0.021142
0.000000
0.000000
0.000000
0.021142
0.000000
0.000000
0.000000
0.004617
0.00000
0.00000
0.00000
Scapin, G.
Sacchettini, J.C.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
47.300
47.300
216.600
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C5 H4 N2 O4
156.096
OROTIC ACID
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C5 H13 O14 P3
390.070
n
1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose
ALPHA-PHOSPHORIBOSYLPYROPHOSPHORIC ACID; 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribose; 1-O-pyrophosphono-5-O-phosphono-D-ribose; 1-O-pyrophosphono-5-O-phosphono-ribose
D-saccharide
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
MG
Y
251
N
N
Y
252
N
C
N
253
N
O
Y
254
N
N
Y
255
N
C
N
256
N
O
Y
257
N
C
Y
258
N
C
N
259
N
C
N
260
N
O
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
N
N
267
S
C
N
268
N
C
N
269
N
O
N
270
N
C
Y
271
N
C
Y
272
N
C
Y
273
N
C
Y
274
N
C
Y
275
N
C
Y
276
N
C
N
277
N
O
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
N
N
290
S
C
N
291
N
C
N
292
N
O
N
293
N
C
N
294
N
C
N
295
N
C
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
R
C
N
307
R
C
N
308
S
C
N
309
R
C
N
310
N
C
N
311
N
O
N
312
N
O
N
313
N
O
N
314
N
O
N
315
N
O
N
316
N
P
N
317
N
O
N
318
N
O
N
319
N
O
N
320
R
P
N
321
N
O
N
322
N
O
N
323
N
O
N
324
N
P
N
325
N
O
N
326
N
O
N
327
N
O
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
N
N
342
S
C
N
343
N
C
N
344
N
O
N
345
N
C
N
346
N
O
N
347
N
O
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
N
N
356
S
C
N
357
N
C
N
358
N
O
N
359
R
C
N
360
N
O
N
361
N
C
N
362
N
O
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
Y
377
N
C
Y
378
N
C
Y
379
N
C
Y
380
N
C
Y
381
N
C
Y
382
N
C
N
383
N
O
N
384
N
O
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
N
N
397
S
C
N
398
N
C
N
399
N
O
N
400
N
C
N
401
N
C
N
402
N
C
N
403
N
O
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
Y
237
N
sing
Y
238
N
sing
N
239
N
sing
N
240
N
doub
Y
241
N
sing
Y
242
N
sing
N
243
N
sing
N
244
N
doub
Y
245
N
sing
Y
246
N
doub
N
247
N
sing
N
248
N
sing
N
249
N
doub
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
doub
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
Y
263
N
doub
Y
264
N
sing
Y
265
N
sing
N
266
N
sing
Y
267
N
doub
N
268
N
sing
Y
269
N
doub
N
270
N
sing
Y
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
doub
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
doub
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
doub
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
doub
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
doub
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
doub
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
Y
367
N
doub
Y
368
N
sing
Y
369
N
sing
N
370
N
sing
Y
371
N
doub
N
372
N
sing
Y
373
N
doub
N
374
N
sing
Y
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
doub
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
34
10744
10754
10.1021/bi00034a006
7545004
The crystal structure of the orotate phosphoribosyltransferase complexed with orotate and alpha-D-5-phosphoribosyl-1-pyrophosphate.
1995
US
Biochemistry
BICHAW
0033
0006-2960
33
1287
Crystal Structure of Orotate Phosphoribosyltransferase
1994
10.2210/pdb1opr/pdb
pdb_00001opr
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
x-ray
1
1.0
23591.973
OROTATE PHOSPHORIBOSYLTRANSFERASE
2.4.2.10
1
man
polymer
24.305
MAGNESIUM ION
1
syn
non-polymer
156.096
OROTIC ACID
1
syn
non-polymer
390.070
1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose
1
syn
non-polymer
18.015
water
61
nat
water
OPRTASE
no
no
MKPYQRQFIEFALNKQVLKFGEFTLKSGRKSPYFFNAGLFNTGRDLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATT
TAVALAEHHDKDLPYCFNRKEAKDHGEGGSLVGSALQGRVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLDRQERG
RGEISAIQEVERDYGCKVISIITLKDLIAYLEEKPDMAEHLAAVRAYREEFGV
MKPYQRQFIEFALNKQVLKFGEFTLKSGRKSPYFFNAGLFNTGRDLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATT
TAVALAEHHDKDLPYCFNRKEAKDHGEGGSLVGSALQGRVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLDRQERG
RGEISAIQEVERDYGCKVISIITLKDLIAYLEEKPDMAEHLAAVRAYREEFGV
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Salmonella
Escherichia
sample
602
Salmonella typhimurium
562
Escherichia coli
2.57
52.08
pdbx_database_status
software
software
chem_comp
entity
pdbx_chem_comp_identifier
pdbx_entity_nonpoly
pdbx_struct_conn_angle
struct_conn
struct_site
struct_site_gen
chem_comp
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Derived calculations
Version format compliance
Data collection
Other
Refinement description
Data collection
Refinement description
Data collection
Derived calculations
Structure summary
Data collection
Database references
Structure summary
1
0
1996-01-06
1
1
2008-03-24
1
2
2011-07-13
1
3
2019-07-17
1
4
2019-08-14
1
5
2020-07-29
1
6
2024-02-14
_pdbx_database_status.process_site
_software.classification
_software.classification
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.type
_entity.pdbx_description
_pdbx_entity_nonpoly.name
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
a-D-Ribf1PO35PO3
Y
BNL
1995-01-06
REL
MG
MAGNESIUM ION
ORO
OROTIC ACID
PRP
1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose
HOH
water
MG
300
2
MG
MG
300
A
ORO
220
3
ORO
ORO
220
A
PRP
221
4
PRP
PRP
221
A
HOH
501
5
HOH
HOH
501
A
HOH
502
5
HOH
HOH
502
A
HOH
503
5
HOH
HOH
503
A
HOH
504
5
HOH
HOH
504
A
HOH
505
5
HOH
HOH
505
A
HOH
506
5
HOH
HOH
506
A
HOH
507
5
HOH
HOH
507
A
HOH
508
5
HOH
HOH
508
A
HOH
509
5
HOH
HOH
509
A
HOH
510
5
HOH
HOH
510
A
HOH
511
5
HOH
HOH
511
A
HOH
512
5
HOH
HOH
512
A
HOH
513
5
HOH
HOH
513
A
HOH
514
5
HOH
HOH
514
A
HOH
515
5
HOH
HOH
515
A
HOH
516
5
HOH
HOH
516
A
HOH
517
5
HOH
HOH
517
A
HOH
518
5
HOH
HOH
518
A
HOH
519
5
HOH
HOH
519
A
HOH
520
5
HOH
HOH
520
A
HOH
521
5
HOH
HOH
521
A
HOH
522
5
HOH
HOH
522
A
HOH
523
5
HOH
HOH
523
A
HOH
524
5
HOH
HOH
524
A
HOH
525
5
HOH
HOH
525
A
HOH
526
5
HOH
HOH
526
A
HOH
527
5
HOH
HOH
527
A
HOH
528
5
HOH
HOH
528
A
HOH
529
5
HOH
HOH
529
A
HOH
530
5
HOH
HOH
530
A
HOH
531
5
HOH
HOH
531
A
HOH
532
5
HOH
HOH
532
A
HOH
533
5
HOH
HOH
533
A
HOH
534
5
HOH
HOH
534
A
HOH
535
5
HOH
HOH
535
A
HOH
536
5
HOH
HOH
536
A
HOH
537
5
HOH
HOH
537
A
HOH
538
5
HOH
HOH
538
A
HOH
539
5
HOH
HOH
539
A
HOH
540
5
HOH
HOH
540
A
HOH
541
5
HOH
HOH
541
A
HOH
542
5
HOH
HOH
542
A
HOH
543
5
HOH
HOH
543
A
HOH
544
5
HOH
HOH
544
A
HOH
545
5
HOH
HOH
545
A
HOH
546
5
HOH
HOH
546
A
HOH
547
5
HOH
HOH
547
A
HOH
548
5
HOH
HOH
548
A
HOH
549
5
HOH
HOH
549
A
HOH
550
5
HOH
HOH
550
A
HOH
551
5
HOH
HOH
551
A
HOH
552
5
HOH
HOH
552
A
HOH
553
5
HOH
HOH
553
A
HOH
554
5
HOH
HOH
554
A
HOH
555
5
HOH
HOH
555
A
HOH
556
5
HOH
HOH
556
A
HOH
557
5
HOH
HOH
557
A
HOH
558
5
HOH
HOH
558
A
HOH
559
5
HOH
HOH
559
A
HOH
560
5
HOH
HOH
560
A
HOH
561
5
HOH
HOH
561
A
MET
1
n
1
MET
1
A
LYS
2
n
2
LYS
2
A
PRO
3
n
3
PRO
3
A
TYR
4
n
4
TYR
4
A
GLN
5
n
5
GLN
5
A
ARG
6
n
6
ARG
6
A
GLN
7
n
7
GLN
7
A
PHE
8
n
8
PHE
8
A
ILE
9
n
9
ILE
9
A
GLU
10
n
10
GLU
10
A
PHE
11
n
11
PHE
11
A
ALA
12
n
12
ALA
12
A
LEU
13
n
13
LEU
13
A
ASN
14
n
14
ASN
14
A
LYS
15
n
15
LYS
15
A
GLN
16
n
16
GLN
16
A
VAL
17
n
17
VAL
17
A
LEU
18
n
18
LEU
18
A
LYS
19
n
19
LYS
19
A
PHE
20
n
20
PHE
20
A
GLY
21
n
21
GLY
21
A
GLU
22
n
22
GLU
22
A
PHE
23
n
23
PHE
23
A
THR
24
n
24
THR
24
A
LEU
25
n
25
LEU
25
A
LYS
26
n
26
LYS
26
A
SER
27
n
27
SER
27
A
GLY
28
n
28
GLY
28
A
ARG
29
n
29
ARG
29
A
LYS
30
n
30
LYS
30
A
SER
31
n
31
SER
31
A
PRO
32
n
32
PRO
32
A
TYR
33
n
33
TYR
33
A
PHE
34
n
34
PHE
34
A
PHE
35
n
35
PHE
35
A
ASN
36
n
36
ASN
36
A
ALA
37
n
37
ALA
37
A
GLY
38
n
38
GLY
38
A
LEU
39
n
39
LEU
39
A
PHE
40
n
40
PHE
40
A
ASN
41
n
41
ASN
41
A
THR
42
n
42
THR
42
A
GLY
43
n
43
GLY
43
A
ARG
44
n
44
ARG
44
A
ASP
45
n
45
ASP
45
A
LEU
46
n
46
LEU
46
A
ALA
47
n
47
ALA
47
A
LEU
48
n
48
LEU
48
A
LEU
49
n
49
LEU
49
A
GLY
50
n
50
GLY
50
A
ARG
51
n
51
ARG
51
A
PHE
52
n
52
PHE
52
A
TYR
53
n
53
TYR
53
A
ALA
54
n
54
ALA
54
A
GLU
55
n
55
GLU
55
A
ALA
56
n
56
ALA
56
A
LEU
57
n
57
LEU
57
A
VAL
58
n
58
VAL
58
A
ASP
59
n
59
ASP
59
A
SER
60
n
60
SER
60
A
GLY
61
n
61
GLY
61
A
ILE
62
n
62
ILE
62
A
GLU
63
n
63
GLU
63
A
PHE
64
n
64
PHE
64
A
ASP
65
n
65
ASP
65
A
LEU
66
n
66
LEU
66
A
LEU
67
n
67
LEU
67
A
PHE
68
n
68
PHE
68
A
GLY
69
n
69
GLY
69
A
PRO
70
n
70
PRO
70
A
ALA
71
n
71
ALA
71
A
TYR
72
n
72
TYR
72
A
LYS
73
n
73
LYS
73
A
GLY
74
n
74
GLY
74
A
ILE
75
n
75
ILE
75
A
PRO
76
n
76
PRO
76
A
ILE
77
n
77
ILE
77
A
ALA
78
n
78
ALA
78
A
THR
79
n
79
THR
79
A
THR
80
n
80
THR
80
A
THR
81
n
81
THR
81
A
ALA
82
n
82
ALA
82
A
VAL
83
n
83
VAL
83
A
ALA
84
n
84
ALA
84
A
LEU
85
n
85
LEU
85
A
ALA
86
n
86
ALA
86
A
GLU
87
n
87
GLU
87
A
HIS
88
n
88
HIS
88
A
HIS
89
n
89
HIS
89
A
ASP
90
n
90
ASP
90
A
LYS
91
n
91
LYS
91
A
ASP
92
n
92
ASP
92
A
LEU
93
n
93
LEU
93
A
PRO
94
n
94
PRO
94
A
TYR
95
n
95
TYR
95
A
CYS
96
n
96
CYS
96
A
PHE
97
n
97
PHE
97
A
ASN
98
n
98
ASN
98
A
ARG
99
n
99
ARG
99
A
LYS
100
n
100
LYS
100
A
GLU
101
n
101
GLU
101
A
ALA
102
n
102
ALA
102
A
LYS
103
n
103
LYS
103
A
ASP
104
n
104
ASP
104
A
HIS
105
n
105
HIS
105
A
GLY
106
n
106
GLY
106
A
GLU
107
n
107
GLU
107
A
GLY
108
n
108
GLY
108
A
GLY
109
n
109
GLY
109
A
SER
110
n
110
SER
110
A
LEU
111
n
111
LEU
111
A
VAL
112
n
112
VAL
112
A
GLY
113
n
113
GLY
113
A
SER
114
n
114
SER
114
A
ALA
115
n
115
ALA
115
A
LEU
116
n
116
LEU
116
A
GLN
117
n
117
GLN
117
A
GLY
118
n
118
GLY
118
A
ARG
119
n
119
ARG
119
A
VAL
120
n
120
VAL
120
A
MET
121
n
121
MET
121
A
LEU
122
n
122
LEU
122
A
VAL
123
n
123
VAL
123
A
ASP
124
n
124
ASP
124
A
ASP
125
n
125
ASP
125
A
VAL
126
n
126
VAL
126
A
ILE
127
n
127
ILE
127
A
THR
128
n
128
THR
128
A
ALA
129
n
129
ALA
129
A
GLY
130
n
130
GLY
130
A
THR
131
n
131
THR
131
A
ALA
132
n
132
ALA
132
A
ILE
133
n
133
ILE
133
A
ARG
134
n
134
ARG
134
A
GLU
135
n
135
GLU
135
A
SER
136
n
136
SER
136
A
MET
137
n
137
MET
137
A
GLU
138
n
138
GLU
138
A
ILE
139
n
139
ILE
139
A
ILE
140
n
140
ILE
140
A
GLN
141
n
141
GLN
141
A
ALA
142
n
142
ALA
142
A
HIS
143
n
143
HIS
143
A
GLY
144
n
144
GLY
144
A
ALA
145
n
145
ALA
145
A
THR
146
n
146
THR
146
A
LEU
147
n
147
LEU
147
A
ALA
148
n
148
ALA
148
A
GLY
149
n
149
GLY
149
A
VAL
150
n
150
VAL
150
A
LEU
151
n
151
LEU
151
A
ILE
152
n
152
ILE
152
A
SER
153
n
153
SER
153
A
LEU
154
n
154
LEU
154
A
ASP
155
n
155
ASP
155
A
ARG
156
n
156
ARG
156
A
GLN
157
n
157
GLN
157
A
GLU
158
n
158
GLU
158
A
ARG
159
n
159
ARG
159
A
GLY
160
n
160
GLY
160
A
ARG
161
n
161
ARG
161
A
GLY
162
n
162
GLY
162
A
GLU
163
n
163
GLU
163
A
ILE
164
n
164
ILE
164
A
SER
165
n
165
SER
165
A
ALA
166
n
166
ALA
166
A
ILE
167
n
167
ILE
167
A
GLN
168
n
168
GLN
168
A
GLU
169
n
169
GLU
169
A
VAL
170
n
170
VAL
170
A
GLU
171
n
171
GLU
171
A
ARG
172
n
172
ARG
172
A
ASP
173
n
173
ASP
173
A
TYR
174
n
174
TYR
174
A
GLY
175
n
175
GLY
175
A
CYS
176
n
176
CYS
176
A
LYS
177
n
177
LYS
177
A
VAL
178
n
178
VAL
178
A
ILE
179
n
179
ILE
179
A
SER
180
n
180
SER
180
A
ILE
181
n
181
ILE
181
A
ILE
182
n
182
ILE
182
A
THR
183
n
183
THR
183
A
LEU
184
n
184
LEU
184
A
LYS
185
n
185
LYS
185
A
ASP
186
n
186
ASP
186
A
LEU
187
n
187
LEU
187
A
ILE
188
n
188
ILE
188
A
ALA
189
n
189
ALA
189
A
TYR
190
n
190
TYR
190
A
LEU
191
n
191
LEU
191
A
GLU
192
n
192
GLU
192
A
GLU
193
n
193
GLU
193
A
LYS
194
n
194
LYS
194
A
PRO
195
n
195
PRO
195
A
ASP
196
n
196
ASP
196
A
MET
197
n
197
MET
197
A
ALA
198
n
198
ALA
198
A
GLU
199
n
199
GLU
199
A
HIS
200
n
200
HIS
200
A
LEU
201
n
201
LEU
201
A
ALA
202
n
202
ALA
202
A
ALA
203
n
203
ALA
203
A
VAL
204
n
204
VAL
204
A
ARG
205
n
205
ARG
205
A
ALA
206
n
206
ALA
206
A
TYR
207
n
207
TYR
207
A
ARG
208
n
208
ARG
208
A
GLU
209
n
209
GLU
209
A
GLU
210
n
210
GLU
210
A
PHE
211
n
211
PHE
211
A
GLY
212
n
212
GLY
212
A
VAL
213
n
213
VAL
213
A
author_and_software_defined_assembly
PISA,PQS
2
dimeric
5130
-49
18220
A
PRP
221
D
O1
PRP
1_555
A
MG
300
B
MG
MG
1_555
A
PRP
221
D
O2
PRP
1_555
61.3
A
PRP
221
D
O1
PRP
1_555
A
MG
300
B
MG
MG
1_555
A
PRP
221
D
O3A
PRP
1_555
53.1
A
PRP
221
D
O2
PRP
1_555
A
MG
300
B
MG
MG
1_555
A
PRP
221
D
O3A
PRP
1_555
69.3
A
PRP
221
D
O1
PRP
1_555
A
MG
300
B
MG
MG
1_555
A
PRP
221
D
O3B
PRP
1_555
105.2
A
PRP
221
D
O2
PRP
1_555
A
MG
300
B
MG
MG
1_555
A
PRP
221
D
O3B
PRP
1_555
97.3
A
PRP
221
D
O3A
PRP
1_555
A
MG
300
B
MG
MG
1_555
A
PRP
221
D
O3B
PRP
1_555
52.4
A
PRP
221
D
O1
PRP
1_555
A
MG
300
B
MG
MG
1_555
A
PRP
221
D
O3
PRP
1_555
71.5
A
PRP
221
D
O2
PRP
1_555
A
MG
300
B
MG
MG
1_555
A
PRP
221
D
O3
PRP
1_555
55.3
A
PRP
221
D
O3A
PRP
1_555
A
MG
300
B
MG
MG
1_555
A
PRP
221
D
O3
PRP
1_555
115.3
A
PRP
221
D
O3B
PRP
1_555
A
MG
300
B
MG
MG
1_555
A
PRP
221
D
O3
PRP
1_555
151.2
A
PRP
221
D
O1
PRP
1_555
A
MG
300
B
MG
MG
1_555
A
HOH
561
E
O
HOH
1_555
154.1
A
PRP
221
D
O2
PRP
1_555
A
MG
300
B
MG
MG
1_555
A
HOH
561
E
O
HOH
1_555
94.4
A
PRP
221
D
O3A
PRP
1_555
A
MG
300
B
MG
MG
1_555
A
HOH
561
E
O
HOH
1_555
130.0
A
PRP
221
D
O3B
PRP
1_555
A
MG
300
B
MG
MG
1_555
A
HOH
561
E
O
HOH
1_555
85.7
A
PRP
221
D
O3
PRP
1_555
A
MG
300
B
MG
MG
1_555
A
HOH
561
E
O
HOH
1_555
87.6
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
7_555
y,x,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
A
O
PRO
94
A
O
PRO
94
A
N
LEU
67
A
N
LEU
67
A
O
PHE
68
A
O
PHE
68
A
N
VAL
123
A
N
VAL
123
A
N
LEU
122
A
N
LEU
122
A
O
GLY
149
A
O
GLY
149
A
O
VAL
150
A
O
VAL
150
A
N
ILE
179
A
N
ILE
179
1
A
CG
GLU
101
A
CG
GLU
101
1
Y
1
A
CD
GLU
101
A
CD
GLU
101
1
Y
1
A
OE1
GLU
101
A
OE1
GLU
101
1
Y
1
A
OE2
GLU
101
A
OE2
GLU
101
1
Y
1
A
CG
ASP
104
A
CG
ASP
104
1
Y
1
A
OD1
ASP
104
A
OD1
ASP
104
1
Y
1
A
OD2
ASP
104
A
OD2
ASP
104
1
Y
1
A
CG
HIS
105
A
CG
HIS
105
1
Y
1
A
ND1
HIS
105
A
ND1
HIS
105
1
Y
1
A
CD2
HIS
105
A
CD2
HIS
105
1
Y
1
A
CE1
HIS
105
A
CE1
HIS
105
1
Y
1
A
NE2
HIS
105
A
NE2
HIS
105
1
Y
1
A
CG
GLU
107
A
CG
GLU
107
1
Y
1
A
CD
GLU
107
A
CD
GLU
107
1
Y
1
A
OE1
GLU
107
A
OE1
GLU
107
1
Y
1
A
OE2
GLU
107
A
OE2
GLU
107
1
Y
1
A
A
C
N
ALA
VAL
203
204
1.20
1
-3.70
0.50
120.30
116.60
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
6
6
6
N
1
3.67
0.50
120.30
123.97
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
29
29
29
N
1
-3.28
0.50
120.30
117.02
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
29
29
29
N
1
-5.71
0.90
118.30
112.59
A
A
A
CB
CG
OD2
ASP
ASP
ASP
124
124
124
N
1
-3.18
0.50
120.30
117.12
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
156
156
156
N
1
-5.42
0.90
118.30
112.88
A
A
A
CB
CG
OD2
ASP
ASP
ASP
173
173
173
N
1
-7.60
0.90
118.30
110.70
A
A
A
CB
CG
OD1
ASP
ASP
ASP
196
196
196
N
1
-12.38
1.60
122.70
110.32
A
A
A
O
C
N
ALA
ALA
VAL
203
203
204
Y
1
7.27
0.50
120.30
127.57
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
205
205
205
N
1
-4.51
0.50
120.30
115.79
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
205
205
205
N
1
4.78
0.50
120.30
125.08
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
208
208
208
N
1
A
A
CD
OE1
GLU
GLU
10
10
0.083
0.011
1.252
1.335
N
1
A
A
CD
OE1
GLU
GLU
22
22
0.088
0.011
1.252
1.340
N
1
A
A
CD
OE1
GLU
GLU
135
135
0.080
0.011
1.252
1.332
N
1
A
A
CD
OE1
GLU
GLU
138
138
0.083
0.011
1.252
1.335
N
1
A
A
CD
OE1
GLU
GLU
158
158
0.074
0.011
1.252
1.326
N
1
A
A
CD
OE1
GLU
GLU
163
163
0.074
0.011
1.252
1.326
N
1
A
A
CD
OE2
GLU
GLU
171
171
0.093
0.011
1.252
1.345
N
1
A
A
CD
OE1
GLU
GLU
193
193
0.088
0.011
1.252
1.340
N
1
A
A
CD
OE2
GLU
GLU
199
199
0.097
0.011
1.252
1.349
N
1
A
A
C
N
ALA
VAL
203
204
-0.139
0.023
1.336
1.197
Y
1
A
A
CD
OE1
GLU
GLU
209
209
0.085
0.011
1.252
1.337
N
1
A
ALA
71
28.16
-115.43
1
A
CYS
96
-174.20
148.67
1
A
ALA
102
-149.13
30.70
1
A
LYS
103
-64.14
74.57
1
A
ASP
104
152.39
126.90
1
A
HIS
105
-34.18
91.63
1
A
GLU
107
-116.28
-140.90
1
A
SER
110
-9.74
123.83
1
A
LEU
116
-55.03
84.72
1
A
HIS
143
-53.47
-2.03
1
A
ASP
196
-93.67
31.42
0.187
2.3
15.
8993
76.
1
2.0
2.3
15.
61
1740
34
0
1645
0.017
2.5
2.04
19.0
1OPR
12880
0.0
1
77.5
model building
X-PLOR
refinement
TNT
refinement
X-PLOR
phasing
X-PLOR
THE CRYSTAL STRUCTURE OF THE OROTATE PHOSPHORIBOSYLTRANSFERASE COMPLEXED WITH OROTATE AND ALPHA-D-5-PHOSPHORIBOSYL-1-PYROPHOSPHATE
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
A
TYR
4
A
TYR
4
HELX_P
A
PHE
20
A
PHE
20
1
H1
17
A
ASN
41
A
ASN
41
HELX_P
A
ASP
59
A
ASP
59
1
H2
19
A
GLY
74
A
GLY
74
HELX_P
A
HIS
88
A
HIS
88
1
H3
15
A
ARG
134
A
ARG
134
HELX_P
A
ALA
142
A
ALA
142
1
H4
9
A
SER
165
A
SER
165
HELX_P
A
ASP
173
A
ASP
173
1
H5
9
A
LYS
185
A
LYS
185
HELX_P
A
GLU
193
A
GLU
193
1
H6
9
A
ALA
198
A
ALA
198
HELX_P
A
GLU
210
A
GLU
210
1
H7
13
metalc
2.861
A
PRP
221
D
O1
PRP
1_555
A
MG
300
B
MG
MG
1_555
metalc
2.539
A
PRP
221
D
O2
PRP
1_555
A
MG
300
B
MG
MG
1_555
metalc
2.627
A
PRP
221
D
O3A
PRP
1_555
A
MG
300
B
MG
MG
1_555
metalc
2.875
A
PRP
221
D
O3B
PRP
1_555
A
MG
300
B
MG
MG
1_555
metalc
2.770
A
PRP
221
D
O3
PRP
1_555
A
MG
300
B
MG
MG
1_555
metalc
2.566
A
MG
300
B
MG
MG
1_555
A
HOH
561
E
O
HOH
1_555
TRANSFERASE
TRANSFERASE
PYRE_SALTY
UNP
1
1
P08870
KPYQRQFIEFALNKQVLKFGEFTLKSGRKSPYFFNAGLFNTGRDLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTT
AVALAEHHDKDLPYCFNRKEAKDHGEGGSLVGSALQGRVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLDRQERGR
GEISAIQEVERDYGCKVISIITLKDLIAYLEEKPDMAEHLAAVRAYREEFGV
1
212
1OPR
2
213
P08870
A
1
2
213
5
parallel
parallel
parallel
parallel
A
LYS
91
A
LYS
91
A
ARG
99
A
ARG
99
A
LEU
66
A
LEU
66
A
ALA
71
A
ALA
71
A
ARG
119
A
ARG
119
A
ASP
125
A
ASP
125
A
LEU
147
A
LEU
147
A
ILE
152
A
ILE
152
A
CYS
176
A
CYS
176
A
ILE
181
A
ILE
181
92
P 41 21 2