0.017929 0.010351 0.000000 0.000000 0.020703 0.000000 0.000000 0.000000 0.005230 0.00000 0.00000 0.00000 Nakai, T. Ishijima, J. Masui, R. Kuramitsu, S. Kamiya, N. RIKEN Structural Genomics/Proteomics Initiative (RSGI) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 18 90.00 90.00 120.00 55.775 55.775 191.190 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 147 N N N 148 S C N 149 N C N 150 N O N 151 S C N 152 N C N 153 N C N 154 N C N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N N N 170 S C N 171 N C N 172 N O N 173 N C N 174 N C N 175 N C N 176 N C N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N N N 192 S C N 193 N C N 194 N O N 195 N C N 196 N C N 197 N C N 198 N C N 199 N N N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N N N 217 S C N 218 N C N 219 N O N 220 N C N 221 N C N 222 N S N 223 N C N 224 N O N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N N N 237 S C N 238 N C N 239 N O N 240 N C Y 241 N C Y 242 N C Y 243 N C Y 244 N C Y 245 N C Y 246 N C N 247 N O N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N N N 260 S C N 261 N C N 262 N O N 263 N C N 264 N C N 265 N C N 266 N O N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N N N 277 S C N 278 N C N 279 N O N 280 N C N 281 N O N 282 N O N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 R C N 295 N O N 296 N C N 297 N O N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N N N 308 S C N 309 N C N 310 N O N 311 N C Y 312 N C Y 313 N C Y 314 N C Y 315 N N Y 316 N C Y 317 N C Y 318 N C Y 319 N C Y 320 N C N 321 N O N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N N N 335 S C N 336 N C N 337 N O N 338 N C Y 339 N C Y 340 N C Y 341 N C Y 342 N C Y 343 N C Y 344 N C N 345 N O N 346 N O N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N N N 359 S C N 360 N C N 361 N O N 362 N C N 363 N C N 364 N C N 365 N O N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing Y 235 N doub Y 236 N sing Y 237 N sing N 238 N sing Y 239 N doub N 240 N sing Y 241 N doub N 242 N sing Y 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N doub N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N doub N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N doub N 300 N sing N 301 N sing N 302 N sing N 303 N sing Y 304 N doub Y 305 N sing Y 306 N sing N 307 N sing Y 308 N doub Y 309 N sing Y 310 N sing N 311 N sing Y 312 N sing Y 313 N doub N 314 N sing Y 315 N doub N 316 N sing Y 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N doub N 328 N sing N 329 N sing N 330 N sing N 331 N sing Y 332 N doub Y 333 N sing Y 334 N sing N 335 N sing Y 336 N doub N 337 N sing Y 338 N doub N 339 N sing Y 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N doub N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing DK Acta Crystallogr.,Sect.D ABCRE6 0766 0907-4449 59 1610 1618 10.1107/S0907444903014975 12925792 Structure of Thermus thermophilus HB8 H-protein of the glycine-cleavage system, resolved by a six-dimensional molecular-replacement method. 2003 10.2210/pdb1onl/pdb pdb_00001onl 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2001-06-22 MARRESEARCH Si111 SINGLE WAVELENGTH M x-ray 1 1.00 1.0 BL44B2 SPring-8 1.00 SYNCHROTRON SPRING-8 BEAMLINE BL44B2 14093.672 glycine cleavage system H protein 3 man polymer 18.015 water 115 nat water no no MDIPKDRFYTKTHEWALPEGDTVLVGITDYAQDALGDVVYVELPEVGRVVEKGEAVAVVESVKTASDIYAPVAGEIVEVN LALEKTPELVNQDPYGEGWIFRLKPRDMGDLDELLDAGGYQEVLESEA MDIPKDRFYTKTHEWALPEGDTVLVGITDYAQDALGDVVYVELPEVGRVVEKGEAVAVVESVKTASDIYAPVAGEIVEVN LALEKTPELVNQDPYGEGWIFRLKPRDMGDLDELLDAGGYQEVLESEA A,B,C ttk003000357.1 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Thermus Escherichia Escherichia coli sample GcvH 274 Thermus thermophilus 469008 Escherichia coli BL21(DE3) BL21(DE3) PLASMID pET11a-gcvH 1 2.00 37.94 VAPOR DIFFUSION, HANGING DROP 4.3 ammonium phosphate, glycerol, pH 4.3, VAPOR DIFFUSION, HANGING DROP, temperature 291K 291 RIKEN Structural Genomics/Proteomics Initiative RSGI chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model repository Initial release Version format compliance Version format compliance Data collection Database references Refinement description 1 0 2003-08-26 1 1 2008-04-29 1 2 2011-07-13 1 3 2023-10-25 _database_2.pdbx_DOI _database_2.pdbx_database_accession Y RCSB Y PDBJ 2003-02-28 REL REL HOH water 1HPC PDB ENTRY 1HPC PDB experimental model WAT 1 2 HOH HOH 129 A WAT 2 2 HOH HOH 130 A WAT 3 2 HOH HOH 131 A WAT 4 2 HOH HOH 132 A WAT 5 2 HOH HOH 133 A WAT 6 2 HOH HOH 134 A WAT 7 2 HOH HOH 135 A WAT 8 2 HOH HOH 136 A WAT 9 2 HOH HOH 137 A WAT 10 2 HOH HOH 138 A WAT 11 2 HOH HOH 139 A WAT 12 2 HOH HOH 140 A WAT 13 2 HOH HOH 141 A WAT 14 2 HOH HOH 142 A WAT 15 2 HOH HOH 143 A WAT 16 2 HOH HOH 144 A WAT 17 2 HOH HOH 145 A WAT 18 2 HOH HOH 146 A WAT 19 2 HOH HOH 147 A WAT 20 2 HOH HOH 148 A WAT 21 2 HOH HOH 149 A WAT 22 2 HOH HOH 150 A WAT 23 2 HOH HOH 151 A WAT 24 2 HOH HOH 152 A WAT 25 2 HOH HOH 153 A WAT 26 2 HOH HOH 154 A WAT 27 2 HOH HOH 155 A WAT 28 2 HOH HOH 156 A WAT 29 2 HOH HOH 157 A WAT 30 2 HOH HOH 158 A WAT 31 2 HOH HOH 159 A WAT 32 2 HOH HOH 160 A WAT 33 2 HOH HOH 161 A WAT 34 2 HOH HOH 162 A WAT 35 2 HOH HOH 163 A WAT 36 2 HOH HOH 164 A WAT 37 2 HOH HOH 165 A WAT 38 2 HOH HOH 166 A WAT 39 2 HOH HOH 167 A WAT 40 2 HOH HOH 168 A WAT 41 2 HOH HOH 169 A WAT 42 2 HOH HOH 170 A WAT 43 2 HOH HOH 171 A WAT 102 2 HOH HOH 172 A WAT 44 2 HOH HOH 129 B WAT 45 2 HOH HOH 130 B WAT 46 2 HOH HOH 131 B WAT 47 2 HOH HOH 132 B WAT 48 2 HOH HOH 133 B WAT 49 2 HOH HOH 134 B WAT 50 2 HOH HOH 135 B WAT 51 2 HOH HOH 136 B WAT 52 2 HOH HOH 137 B WAT 53 2 HOH HOH 138 B WAT 54 2 HOH HOH 139 B WAT 55 2 HOH HOH 140 B WAT 56 2 HOH HOH 141 B WAT 57 2 HOH HOH 142 B WAT 58 2 HOH HOH 143 B WAT 59 2 HOH HOH 144 B WAT 60 2 HOH HOH 145 B WAT 61 2 HOH HOH 146 B WAT 62 2 HOH HOH 147 B WAT 63 2 HOH HOH 148 B WAT 64 2 HOH HOH 149 B WAT 65 2 HOH HOH 150 B WAT 66 2 HOH HOH 151 B WAT 67 2 HOH HOH 152 B WAT 68 2 HOH HOH 153 B WAT 69 2 HOH HOH 154 B WAT 70 2 HOH HOH 155 B WAT 71 2 HOH HOH 156 B WAT 72 2 HOH HOH 157 B WAT 73 2 HOH HOH 158 B WAT 74 2 HOH HOH 159 B WAT 75 2 HOH HOH 160 B WAT 76 2 HOH HOH 161 B WAT 77 2 HOH HOH 162 B WAT 78 2 HOH HOH 163 B WAT 79 2 HOH HOH 164 B WAT 80 2 HOH HOH 129 C WAT 81 2 HOH HOH 130 C WAT 82 2 HOH HOH 131 C WAT 83 2 HOH HOH 132 C WAT 84 2 HOH HOH 133 C WAT 85 2 HOH HOH 134 C WAT 86 2 HOH HOH 135 C WAT 87 2 HOH HOH 136 C WAT 88 2 HOH HOH 137 C WAT 89 2 HOH HOH 138 C WAT 90 2 HOH HOH 139 C WAT 91 2 HOH HOH 140 C WAT 92 2 HOH HOH 141 C WAT 93 2 HOH HOH 142 C WAT 94 2 HOH HOH 143 C WAT 95 2 HOH HOH 144 C WAT 96 2 HOH HOH 145 C WAT 97 2 HOH HOH 146 C WAT 98 2 HOH HOH 147 C WAT 99 2 HOH HOH 148 C WAT 100 2 HOH HOH 149 C WAT 101 2 HOH HOH 150 C WAT 103 2 HOH HOH 151 C WAT 104 2 HOH HOH 152 C WAT 105 2 HOH HOH 153 C WAT 106 2 HOH HOH 154 C WAT 107 2 HOH HOH 155 C WAT 108 2 HOH HOH 156 C WAT 109 2 HOH HOH 157 C WAT 110 2 HOH HOH 158 C WAT 111 2 HOH HOH 159 C WAT 112 2 HOH HOH 160 C WAT 113 2 HOH HOH 161 C WAT 114 2 HOH HOH 162 C WAT 115 2 HOH HOH 163 C n 1 1 A ASP 2 n 2 ASP 2 A ILE 3 n 3 ILE 3 A PRO 4 n 4 PRO 4 A LYS 5 n 5 LYS 5 A ASP 6 n 6 ASP 6 A ARG 7 n 7 ARG 7 A PHE 8 n 8 PHE 8 A TYR 9 n 9 TYR 9 A THR 10 n 10 THR 10 A LYS 11 n 11 LYS 11 A THR 12 n 12 THR 12 A HIS 13 n 13 HIS 13 A GLU 14 n 14 GLU 14 A TRP 15 n 15 TRP 15 A ALA 16 n 16 ALA 16 A LEU 17 n 17 LEU 17 A PRO 18 n 18 PRO 18 A GLU 19 n 19 GLU 19 A GLY 20 n 20 GLY 20 A ASP 21 n 21 ASP 21 A THR 22 n 22 THR 22 A VAL 23 n 23 VAL 23 A LEU 24 n 24 LEU 24 A VAL 25 n 25 VAL 25 A GLY 26 n 26 GLY 26 A ILE 27 n 27 ILE 27 A THR 28 n 28 THR 28 A ASP 29 n 29 ASP 29 A TYR 30 n 30 TYR 30 A ALA 31 n 31 ALA 31 A GLN 32 n 32 GLN 32 A ASP 33 n 33 ASP 33 A ALA 34 n 34 ALA 34 A LEU 35 n 35 LEU 35 A GLY 36 n 36 GLY 36 A ASP 37 n 37 ASP 37 A VAL 38 n 38 VAL 38 A VAL 39 n 39 VAL 39 A TYR 40 n 40 TYR 40 A VAL 41 n 41 VAL 41 A GLU 42 n 42 GLU 42 A LEU 43 n 43 LEU 43 A PRO 44 n 44 PRO 44 A GLU 45 n 45 GLU 45 A VAL 46 n 46 VAL 46 A GLY 47 n 47 GLY 47 A ARG 48 n 48 ARG 48 A VAL 49 n 49 VAL 49 A VAL 50 n 50 VAL 50 A GLU 51 n 51 GLU 51 A LYS 52 n 52 LYS 52 A GLY 53 n 53 GLY 53 A GLU 54 n 54 GLU 54 A ALA 55 n 55 ALA 55 A VAL 56 n 56 VAL 56 A ALA 57 n 57 ALA 57 A VAL 58 n 58 VAL 58 A VAL 59 n 59 VAL 59 A GLU 60 n 60 GLU 60 A SER 61 n 61 SER 61 A VAL 62 n 62 VAL 62 A LYS 63 n 63 LYS 63 A THR 64 n 64 THR 64 A ALA 65 n 65 ALA 65 A SER 66 n 66 SER 66 A ASP 67 n 67 ASP 67 A ILE 68 n 68 ILE 68 A TYR 69 n 69 TYR 69 A ALA 70 n 70 ALA 70 A PRO 71 n 71 PRO 71 A VAL 72 n 72 VAL 72 A ALA 73 n 73 ALA 73 A GLY 74 n 74 GLY 74 A GLU 75 n 75 GLU 75 A ILE 76 n 76 ILE 76 A VAL 77 n 77 VAL 77 A GLU 78 n 78 GLU 78 A VAL 79 n 79 VAL 79 A ASN 80 n 80 ASN 80 A LEU 81 n 81 LEU 81 A ALA 82 n 82 ALA 82 A LEU 83 n 83 LEU 83 A GLU 84 n 84 GLU 84 A LYS 85 n 85 LYS 85 A THR 86 n 86 THR 86 A PRO 87 n 87 PRO 87 A GLU 88 n 88 GLU 88 A LEU 89 n 89 LEU 89 A VAL 90 n 90 VAL 90 A ASN 91 n 91 ASN 91 A GLN 92 n 92 GLN 92 A ASP 93 n 93 ASP 93 A PRO 94 n 94 PRO 94 A TYR 95 n 95 TYR 95 A GLY 96 n 96 GLY 96 A GLU 97 n 97 GLU 97 A GLY 98 n 98 GLY 98 A TRP 99 n 99 TRP 99 A ILE 100 n 100 ILE 100 A PHE 101 n 101 PHE 101 A ARG 102 n 102 ARG 102 A LEU 103 n 103 LEU 103 A LYS 104 n 104 LYS 104 A PRO 105 n 105 PRO 105 A ARG 106 n 106 ARG 106 A ASP 107 n 107 ASP 107 A MET 108 n 108 MET 108 A GLY 109 n 109 GLY 109 A ASP 110 n 110 ASP 110 A LEU 111 n 111 LEU 111 A ASP 112 n 112 ASP 112 A GLU 113 n 113 GLU 113 A LEU 114 n 114 LEU 114 A LEU 115 n 115 LEU 115 A ASP 116 n 116 ASP 116 A ALA 117 n 117 ALA 117 A GLY 118 n 118 GLY 118 A GLY 119 n 119 GLY 119 A TYR 120 n 120 TYR 120 A GLN 121 n 121 GLN 121 A GLU 122 n 122 GLU 122 A VAL 123 n 123 VAL 123 A LEU 124 n 124 LEU 124 A GLU 125 n 125 GLU 125 A SER 126 n 126 SER 126 A GLU 127 n 127 GLU 127 A ALA 128 n 128 ALA 128 A n 1 1 B ASP 2 n 2 ASP 2 B ILE 3 n 3 ILE 3 B PRO 4 n 4 PRO 4 B LYS 5 n 5 LYS 5 B ASP 6 n 6 ASP 6 B ARG 7 n 7 ARG 7 B PHE 8 n 8 PHE 8 B TYR 9 n 9 TYR 9 B THR 10 n 10 THR 10 B LYS 11 n 11 LYS 11 B THR 12 n 12 THR 12 B HIS 13 n 13 HIS 13 B GLU 14 n 14 GLU 14 B TRP 15 n 15 TRP 15 B ALA 16 n 16 ALA 16 B LEU 17 n 17 LEU 17 B PRO 18 n 18 PRO 18 B GLU 19 n 19 GLU 19 B GLY 20 n 20 GLY 20 B ASP 21 n 21 ASP 21 B THR 22 n 22 THR 22 B VAL 23 n 23 VAL 23 B LEU 24 n 24 LEU 24 B VAL 25 n 25 VAL 25 B GLY 26 n 26 GLY 26 B ILE 27 n 27 ILE 27 B THR 28 n 28 THR 28 B ASP 29 n 29 ASP 29 B TYR 30 n 30 TYR 30 B ALA 31 n 31 ALA 31 B GLN 32 n 32 GLN 32 B ASP 33 n 33 ASP 33 B ALA 34 n 34 ALA 34 B LEU 35 n 35 LEU 35 B GLY 36 n 36 GLY 36 B ASP 37 n 37 ASP 37 B VAL 38 n 38 VAL 38 B VAL 39 n 39 VAL 39 B TYR 40 n 40 TYR 40 B VAL 41 n 41 VAL 41 B GLU 42 n 42 GLU 42 B LEU 43 n 43 LEU 43 B PRO 44 n 44 PRO 44 B GLU 45 n 45 GLU 45 B VAL 46 n 46 VAL 46 B GLY 47 n 47 GLY 47 B ARG 48 n 48 ARG 48 B VAL 49 n 49 VAL 49 B VAL 50 n 50 VAL 50 B GLU 51 n 51 GLU 51 B LYS 52 n 52 LYS 52 B GLY 53 n 53 GLY 53 B GLU 54 n 54 GLU 54 B ALA 55 n 55 ALA 55 B VAL 56 n 56 VAL 56 B ALA 57 n 57 ALA 57 B VAL 58 n 58 VAL 58 B VAL 59 n 59 VAL 59 B GLU 60 n 60 GLU 60 B SER 61 n 61 SER 61 B VAL 62 n 62 VAL 62 B LYS 63 n 63 LYS 63 B THR 64 n 64 THR 64 B ALA 65 n 65 ALA 65 B SER 66 n 66 SER 66 B ASP 67 n 67 ASP 67 B ILE 68 n 68 ILE 68 B TYR 69 n 69 TYR 69 B ALA 70 n 70 ALA 70 B PRO 71 n 71 PRO 71 B VAL 72 n 72 VAL 72 B ALA 73 n 73 ALA 73 B GLY 74 n 74 GLY 74 B GLU 75 n 75 GLU 75 B ILE 76 n 76 ILE 76 B VAL 77 n 77 VAL 77 B GLU 78 n 78 GLU 78 B VAL 79 n 79 VAL 79 B ASN 80 n 80 ASN 80 B LEU 81 n 81 LEU 81 B ALA 82 n 82 ALA 82 B LEU 83 n 83 LEU 83 B GLU 84 n 84 GLU 84 B LYS 85 n 85 LYS 85 B THR 86 n 86 THR 86 B PRO 87 n 87 PRO 87 B GLU 88 n 88 GLU 88 B LEU 89 n 89 LEU 89 B VAL 90 n 90 VAL 90 B ASN 91 n 91 ASN 91 B GLN 92 n 92 GLN 92 B ASP 93 n 93 ASP 93 B PRO 94 n 94 PRO 94 B TYR 95 n 95 TYR 95 B GLY 96 n 96 GLY 96 B GLU 97 n 97 GLU 97 B GLY 98 n 98 GLY 98 B TRP 99 n 99 TRP 99 B ILE 100 n 100 ILE 100 B PHE 101 n 101 PHE 101 B ARG 102 n 102 ARG 102 B LEU 103 n 103 LEU 103 B LYS 104 n 104 LYS 104 B PRO 105 n 105 PRO 105 B ARG 106 n 106 ARG 106 B ASP 107 n 107 ASP 107 B MET 108 n 108 MET 108 B GLY 109 n 109 GLY 109 B ASP 110 n 110 ASP 110 B LEU 111 n 111 LEU 111 B ASP 112 n 112 ASP 112 B GLU 113 n 113 GLU 113 B LEU 114 n 114 LEU 114 B LEU 115 n 115 LEU 115 B ASP 116 n 116 ASP 116 B ALA 117 n 117 ALA 117 B GLY 118 n 118 GLY 118 B GLY 119 n 119 GLY 119 B TYR 120 n 120 TYR 120 B GLN 121 n 121 GLN 121 B GLU 122 n 122 GLU 122 B VAL 123 n 123 VAL 123 B LEU 124 n 124 LEU 124 B GLU 125 n 125 GLU 125 B SER 126 n 126 SER 126 B GLU 127 n 127 GLU 127 B ALA 128 n 128 ALA 128 B n 1 1 C ASP 2 n 2 ASP 2 C ILE 3 n 3 ILE 3 C PRO 4 n 4 PRO 4 C LYS 5 n 5 LYS 5 C ASP 6 n 6 ASP 6 C ARG 7 n 7 ARG 7 C PHE 8 n 8 PHE 8 C TYR 9 n 9 TYR 9 C THR 10 n 10 THR 10 C LYS 11 n 11 LYS 11 C THR 12 n 12 THR 12 C HIS 13 n 13 HIS 13 C GLU 14 n 14 GLU 14 C TRP 15 n 15 TRP 15 C ALA 16 n 16 ALA 16 C LEU 17 n 17 LEU 17 C PRO 18 n 18 PRO 18 C GLU 19 n 19 GLU 19 C GLY 20 n 20 GLY 20 C ASP 21 n 21 ASP 21 C THR 22 n 22 THR 22 C VAL 23 n 23 VAL 23 C LEU 24 n 24 LEU 24 C VAL 25 n 25 VAL 25 C GLY 26 n 26 GLY 26 C ILE 27 n 27 ILE 27 C THR 28 n 28 THR 28 C ASP 29 n 29 ASP 29 C TYR 30 n 30 TYR 30 C ALA 31 n 31 ALA 31 C GLN 32 n 32 GLN 32 C ASP 33 n 33 ASP 33 C ALA 34 n 34 ALA 34 C LEU 35 n 35 LEU 35 C GLY 36 n 36 GLY 36 C ASP 37 n 37 ASP 37 C VAL 38 n 38 VAL 38 C VAL 39 n 39 VAL 39 C TYR 40 n 40 TYR 40 C VAL 41 n 41 VAL 41 C GLU 42 n 42 GLU 42 C LEU 43 n 43 LEU 43 C PRO 44 n 44 PRO 44 C GLU 45 n 45 GLU 45 C VAL 46 n 46 VAL 46 C GLY 47 n 47 GLY 47 C ARG 48 n 48 ARG 48 C VAL 49 n 49 VAL 49 C VAL 50 n 50 VAL 50 C GLU 51 n 51 GLU 51 C LYS 52 n 52 LYS 52 C GLY 53 n 53 GLY 53 C GLU 54 n 54 GLU 54 C ALA 55 n 55 ALA 55 C VAL 56 n 56 VAL 56 C ALA 57 n 57 ALA 57 C VAL 58 n 58 VAL 58 C VAL 59 n 59 VAL 59 C GLU 60 n 60 GLU 60 C SER 61 n 61 SER 61 C VAL 62 n 62 VAL 62 C LYS 63 n 63 LYS 63 C THR 64 n 64 THR 64 C ALA 65 n 65 ALA 65 C SER 66 n 66 SER 66 C ASP 67 n 67 ASP 67 C ILE 68 n 68 ILE 68 C TYR 69 n 69 TYR 69 C ALA 70 n 70 ALA 70 C PRO 71 n 71 PRO 71 C VAL 72 n 72 VAL 72 C ALA 73 n 73 ALA 73 C GLY 74 n 74 GLY 74 C GLU 75 n 75 GLU 75 C ILE 76 n 76 ILE 76 C VAL 77 n 77 VAL 77 C GLU 78 n 78 GLU 78 C VAL 79 n 79 VAL 79 C ASN 80 n 80 ASN 80 C LEU 81 n 81 LEU 81 C ALA 82 n 82 ALA 82 C LEU 83 n 83 LEU 83 C GLU 84 n 84 GLU 84 C LYS 85 n 85 LYS 85 C THR 86 n 86 THR 86 C PRO 87 n 87 PRO 87 C GLU 88 n 88 GLU 88 C LEU 89 n 89 LEU 89 C VAL 90 n 90 VAL 90 C ASN 91 n 91 ASN 91 C GLN 92 n 92 GLN 92 C ASP 93 n 93 ASP 93 C PRO 94 n 94 PRO 94 C TYR 95 n 95 TYR 95 C GLY 96 n 96 GLY 96 C GLU 97 n 97 GLU 97 C GLY 98 n 98 GLY 98 C TRP 99 n 99 TRP 99 C ILE 100 n 100 ILE 100 C PHE 101 n 101 PHE 101 C ARG 102 n 102 ARG 102 C LEU 103 n 103 LEU 103 C LYS 104 n 104 LYS 104 C PRO 105 n 105 PRO 105 C ARG 106 n 106 ARG 106 C ASP 107 n 107 ASP 107 C MET 108 n 108 MET 108 C GLY 109 n 109 GLY 109 C ASP 110 n 110 ASP 110 C LEU 111 n 111 LEU 111 C ASP 112 n 112 ASP 112 C GLU 113 n 113 GLU 113 C LEU 114 n 114 LEU 114 C LEU 115 n 115 LEU 115 C ASP 116 n 116 ASP 116 C ALA 117 n 117 ALA 117 C GLY 118 n 118 GLY 118 C GLY 119 n 119 GLY 119 C TYR 120 n 120 TYR 120 C GLN 121 n 121 GLN 121 C GLU 122 n 122 GLU 122 C VAL 123 n 123 VAL 123 C LEU 124 n 124 LEU 124 C GLU 125 n 125 GLU 125 C SER 126 n 126 SER 126 C GLU 127 n 127 GLU 127 C ALA 128 n 128 ALA 128 C author_defined_assembly 1 monomeric author_defined_assembly 1 monomeric author_and_software_defined_assembly PISA 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N PHE 8 A N PHE 8 A O ALA 16 A O ALA 16 A N GLU 19 A N GLU 19 A O THR 22 A O THR 22 A N VAL 23 A N VAL 23 A O LEU 103 A O LEU 103 A O LYS 104 A O LYS 104 A N GLU 75 A N GLU 75 A O GLY 74 A O GLY 74 A N VAL 50 A N VAL 50 A N GLU 42 A N GLU 42 A O VAL 58 A O VAL 58 A N ALA 57 A N ALA 57 A O ILE 68 A O ILE 68 B N PHE 8 B N PHE 8 B O ALA 16 B O ALA 16 B N LEU 17 B N LEU 17 B O LEU 24 B O LEU 24 B N VAL 23 B N VAL 23 B O LEU 103 B O LEU 103 B O LYS 104 B O LYS 104 B N GLU 75 B N GLU 75 B O GLY 74 B O GLY 74 B N VAL 50 B N VAL 50 B N GLU 42 B N GLU 42 B O VAL 58 B O VAL 58 B N ALA 57 B N ALA 57 B O ILE 68 B O ILE 68 C N PHE 8 C N PHE 8 C O ALA 16 C O ALA 16 C N TRP 15 C N TRP 15 C O GLY 26 C O GLY 26 C N VAL 25 C N VAL 25 C O PHE 101 C O PHE 101 C O ARG 102 C O ARG 102 C N GLU 78 C N GLU 78 C O GLY 74 C O GLY 74 C N VAL 50 C N VAL 50 C N TYR 40 C N TYR 40 C O GLU 60 C O GLU 60 C N ALA 57 C N ALA 57 C O ILE 68 C O ILE 68 1 A MET 1 A MET 1 1 Y 1 B MET 1 B MET 1 1 Y 1 C MET 1 C MET 1 1 Y 1 A SER 61 -109.99 -158.38 1 A THR 64 -170.42 -179.91 1 A PRO 71 -38.25 -35.38 1 A ASP 93 -155.00 69.98 1 A ASP 112 -63.83 4.47 1 B GLU 19 -154.11 86.43 1 B ASP 37 -53.12 103.15 1 B ASP 93 -159.40 62.68 1 C THR 64 -146.08 -144.29 1 C ASP 93 -158.56 70.60 1 C TRP 99 -49.60 151.80 1 C ASP 107 -161.91 107.03 PROTEIN_REP.PARAM PROTEIN.TOP WATER_REP.PARAM 27.1 2.70 5.83 0.00 2.70 0.00 -5.40 0.253 0.007 0.186 0.186 2.50 48.30 1155 11689 11137 10.4 95.8 RANDOM 220770.62 0.000000 1 RESTRAINED THROUGHOUT 0.0 MOLECULAR REPLACEMENT PDB ENTRY 1HPC Engh & Huber FLAT MODEL 36.8901 0.357413 0.36 0.25 5.00 0.40 0.27 2.50 48.30 115 3070 0 0 2955 0.006 1.2 24.4 0.74 1.25 1.50 2.04 2.00 1.94 2.00 2.86 2.50 0.316 0.023 0.243 2.66 181 1609 1609 6 10.1 92.5 23.3 2.5 50 1ONL 11773 11730 1.01 0.109 1 13.7 11.5 99.7 0.355 2.50 2.58 2.5 5.4 98.5 data collection HKL-2000 data scaling SCALEPACK phasing EPMR refinement CNS 1.0 data reduction HKL-2000 Crystal structure of Thermus thermophilus HB8 H-protein of the glycine cleavage system 1 N N 1 N N 1 N N 2 N N 2 N N 2 N N A THR 28 A THR 28 HELX_P A GLY 36 A GLY 36 1 1 9 A LEU 81 A LEU 81 HELX_P A THR 86 A THR 86 1 2 6 A GLU 88 A GLU 88 HELX_P A ASP 93 A ASP 93 1 3 6 A ASP 107 A ASP 107 HELX_P A LEU 114 A LEU 114 5 4 8 A ASP 116 A ASP 116 HELX_P A GLU 127 A GLU 127 1 5 12 B THR 28 B THR 28 HELX_P B GLY 36 B GLY 36 1 6 9 B LEU 81 B LEU 81 HELX_P B THR 86 B THR 86 1 7 6 B GLU 88 B GLU 88 HELX_P B ASP 93 B ASP 93 1 8 6 B ASP 107 B ASP 107 HELX_P B LEU 114 B LEU 114 5 9 8 B ASP 116 B ASP 116 HELX_P B SER 126 B SER 126 1 10 11 C THR 28 C THR 28 HELX_P C GLY 36 C GLY 36 1 11 9 C LEU 81 C LEU 81 HELX_P C THR 86 C THR 86 1 12 6 C GLU 88 C GLU 88 HELX_P C ASP 93 C ASP 93 1 13 6 C ASP 107 C ASP 107 HELX_P C LEU 114 C LEU 114 5 14 8 C ASP 116 C ASP 116 HELX_P C GLU 127 C GLU 127 1 15 12 OXIDOREDUCTASE hybrid barrel-sandwich structure, structural genomics, RIKEN Structural Genomics/Proteomics Initiative, RSGI, oxidoreductase P83697_THETH UNP 1 1 P83697 1 128 1ONL 1 128 P83697 A 1 1 128 1 128 1ONL 1 128 P83697 B 1 1 128 1 128 1ONL 1 128 P83697 C 1 1 128 6 3 6 3 6 3 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A PHE 8 A PHE 8 A TYR 9 A TYR 9 A GLU 14 A GLU 14 A GLU 19 A GLU 19 A THR 22 A THR 22 A ILE 27 A ILE 27 A PHE 101 A PHE 101 A PRO 105 A PRO 105 A GLY 74 A GLY 74 A VAL 79 A VAL 79 A VAL 49 A VAL 49 A VAL 50 A VAL 50 A VAL 38 A VAL 38 A GLU 42 A GLU 42 A ALA 55 A ALA 55 A SER 61 A SER 61 A ALA 65 A ALA 65 A TYR 69 A TYR 69 B PHE 8 B PHE 8 B TYR 9 B TYR 9 B GLU 14 B GLU 14 B GLU 19 B GLU 19 B THR 22 B THR 22 B ILE 27 B ILE 27 B PHE 101 B PHE 101 B PRO 105 B PRO 105 B GLY 74 B GLY 74 B VAL 79 B VAL 79 B VAL 49 B VAL 49 B VAL 50 B VAL 50 B VAL 38 B VAL 38 B GLU 42 B GLU 42 B ALA 55 B ALA 55 B SER 61 B SER 61 B ALA 65 B ALA 65 B TYR 69 B TYR 69 C PHE 8 C PHE 8 C TYR 9 C TYR 9 C GLU 14 C GLU 14 C GLU 19 C GLU 19 C THR 22 C THR 22 C ILE 27 C ILE 27 C PHE 101 C PHE 101 C PRO 105 C PRO 105 C GLY 74 C GLY 74 C VAL 79 C VAL 79 C VAL 49 C VAL 49 C VAL 50 C VAL 50 C VAL 38 C VAL 38 C GLU 42 C GLU 42 C ALA 55 C ALA 55 C SER 61 C SER 61 C ALA 65 C ALA 65 C TYR 69 C TYR 69 170 P 65