1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Arumugam, S.
Van Doren, S.R.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Biochemistry
BICHAW
0033
0006-2960
42
7950
7958
10.1021/bi034545s
12834347
Global Orientation of Bound MMP-3 and N-TIMP-1 in Solution via Residual Dipolar Couplings
2003
10.2210/pdb1oo9/pdb
pdb_00001oo9
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
18887.029
Stromelysin-1
3.4.24.17
CATALYTIC DOMAIN
1
man
polymer
14269.307
Metalloproteinase inhibitor 1
N-TERMINAL DOMAIN
1
man
polymer
Matrix metalloproteinase-3, MMP-3, Transin-1, SL-1
TIMP-1, Erythroid potentiating activity, EPA, Tissue inhibitor of metalloproteinases, Fibroblast collagenase inhibitor, Collagenase inhibitor
no
no
FRTFPGIPKWRKTHLTYRIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGN
VLAHAYAPGPGINGDAHFDDDEQWTKDTTGTNLFLVAAHEIGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGI
QSLYGPPP
FRTFPGIPKWRKTHLTYRIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGN
VLAHAYAPGPGINGDAHFDDDEQWTKDTTGTNLFLVAAHEIGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGI
QSLYGPPP
A
polypeptide(L)
no
no
CTCVPPHPQTAFCNSDLVIRAKFVGTPEVNQTTLYQRYEIKMTKMYKGFQALGDAADIRFVYTPAMESVCGYFHRSHNRS
EEFLIAGKLQDGLLHITTCSFVAPWNSLSLAQRRGFTKTYTVGCEE
CTCVPPHPQTAFCNSDLVIRAKFVGTPEVNQTTLYQRYEIKMTKMYKGFQALGDAADIRFVYTPAMESVCGYFHRSHNRS
EEFLIAGKLQDGLLHITTCSFVAPWNSLSLAQRRGFTKTYTVGCEE
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
Escherichia coli
sample
MMP3 OR STMY1
9606
Homo sapiens
469008
Escherichia coli BL21(DE3)
BL21(DE3)
plasmid
pGEMEX-MMP-3(DC)E202Q
human
Homo
Escherichia
Escherichia coli
sample
TIMP1 OR TIMP OR CLGI
9606
Homo sapiens
469008
Escherichia coli BL21(DE3)
BL21(DE3)
plasmid
pET3a-N-TIMP-1
database_2
pdbx_nmr_software
pdbx_struct_assembly
pdbx_struct_oper_list
struct_conn
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2003-07-29
1
1
2008-04-29
1
2
2011-07-13
1
3
2022-02-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_seq_id
Crystal structure of MMP-3 with full length TIMP-1.
RCSB
Y
RCSB
2003-03-03
REL
REL
lowest energy structure
25
1
15N-separated NOESY; HNCA; HNCO; HN(CO)CA
HCCH-TOCSY; HCCH-COSY;
15N-separated NOESY; HNCA; HNCO; HN(CO)CA
15N-separated NOESY
15N-separated NOESY
15N-separated NOESY
coupled 15N-HSQC; coupled 13C-HSQC; Ha-coupled HNCA
20mM Tris-d11; 100 mM NaCl; 15 mM CaCl2; 3uM ZnCl2; 1mM Sodium Azide
6.6
ambient
310
K
20mM Tris-d11; 125mM NaCl; 15 mM CaCl2; 50uM ZnCl2;1mM Sodium Azide
6.7
ambient
307
K
STRUCTURES WERE CALCULATED USING XPLOR-NIH. REFINEMENTS WERE CARRIED OUT FIRST BY RIGID BODY MINIMIZATION (CLORE(2000) PROC.NATL.ACAD.SCI. 97, 9021-9025) FOLLOWED BY RESTRAINED SIMULATED ANNEALING (WANG ET AL. EMBO J. (2000) 19,5635-5649).
THE CRYSTAL STRUCTURE OF THE COMPLEX BY BODE ET AL. (NATURE (1997), 389, 77-81; PDB CODE: 1UEA) HAS
BEEN USED AS A STARTING POINT WITH PROTONS ATTACHED AND TAKING ONLY N-TERMINAL 126 RESIDUES OF TIMP-1.
INTERFACIAL SIDE CHAINS OF THE FOLLOWING RESIDUES WERE ALLOWED TO BE FLEXIBLE: CHAIN A (MMP-3(DC)): 162-169,198-202,
205-206, 211 AND 221-223; CHAIN B (N-TIMP-1): 302-304, 329, 333-335,366-369; A TOTAL OF 49 NOE (46 INTERMOLECULAR
AND 3 INTRAMOLECULAR) 75 NH DIPOLAR COULINGS FOR N-TIMP-1, 19 NH DIPOLAR COUPLINGS AND 8 CaHa DIPOLAR
COUPLINGS FOR MMP-3 WERE USED FOR REFINEMENT. TARGET FUNCTIONS INCLUDE TERMS FOR NOE RESTRAINTS, DIPOLAR
COUPLING RESTRAINTS AND RADIUS OF GYRATION.
ALSO, MODULE ( DOSSET ET AL. J. BIOMOL. NMR, (2001),20,223-231) AND PALES (ZWECKSTETTER AND BAX, J. AM. CHEM. SOC
(2000), 122, 3791-3792) WERE USED FOR EVALUATING THE ORIENTATION AND STRUCTURES.
RIGID BODY MINIMIZATION FOLLOWED BY RESTRAINED SIMULATED ANNEALING
0.8mM MMP-3 U-15N, 13C; 0.8mM N-TIMP-1;
20mM Tris-d11; 100 mM NaCl; 15 mM CaCl2; 3uM ZnCl2;
1mM Sodium Azide; 93% H2O, 7% D2O
93% H2O/7% D2O
0.5mM MMP-3 U-2H, 15N; 0.5mM N-TIMP-1;
20mM Tris-d11; 100 mM NaCl; 15 mM CaCl2; 3uM ZnCl2;
1mM Sodium Azide; 93% H2O, 7% D2O
93% H2O/7% D2O
0.66mM N-TIMP-1 U-15N, 13C; 0.66mM MMP-3(E202Q);
20mM Tris-d11; 125mM NaCl; 15 mM CaCl2; 50uM ZnCl2;
1mM Sodium Azide; 93% H2O; 7% D2O
93% H2O/7% D2O
0.3mM 98% 2H/15N N-TIMP-1; 0.3mM MMP-3 (E202Q);
20mM Tris-d11; 125mM NaCl; 15 mM CaCl2; 50uM ZnCl2;
1mM Sodium Azide; 93% H2O; 7% D2O
93% H2O/7% D2O
0.3mM 98% 2H/15N N-TIMP-1; 0.3mM (15N-IV, 15N, 13C-L)MMP-3(E202Q);
20mM Tris-d11; 125mM NaCl; 15 mM CaCl2; 50uM ZnCl2;
1mM Sodium Azide; 93% H2O; 7% D2O
93% H2O/7% D2O
0.3mM 98% 2H/15N N-TIMP-1; 0.3mM (15N-IV, 15N, 13C-L)MMP-3(E202Q);
20mM Tris-d11; 125mM NaCl; 15 mM CaCl2; 50uM ZnCl2;
1mM Sodium Azide; 93% H2O; 7% D2O
5% PEG(C12E6)/1-hexanol
93% H2O; 7% D2O
5% PEG(C12E6)/1-hexanol
BRUNGER
refinement
XPLOR
NIH
ZWECKSTETTER AND BAX
data analysis
PALES
SGI Irix 6.2
DOSSET ET AL
data analysis
Module
1.0
500
Bruker
DRX
720
Varian
UNITYPLUS
750
Bruker
DRX
600
Varian
INOVA
PHE
83
n
1
PHE
83
A
ARG
84
n
2
ARG
84
A
THR
85
n
3
THR
85
A
PHE
86
n
4
PHE
86
A
PRO
87
n
5
PRO
87
A
GLY
88
n
6
GLY
88
A
ILE
89
n
7
ILE
89
A
PRO
90
n
8
PRO
90
A
LYS
91
n
9
LYS
91
A
TRP
92
n
10
TRP
92
A
ARG
93
n
11
ARG
93
A
LYS
94
n
12
LYS
94
A
THR
95
n
13
THR
95
A
HIS
96
n
14
HIS
96
A
LEU
97
n
15
LEU
97
A
THR
98
n
16
THR
98
A
TYR
99
n
17
TYR
99
A
ARG
100
n
18
ARG
100
A
ILE
101
n
19
ILE
101
A
VAL
102
n
20
VAL
102
A
ASN
103
n
21
ASN
103
A
TYR
104
n
22
TYR
104
A
THR
105
n
23
THR
105
A
PRO
106
n
24
PRO
106
A
ASP
107
n
25
ASP
107
A
LEU
108
n
26
LEU
108
A
PRO
109
n
27
PRO
109
A
LYS
110
n
28
LYS
110
A
ASP
111
n
29
ASP
111
A
ALA
112
n
30
ALA
112
A
VAL
113
n
31
VAL
113
A
ASP
114
n
32
ASP
114
A
SER
115
n
33
SER
115
A
ALA
116
n
34
ALA
116
A
VAL
117
n
35
VAL
117
A
GLU
118
n
36
GLU
118
A
LYS
119
n
37
LYS
119
A
ALA
120
n
38
ALA
120
A
LEU
121
n
39
LEU
121
A
LYS
122
n
40
LYS
122
A
VAL
123
n
41
VAL
123
A
TRP
124
n
42
TRP
124
A
GLU
125
n
43
GLU
125
A
GLU
126
n
44
GLU
126
A
VAL
127
n
45
VAL
127
A
THR
128
n
46
THR
128
A
PRO
129
n
47
PRO
129
A
LEU
130
n
48
LEU
130
A
THR
131
n
49
THR
131
A
PHE
132
n
50
PHE
132
A
SER
133
n
51
SER
133
A
ARG
134
n
52
ARG
134
A
LEU
135
n
53
LEU
135
A
TYR
136
n
54
TYR
136
A
GLU
137
n
55
GLU
137
A
GLY
138
n
56
GLY
138
A
GLU
139
n
57
GLU
139
A
ALA
140
n
58
ALA
140
A
ASP
141
n
59
ASP
141
A
ILE
142
n
60
ILE
142
A
MET
143
n
61
MET
143
A
ILE
144
n
62
ILE
144
A
SER
145
n
63
SER
145
A
PHE
146
n
64
PHE
146
A
ALA
147
n
65
ALA
147
A
VAL
148
n
66
VAL
148
A
ARG
149
n
67
ARG
149
A
GLU
150
n
68
GLU
150
A
HIS
151
n
69
HIS
151
A
GLY
152
n
70
GLY
152
A
ASP
153
n
71
ASP
153
A
PHE
154
n
72
PHE
154
A
TYR
155
n
73
TYR
155
A
PRO
156
n
74
PRO
156
A
PHE
157
n
75
PHE
157
A
ASP
158
n
76
ASP
158
A
GLY
159
n
77
GLY
159
A
PRO
160
n
78
PRO
160
A
GLY
161
n
79
GLY
161
A
ASN
162
n
80
ASN
162
A
VAL
163
n
81
VAL
163
A
LEU
164
n
82
LEU
164
A
ALA
165
n
83
ALA
165
A
HIS
166
n
84
HIS
166
A
ALA
167
n
85
ALA
167
A
TYR
168
n
86
TYR
168
A
ALA
169
n
87
ALA
169
A
PRO
170
n
88
PRO
170
A
GLY
171
n
89
GLY
171
A
PRO
172
n
90
PRO
172
A
GLY
173
n
91
GLY
173
A
ILE
174
n
92
ILE
174
A
ASN
175
n
93
ASN
175
A
GLY
176
n
94
GLY
176
A
ASP
177
n
95
ASP
177
A
ALA
178
n
96
ALA
178
A
HIS
179
n
97
HIS
179
A
PHE
180
n
98
PHE
180
A
ASP
181
n
99
ASP
181
A
ASP
182
n
100
ASP
182
A
ASP
183
n
101
ASP
183
A
GLU
184
n
102
GLU
184
A
GLN
185
n
103
GLN
185
A
TRP
186
n
104
TRP
186
A
THR
187
n
105
THR
187
A
LYS
188
n
106
LYS
188
A
ASP
189
n
107
ASP
189
A
THR
190
n
108
THR
190
A
THR
191
n
109
THR
191
A
GLY
192
n
110
GLY
192
A
THR
193
n
111
THR
193
A
ASN
194
n
112
ASN
194
A
LEU
195
n
113
LEU
195
A
PHE
196
n
114
PHE
196
A
LEU
197
n
115
LEU
197
A
VAL
198
n
116
VAL
198
A
ALA
199
n
117
ALA
199
A
ALA
200
n
118
ALA
200
A
HIS
201
n
119
HIS
201
A
GLU
202
n
120
GLU
202
A
ILE
203
n
121
ILE
203
A
GLY
204
n
122
GLY
204
A
HIS
205
n
123
HIS
205
A
SER
206
n
124
SER
206
A
LEU
207
n
125
LEU
207
A
GLY
208
n
126
GLY
208
A
LEU
209
n
127
LEU
209
A
PHE
210
n
128
PHE
210
A
HIS
211
n
129
HIS
211
A
SER
212
n
130
SER
212
A
ALA
213
n
131
ALA
213
A
ASN
214
n
132
ASN
214
A
THR
215
n
133
THR
215
A
GLU
216
n
134
GLU
216
A
ALA
217
n
135
ALA
217
A
LEU
218
n
136
LEU
218
A
MET
219
n
137
MET
219
A
TYR
220
n
138
TYR
220
A
PRO
221
n
139
PRO
221
A
LEU
222
n
140
LEU
222
A
TYR
223
n
141
TYR
223
A
HIS
224
n
142
HIS
224
A
SER
225
n
143
SER
225
A
LEU
226
n
144
LEU
226
A
THR
227
n
145
THR
227
A
ASP
228
n
146
ASP
228
A
LEU
229
n
147
LEU
229
A
THR
230
n
148
THR
230
A
ARG
231
n
149
ARG
231
A
PHE
232
n
150
PHE
232
A
ARG
233
n
151
ARG
233
A
LEU
234
n
152
LEU
234
A
SER
235
n
153
SER
235
A
GLN
236
n
154
GLN
236
A
ASP
237
n
155
ASP
237
A
ASP
238
n
156
ASP
238
A
ILE
239
n
157
ILE
239
A
ASN
240
n
158
ASN
240
A
GLY
241
n
159
GLY
241
A
ILE
242
n
160
ILE
242
A
GLN
243
n
161
GLN
243
A
SER
244
n
162
SER
244
A
LEU
245
n
163
LEU
245
A
TYR
246
n
164
TYR
246
A
GLY
247
n
165
GLY
247
A
PRO
248
n
166
PRO
248
A
PRO
249
n
167
PRO
249
A
PRO
250
n
168
PRO
250
A
CYS
301
n
1
CYS
301
B
THR
302
n
2
THR
302
B
CYS
303
n
3
CYS
303
B
VAL
304
n
4
VAL
304
B
PRO
305
n
5
PRO
305
B
PRO
306
n
6
PRO
306
B
HIS
307
n
7
HIS
307
B
PRO
308
n
8
PRO
308
B
GLN
309
n
9
GLN
309
B
THR
310
n
10
THR
310
B
ALA
311
n
11
ALA
311
B
PHE
312
n
12
PHE
312
B
CYS
313
n
13
CYS
313
B
ASN
314
n
14
ASN
314
B
SER
315
n
15
SER
315
B
ASP
316
n
16
ASP
316
B
LEU
317
n
17
LEU
317
B
VAL
318
n
18
VAL
318
B
ILE
319
n
19
ILE
319
B
ARG
320
n
20
ARG
320
B
ALA
321
n
21
ALA
321
B
LYS
322
n
22
LYS
322
B
PHE
323
n
23
PHE
323
B
VAL
324
n
24
VAL
324
B
GLY
325
n
25
GLY
325
B
THR
326
n
26
THR
326
B
PRO
327
n
27
PRO
327
B
GLU
328
n
28
GLU
328
B
VAL
329
n
29
VAL
329
B
ASN
330
n
30
ASN
330
B
GLN
331
n
31
GLN
331
B
THR
332
n
32
THR
332
B
THR
333
n
33
THR
333
B
LEU
334
n
34
LEU
334
B
TYR
335
n
35
TYR
335
B
GLN
336
n
36
GLN
336
B
ARG
337
n
37
ARG
337
B
TYR
338
n
38
TYR
338
B
GLU
339
n
39
GLU
339
B
ILE
340
n
40
ILE
340
B
LYS
341
n
41
LYS
341
B
MET
342
n
42
MET
342
B
THR
343
n
43
THR
343
B
LYS
344
n
44
LYS
344
B
MET
345
n
45
MET
345
B
TYR
346
n
46
TYR
346
B
LYS
347
n
47
LYS
347
B
GLY
348
n
48
GLY
348
B
PHE
349
n
49
PHE
349
B
GLN
350
n
50
GLN
350
B
ALA
351
n
51
ALA
351
B
LEU
352
n
52
LEU
352
B
GLY
353
n
53
GLY
353
B
ASP
354
n
54
ASP
354
B
ALA
355
n
55
ALA
355
B
ALA
356
n
56
ALA
356
B
ASP
357
n
57
ASP
357
B
ILE
358
n
58
ILE
358
B
ARG
359
n
59
ARG
359
B
PHE
360
n
60
PHE
360
B
VAL
361
n
61
VAL
361
B
TYR
362
n
62
TYR
362
B
THR
363
n
63
THR
363
B
PRO
364
n
64
PRO
364
B
ALA
365
n
65
ALA
365
B
MET
366
n
66
MET
366
B
GLU
367
n
67
GLU
367
B
SER
368
n
68
SER
368
B
VAL
369
n
69
VAL
369
B
CYS
370
n
70
CYS
370
B
GLY
371
n
71
GLY
371
B
TYR
372
n
72
TYR
372
B
PHE
373
n
73
PHE
373
B
HIS
374
n
74
HIS
374
B
ARG
375
n
75
ARG
375
B
SER
376
n
76
SER
376
B
HIS
377
n
77
HIS
377
B
ASN
378
n
78
ASN
378
B
ARG
379
n
79
ARG
379
B
SER
380
n
80
SER
380
B
GLU
381
n
81
GLU
381
B
GLU
382
n
82
GLU
382
B
PHE
383
n
83
PHE
383
B
LEU
384
n
84
LEU
384
B
ILE
385
n
85
ILE
385
B
ALA
386
n
86
ALA
386
B
GLY
387
n
87
GLY
387
B
LYS
388
n
88
LYS
388
B
LEU
389
n
89
LEU
389
B
GLN
390
n
90
GLN
390
B
ASP
391
n
91
ASP
391
B
GLY
392
n
92
GLY
392
B
LEU
393
n
93
LEU
393
B
LEU
394
n
94
LEU
394
B
HIS
395
n
95
HIS
395
B
ILE
396
n
96
ILE
396
B
THR
397
n
97
THR
397
B
THR
398
n
98
THR
398
B
CYS
399
n
99
CYS
399
B
SER
400
n
100
SER
400
B
PHE
401
n
101
PHE
401
B
VAL
402
n
102
VAL
402
B
ALA
403
n
103
ALA
403
B
PRO
404
n
104
PRO
404
B
TRP
405
n
105
TRP
405
B
ASN
406
n
106
ASN
406
B
SER
407
n
107
SER
407
B
LEU
408
n
108
LEU
408
B
SER
409
n
109
SER
409
B
LEU
410
n
110
LEU
410
B
ALA
411
n
111
ALA
411
B
GLN
412
n
112
GLN
412
B
ARG
413
n
113
ARG
413
B
ARG
414
n
114
ARG
414
B
GLY
415
n
115
GLY
415
B
PHE
416
n
116
PHE
416
B
THR
417
n
117
THR
417
B
LYS
418
n
118
LYS
418
B
THR
419
n
119
THR
419
B
TYR
420
n
120
TYR
420
B
THR
421
n
121
THR
421
B
VAL
422
n
122
VAL
422
B
GLY
423
n
123
GLY
423
B
CYS
424
n
124
CYS
424
B
GLU
425
n
125
GLU
425
B
GLU
426
n
126
GLU
426
B
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
THR
131
A
O
THR
49
A
N
LEU
97
A
N
LEU
15
A
N
ARG
100
A
N
ARG
18
A
O
ILE
142
A
O
ILE
60
A
N
SER
145
A
N
SER
63
A
O
ALA
178
A
O
ALA
96
A
N
ASP
181
A
N
ASP
99
A
O
LEU
164
A
O
LEU
82
A
O
ALA
165
A
O
ALA
83
B
N
THR
302
B
N
THR
2
A
N
THR
187
A
N
THR
105
A
O
THR
193
A
O
THR
111
B
O
ALA
403
B
O
ALA
103
B
N
LEU
384
B
N
LEU
84
B
O
GLN
390
B
O
GLN
90
B
N
LEU
393
B
N
LEU
93
B
N
LEU
394
B
N
LEU
94
B
O
PHE
360
B
O
PHE
60
B
O
THR
363
B
O
THR
63
B
N
GLN
336
B
N
GLN
36
B
N
ARG
337
B
N
ARG
37
B
O
GLU
328
B
O
GLU
28
B
O
GLU
328
B
O
GLU
28
B
N
ARG
337
B
N
ARG
37
B
N
TYR
346
B
N
TYR
46
B
O
VAL
318
B
O
VAL
18
B
O
ALA
321
B
O
ALA
21
B
N
PHE
383
B
N
PHE
83
1
A
B
O
H
PRO
CYS
221
303
1.58
1
A
A
O
HG
ILE
SER
203
206
1.59
1
3.16
0.50
120.30
123.46
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
84
84
84
N
1
3.60
0.50
120.30
123.90
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
93
93
93
N
1
3.79
0.50
120.30
124.09
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
100
100
100
N
1
3.09
0.50
120.30
123.39
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
359
359
359
N
1
6.35
0.50
120.30
126.65
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
413
413
413
N
1
-3.64
0.50
120.30
116.66
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
413
413
413
N
1
A
A
CE1
NE2
HIS
HIS
96
96
-0.074
0.011
1.317
1.243
N
1
A
A
CG
CD2
TRP
TRP
124
124
0.104
0.017
1.432
1.536
N
1
A
A
CE1
NE2
HIS
HIS
151
151
-0.072
0.011
1.317
1.245
N
1
A
A
CE1
NE2
HIS
HIS
166
166
-0.070
0.011
1.317
1.247
N
1
A
A
CE1
NE2
HIS
HIS
179
179
-0.076
0.011
1.317
1.241
N
1
A
A
CE1
NE2
HIS
HIS
201
201
-0.071
0.011
1.317
1.246
N
1
A
A
CE1
NE2
HIS
HIS
205
205
-0.074
0.011
1.317
1.243
N
1
A
A
CE1
NE2
HIS
HIS
211
211
-0.072
0.011
1.317
1.245
N
1
A
A
CE1
NE2
HIS
HIS
224
224
-0.069
0.011
1.317
1.248
N
1
B
B
CE1
NE2
HIS
HIS
307
307
-0.068
0.011
1.317
1.249
N
1
B
B
CE1
NE2
HIS
HIS
374
374
-0.075
0.011
1.317
1.242
N
1
B
B
CE1
NE2
HIS
HIS
377
377
-0.077
0.011
1.317
1.240
N
1
B
B
CE1
NE2
HIS
HIS
395
395
-0.076
0.011
1.317
1.241
N
1
B
B
CG
CD2
TRP
TRP
405
405
0.107
0.017
1.432
1.539
N
1
A
ARG
93
-83.75
36.52
1
A
ARG
149
47.05
-128.57
1
A
HIS
151
-147.85
33.34
1
A
ASP
158
-84.05
30.89
1
A
ASN
162
50.39
-104.54
1
A
PRO
170
-49.27
151.40
1
A
THR
191
-151.06
59.27
1
A
ASN
194
-58.67
105.53
1
A
MET
219
-66.51
4.49
1
A
TYR
223
-57.12
105.66
1
A
SER
225
15.40
105.45
1
A
THR
227
-54.55
-85.91
1
A
LEU
245
-108.91
-62.02
1
B
ASN
330
-74.00
-111.56
1
B
THR
343
-95.06
-77.82
1
B
GLN
350
-89.65
37.51
1
B
ALA
351
-163.37
8.89
1
B
LEU
352
51.84
-106.22
1
B
ASP
354
25.66
-66.65
1
B
ALA
355
-157.51
-6.14
1
B
ALA
356
-168.05
45.80
1
B
CYS
370
91.94
6.81
1
B
ASP
391
65.01
-126.42
1
B
LYS
418
-135.94
-46.09
Orientation in Solution of MMP-3 Catalytic Domain and N-TIMP-1 from Residual Dipolar Couplings
1
N
N
2
N
N
A
PRO
109
A
PRO
27
HELX_P
A
GLU
126
A
GLU
44
1
1
18
A
LEU
195
A
LEU
113
HELX_P
A
LEU
207
A
LEU
125
1
2
13
A
ASP
228
A
ASP
146
HELX_P
A
PHE
232
A
PHE
150
5
3
5
A
SER
235
A
SER
153
HELX_P
A
GLY
247
A
GLY
165
1
4
13
B
HIS
307
B
HIS
7
HELX_P
B
SER
315
B
SER
15
1
5
9
B
MET
366
B
MET
66
HELX_P
B
CYS
370
B
CYS
70
5
6
5
B
ASN
406
B
ASN
106
HELX_P
B
LEU
408
B
LEU
108
5
7
3
B
SER
409
B
SER
109
HELX_P
B
LYS
418
B
LYS
118
1
8
10
B
THR
419
B
THR
119
HELX_P
B
GLU
425
B
GLU
125
1
9
7
disulf
2.057
B
CYS
301
B
SG
CYS
1
1_555
B
CYS
370
B
SG
CYS
70
1_555
disulf
2.062
B
CYS
303
B
SG
CYS
3
1_555
B
CYS
399
B
SG
CYS
99
1_555
disulf
2.031
B
CYS
313
B
SG
CYS
13
1_555
B
CYS
424
B
SG
CYS
124
1_555
HYDROLASE
PROTEIN-PROTEIN COMPLEX, HYDROLASE
MMP3_HUMAN
UNP
1
100
P08254
FRTFPGIPKWRKTHLTYRIVNYTPDLPKDAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMISFAVREHGDFYPFDGPGN
VLAHAYAPGPGINGDAHFDDDEQWTKDTTGTNLFLVAAHEIGHSLGLFHSANTEALMYPLYHSLTDLTRFRLSQDDINGI
QSLYGPPP
TIMP1_HUMAN
UNP
2
24
P01033
CTCVPPHPQTAFCNSDLVIRAKFVGTPEVNQTTLYQRYEIKMTKMYKGFQALGDAADIRFVYTPAMESVCGYFHRSHNRS
EEFLIAGKLQDGLLHITTCSFVAPWNSLSLAQRRGFTKTYTVGCEE
100
267
1OO9
83
250
P08254
A
1
1
168
24
149
1OO9
301
426
P01033
B
2
1
126
6
2
9
parallel
parallel
parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
THR
131
A
THR
49
A
ARG
134
A
ARG
52
A
HIS
96
A
HIS
14
A
ILE
101
A
ILE
19
A
ILE
142
A
ILE
60
A
ALA
147
A
ALA
65
A
ALA
178
A
ALA
96
A
ASP
181
A
ASP
99
A
VAL
163
A
VAL
81
A
ALA
167
A
ALA
85
B
THR
302
B
THR
2
B
CYS
303
B
CYS
3
A
TRP
186
A
TRP
104
A
THR
187
A
THR
105
A
THR
193
A
THR
111
A
ASN
194
A
ASN
112
B
VAL
402
B
VAL
102
B
PRO
404
B
PRO
104
B
PHE
383
B
PHE
83
B
GLN
390
B
GLN
90
B
LEU
393
B
LEU
93
B
HIS
395
B
HIS
95
B
PHE
360
B
PHE
60
B
PRO
364
B
PRO
64
B
TYR
335
B
TYR
35
B
LYS
347
B
LYS
47
B
GLU
328
B
GLU
28
B
VAL
329
B
VAL
29
B
TYR
335
B
TYR
35
B
LYS
347
B
LYS
47
B
LEU
317
B
LEU
17
B
PHE
323
B
PHE
23
B
PHE
383
B
PHE
83
B
GLN
390
B
GLN
90
1
P 1