIBOZYME U1A SPLICEOSOMAL PROTEIN/HEPATITIS DELTA VIRUS GENOMICRIBOZYME COMPLEX THE NMR STRUCTURE OF THE 38KDA U1A PROTEIN -PIE RNA COMPLEX REVEALS THE BASIS OF COOPERATIVITY IN REGULATION OF POLYADENYLATION BY HUMAN U1A PROTEIN RNA-BINDING DOMAIN OF THE U1A SPLICEOSOMAL PROTEINU1A117, NMR, 43 STRUCTURES CRYSTAL STRUCTURE OF A HAIRPIN RIBOZYME IN THECATALYTICALLY-ACTIVE CONFORMATION TRANSITION STATE STABILIZATION BY A CATALYTIC RNA TRANSITION STATE STABILIZATION BY A CATALYTIC RNA TRANSITION STATE STABILIZATION BY A CATALYTIC RNA U1A RNA BINDING DOMAIN AT 1.8 ANGSTROM RESOLUTION REVEALS APRE-ORGANIZED C-TERMINAL HELIX U1A/RIBONUCLEIC ACID COMPLEX RNA BINDING DOMAIN 2 OF HUMAN U1A PROTEIN , NMR,20 STRUCTURES HUMAN U1A/U1A PRE-MRNA 3'UTR COMPLEX (THEORETICAL MODEL) PDBE Y PDBE 2003-06-12 REL HOH water HOH 2001 2 HOH HOH 2001 A HOH 2002 2 HOH HOH 2002 A HOH 2003 2 HOH HOH 2003 A HOH 2004 2 HOH HOH 2004 A HOH 2005 2 HOH HOH 2005 A HOH 2006 2 HOH HOH 2006 A HOH 2007 2 HOH HOH 2007 A HOH 2008 2 HOH HOH 2008 A HOH 2009 2 HOH HOH 2009 A HOH 2010 2 HOH HOH 2010 A HOH 2011 2 HOH HOH 2011 A HOH 2012 2 HOH HOH 2012 A HOH 2013 2 HOH HOH 2013 A HOH 2014 2 HOH HOH 2014 A HOH 2015 2 HOH HOH 2015 A HOH 2016 2 HOH HOH 2016 A HOH 2017 2 HOH HOH 2017 A HOH 2018 2 HOH HOH 2018 A HOH 2019 2 HOH HOH 2019 A HOH 2020 2 HOH HOH 2020 A HOH 2021 2 HOH HOH 2021 A HOH 2022 2 HOH HOH 2022 A HOH 2023 2 HOH HOH 2023 A HOH 2024 2 HOH HOH 2024 A HOH 2025 2 HOH HOH 2025 A HOH 2026 2 HOH HOH 2026 A HOH 2027 2 HOH HOH 2027 A HOH 2028 2 HOH HOH 2028 A HOH 2029 2 HOH HOH 2029 A HOH 2030 2 HOH HOH 2030 A HOH 2031 2 HOH HOH 2031 A HOH 2032 2 HOH HOH 2032 A HOH 2033 2 HOH HOH 2033 A HOH 2034 2 HOH HOH 2034 A HOH 2035 2 HOH HOH 2035 A HOH 2036 2 HOH HOH 2036 A HOH 2037 2 HOH HOH 2037 A HOH 2038 2 HOH HOH 2038 A HOH 2039 2 HOH HOH 2039 A HOH 2040 2 HOH HOH 2040 A HOH 2041 2 HOH HOH 2041 A HOH 2042 2 HOH HOH 2042 A HOH 2043 2 HOH HOH 2043 A HOH 2044 2 HOH HOH 2044 A HOH 2045 2 HOH HOH 2045 A HOH 2046 2 HOH HOH 2046 A HOH 2047 2 HOH HOH 2047 A HOH 2048 2 HOH HOH 2048 A HOH 2049 2 HOH HOH 2049 A HOH 2050 2 HOH HOH 2050 A HOH 2051 2 HOH HOH 2051 A HOH 2052 2 HOH HOH 2052 A HOH 2001 2 HOH HOH 2001 B HOH 2002 2 HOH HOH 2002 B HOH 2003 2 HOH HOH 2003 B HOH 2004 2 HOH HOH 2004 B HOH 2005 2 HOH HOH 2005 B HOH 2006 2 HOH HOH 2006 B HOH 2007 2 HOH HOH 2007 B HOH 2008 2 HOH HOH 2008 B HOH 2009 2 HOH HOH 2009 B HOH 2010 2 HOH HOH 2010 B HOH 2011 2 HOH HOH 2011 B HOH 2012 2 HOH HOH 2012 B HOH 2013 2 HOH HOH 2013 B HOH 2014 2 HOH HOH 2014 B HOH 2015 2 HOH HOH 2015 B HOH 2016 2 HOH HOH 2016 B HOH 2017 2 HOH HOH 2017 B HOH 2018 2 HOH HOH 2018 B HOH 2019 2 HOH HOH 2019 B HOH 2020 2 HOH HOH 2020 B HOH 2021 2 HOH HOH 2021 B HOH 2022 2 HOH HOH 2022 B HOH 2023 2 HOH HOH 2023 B HOH 2024 2 HOH HOH 2024 B HOH 2025 2 HOH HOH 2025 B HOH 2026 2 HOH HOH 2026 B HOH 2027 2 HOH HOH 2027 B HOH 2028 2 HOH HOH 2028 B HOH 2029 2 HOH HOH 2029 B HOH 2030 2 HOH HOH 2030 B HOH 2031 2 HOH HOH 2031 B HOH 2032 2 HOH HOH 2032 B HOH 2033 2 HOH HOH 2033 B HOH 2034 2 HOH HOH 2034 B HOH 2035 2 HOH HOH 2035 B HOH 2036 2 HOH HOH 2036 B HOH 2037 2 HOH HOH 2037 B HOH 2038 2 HOH HOH 2038 B HOH 2039 2 HOH HOH 2039 B HOH 2040 2 HOH HOH 2040 B n 1 1 A n 2 2 A VAL 3 n 3 VAL 3 A PRO 4 n 4 PRO 4 A GLU 5 n 5 GLU 5 A THR 6 n 6 THR 6 A ARG 7 n 7 ARG 7 A PRO 8 n 8 PRO 8 A ASN 9 n 9 ASN 9 A HIS 10 n 10 HIS 10 A THR 11 n 11 THR 11 A ILE 12 n 12 ILE 12 A TYR 13 n 13 TYR 13 A ILE 14 n 14 ILE 14 A ASN 15 n 15 ASN 15 A ASN 16 n 16 ASN 16 A LEU 17 n 17 LEU 17 A ASN 18 n 18 ASN 18 A GLU 19 n 19 GLU 19 A LYS 20 n 20 LYS 20 A ILE 21 n 21 ILE 21 A LYS 22 n 22 LYS 22 A LYS 23 n 23 LYS 23 A ASP 24 n 24 ASP 24 A GLU 25 n 25 GLU 25 A LEU 26 n 26 LEU 26 A LYS 27 n 27 LYS 27 A LYS 28 n 28 LYS 28 A SER 29 n 29 SER 29 A LEU 30 n 30 LEU 30 A TYR 31 n 31 TYR 31 A ALA 32 n 32 ALA 32 A ILE 33 n 33 ILE 33 A PHE 34 n 34 PHE 34 A SER 35 n 35 SER 35 A GLN 36 n 36 GLN 36 A PHE 37 n 37 PHE 37 A GLY 38 n 38 GLY 38 A GLN 39 n 39 GLN 39 A ILE 40 n 40 ILE 40 A LEU 41 n 41 LEU 41 A ASP 42 n 42 ASP 42 A ILE 43 n 43 ILE 43 A LEU 44 n 44 LEU 44 A VAL 45 n 45 VAL 45 A SER 46 n 46 SER 46 A ARG 47 n 47 ARG 47 A SER 48 n 48 SER 48 A LEU 49 n 49 LEU 49 A LYS 50 n 50 LYS 50 A MET 51 n 51 MET 51 A ARG 52 n 52 ARG 52 A GLY 53 n 53 GLY 53 A GLN 54 n 54 GLN 54 A ALA 55 n 55 ALA 55 A PHE 56 n 56 PHE 56 A VAL 57 n 57 VAL 57 A ILE 58 n 58 ILE 58 A PHE 59 n 59 PHE 59 A LYS 60 n 60 LYS 60 A GLU 61 n 61 GLU 61 A VAL 62 n 62 VAL 62 A SER 63 n 63 SER 63 A SER 64 n 64 SER 64 A ALA 65 n 65 ALA 65 A THR 66 n 66 THR 66 A ASN 67 n 67 ASN 67 A ALA 68 n 68 ALA 68 A LEU 69 n 69 LEU 69 A ARG 70 n 70 ARG 70 A SER 71 n 71 SER 71 A MET 72 n 72 MET 72 A GLN 73 n 73 GLN 73 A GLY 74 n 74 GLY 74 A PHE 75 n 75 PHE 75 A PRO 76 n 76 PRO 76 A PHE 77 n 77 PHE 77 A TYR 78 n 78 TYR 78 A ASP 79 n 79 ASP 79 A LYS 80 n 80 LYS 80 A PRO 81 n 81 PRO 81 A MET 82 n 82 MET 82 A ARG 83 n 83 ARG 83 A ILE 84 n 84 ILE 84 A GLN 85 n 85 GLN 85 A TYR 86 n 86 TYR 86 A ALA 87 n 87 ALA 87 A LYS 88 n 88 LYS 88 A THR 89 n 89 THR 89 A ASP 90 n 90 ASP 90 A SER 91 n 91 SER 91 A ASP 92 n 92 ASP 92 A n 93 93 A n 94 94 A n 95 95 A n 1 1 B n 2 2 B n 3 3 B n 4 4 B n 5 5 B THR 6 n 6 THR 6 B ARG 7 n 7 ARG 7 B PRO 8 n 8 PRO 8 B ASN 9 n 9 ASN 9 B HIS 10 n 10 HIS 10 B THR 11 n 11 THR 11 B ILE 12 n 12 ILE 12 B TYR 13 n 13 TYR 13 B ILE 14 n 14 ILE 14 B ASN 15 n 15 ASN 15 B ASN 16 n 16 ASN 16 B LEU 17 n 17 LEU 17 B ASN 18 n 18 ASN 18 B GLU 19 n 19 GLU 19 B LYS 20 n 20 LYS 20 B ILE 21 n 21 ILE 21 B LYS 22 n 22 LYS 22 B LYS 23 n 23 LYS 23 B ASP 24 n 24 ASP 24 B GLU 25 n 25 GLU 25 B LEU 26 n 26 LEU 26 B LYS 27 n 27 LYS 27 B LYS 28 n 28 LYS 28 B SER 29 n 29 SER 29 B LEU 30 n 30 LEU 30 B TYR 31 n 31 TYR 31 B ALA 32 n 32 ALA 32 B ILE 33 n 33 ILE 33 B PHE 34 n 34 PHE 34 B SER 35 n 35 SER 35 B GLN 36 n 36 GLN 36 B PHE 37 n 37 PHE 37 B GLY 38 n 38 GLY 38 B GLN 39 n 39 GLN 39 B ILE 40 n 40 ILE 40 B LEU 41 n 41 LEU 41 B ASP 42 n 42 ASP 42 B ILE 43 n 43 ILE 43 B LEU 44 n 44 LEU 44 B VAL 45 n 45 VAL 45 B SER 46 n 46 SER 46 B ARG 47 n 47 ARG 47 B SER 48 n 48 SER 48 B LEU 49 n 49 LEU 49 B LYS 50 n 50 LYS 50 B MET 51 n 51 MET 51 B ARG 52 n 52 ARG 52 B GLY 53 n 53 GLY 53 B GLN 54 n 54 GLN 54 B ALA 55 n 55 ALA 55 B PHE 56 n 56 PHE 56 B VAL 57 n 57 VAL 57 B ILE 58 n 58 ILE 58 B PHE 59 n 59 PHE 59 B LYS 60 n 60 LYS 60 B GLU 61 n 61 GLU 61 B VAL 62 n 62 VAL 62 B SER 63 n 63 SER 63 B SER 64 n 64 SER 64 B ALA 65 n 65 ALA 65 B THR 66 n 66 THR 66 B ASN 67 n 67 ASN 67 B ALA 68 n 68 ALA 68 B LEU 69 n 69 LEU 69 B ARG 70 n 70 ARG 70 B SER 71 n 71 SER 71 B MET 72 n 72 MET 72 B GLN 73 n 73 GLN 73 B GLY 74 n 74 GLY 74 B PHE 75 n 75 PHE 75 B PRO 76 n 76 PRO 76 B PHE 77 n 77 PHE 77 B TYR 78 n 78 TYR 78 B ASP 79 n 79 ASP 79 B LYS 80 n 80 LYS 80 B PRO 81 n 81 PRO 81 B MET 82 n 82 MET 82 B ARG 83 n 83 ARG 83 B ILE 84 n 84 ILE 84 B GLN 85 n 85 GLN 85 B TYR 86 n 86 TYR 86 B ALA 87 n 87 ALA 87 B LYS 88 n 88 LYS 88 B THR 89 n 89 THR 89 B ASP 90 n 90 ASP 90 B SER 91 n 91 SER 91 B n 92 92 B n 93 93 B n 94 94 B n 95 95 B author_and_software_defined_assembly PQS 1 monomeric author_and_software_defined_assembly PQS 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N LEU 44 A N LEU 44 A O PHE 56 A O PHE 56 A N VAL 57 A N VAL 57 A O ILE 12 A O ILE 12 A N ASN 15 A N ASN 15 A O ARG 83 A O ARG 83 A N PHE 77 A N PHE 77 A O LYS 80 A O LYS 80 B N LEU 44 B N LEU 44 B O PHE 56 B O PHE 56 B N VAL 57 B N VAL 57 B O ILE 12 B O ILE 12 B N ASN 15 B N ASN 15 B O ARG 83 B O ARG 83 B N PHE 77 B N PHE 77 B O LYS 80 B O LYS 80 1 A MET 1 A MET 1 1 Y 1 A ALA 2 A ALA 2 1 Y 1 A ILE 93 A ILE 93 1 Y 1 A ILE 94 A ILE 94 1 Y 1 A ALA 95 A ALA 95 1 Y 1 B MET 1 B MET 1 1 Y 1 B ALA 2 B ALA 2 1 Y 1 B VAL 3 B VAL 3 1 Y 1 B PRO 4 B PRO 4 1 Y 1 B GLU 5 B GLU 5 1 Y 1 B ASP 92 B ASP 92 1 Y 1 B ILE 93 B ILE 93 1 Y 1 B ILE 94 B ILE 94 1 Y 1 B ALA 95 B ALA 95 1 Y 1 A A OD1 O ASN HOH 67 2038 2.10 1 A THR 6 -118.98 66.23 1 A ARG 7 66.63 94.22 1 A ASN 15 -129.15 -168.16 1 A ARG 52 -49.57 -73.55 1 A THR 89 -37.51 97.59 1 B ASN 9 -176.21 144.91 1 B ASN 16 75.59 32.84 1 B SER 48 -77.19 26.11 42.72 0.953 0.918 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. LOOP B48-B52 IS FLEXIBLE AND MAY BE WRONG 0.242 0.192 0.194 2.40 105.41 518 10374 4.800 97.5 7.095 0.162 RANDOM 1 THROUGHOUT MIR 0.283 0.229 0.80 0.80 1.40 MAXIMUM LIKELIHOOD BABINET MODEL WITH MASK 2.40 105.41 92 1529 0 0 1437 0.016 0.022 1464 0.002 0.020 1346 1.491 1.959 1963 0.851 3.000 3149 7.618 5.000 174 0.097 0.200 215 0.006 0.020 1579 0.002 0.020 303 0.212 0.200 254 0.228 0.200 1443 0.088 0.200 924 0.177 0.200 56 0.169 0.200 10 0.247 0.200 53 0.283 0.200 11 1.252 1.500 879 2.367 2.000 1426 2.468 3.000 585 4.472 4.500 537 0.3240 0.2370 2.46 29 721 20 2.200 100.000 1OIA 12666 6.000 0.07400 1 9.400 95.0 refinement REFMAC 5.1.24 data reduction WEIS data scaling SCALA phasing MLPHARE U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A U1A rnp domain 1-95 1 N N 1 N N 2 N N 2 N N A LYS 22 A LYS 22 HELX_P A SER 35 A SER 35 1 1 14 A GLN 36 A GLN 36 HELX_P A GLY 38 A GLY 38 5 2 3 A SER 48 A SER 48 HELX_P A ARG 52 A ARG 52 5 3 5 A GLU 61 A GLU 61 HELX_P A GLN 73 A GLN 73 1 4 13 B LYS 22 B LYS 22 HELX_P B SER 35 B SER 35 1 5 14 B GLN 36 B GLN 36 HELX_P B GLY 38 B GLY 38 5 6 3 B SER 46 B SER 46 HELX_P B LYS 50 B LYS 50 5 7 5 B GLU 61 B GLU 61 HELX_P B GLN 73 B GLN 73 1 8 13 RIBONUCLEOPROTEIN RIBONUCLEOPROTEIN, NUCLEAR PROTEIN, RNA-BINDING given -0.126300 0.131100 -0.983300 0.134800 -0.979800 -0.147900 -0.982800 -0.151200 0.106100 69.04000 69.53000 70.72000 RU1A_HUMAN UNP 1 P09012 1 95 1OIA 1 95 P09012 A 1 1 95 1 95 1OIA 1 95 P09012 B 1 1 95 4 2 4 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A ILE 40 A ILE 40 A LEU 44 A LEU 44 A ALA 55 A ALA 55 A PHE 59 A PHE 59 A THR 11 A THR 11 A ASN 15 A ASN 15 A ARG 83 A ARG 83 A TYR 86 A TYR 86 A PRO 76 A PRO 76 A PHE 77 A PHE 77 A LYS 80 A LYS 80 A PRO 81 A PRO 81 B ILE 40 B ILE 40 B LEU 44 B LEU 44 B GLN 54 B GLN 54 B PHE 59 B PHE 59 B THR 11 B THR 11 B ASN 15 B ASN 15 B ARG 83 B ARG 83 B TYR 86 B TYR 86 B PRO 76 B PRO 76 B PHE 77 B PHE 77 B LYS 80 B LYS 80 B PRO 81 B PRO 81 214 I 41 3 2