0.020237
0.000000
0.000000
0.000000
0.013406
0.000000
0.000000
0.000000
0.012133
0.00000
0.00000
0.00000
Zhu, Z.
Teng, M.
Niu, L.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
49.415
74.593
82.419
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C6 H12 O5
164.156
alpha-L-fucopyranose
alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose
L-saccharide, alpha linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C8 H15 N O6
221.208
2-acetamido-2-deoxy-beta-D-glucopyranose
N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE
D-saccharide, beta linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
R
C
N
89
S
C
N
90
R
C
N
91
S
C
N
92
S
C
N
93
N
C
N
94
N
O
N
95
N
O
N
96
N
O
N
97
N
O
N
98
N
O
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
N
N
112
S
C
N
113
N
C
N
114
N
O
N
115
N
C
N
116
N
C
N
117
N
C
N
118
N
O
N
119
N
N
N
120
N
O
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
N
N
132
S
C
N
133
N
C
N
134
N
O
N
135
N
C
N
136
N
C
N
137
N
C
N
138
N
O
N
139
N
O
N
140
N
O
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
N
N
151
N
C
N
152
N
C
N
153
N
O
N
154
N
O
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
N
N
161
S
C
N
162
N
C
N
163
N
O
N
164
N
C
Y
165
N
C
Y
166
N
N
Y
167
N
C
Y
168
N
C
Y
169
N
N
N
170
N
O
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
O
N
182
N
H
N
183
N
H
N
184
N
N
N
185
S
C
N
186
N
C
N
187
N
O
N
188
S
C
N
189
N
C
N
190
N
C
N
191
N
C
N
192
N
O
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
N
N
207
S
C
N
208
N
C
N
209
N
O
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
C
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
N
N
229
S
C
N
230
N
C
N
231
N
O
N
232
N
C
N
233
N
C
N
234
N
C
N
235
N
C
N
236
N
N
N
237
N
O
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
N
N
254
S
C
N
255
N
C
N
256
N
O
N
257
N
C
N
258
N
C
N
259
N
S
N
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
R
C
N
274
R
C
N
275
R
C
N
276
S
C
N
277
R
C
N
278
N
C
N
279
N
C
N
280
N
C
N
281
N
N
N
282
N
O
N
283
N
O
N
284
N
O
N
285
N
O
N
286
N
O
N
287
N
O
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
N
N
304
S
C
N
305
N
C
N
306
N
O
N
307
N
C
Y
308
N
C
Y
309
N
C
Y
310
N
C
Y
311
N
C
Y
312
N
C
Y
313
N
C
N
314
N
O
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
N
N
327
S
C
N
328
N
C
N
329
N
O
N
330
N
C
N
331
N
C
N
332
N
C
N
333
N
O
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
N
N
344
S
C
N
345
N
C
N
346
N
O
N
347
N
C
N
348
N
O
N
349
N
O
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
S
N
358
N
O
N
359
N
O
N
360
N
O
N
361
N
O
N
362
N
N
N
363
S
C
N
364
N
C
N
365
N
O
N
366
R
C
N
367
N
O
N
368
N
C
N
369
N
O
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
N
N
380
S
C
N
381
N
C
N
382
N
O
N
383
N
C
Y
384
N
C
Y
385
N
C
Y
386
N
C
Y
387
N
N
Y
388
N
C
Y
389
N
C
Y
390
N
C
Y
391
N
C
Y
392
N
C
N
393
N
O
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
N
N
407
S
C
N
408
N
C
N
409
N
O
N
410
N
C
Y
411
N
C
Y
412
N
C
Y
413
N
C
Y
414
N
C
Y
415
N
C
Y
416
N
C
N
417
N
O
N
418
N
O
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
N
N
431
S
C
N
432
N
C
N
433
N
O
N
434
N
C
N
435
N
C
N
436
N
C
N
437
N
O
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
doub
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
doub
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
doub
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
doub
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
doub
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
Y
163
N
sing
Y
164
N
doub
Y
165
N
doub
N
166
N
sing
Y
167
N
sing
N
168
N
sing
Y
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
doub
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
doub
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
doub
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
doub
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
doub
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
Y
301
N
doub
Y
302
N
sing
Y
303
N
sing
N
304
N
sing
Y
305
N
doub
N
306
N
sing
Y
307
N
doub
N
308
N
sing
Y
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
doub
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
doub
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
doub
N
344
N
doub
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
doub
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
doub
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
Y
374
N
doub
Y
375
N
sing
Y
376
N
sing
N
377
N
sing
Y
378
N
doub
Y
379
N
sing
Y
380
N
sing
N
381
N
sing
Y
382
N
sing
Y
383
N
doub
N
384
N
sing
Y
385
N
doub
N
386
N
sing
Y
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
doub
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
Y
402
N
doub
Y
403
N
sing
Y
404
N
sing
N
405
N
sing
Y
406
N
doub
N
407
N
sing
Y
408
N
doub
N
409
N
sing
Y
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
doub
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
US
J.BIOL.CHEM.
JBCHA3
0071
0021-9258
280
10524
10529
10.1074/jbc.M412900200
15632114
Crystal Structures and Amidolytic Activities of Two Glycosylated Snake Venom Serine Proteinases
2005
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
59
547
550
10.1107/S0907444902023375
12595722
Purification, N-terminal sequencing, partial characterization, crystallization and preliminary crystallographic analysis of two glycosylated serine proteinases from Agkistrodon acutus venom
2003
10.2210/pdb1op0/pdb
pdb_00001op0
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
298
1
IMAGE PLATE
1999-07-06
MARRESEARCH
GRAPHITE
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
SEALED TUBE
25357.678
Venom serine proteinase
3.4.21.-
1
nat
polymer
570.542
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
1
man
branched
96.063
SULFATE ION
2
syn
non-polymer
18.015
water
142
nat
water
snake venom serine proteinase, AaV-SP-I
no
no
VIGGNECDINEHRFLVAFFNTTGFFCGGTLINPEWVVTAAHCDSTDFQMQLGVHSKKVLNEDEQTRNPKEKFICPNKNNN
EVLDKDIMLIKLDKPISNSKHIAPLSLPSSPPSVGSVCRIMGWGSITPVKETFPDVPYCANINLLDHAVCQAGYPELLAE
YRTLCAGIVQGGKDTCGGDSGGPLICNGQFQGIVSYGAHPCGQGPKPGIYTNVFDYTDWIQRNIAGNTDATCPP
VIGGNECDINEHRFLVAFFNTTGFFCGGTLINPEWVVTAAHCDSTDFQMQLGVHSKKVLNEDEQTRNPKEKFICPNKNNN
EVLDKDIMLIKLDKPISNSKHIAPLSLPSSPPSVGSVCRIMGWGSITPVKETFPDVPYCANINLLDHAVCQAGYPELLAE
YRTLCAGIVQGGKDTCGGDSGGPLICNGQFQGIVSYGAHPCGQGPKPGIYTNVFDYTDWIQRNIAGNTDATCPP
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Chinese moccasin
Deinagkistrodon
sample
36307
Deinagkistrodon acutus
venom gland
1
2.76
55.08
VAPOR DIFFUSION, HANGING DROP
6.3
lithium sulfate, sodium cacodylate, pH 6.3, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
atom_site
chem_comp
entity
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_nonpoly_scheme
pdbx_struct_assembly_gen
struct_asym
struct_conn
struct_ref_seq_dif
struct_site
struct_site_gen
chem_comp
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Non-polymer description
Version format compliance
Atomic model
Data collection
Database references
Derived calculations
Structure summary
Data collection
Database references
Refinement description
Structure summary
1
0
2004-05-25
1
1
2008-04-29
1
2
2011-07-13
2
0
2020-07-29
2
1
2023-10-25
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_entity_id
_atom_site.type_symbol
_chem_comp.name
_chem_comp.type
_pdbx_struct_assembly_gen.asym_id_list
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_role
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_ref_seq_dif.details
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
B
NAG
301
n
B
NAG
1
B
NAG
303
n
B
NAG
2
B
FUC
302
n
B
FUC
3
LFucpa
a-L-fucopyranose
a-L-Fucp
Fuc
DGlcpNAcb
N-acetyl-b-D-glucopyranosamine
b-D-GlcpNAc
GlcNAc
The crystal structure of AaV-SP-II
RCSB
Y
PDBJ
2003-03-04
REL
REL
oligosaccharide
DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-
2
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1221m-1a_1-5]/1-1-2/a4-b1_a6-c1
2
PDB2Glycan
1.1.0
WURCS
[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}[(6+1)][a-L-Fucp]{}}}
2
PDB-CARE
LINUCS
C1
O4
NAG
NAG
2
1
2
O1
HO4
sing
C1
O6
FUC
NAG
3
1
2
O1
HO6
sing
n
n
n
SO4
SULFATE ION
HOH
water
1BQY
PDB ENTRY 1BQY
PDB
experimental model
SO4
901
3
SO4
SO4
901
A
SO4
501
3
SO4
SO4
501
A
HOH
601
4
HOH
HOH
601
A
HOH
602
4
HOH
HOH
602
A
HOH
603
4
HOH
HOH
603
A
HOH
604
4
HOH
HOH
604
A
HOH
605
4
HOH
HOH
605
A
HOH
606
4
HOH
HOH
606
A
HOH
607
4
HOH
HOH
607
A
HOH
608
4
HOH
HOH
608
A
HOH
609
4
HOH
HOH
609
A
HOH
610
4
HOH
HOH
610
A
HOH
611
4
HOH
HOH
611
A
HOH
612
4
HOH
HOH
612
A
HOH
613
4
HOH
HOH
613
A
HOH
614
4
HOH
HOH
614
A
HOH
615
4
HOH
HOH
615
A
HOH
616
4
HOH
HOH
616
A
HOH
617
4
HOH
HOH
617
A
HOH
618
4
HOH
HOH
618
A
HOH
619
4
HOH
HOH
619
A
HOH
620
4
HOH
HOH
620
A
HOH
621
4
HOH
HOH
621
A
HOH
622
4
HOH
HOH
622
A
HOH
623
4
HOH
HOH
623
A
HOH
624
4
HOH
HOH
624
A
HOH
625
4
HOH
HOH
625
A
HOH
626
4
HOH
HOH
626
A
HOH
627
4
HOH
HOH
627
A
HOH
628
4
HOH
HOH
628
A
HOH
629
4
HOH
HOH
629
A
HOH
630
4
HOH
HOH
630
A
HOH
631
4
HOH
HOH
631
A
HOH
632
4
HOH
HOH
632
A
HOH
633
4
HOH
HOH
633
A
HOH
634
4
HOH
HOH
634
A
HOH
635
4
HOH
HOH
635
A
HOH
636
4
HOH
HOH
636
A
HOH
637
4
HOH
HOH
637
A
HOH
638
4
HOH
HOH
638
A
HOH
639
4
HOH
HOH
639
A
HOH
640
4
HOH
HOH
640
A
HOH
641
4
HOH
HOH
641
A
HOH
642
4
HOH
HOH
642
A
HOH
643
4
HOH
HOH
643
A
HOH
644
4
HOH
HOH
644
A
HOH
645
4
HOH
HOH
645
A
HOH
646
4
HOH
HOH
646
A
HOH
647
4
HOH
HOH
647
A
HOH
648
4
HOH
HOH
648
A
HOH
649
4
HOH
HOH
649
A
HOH
650
4
HOH
HOH
650
A
HOH
651
4
HOH
HOH
651
A
HOH
652
4
HOH
HOH
652
A
HOH
653
4
HOH
HOH
653
A
HOH
654
4
HOH
HOH
654
A
HOH
655
4
HOH
HOH
655
A
HOH
656
4
HOH
HOH
656
A
HOH
657
4
HOH
HOH
657
A
HOH
658
4
HOH
HOH
658
A
HOH
659
4
HOH
HOH
659
A
HOH
660
4
HOH
HOH
660
A
HOH
661
4
HOH
HOH
661
A
HOH
662
4
HOH
HOH
662
A
HOH
663
4
HOH
HOH
663
A
HOH
664
4
HOH
HOH
664
A
HOH
665
4
HOH
HOH
665
A
HOH
666
4
HOH
HOH
666
A
HOH
667
4
HOH
HOH
667
A
HOH
668
4
HOH
HOH
668
A
HOH
669
4
HOH
HOH
669
A
HOH
670
4
HOH
HOH
670
A
HOH
671
4
HOH
HOH
671
A
HOH
672
4
HOH
HOH
672
A
HOH
674
4
HOH
HOH
674
A
HOH
675
4
HOH
HOH
675
A
HOH
676
4
HOH
HOH
676
A
HOH
677
4
HOH
HOH
677
A
HOH
678
4
HOH
HOH
678
A
HOH
679
4
HOH
HOH
679
A
HOH
680
4
HOH
HOH
680
A
HOH
681
4
HOH
HOH
681
A
HOH
682
4
HOH
HOH
682
A
HOH
683
4
HOH
HOH
683
A
HOH
684
4
HOH
HOH
684
A
HOH
685
4
HOH
HOH
685
A
HOH
686
4
HOH
HOH
686
A
HOH
687
4
HOH
HOH
687
A
HOH
688
4
HOH
HOH
688
A
HOH
689
4
HOH
HOH
689
A
HOH
690
4
HOH
HOH
690
A
HOH
691
4
HOH
HOH
691
A
HOH
692
4
HOH
HOH
692
A
HOH
693
4
HOH
HOH
693
A
HOH
694
4
HOH
HOH
694
A
HOH
695
4
HOH
HOH
695
A
HOH
696
4
HOH
HOH
696
A
HOH
697
4
HOH
HOH
697
A
HOH
698
4
HOH
HOH
698
A
HOH
699
4
HOH
HOH
699
A
HOH
700
4
HOH
HOH
700
A
HOH
701
4
HOH
HOH
701
A
HOH
702
4
HOH
HOH
702
A
HOH
703
4
HOH
HOH
703
A
HOH
704
4
HOH
HOH
704
A
HOH
705
4
HOH
HOH
705
A
HOH
706
4
HOH
HOH
706
A
HOH
707
4
HOH
HOH
707
A
HOH
708
4
HOH
HOH
708
A
HOH
709
4
HOH
HOH
709
A
HOH
710
4
HOH
HOH
710
A
HOH
711
4
HOH
HOH
711
A
HOH
712
4
HOH
HOH
712
A
HOH
714
4
HOH
HOH
714
A
HOH
715
4
HOH
HOH
715
A
HOH
716
4
HOH
HOH
716
A
HOH
717
4
HOH
HOH
717
A
HOH
718
4
HOH
HOH
718
A
HOH
719
4
HOH
HOH
719
A
HOH
720
4
HOH
HOH
720
A
HOH
721
4
HOH
HOH
721
A
HOH
722
4
HOH
HOH
722
A
HOH
723
4
HOH
HOH
723
A
HOH
725
4
HOH
HOH
725
A
HOH
726
4
HOH
HOH
726
A
HOH
727
4
HOH
HOH
727
A
HOH
728
4
HOH
HOH
728
A
HOH
729
4
HOH
HOH
729
A
HOH
730
4
HOH
HOH
730
A
HOH
732
4
HOH
HOH
732
A
HOH
733
4
HOH
HOH
733
A
HOH
734
4
HOH
HOH
734
A
HOH
735
4
HOH
HOH
735
A
HOH
736
4
HOH
HOH
736
A
HOH
740
4
HOH
HOH
740
A
HOH
741
4
HOH
HOH
741
A
HOH
742
4
HOH
HOH
742
A
HOH
744
4
HOH
HOH
744
A
HOH
745
4
HOH
HOH
745
A
HOH
746
4
HOH
HOH
746
A
HOH
747
4
HOH
HOH
747
A
HOH
748
4
HOH
HOH
748
A
HOH
749
4
HOH
HOH
749
A
HOH
750
4
HOH
HOH
750
A
VAL
16
n
1
VAL
16
A
ILE
17
n
2
ILE
17
A
GLY
18
n
3
GLY
18
A
GLY
19
n
4
GLY
19
A
ASN
20
n
5
ASN
20
A
GLU
21
n
6
GLU
21
A
CYS
22
n
7
CYS
22
A
ASP
23
n
8
ASP
23
A
ILE
24
n
9
ILE
24
A
ASN
25
n
10
ASN
25
A
GLU
26
n
11
GLU
26
A
HIS
27
n
12
HIS
27
A
ARG
28
n
13
ARG
28
A
PHE
29
n
14
PHE
29
A
LEU
30
n
15
LEU
30
A
VAL
31
n
16
VAL
31
A
ALA
32
n
17
ALA
32
A
PHE
33
n
18
PHE
33
A
PHE
34
n
19
PHE
34
A
ASN
35
n
20
ASN
35
A
THR
36
n
21
THR
36
A
THR
38
n
22
THR
38
A
GLY
39
n
23
GLY
39
A
PHE
40
n
24
PHE
40
A
PHE
41
n
25
PHE
41
A
CYS
42
n
26
CYS
42
A
GLY
43
n
27
GLY
43
A
GLY
44
n
28
GLY
44
A
THR
45
n
29
THR
45
A
LEU
46
n
30
LEU
46
A
ILE
47
n
31
ILE
47
A
ASN
48
n
32
ASN
48
A
PRO
49
n
33
PRO
49
A
GLU
50
n
34
GLU
50
A
TRP
51
n
35
TRP
51
A
VAL
52
n
36
VAL
52
A
VAL
53
n
37
VAL
53
A
THR
54
n
38
THR
54
A
ALA
55
n
39
ALA
55
A
ALA
56
n
40
ALA
56
A
HIS
57
n
41
HIS
57
A
CYS
58
n
42
CYS
58
A
ASP
59
n
43
ASP
59
A
SER
60
n
44
SER
60
A
THR
62
n
45
THR
62
A
ASP
63
n
46
ASP
63
A
PHE
64
n
47
PHE
64
A
GLN
65
n
48
GLN
65
A
MET
66
n
49
MET
66
A
GLN
67
n
50
GLN
67
A
LEU
68
n
51
LEU
68
A
GLY
69
n
52
GLY
69
A
VAL
70
n
53
VAL
70
A
HIS
71
n
54
HIS
71
A
SER
72
n
55
SER
72
A
LYS
73
n
56
LYS
73
A
LYS
74
n
57
LYS
74
A
VAL
75
n
58
VAL
75
A
LEU
76
n
59
LEU
76
A
ASN
77
n
60
ASN
77
A
GLU
78
n
61
GLU
78
A
ASP
79
n
62
ASP
79
A
GLU
80
n
63
GLU
80
A
GLN
81
n
64
GLN
81
A
THR
82
n
65
THR
82
A
ARG
83
n
66
ARG
83
A
ASN
84
n
67
ASN
84
A
PRO
85
n
68
PRO
85
A
LYS
86
n
69
LYS
86
A
GLU
87
n
70
GLU
87
A
LYS
88
n
71
LYS
88
A
PHE
89
n
72
PHE
89
A
ILE
90
n
73
ILE
90
A
CYS
91
n
74
CYS
91
A
PRO
92
n
75
PRO
92
A
ASN
93
n
76
ASN
93
A
LYS
94
n
77
LYS
94
A
ASN
95
n
78
ASN
95
A
ASN
95
n
79
A
ASN
95
A
ASN
96
n
80
ASN
96
A
GLU
97
n
81
GLU
97
A
VAL
98
n
82
VAL
98
A
LEU
99
n
83
LEU
99
A
ASP
100
n
84
ASP
100
A
LYS
101
n
85
LYS
101
A
ASP
102
n
86
ASP
102
A
ILE
103
n
87
ILE
103
A
MET
104
n
88
MET
104
A
LEU
105
n
89
LEU
105
A
ILE
106
n
90
ILE
106
A
LYS
107
n
91
LYS
107
A
LEU
108
n
92
LEU
108
A
ASP
109
n
93
ASP
109
A
LYS
110
n
94
LYS
110
A
PRO
111
n
95
PRO
111
A
ILE
112
n
96
ILE
112
A
SER
113
n
97
SER
113
A
ASN
114
n
98
ASN
114
A
SER
115
n
99
SER
115
A
LYS
116
n
100
LYS
116
A
HIS
117
n
101
HIS
117
A
ILE
118
n
102
ILE
118
A
ALA
119
n
103
ALA
119
A
PRO
120
n
104
PRO
120
A
LEU
121
n
105
LEU
121
A
SER
122
n
106
SER
122
A
LEU
123
n
107
LEU
123
A
PRO
124
n
108
PRO
124
A
SER
125
n
109
SER
125
A
SER
127
n
110
SER
127
A
PRO
128
n
111
PRO
128
A
PRO
129
n
112
PRO
129
A
SER
131
n
113
SER
131
A
VAL
132
n
114
VAL
132
A
GLY
133
n
115
GLY
133
A
SER
134
n
116
SER
134
A
VAL
135
n
117
VAL
135
A
CYS
136
n
118
CYS
136
A
ARG
137
n
119
ARG
137
A
ILE
138
n
120
ILE
138
A
MET
139
n
121
MET
139
A
GLY
140
n
122
GLY
140
A
TRP
141
n
123
TRP
141
A
GLY
142
n
124
GLY
142
A
SER
143
n
125
SER
143
A
ILE
144
n
126
ILE
144
A
THR
145
n
127
THR
145
A
PRO
146
n
128
PRO
146
A
VAL
147
n
129
VAL
147
A
LYS
148
n
130
LYS
148
A
GLU
149
n
131
GLU
149
A
THR
150
n
132
THR
150
A
PHE
151
n
133
PHE
151
A
PRO
152
n
134
PRO
152
A
ASP
153
n
135
ASP
153
A
VAL
154
n
136
VAL
154
A
PRO
155
n
137
PRO
155
A
TYR
156
n
138
TYR
156
A
CYS
157
n
139
CYS
157
A
ALA
158
n
140
ALA
158
A
ASN
159
n
141
ASN
159
A
ILE
160
n
142
ILE
160
A
ASN
161
n
143
ASN
161
A
LEU
162
n
144
LEU
162
A
LEU
163
n
145
LEU
163
A
ASP
164
n
146
ASP
164
A
HIS
165
n
147
HIS
165
A
ALA
166
n
148
ALA
166
A
VAL
167
n
149
VAL
167
A
CYS
168
n
150
CYS
168
A
GLN
169
n
151
GLN
169
A
ALA
170
n
152
ALA
170
A
GLY
171
n
153
GLY
171
A
TYR
172
n
154
TYR
172
A
PRO
172
n
155
A
PRO
172
A
GLU
173
n
156
GLU
173
A
LEU
174
n
157
LEU
174
A
LEU
175
n
158
LEU
175
A
ALA
176
n
159
ALA
176
A
GLU
177
n
160
GLU
177
A
TYR
178
n
161
TYR
178
A
ARG
179
n
162
ARG
179
A
THR
180
n
163
THR
180
A
LEU
181
n
164
LEU
181
A
CYS
182
n
165
CYS
182
A
ALA
183
n
166
ALA
183
A
GLY
184
n
167
GLY
184
A
ILE
185
n
168
ILE
185
A
VAL
186
n
169
VAL
186
A
GLN
186
n
170
A
GLN
186
A
GLY
186
n
171
B
GLY
186
A
GLY
187
n
172
GLY
187
A
LYS
188
n
173
LYS
188
A
ASP
189
n
174
ASP
189
A
THR
190
n
175
THR
190
A
CYS
191
n
176
CYS
191
A
GLY
192
n
177
GLY
192
A
GLY
193
n
178
GLY
193
A
ASP
194
n
179
ASP
194
A
SER
195
n
180
SER
195
A
GLY
196
n
181
GLY
196
A
GLY
197
n
182
GLY
197
A
PRO
198
n
183
PRO
198
A
LEU
199
n
184
LEU
199
A
ILE
200
n
185
ILE
200
A
CYS
201
n
186
CYS
201
A
ASN
202
n
187
ASN
202
A
GLY
207
n
188
GLY
207
A
GLN
208
n
189
GLN
208
A
PHE
209
n
190
PHE
209
A
GLN
210
n
191
GLN
210
A
GLY
211
n
192
GLY
211
A
ILE
212
n
193
ILE
212
A
VAL
213
n
194
VAL
213
A
SER
214
n
195
SER
214
A
TYR
215
n
196
TYR
215
A
GLY
216
n
197
GLY
216
A
ALA
217
n
198
ALA
217
A
HIS
218
n
199
HIS
218
A
PRO
219
n
200
PRO
219
A
CYS
220
n
201
CYS
220
A
GLY
221
n
202
GLY
221
A
GLN
221
n
203
A
GLN
221
A
GLY
222
n
204
GLY
222
A
PRO
223
n
205
PRO
223
A
LYS
224
n
206
LYS
224
A
PRO
225
n
207
PRO
225
A
GLY
226
n
208
GLY
226
A
ILE
227
n
209
ILE
227
A
TYR
228
n
210
TYR
228
A
THR
229
n
211
THR
229
A
ASN
230
n
212
ASN
230
A
VAL
231
n
213
VAL
231
A
PHE
232
n
214
PHE
232
A
ASP
233
n
215
ASP
233
A
TYR
234
n
216
TYR
234
A
THR
235
n
217
THR
235
A
ASP
236
n
218
ASP
236
A
TRP
237
n
219
TRP
237
A
ILE
238
n
220
ILE
238
A
GLN
239
n
221
GLN
239
A
ARG
240
n
222
ARG
240
A
ASN
241
n
223
ASN
241
A
ILE
242
n
224
ILE
242
A
ALA
243
n
225
ALA
243
A
GLY
244
n
226
GLY
244
A
ASN
245
n
227
ASN
245
A
THR
245
n
228
A
THR
245
A
ASP
245
n
229
B
ASP
245
A
ALA
245
n
230
C
ALA
245
A
THR
245
n
231
D
THR
245
A
CYS
245
n
232
E
CYS
245
A
PRO
245
n
233
F
PRO
245
A
PRO
245
n
234
G
PRO
245
A
author_defined_assembly
1
monomeric
A
ASN
35
GLYCOSYLATION SITE
A
ASN
20
ASN
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
ASN
20
A
O
ASN
5
A
N
CYS
157
A
N
CYS
139
A
O
ILE
160
A
O
ILE
142
A
N
CYS
136
A
N
CYS
118
A
N
ARG
137
A
N
ARG
119
A
O
ILE
200
A
O
ILE
185
A
O
CYS
201
A
O
CYS
186
A
N
GLN
208
A
N
GLN
189
A
O
TYR
215
A
O
TYR
196
A
N
ILE
227
A
N
ILE
209
A
O
TYR
228
A
O
TYR
210
A
N
LEU
181
A
N
LEU
164
A
O
GLY
184
A
O
GLY
167
A
N
ASN
161
A
N
ASN
143
A
N
ARG
83
A
N
ARG
66
A
O
MET
66
A
O
MET
49
A
N
GLN
67
A
N
GLN
50
A
O
ALA
32
A
O
ALA
17
A
N
ASN
35
A
N
ASN
20
A
O
GLY
39
A
O
GLY
23
A
N
ILE
47
A
N
ILE
31
A
O
TRP
51
A
O
TRP
35
A
O
THR
54
A
O
THR
38
A
N
MET
104
A
N
MET
88
A
O
LYS
107
A
O
LYS
91
A
N
LYS
86
A
N
LYS
69
1
A
PHE
41
-140.08
-8.16
1
A
HIS
71
-128.93
-76.89
1
A
ASN
93
-95.88
39.69
1
A
VAL
147
-101.97
-61.62
PROTEIN_REP.PARAM
PROTEIN.TOP
WATER_REP.PARAM
WATER.TOP
CARBOHYDRATE.PARAM
CARBOHYDRATE.TOP
ION.PARAM
ION.TOP
25.1
2.77
0.00
0.00
-2.74
0.00
-0.03
0.208
0.005
0.181
0.184
0.181
2.00
36.07
1935
19629
9.9
92.5
RANDOM
268424.98
0.000000
1
RESTRAINED
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
PDB ENTRY 1BQY
Engh & Huber
FLAT MODEL
43.4156
0.352518
0.25
0.21
5.00
0.23
0.25
2.00
36.07
142
1966
48
0
1776
0.005
1.3
25.0
0.83
1.34
1.50
2.12
2.00
2.15
2.00
3.29
2.50
0.266
0.017
0.28
2.13
259
2472
6
9.5
78.8
11.4
2.00
50.00
1OP0
20865
20865
0.00
0.00
0.123
1
98.1
2.00
2.05
1
85.4
refinement
CNS
1.0
data reduction
DENZO
data scaling
SCALEPACK
phasing
AMoRE
Crystal Structure of AaV-SP-I, a Glycosylated Snake Venom Serine Proteinase from Agkistrodon acutus
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
A
ALA
55
A
ALA
39
HELX_P
A
ASP
59
A
ASP
43
5
1
5
A
ASP
164
A
ASP
146
HELX_P
A
TYR
172
A
TYR
154
1
2
9
A
TYR
234
A
TYR
216
HELX_P
A
GLY
244
A
GLY
226
1
3
11
disulf
2.033
A
CYS
22
A
SG
CYS
7
1_555
A
CYS
157
A
SG
CYS
139
1_555
disulf
2.031
A
CYS
42
A
SG
CYS
26
1_555
A
CYS
58
A
SG
CYS
42
1_555
disulf
2.030
E
A
CYS
91
A
SG
CYS
74
1_555
A
CYS
245
A
SG
CYS
232
1_555
disulf
2.027
A
CYS
136
A
SG
CYS
118
1_555
A
CYS
201
A
SG
CYS
186
1_555
disulf
2.028
A
CYS
168
A
SG
CYS
150
1_555
A
CYS
182
A
SG
CYS
165
1_555
disulf
2.030
A
CYS
191
A
SG
CYS
176
1_555
A
CYS
220
A
SG
CYS
201
1_555
covale
1.450
one
N-Glycosylation
A
ASN
35
A
ND2
ASN
20
1_555
B
NAG
1
B
C1
NAG
1_555
covale
1.383
both
B
NAG
1
B
O4
NAG
1_555
B
NAG
2
B
C1
NAG
1_555
covale
1.402
both
B
NAG
1
B
O6
NAG
1_555
B
FUC
3
B
C1
FUC
1_555
HYDROLASE
snake venom, serine proteinase, glycoprotein, Agkistrodon acutus, hydrolase
A
HIS
218
A
HIS
199
1
A
PRO
219
A
PRO
200
-0.03
VSP2_AGKAC
UNP
1
25
Q9I8X1
VIGGNECDINEHRFLVAFFNTTGFFCGGTLINPEWVVTAAHCDSTNFQMQLGVHSKKVLNEDEQTRNPKEKFICPNKNNN
EVLDKDIMLIKLDKPISNSKHIAPLSLPSSPPSVGSVCRIMGWGSITPVKETFPDVPYCANINLLDHAVCQAGYPELLAE
YRTLCAGIVQGGKDTCGGDSGGPLICNGQFQGIVSYGAHPCGQGPKPGIYTNVFDYTDWIQRNIAGNTDATCPP
25
258
1OP0
16
245
Q9I8X1
G
A
1
1
234
1
ASN
conflict
ASP
63
1OP0
A
Q9I8X1
UNP
70
46
8
7
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ASN
20
A
ASN
5
A
GLU
21
A
GLU
6
A
TYR
156
A
TYR
138
A
LEU
163
A
LEU
145
A
VAL
135
A
VAL
117
A
GLY
140
A
GLY
122
A
PRO
198
A
PRO
183
A
CYS
201
A
CYS
186
A
GLN
208
A
GLN
189
A
TYR
215
A
TYR
196
A
GLY
226
A
GLY
208
A
ASN
230
A
ASN
212
A
THR
180
A
THR
163
A
GLY
184
A
GLY
167
A
TYR
156
A
TYR
138
A
LEU
163
A
LEU
145
A
GLN
81
A
GLN
64
A
ARG
83
A
ARG
66
A
GLN
65
A
GLN
48
A
LEU
68
A
LEU
51
A
LEU
30
A
LEU
15
A
ASN
35
A
ASN
20
A
GLY
39
A
GLY
23
A
ASN
48
A
ASN
32
A
TRP
51
A
TRP
35
A
THR
54
A
THR
38
A
MET
104
A
MET
88
A
LEU
108
A
LEU
92
A
PRO
85
A
PRO
68
A
ILE
90
A
ILE
73
19
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