0.011657 0.000000 0.000000 0.000000 0.007911 0.000000 0.000000 0.000000 0.018267 0.00000 0.00000 0.00000 Raju, T.S. Mulkerrin, M.G. Parker, M. De Vos, A.M. Gazzano-Santoro, H. Totpal, K. Ultsch, M.H. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 85.782 126.413 54.743 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C6 H12 O6 180.156 beta-D-mannopyranose beta-D-mannose; D-mannose; mannose D-saccharide, beta linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C6 H12 O5 164.156 alpha-L-fucopyranose alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose L-saccharide, alpha linking C6 H12 O5 164.156 beta-L-fucopyranose beta-L-fucose; 6-deoxy-beta-L-galactopyranose; L-fucose; fucose; 6-DEOXY-BETA-L-GALACTOSE L-saccharide, beta linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C6 H12 O6 180.156 alpha-D-mannopyranose alpha-D-mannose; D-mannose; mannose D-saccharide, alpha linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C8 H15 N O6 221.208 2-acetamido-2-deoxy-beta-D-glucopyranose N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE D-saccharide, beta linking C8 H15 N O6 221.208 2-acetamido-2-deoxy-alpha-D-glucopyranose N-acetyl-alpha-D-glucosamine; 2-acetamido-2-deoxy-alpha-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE D-saccharide, alpha linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 R C N 75 S C N 76 S C N 77 S C N 78 R C N 79 N C N 80 N O N 81 N O N 82 N O N 83 N O N 84 N O N 85 N O N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N N N 99 R C N 100 N C N 101 N O N 102 N C N 103 N S N 104 N O N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 R C N 113 S C N 114 R C N 115 S C N 116 S C N 117 N C N 118 N O N 119 N O N 120 N O N 121 N O N 122 N O N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 S C N 136 S C N 137 N O N 138 R C N 139 N O N 140 S C N 141 N O N 142 S C N 143 N C N 144 N O N 145 N O N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N N N 159 S C N 160 N C N 161 N O N 162 N C N 163 N C N 164 N C N 165 N O N 166 N N N 167 N O N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N N N 179 S C N 180 N C N 181 N O N 182 N C N 183 N C N 184 N C N 185 N O N 186 N O N 187 N O N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N N N 198 N C N 199 N C N 200 N O N 201 N O N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N N N 208 S C N 209 N C N 210 N O N 211 N C Y 212 N C Y 213 N N Y 214 N C Y 215 N C Y 216 N N N 217 N O N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N O N 229 N H N 230 N H N 231 N N N 232 S C N 233 N C N 234 N O N 235 S C N 236 N C N 237 N C N 238 N C N 239 N O N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N N N 254 S C N 255 N C N 256 N O N 257 N C N 258 N C N 259 N C N 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N N N 276 S C N 277 N C N 278 N O N 279 N C N 280 N C N 281 N C N 282 N C N 283 N N N 284 N O N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 S C N 301 S C N 302 S C N 303 S C N 304 R C N 305 N C N 306 N O N 307 N O N 308 N O N 309 N O N 310 N O N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N N N 325 S C N 326 N C N 327 N O N 328 N C N 329 N C N 330 N S N 331 N C N 332 N O N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 R C N 345 R C N 346 R C N 347 S C N 348 R C N 349 N C N 350 N C N 351 N C N 352 N N N 353 N O N 354 N O N 355 N O N 356 N O N 357 N O N 358 N O N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 S C N 375 R C N 376 R C N 377 S C N 378 R C N 379 N C N 380 N C N 381 N C N 382 N O N 383 N O N 384 N O N 385 N O N 386 N O N 387 N N N 388 N O N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N N N 405 S C N 406 N C N 407 N O N 408 N C Y 409 N C Y 410 N C Y 411 N C Y 412 N C Y 413 N C Y 414 N C N 415 N O N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N N N 428 S C N 429 N C N 430 N O N 431 N C N 432 N C N 433 N C N 434 N O N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N N N 445 S C N 446 N C N 447 N O N 448 N C N 449 N O N 450 N O N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N N N 459 S C N 460 N C N 461 N O N 462 R C N 463 N O N 464 N C N 465 N O N 466 N H N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N N N 476 S C N 477 N C N 478 N O N 479 N C Y 480 N C Y 481 N C Y 482 N C Y 483 N N Y 484 N C Y 485 N C Y 486 N C Y 487 N C Y 488 N C N 489 N O N 490 N H N 491 N H N 492 N H N 493 N H N 494 N H N 495 N H N 496 N H N 497 N H N 498 N H N 499 N H N 500 N H N 501 N H N 502 N N N 503 S C N 504 N C N 505 N O N 506 N C Y 507 N C Y 508 N C Y 509 N C Y 510 N C Y 511 N C Y 512 N C N 513 N O N 514 N O N 515 N H N 516 N H N 517 N H N 518 N H N 519 N H N 520 N H N 521 N H N 522 N H N 523 N H N 524 N H N 525 N H N 526 N N N 527 S C N 528 N C N 529 N O N 530 N C N 531 N C N 532 N C N 533 N O N 534 N H N 535 N H N 536 N H N 537 N H N 538 N H N 539 N H N 540 N H N 541 N H N 542 N H N 543 N H N 544 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N doub N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N doub N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N doub N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N doub N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N doub N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N doub N 206 N sing N 207 N sing N 208 N sing N 209 N sing Y 210 N sing Y 211 N doub Y 212 N doub N 213 N sing Y 214 N sing N 215 N sing Y 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N doub N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N doub N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N doub N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N doub N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N doub N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N doub N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N doub N 398 N sing N 399 N sing N 400 N sing N 401 N sing Y 402 N doub Y 403 N sing Y 404 N sing N 405 N sing Y 406 N doub N 407 N sing Y 408 N doub N 409 N sing Y 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N doub N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N doub N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N doub N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N sing N 462 N sing N 463 N sing N 464 N sing N 465 N sing N 466 N doub N 467 N sing N 468 N sing N 469 N sing N 470 N sing Y 471 N doub Y 472 N sing Y 473 N sing N 474 N sing Y 475 N doub Y 476 N sing Y 477 N sing N 478 N sing Y 479 N sing Y 480 N doub N 481 N sing Y 482 N doub N 483 N sing Y 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N doub N 495 N sing N 496 N sing N 497 N sing N 498 N sing Y 499 N doub Y 500 N sing Y 501 N sing N 502 N sing Y 503 N doub N 504 N sing Y 505 N doub N 506 N sing Y 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N sing N 512 N sing N 513 N sing N 514 N sing N 515 N sing N 516 N sing N 517 N sing N 518 N doub N 519 N sing N 520 N sing N 521 N sing N 522 N sing N 523 N sing N 524 N sing N 525 N sing N 526 N sing N 527 N sing N 528 N sing N 529 N sing To be Published 0353 Impact of Fc Glycans on The Effector Functions Vary with the Antibody mechanism of Action 10.2210/pdb1oqo/pdb pdb_00001oqo FUC F 8 HAS WRONG CHIRALITY AT ATOM C1 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 IMAGE PLATE 1998-04-27 MARRESEARCH SINGLE WAVELENGTH M x-ray 1 1.08 1.0 BL9-1 SSRL 1.08 SYNCHROTRON SSRL BEAMLINE BL9-1 23975.072 immunoglobulin gamma-1 heavy chain constant region FC FRAGMENT 2 man polymer 4190.682 Minimized version of Protein A (Z34C) 2 syn polymer 1463.349 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose 1 man branched 1463.349 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose 1 man branched 18.015 water 140 nat water no no GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLN GKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTP PVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLN GKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTP PVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK A,B polypeptide(L) no no FNMQCQRRFYEALHDPNLNEEQRNAKIKSIRDDC FNMQCQRRFYEALHDPNLNEEQRNAKIKSIRDDC C,D polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Chinese hamster Cricetulus sample 9606 Homo sapiens 10029 Cricetulus griseus 1 2.5 50.35 VAPOR DIFFUSION, SITTING DROP 5.5 20% PEG 550 MME, 0.1M NaOAc, 0.25M NaCl, pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 323K 323 atom_site chem_comp database_PDB_caveat entity pdbx_branch_scheme pdbx_chem_comp_identifier pdbx_entity_branch pdbx_entity_branch_descriptor pdbx_entity_branch_link pdbx_entity_branch_list pdbx_entity_nonpoly pdbx_nonpoly_scheme pdbx_struct_assembly_gen pdbx_validate_chiral struct_asym struct_conn struct_site struct_site_gen atom_site chem_comp pdbx_distant_solvent_atoms pdbx_entity_src_syn pdbx_nonpoly_scheme pdbx_struct_assembly pdbx_struct_assembly_gen pdbx_struct_assembly_prop chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model repository Initial release Carbohydrate remediation repository Remediation Version format compliance Non-polymer description Version format compliance Advisory Atomic model Data collection Derived calculations Structure summary Advisory Atomic model Data collection Derived calculations Source and taxonomy Structure summary Data collection Database references Refinement description 1 0 2003-03-20 1 1 2008-04-29 1 2 2011-07-13 2 0 2020-07-29 3 0 2020-12-16 3 1 2023-08-16 _atom_site.B_iso_or_equiv _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.label_asym_id _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_entity_id _atom_site.type_symbol _chem_comp.name _chem_comp.type _pdbx_struct_assembly_gen.asym_id_list _pdbx_validate_chiral.auth_asym_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_role _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _atom_site.B_iso_or_equiv _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.auth_asym_id _atom_site.auth_seq_id _atom_site.label_asym_id _chem_comp.pdbx_synonyms _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.organism_scientific _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.pdb_strand_id _database_2.pdbx_DOI _database_2.pdbx_database_accession E NAG 1 n E NAG 1 E NAG 2 n E NAG 2 E MAN 3 n E BMA 3 E MAN 6 n E MAN 4 E NAG 9 n E NAG 5 E MAN 4 n E MAN 6 E NAG 5 n E NAG 7 E FUC 8 n E FUL 8 F NAG 1 n F NAG 1 F NAG 2 n F NAG 2 F MAN 3 n F BMA 3 F MAN 6 n F MAN 4 F NAG 9 n F NDG 5 F MAN 4 n F MAN 6 F NAG 5 n F NAG 7 F FUC 8 n F FUC 8 DManpb b-D-mannopyranose b-D-Manp Man LFucpa a-L-fucopyranose a-L-Fucp Fuc LFucpb b-L-fucopyranose b-L-Fucp Fuc DManpa a-D-mannopyranose a-D-Manp Man DGlcpNAcb N-acetyl-b-D-glucopyranosamine b-D-GlcpNAc GlcNAc DGlcpNAca N-acetyl-a-D-glucopyranosamine a-D-GlcpNAc GlcNAc The same Mini Z bound to the G2 version of an Fc RCSB Y RCSB 2003-03-10 REL REL 1 A O HOH 558 6.59 1 B O HOH 554 7.05 oligosaccharide oligosaccharide DGlcpNAcb1-2DManpa1-3[DGlcpNAcb1-2DManpa1-6]DManpb1-4DGlcpNAcb1-4[LFucpb1-6]DGlcpNAcb1- 3 GMML 1.0 Glycam Condensed Sequence WURCS=2.0/4,8,7/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a1221m-1b_1-5]/1-1-2-3-1-3-1-4/a4-b1_a6-h1_b4-c1_c3-d1_c6-f1_d2-e1_f2-g1 3 PDB2Glycan 1.1.0 WURCS []{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{[(2+1)][b-D-GlcpNAc]{}}[(6+1)][a-D-Manp]{[(2+1)][b-D-GlcpNAc]{}}}}[(6+1)][b-L-Fucp]{}}} 3 PDB-CARE LINUCS DGlcpNAca1-2DManpa1-3[DGlcpNAcb1-2DManpa1-6]DManpb1-4DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1- 4 GMML 1.0 Glycam Condensed Sequence WURCS=2.0/5,8,7/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2122h-1a_1-5_2*NCC/3=O][a1221m-1a_1-5]/1-1-2-3-4-3-1-5/a4-b1_a6-h1_b4-c1_c3-d1_c6-f1_d2-e1_f2-g1 4 PDB2Glycan 1.1.0 WURCS []{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{[(2+1)][a-D-GlcpNAc]{}}[(6+1)][a-D-Manp]{[(2+1)][b-D-GlcpNAc]{}}}}[(6+1)][b-L-Fucp]{}}} 4 PDB-CARE LINUCS C1 O4 NAG NAG 2 1 3 O1 HO4 sing C1 O4 BMA NAG 3 2 3 O1 HO4 sing C1 O3 MAN BMA 4 3 3 O1 HO3 sing C1 O2 NAG MAN 5 4 3 O1 HO2 sing C1 O6 MAN BMA 6 3 3 O1 HO6 sing C1 O2 NAG MAN 7 6 3 O1 HO2 sing C1 O6 FUL NAG 8 1 3 O1 HO6 sing C1 O4 NAG NAG 2 1 4 O1 HO4 sing C1 O4 BMA NAG 3 2 4 O1 HO4 sing C1 O3 MAN BMA 4 3 4 O1 HO3 sing C1 O2 NDG MAN 5 4 4 O1 HO2 sing C1 O6 MAN BMA 6 3 4 O1 HO6 sing C1 O2 NAG MAN 7 6 4 O1 HO2 sing C1 O6 FUC NAG 8 1 4 O1 HO6 sing n n n n n n n n n n n n n n n n HOH water Phage Optimized sequence from the B-domain of Protein A Staphylococcus Aureus. Peptide Prepared using N-FMOC chemistry on Wang resin. 32630 synthetic construct sample 1L6X PDB Entry 1L6X PDB experimental model HOH 120 5 HOH HOH 501 A HOH 90 5 HOH HOH 502 A HOH 115 5 HOH HOH 503 A HOH 29 5 HOH HOH 504 A HOH 51 5 HOH HOH 505 A HOH 141 5 HOH HOH 506 A HOH 26 5 HOH HOH 507 A HOH 11 5 HOH HOH 508 A HOH 53 5 HOH HOH 509 A HOH 27 5 HOH HOH 510 A HOH 5 5 HOH HOH 511 A HOH 96 5 HOH HOH 512 A HOH 59 5 HOH HOH 513 A HOH 133 5 HOH HOH 514 A HOH 110 5 HOH HOH 515 A HOH 83 5 HOH HOH 516 A HOH 70 5 HOH HOH 517 A HOH 63 5 HOH HOH 518 A HOH 16 5 HOH HOH 519 A HOH 94 5 HOH HOH 520 A HOH 1 5 HOH HOH 521 A HOH 89 5 HOH HOH 522 A HOH 18 5 HOH HOH 523 A HOH 128 5 HOH HOH 524 A HOH 49 5 HOH HOH 525 A HOH 97 5 HOH HOH 526 A HOH 145 5 HOH HOH 527 A HOH 44 5 HOH HOH 528 A HOH 102 5 HOH HOH 529 A HOH 62 5 HOH HOH 530 A HOH 91 5 HOH HOH 531 A HOH 15 5 HOH HOH 532 A HOH 76 5 HOH HOH 533 A HOH 12 5 HOH HOH 534 A HOH 58 5 HOH HOH 535 A HOH 107 5 HOH HOH 536 A HOH 95 5 HOH HOH 537 A HOH 143 5 HOH HOH 538 A HOH 100 5 HOH HOH 539 A HOH 134 5 HOH HOH 540 A HOH 149 5 HOH HOH 541 A HOH 140 5 HOH HOH 542 A HOH 146 5 HOH HOH 543 A HOH 6 5 HOH HOH 544 A HOH 117 5 HOH HOH 545 A HOH 80 5 HOH HOH 546 A HOH 21 5 HOH HOH 547 A HOH 111 5 HOH HOH 548 A HOH 98 5 HOH HOH 549 A HOH 32 5 HOH HOH 550 A HOH 108 5 HOH HOH 551 A HOH 79 5 HOH HOH 552 A HOH 72 5 HOH HOH 553 A HOH 69 5 HOH HOH 554 A HOH 135 5 HOH HOH 555 A HOH 84 5 HOH HOH 556 A HOH 125 5 HOH HOH 557 A HOH 71 5 HOH HOH 558 A HOH 81 5 HOH HOH 559 A HOH 40 5 HOH HOH 101 C HOH 67 5 HOH HOH 102 C HOH 23 5 HOH HOH 103 C HOH 78 5 HOH HOH 104 C HOH 9 5 HOH HOH 105 C HOH 22 5 HOH HOH 106 C HOH 37 5 HOH HOH 107 C HOH 147 5 HOH HOH 108 C HOH 105 5 HOH HOH 109 C HOH 136 5 HOH HOH 110 C HOH 130 5 HOH HOH 111 C HOH 48 5 HOH HOH 112 C HOH 114 5 HOH HOH 113 C HOH 56 5 HOH HOH 114 C HOH 113 5 HOH HOH 115 C HOH 47 5 HOH HOH 116 C HOH 116 5 HOH HOH 117 C HOH 138 5 HOH HOH 118 C HOH 31 5 HOH HOH 501 B HOH 112 5 HOH HOH 502 B HOH 2 5 HOH HOH 503 B HOH 3 5 HOH HOH 504 B HOH 38 5 HOH HOH 505 B HOH 35 5 HOH HOH 506 B HOH 119 5 HOH HOH 507 B HOH 92 5 HOH HOH 508 B HOH 14 5 HOH HOH 509 B HOH 13 5 HOH HOH 510 B HOH 46 5 HOH HOH 511 B HOH 123 5 HOH HOH 512 B HOH 30 5 HOH HOH 513 B HOH 36 5 HOH HOH 514 B HOH 82 5 HOH HOH 515 B HOH 39 5 HOH HOH 516 B HOH 118 5 HOH HOH 517 B HOH 137 5 HOH HOH 518 B HOH 19 5 HOH HOH 519 B HOH 73 5 HOH HOH 520 B HOH 41 5 HOH HOH 521 B HOH 88 5 HOH HOH 522 B HOH 150 5 HOH HOH 523 B HOH 121 5 HOH HOH 524 B HOH 66 5 HOH HOH 525 B HOH 50 5 HOH HOH 526 B HOH 99 5 HOH HOH 527 B HOH 43 5 HOH HOH 528 B HOH 4 5 HOH HOH 529 B HOH 132 5 HOH HOH 530 B HOH 106 5 HOH HOH 531 B HOH 8 5 HOH HOH 532 B HOH 61 5 HOH HOH 533 B HOH 34 5 HOH HOH 534 B HOH 33 5 HOH HOH 535 B HOH 131 5 HOH HOH 536 B HOH 17 5 HOH HOH 537 B HOH 129 5 HOH HOH 538 B HOH 74 5 HOH HOH 539 B HOH 7 5 HOH HOH 540 B HOH 68 5 HOH HOH 541 B HOH 148 5 HOH HOH 542 B HOH 122 5 HOH HOH 543 B HOH 57 5 HOH HOH 544 B HOH 55 5 HOH HOH 545 B HOH 52 5 HOH HOH 546 B HOH 109 5 HOH HOH 547 B HOH 142 5 HOH HOH 548 B HOH 104 5 HOH HOH 549 B HOH 85 5 HOH HOH 550 B HOH 139 5 HOH HOH 551 B HOH 25 5 HOH HOH 552 B HOH 54 5 HOH HOH 553 B HOH 144 5 HOH HOH 554 B HOH 65 5 HOH HOH 101 D HOH 60 5 HOH HOH 102 D HOH 45 5 HOH HOH 103 D HOH 75 5 HOH HOH 104 D HOH 103 5 HOH HOH 105 D HOH 77 5 HOH HOH 106 D HOH 64 5 HOH HOH 107 D HOH 126 5 HOH HOH 108 D HOH 93 5 HOH HOH 109 D n 1 236 A GLY 237 n 2 GLY 237 A PRO 238 n 3 PRO 238 A SER 239 n 4 SER 239 A VAL 240 n 5 VAL 240 A PHE 241 n 6 PHE 241 A LEU 242 n 7 LEU 242 A PHE 243 n 8 PHE 243 A PRO 244 n 9 PRO 244 A PRO 245 n 10 PRO 245 A LYS 246 n 11 LYS 246 A PRO 247 n 12 PRO 247 A LYS 248 n 13 LYS 248 A ASP 249 n 14 ASP 249 A THR 250 n 15 THR 250 A LEU 251 n 16 LEU 251 A MET 252 n 17 MET 252 A ILE 253 n 18 ILE 253 A SER 254 n 19 SER 254 A ARG 255 n 20 ARG 255 A THR 256 n 21 THR 256 A PRO 257 n 22 PRO 257 A GLU 258 n 23 GLU 258 A VAL 259 n 24 VAL 259 A THR 260 n 25 THR 260 A CYS 261 n 26 CYS 261 A VAL 262 n 27 VAL 262 A VAL 263 n 28 VAL 263 A VAL 264 n 29 VAL 264 A ASP 265 n 30 ASP 265 A VAL 266 n 31 VAL 266 A SER 267 n 32 SER 267 A HIS 268 n 33 HIS 268 A GLU 269 n 34 GLU 269 A ASP 270 n 35 ASP 270 A PRO 271 n 36 PRO 271 A GLU 272 n 37 GLU 272 A VAL 273 n 38 VAL 273 A LYS 274 n 39 LYS 274 A PHE 275 n 40 PHE 275 A ASN 276 n 41 ASN 276 A TRP 277 n 42 TRP 277 A TYR 278 n 43 TYR 278 A VAL 279 n 44 VAL 279 A ASP 280 n 45 ASP 280 A GLY 281 n 46 GLY 281 A VAL 282 n 47 VAL 282 A GLU 283 n 48 GLU 283 A VAL 284 n 49 VAL 284 A HIS 285 n 50 HIS 285 A ASN 286 n 51 ASN 286 A ALA 287 n 52 ALA 287 A LYS 288 n 53 LYS 288 A THR 289 n 54 THR 289 A LYS 290 n 55 LYS 290 A PRO 291 n 56 PRO 291 A ARG 292 n 57 ARG 292 A GLU 293 n 58 GLU 293 A GLU 294 n 59 GLU 294 A GLN 295 n 60 GLN 295 A TYR 296 n 61 TYR 296 A ASN 297 n 62 ASN 297 A SER 298 n 63 SER 298 A THR 299 n 64 THR 299 A TYR 300 n 65 TYR 300 A ARG 301 n 66 ARG 301 A VAL 302 n 67 VAL 302 A VAL 303 n 68 VAL 303 A SER 304 n 69 SER 304 A VAL 305 n 70 VAL 305 A LEU 306 n 71 LEU 306 A THR 307 n 72 THR 307 A VAL 308 n 73 VAL 308 A LEU 309 n 74 LEU 309 A HIS 310 n 75 HIS 310 A GLN 311 n 76 GLN 311 A ASP 312 n 77 ASP 312 A TRP 313 n 78 TRP 313 A LEU 314 n 79 LEU 314 A ASN 315 n 80 ASN 315 A GLY 316 n 81 GLY 316 A LYS 317 n 82 LYS 317 A GLU 318 n 83 GLU 318 A TYR 319 n 84 TYR 319 A LYS 320 n 85 LYS 320 A CYS 321 n 86 CYS 321 A LYS 322 n 87 LYS 322 A VAL 323 n 88 VAL 323 A SER 324 n 89 SER 324 A ASN 325 n 90 ASN 325 A LYS 326 n 91 LYS 326 A ALA 327 n 92 ALA 327 A LEU 328 n 93 LEU 328 A PRO 329 n 94 PRO 329 A ALA 330 n 95 ALA 330 A PRO 331 n 96 PRO 331 A ILE 332 n 97 ILE 332 A GLU 333 n 98 GLU 333 A LYS 334 n 99 LYS 334 A THR 335 n 100 THR 335 A ILE 336 n 101 ILE 336 A SER 337 n 102 SER 337 A LYS 338 n 103 LYS 338 A ALA 339 n 104 ALA 339 A LYS 340 n 105 LYS 340 A GLY 341 n 106 GLY 341 A GLN 342 n 107 GLN 342 A PRO 343 n 108 PRO 343 A ARG 344 n 109 ARG 344 A GLU 345 n 110 GLU 345 A PRO 346 n 111 PRO 346 A GLN 347 n 112 GLN 347 A VAL 348 n 113 VAL 348 A TYR 349 n 114 TYR 349 A THR 350 n 115 THR 350 A LEU 351 n 116 LEU 351 A PRO 352 n 117 PRO 352 A PRO 353 n 118 PRO 353 A SER 354 n 119 SER 354 A ARG 355 n 120 ARG 355 A ASP 356 n 121 ASP 356 A GLU 357 n 122 GLU 357 A LEU 358 n 123 LEU 358 A THR 359 n 124 THR 359 A LYS 360 n 125 LYS 360 A ASN 361 n 126 ASN 361 A GLN 362 n 127 GLN 362 A VAL 363 n 128 VAL 363 A SER 364 n 129 SER 364 A LEU 365 n 130 LEU 365 A THR 366 n 131 THR 366 A CYS 367 n 132 CYS 367 A LEU 368 n 133 LEU 368 A VAL 369 n 134 VAL 369 A LYS 370 n 135 LYS 370 A GLY 371 n 136 GLY 371 A PHE 372 n 137 PHE 372 A TYR 373 n 138 TYR 373 A PRO 374 n 139 PRO 374 A SER 375 n 140 SER 375 A ASP 376 n 141 ASP 376 A ILE 377 n 142 ILE 377 A ALA 378 n 143 ALA 378 A VAL 379 n 144 VAL 379 A GLU 380 n 145 GLU 380 A TRP 381 n 146 TRP 381 A GLU 382 n 147 GLU 382 A SER 383 n 148 SER 383 A ASN 384 n 149 ASN 384 A GLY 385 n 150 GLY 385 A GLN 386 n 151 GLN 386 A PRO 387 n 152 PRO 387 A GLU 388 n 153 GLU 388 A ASN 389 n 154 ASN 389 A ASN 390 n 155 ASN 390 A TYR 391 n 156 TYR 391 A LYS 392 n 157 LYS 392 A THR 393 n 158 THR 393 A THR 394 n 159 THR 394 A PRO 395 n 160 PRO 395 A PRO 396 n 161 PRO 396 A VAL 397 n 162 VAL 397 A LEU 398 n 163 LEU 398 A ASP 399 n 164 ASP 399 A SER 400 n 165 SER 400 A ASP 401 n 166 ASP 401 A GLY 402 n 167 GLY 402 A SER 403 n 168 SER 403 A PHE 404 n 169 PHE 404 A PHE 405 n 170 PHE 405 A LEU 406 n 171 LEU 406 A TYR 407 n 172 TYR 407 A SER 408 n 173 SER 408 A LYS 409 n 174 LYS 409 A LEU 410 n 175 LEU 410 A THR 411 n 176 THR 411 A VAL 412 n 177 VAL 412 A ASP 413 n 178 ASP 413 A LYS 414 n 179 LYS 414 A SER 415 n 180 SER 415 A ARG 416 n 181 ARG 416 A TRP 417 n 182 TRP 417 A GLN 418 n 183 GLN 418 A GLN 419 n 184 GLN 419 A GLY 420 n 185 GLY 420 A ASN 421 n 186 ASN 421 A VAL 422 n 187 VAL 422 A PHE 423 n 188 PHE 423 A SER 424 n 189 SER 424 A CYS 425 n 190 CYS 425 A SER 426 n 191 SER 426 A VAL 427 n 192 VAL 427 A MET 428 n 193 MET 428 A HIS 429 n 194 HIS 429 A GLU 430 n 195 GLU 430 A ALA 431 n 196 ALA 431 A LEU 432 n 197 LEU 432 A HIS 433 n 198 HIS 433 A ASN 434 n 199 ASN 434 A HIS 435 n 200 HIS 435 A TYR 436 n 201 TYR 436 A THR 437 n 202 THR 437 A GLN 438 n 203 GLN 438 A LYS 439 n 204 LYS 439 A SER 440 n 205 SER 440 A LEU 441 n 206 LEU 441 A SER 442 n 207 SER 442 A LEU 443 n 208 LEU 443 A SER 444 n 209 SER 444 A n 210 445 A n 211 446 A n 212 447 A PHE 6 n 1 PHE 6 C ASN 7 n 2 ASN 7 C MET 8 n 3 MET 8 C GLN 9 n 4 GLN 9 C CYS 10 n 5 CYS 10 C GLN 11 n 6 GLN 11 C ARG 12 n 7 ARG 12 C ARG 13 n 8 ARG 13 C PHE 14 n 9 PHE 14 C TYR 15 n 10 TYR 15 C GLU 16 n 11 GLU 16 C ALA 17 n 12 ALA 17 C LEU 18 n 13 LEU 18 C HIS 19 n 14 HIS 19 C ASP 20 n 15 ASP 20 C PRO 21 n 16 PRO 21 C ASN 22 n 17 ASN 22 C LEU 23 n 18 LEU 23 C ASN 24 n 19 ASN 24 C GLU 25 n 20 GLU 25 C GLU 26 n 21 GLU 26 C GLN 27 n 22 GLN 27 C ARG 28 n 23 ARG 28 C ASN 29 n 24 ASN 29 C ALA 30 n 25 ALA 30 C LYS 31 n 26 LYS 31 C ILE 32 n 27 ILE 32 C LYS 33 n 28 LYS 33 C SER 34 n 29 SER 34 C ILE 35 n 30 ILE 35 C ARG 36 n 31 ARG 36 C ASP 37 n 32 ASP 37 C ASP 38 n 33 ASP 38 C CYS 39 n 34 CYS 39 C GLY 236 n 1 GLY 236 B GLY 237 n 2 GLY 237 B PRO 238 n 3 PRO 238 B SER 239 n 4 SER 239 B VAL 240 n 5 VAL 240 B PHE 241 n 6 PHE 241 B LEU 242 n 7 LEU 242 B PHE 243 n 8 PHE 243 B PRO 244 n 9 PRO 244 B PRO 245 n 10 PRO 245 B LYS 246 n 11 LYS 246 B PRO 247 n 12 PRO 247 B LYS 248 n 13 LYS 248 B ASP 249 n 14 ASP 249 B THR 250 n 15 THR 250 B LEU 251 n 16 LEU 251 B MET 252 n 17 MET 252 B ILE 253 n 18 ILE 253 B SER 254 n 19 SER 254 B ARG 255 n 20 ARG 255 B THR 256 n 21 THR 256 B PRO 257 n 22 PRO 257 B GLU 258 n 23 GLU 258 B VAL 259 n 24 VAL 259 B THR 260 n 25 THR 260 B CYS 261 n 26 CYS 261 B VAL 262 n 27 VAL 262 B VAL 263 n 28 VAL 263 B VAL 264 n 29 VAL 264 B ASP 265 n 30 ASP 265 B VAL 266 n 31 VAL 266 B SER 267 n 32 SER 267 B HIS 268 n 33 HIS 268 B GLU 269 n 34 GLU 269 B ASP 270 n 35 ASP 270 B PRO 271 n 36 PRO 271 B GLU 272 n 37 GLU 272 B VAL 273 n 38 VAL 273 B LYS 274 n 39 LYS 274 B PHE 275 n 40 PHE 275 B ASN 276 n 41 ASN 276 B TRP 277 n 42 TRP 277 B TYR 278 n 43 TYR 278 B VAL 279 n 44 VAL 279 B ASP 280 n 45 ASP 280 B GLY 281 n 46 GLY 281 B VAL 282 n 47 VAL 282 B GLU 283 n 48 GLU 283 B VAL 284 n 49 VAL 284 B HIS 285 n 50 HIS 285 B ASN 286 n 51 ASN 286 B ALA 287 n 52 ALA 287 B LYS 288 n 53 LYS 288 B THR 289 n 54 THR 289 B LYS 290 n 55 LYS 290 B PRO 291 n 56 PRO 291 B ARG 292 n 57 ARG 292 B GLU 293 n 58 GLU 293 B GLU 294 n 59 GLU 294 B GLN 295 n 60 GLN 295 B TYR 296 n 61 TYR 296 B ASN 297 n 62 ASN 297 B SER 298 n 63 SER 298 B THR 299 n 64 THR 299 B TYR 300 n 65 TYR 300 B ARG 301 n 66 ARG 301 B VAL 302 n 67 VAL 302 B VAL 303 n 68 VAL 303 B SER 304 n 69 SER 304 B VAL 305 n 70 VAL 305 B LEU 306 n 71 LEU 306 B THR 307 n 72 THR 307 B VAL 308 n 73 VAL 308 B LEU 309 n 74 LEU 309 B HIS 310 n 75 HIS 310 B GLN 311 n 76 GLN 311 B ASP 312 n 77 ASP 312 B TRP 313 n 78 TRP 313 B LEU 314 n 79 LEU 314 B ASN 315 n 80 ASN 315 B GLY 316 n 81 GLY 316 B LYS 317 n 82 LYS 317 B GLU 318 n 83 GLU 318 B TYR 319 n 84 TYR 319 B LYS 320 n 85 LYS 320 B CYS 321 n 86 CYS 321 B LYS 322 n 87 LYS 322 B VAL 323 n 88 VAL 323 B SER 324 n 89 SER 324 B ASN 325 n 90 ASN 325 B LYS 326 n 91 LYS 326 B ALA 327 n 92 ALA 327 B LEU 328 n 93 LEU 328 B PRO 329 n 94 PRO 329 B ALA 330 n 95 ALA 330 B PRO 331 n 96 PRO 331 B ILE 332 n 97 ILE 332 B GLU 333 n 98 GLU 333 B LYS 334 n 99 LYS 334 B THR 335 n 100 THR 335 B ILE 336 n 101 ILE 336 B SER 337 n 102 SER 337 B LYS 338 n 103 LYS 338 B ALA 339 n 104 ALA 339 B LYS 340 n 105 LYS 340 B GLY 341 n 106 GLY 341 B GLN 342 n 107 GLN 342 B PRO 343 n 108 PRO 343 B ARG 344 n 109 ARG 344 B GLU 345 n 110 GLU 345 B PRO 346 n 111 PRO 346 B GLN 347 n 112 GLN 347 B VAL 348 n 113 VAL 348 B TYR 349 n 114 TYR 349 B THR 350 n 115 THR 350 B LEU 351 n 116 LEU 351 B PRO 352 n 117 PRO 352 B PRO 353 n 118 PRO 353 B SER 354 n 119 SER 354 B ARG 355 n 120 ARG 355 B ASP 356 n 121 ASP 356 B GLU 357 n 122 GLU 357 B LEU 358 n 123 LEU 358 B THR 359 n 124 THR 359 B LYS 360 n 125 LYS 360 B ASN 361 n 126 ASN 361 B GLN 362 n 127 GLN 362 B VAL 363 n 128 VAL 363 B SER 364 n 129 SER 364 B LEU 365 n 130 LEU 365 B THR 366 n 131 THR 366 B CYS 367 n 132 CYS 367 B LEU 368 n 133 LEU 368 B VAL 369 n 134 VAL 369 B LYS 370 n 135 LYS 370 B GLY 371 n 136 GLY 371 B PHE 372 n 137 PHE 372 B TYR 373 n 138 TYR 373 B PRO 374 n 139 PRO 374 B SER 375 n 140 SER 375 B ASP 376 n 141 ASP 376 B ILE 377 n 142 ILE 377 B ALA 378 n 143 ALA 378 B VAL 379 n 144 VAL 379 B GLU 380 n 145 GLU 380 B TRP 381 n 146 TRP 381 B GLU 382 n 147 GLU 382 B SER 383 n 148 SER 383 B ASN 384 n 149 ASN 384 B GLY 385 n 150 GLY 385 B GLN 386 n 151 GLN 386 B PRO 387 n 152 PRO 387 B GLU 388 n 153 GLU 388 B ASN 389 n 154 ASN 389 B ASN 390 n 155 ASN 390 B TYR 391 n 156 TYR 391 B LYS 392 n 157 LYS 392 B THR 393 n 158 THR 393 B THR 394 n 159 THR 394 B PRO 395 n 160 PRO 395 B PRO 396 n 161 PRO 396 B VAL 397 n 162 VAL 397 B LEU 398 n 163 LEU 398 B ASP 399 n 164 ASP 399 B SER 400 n 165 SER 400 B ASP 401 n 166 ASP 401 B GLY 402 n 167 GLY 402 B SER 403 n 168 SER 403 B PHE 404 n 169 PHE 404 B PHE 405 n 170 PHE 405 B LEU 406 n 171 LEU 406 B TYR 407 n 172 TYR 407 B SER 408 n 173 SER 408 B LYS 409 n 174 LYS 409 B LEU 410 n 175 LEU 410 B THR 411 n 176 THR 411 B VAL 412 n 177 VAL 412 B ASP 413 n 178 ASP 413 B LYS 414 n 179 LYS 414 B SER 415 n 180 SER 415 B ARG 416 n 181 ARG 416 B TRP 417 n 182 TRP 417 B GLN 418 n 183 GLN 418 B GLN 419 n 184 GLN 419 B GLY 420 n 185 GLY 420 B ASN 421 n 186 ASN 421 B VAL 422 n 187 VAL 422 B PHE 423 n 188 PHE 423 B SER 424 n 189 SER 424 B CYS 425 n 190 CYS 425 B SER 426 n 191 SER 426 B VAL 427 n 192 VAL 427 B MET 428 n 193 MET 428 B HIS 429 n 194 HIS 429 B GLU 430 n 195 GLU 430 B ALA 431 n 196 ALA 431 B LEU 432 n 197 LEU 432 B HIS 433 n 198 HIS 433 B ASN 434 n 199 ASN 434 B HIS 435 n 200 HIS 435 B TYR 436 n 201 TYR 436 B THR 437 n 202 THR 437 B GLN 438 n 203 GLN 438 B LYS 439 n 204 LYS 439 B SER 440 n 205 SER 440 B LEU 441 n 206 LEU 441 B SER 442 n 207 SER 442 B LEU 443 n 208 LEU 443 B n 209 444 B n 210 445 B n 211 446 B n 212 447 B PHE 6 n 1 PHE 6 D ASN 7 n 2 ASN 7 D MET 8 n 3 MET 8 D GLN 9 n 4 GLN 9 D CYS 10 n 5 CYS 10 D GLN 11 n 6 GLN 11 D ARG 12 n 7 ARG 12 D ARG 13 n 8 ARG 13 D PHE 14 n 9 PHE 14 D TYR 15 n 10 TYR 15 D GLU 16 n 11 GLU 16 D ALA 17 n 12 ALA 17 D LEU 18 n 13 LEU 18 D HIS 19 n 14 HIS 19 D ASP 20 n 15 ASP 20 D PRO 21 n 16 PRO 21 D ASN 22 n 17 ASN 22 D LEU 23 n 18 LEU 23 D ASN 24 n 19 ASN 24 D GLU 25 n 20 GLU 25 D GLU 26 n 21 GLU 26 D GLN 27 n 22 GLN 27 D ARG 28 n 23 ARG 28 D ASN 29 n 24 ASN 29 D ALA 30 n 25 ALA 30 D LYS 31 n 26 LYS 31 D ILE 32 n 27 ILE 32 D LYS 33 n 28 LYS 33 D SER 34 n 29 SER 34 D ILE 35 n 30 ILE 35 D ARG 36 n 31 ARG 36 D ASP 37 n 32 ASP 37 D ASP 38 n 33 ASP 38 D CYS 39 n 34 CYS 39 D author_and_software_defined_assembly PISA 4 tetrameric 10080 42 24760 A ASN 297 GLYCOSYLATION SITE A ASN 62 ASN B ASN 297 GLYCOSYLATION SITE C ASN 62 ASN 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N PHE 243 A N PHE 8 A O THR 260 A O THR 25 A N VAL 263 A N VAL 28 A O VAL 302 A O VAL 67 A O VAL 303 A O VAL 68 A N LYS 290 A N LYS 55 A O VAL 282 A O VAL 47 A N VAL 279 A N VAL 44 A N LYS 274 A N LYS 39 A O SER 324 A O SER 89 A N CYS 321 A N CYS 86 A O LYS 334 A O LYS 99 A N TYR 349 A N TYR 114 A O LEU 368 A O LEU 133 A N LEU 365 A N LEU 130 A O LEU 410 A O LEU 175 A O LYS 409 A O LYS 174 A N LYS 392 A N LYS 157 A N TYR 349 A N TYR 114 A O LEU 368 A O LEU 133 A N LEU 365 A N LEU 130 A O LEU 410 A O LEU 175 A O PHE 405 A O PHE 170 A N VAL 397 A N VAL 162 A O GLN 386 A O GLN 151 A N SER 383 A N SER 148 A N ALA 378 A N ALA 143 A O MET 428 A O MET 193 A N CYS 425 A N CYS 190 A O LYS 439 A O LYS 204 B N PHE 243 C N PHE 8 B O THR 260 C O THR 25 B N VAL 259 C N VAL 24 B O LEU 306 C O LEU 71 B O VAL 305 C O VAL 70 B N LYS 288 C N LYS 53 B O VAL 282 C O VAL 47 B N VAL 279 C N VAL 44 B N LYS 274 C N LYS 39 B O SER 324 C O SER 89 B N VAL 323 C N VAL 88 B O ILE 332 C O ILE 97 B N LEU 351 C N LEU 116 B O THR 366 C O THR 131 B N VAL 363 C N VAL 128 B O VAL 412 C O VAL 177 B O LYS 409 C O LYS 174 B N LYS 392 C N LYS 157 B N LEU 351 C N LEU 116 B O THR 366 C O THR 131 B N VAL 363 C N VAL 128 B O VAL 412 C O VAL 177 B O PHE 405 C O PHE 170 B N VAL 397 C N VAL 162 B O GLN 386 C O GLN 151 B N SER 383 C N SER 148 B N GLU 380 C N GLU 145 B O SER 426 C O SER 191 B N PHE 423 C N PHE 188 B O LEU 441 C O LEU 206 1 A GLY 236 A GLY 1 1 Y 1 A PRO 445 A PRO 210 1 Y 1 A GLY 446 A GLY 211 1 Y 1 A LYS 447 A LYS 212 1 Y 1 B SER 444 C SER 209 1 Y 1 B PRO 445 C PRO 210 1 Y 1 B GLY 446 C GLY 211 1 Y 1 B LYS 447 C LYS 212 1 Y 1 F C1 FUC 8 WRONG HAND 1 A ASP 265 70.94 33.94 1 A ASP 270 -155.34 51.83 1 A ARG 292 -44.79 163.81 1 A TYR 296 -47.31 -15.82 1 A SER 298 71.18 31.06 1 A THR 299 -129.47 -162.06 1 A SER 383 -171.20 144.08 1 B ASP 270 -101.68 73.93 1 B PRO 374 -69.27 -179.51 PROTEIN TOPHCSD PARAM3MOD.CHO TOPH3MOD.CHO PARAM19.SOL TOPH19.SOL 42.9 0.00 0.00 0.00 0.00 0.00 0.00 BULK SOLVENT MODEL USED 0.286 0.006 0.216 0.242 0.216 2.30 20.00 2671 27051 26838 10.0 98.9 RANDOM 10000000.00 0.010000 1 RESTRAINED THROUGHOUT 0.2 MOLECULAR REPLACEMENT PDB Entry 1L6X Engh & Huber 0.42 0.31 20.00 0.39 0.37 2.30 20.00 140 4246 198 0 3908 0.010 1.5 29.1 0.81 3.71 5.00 5.31 5.50 5.51 5.50 7.81 6.50 0.379 0.018 0.354 2.44 425 3759 6 10.2 94.3 31.5 2.3 99.0 1OQO 27051 27051 -1 -1 1 4 99.7 2.29 2.37 1 95.4 refinement X-PLOR 98.1 data reduction DENZO data scaling SCALEPACK phasing AMoRE Complex between G0 version of an Fc bound to a minimized version of Protein A called Mini-Z 1 N N 2 N N 1 N N 2 N N 3 N N 4 N N 5 N N 5 N N 5 N N 5 N N A LYS 246 A LYS 11 HELX_P A MET 252 A MET 17 1 1 7 A LEU 309 A LEU 74 HELX_P A ASN 315 A ASN 80 1 2 7 A SER 354 A SER 119 HELX_P A LEU 358 A LEU 123 5 3 5 A LYS 414 A LYS 179 HELX_P A GLN 419 A GLN 184 1 4 6 A LEU 432 A LEU 197 HELX_P A TYR 436 A TYR 201 5 5 5 C ASN 7 B ASN 2 HELX_P C ASP 20 B ASP 15 1 6 14 C ASN 24 B ASN 19 HELX_P C ASP 38 B ASP 33 1 7 15 B LYS 246 C LYS 11 HELX_P B MET 252 C MET 17 1 8 7 B LEU 309 C LEU 74 HELX_P B ASN 315 C ASN 80 1 9 7 B SER 354 C SER 119 HELX_P B LEU 358 C LEU 123 5 10 5 B LYS 414 C LYS 179 HELX_P B GLN 419 C GLN 184 1 11 6 B LEU 432 C LEU 197 HELX_P B TYR 436 C TYR 201 5 12 5 D ASN 7 D ASN 2 HELX_P D ASP 20 D ASP 15 1 13 14 D ASN 24 D ASN 19 HELX_P D ASP 38 D ASP 33 1 14 15 disulf 2.017 A CYS 261 A SG CYS 26 1_555 A CYS 321 A SG CYS 86 1_555 disulf 2.018 A CYS 367 A SG CYS 132 1_555 A CYS 425 A SG CYS 190 1_555 disulf 2.035 C CYS 10 B SG CYS 5 1_555 C CYS 39 B SG CYS 34 1_555 disulf 2.038 B CYS 261 C SG CYS 26 1_555 B CYS 321 C SG CYS 86 1_555 disulf 2.019 B CYS 367 C SG CYS 132 1_555 B CYS 425 C SG CYS 190 1_555 disulf 2.031 D CYS 10 D SG CYS 5 1_555 D CYS 39 D SG CYS 34 1_555 covale 1.451 one N-Glycosylation A ASN 297 A ND2 ASN 62 1_555 E NAG 1 E C1 NAG 1_555 covale 1.450 one N-Glycosylation B ASN 297 C ND2 ASN 62 1_555 F NAG 1 F C1 NAG 1_555 covale 1.388 both E NAG 1 E O4 NAG 1_555 E NAG 2 E C1 NAG 1_555 covale 1.402 both E NAG 1 E O6 NAG 1_555 E FUL 8 E C1 FUL 1_555 covale 1.386 both E NAG 2 E O4 NAG 1_555 E BMA 3 E C1 BMA 1_555 covale 1.381 both E BMA 3 E O3 BMA 1_555 E MAN 4 E C1 MAN 1_555 covale 1.388 both E BMA 3 E O6 BMA 1_555 E MAN 6 E C1 MAN 1_555 covale 1.392 both E MAN 4 E O2 MAN 1_555 E NAG 5 E C1 NAG 1_555 covale 1.375 both E MAN 6 E O2 MAN 1_555 E NAG 7 E C1 NAG 1_555 covale 1.393 both F NAG 1 F O4 NAG 1_555 F NAG 2 F C1 NAG 1_555 covale 1.395 both F NAG 1 F O6 NAG 1_555 F FUC 8 F C1 FUC 1_555 covale 1.381 both F NAG 2 F O4 NAG 1_555 F BMA 3 F C1 BMA 1_555 covale 1.376 both F BMA 3 F O3 BMA 1_555 F MAN 4 F C1 MAN 1_555 covale 1.391 both F BMA 3 F O6 BMA 1_555 F MAN 6 F C1 MAN 1_555 covale 1.381 both F MAN 4 F O2 MAN 1_555 F NDG 5 F C1 NDG 1_555 covale 1.382 both F MAN 6 F O2 MAN 1_555 F NAG 7 F C1 NAG 1_555 IMMUNE SYSTEM Antibody, Glycosylation, Oligosaccharides, IgG, Fc Fragment, Z34C, Protein A, IMMUNE SYSTEM A TYR 373 A TYR 138 1 A PRO 374 A PRO 139 -0.26 B TYR 373 C TYR 138 1 B PRO 374 C PRO 139 -0.45 AAC82527 GB 1 118 184747 GGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLN GKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTP PVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK 1OQO PDB 2 1OQO 118 329 1OQO 236 447 184747 A 1 1 212 118 329 1OQO 236 447 184747 B 1 1 212 6 39 1OQO 6 39 1OQO C 2 1 34 6 39 1OQO 6 39 1OQO D 2 1 34 4 4 4 4 4 4 4 4 4 4 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A SER 239 A SER 4 A PHE 243 A PHE 8 A GLU 258 A GLU 23 A VAL 264 A VAL 29 A ARG 301 A ARG 66 A THR 307 A THR 72 A LYS 288 A LYS 53 A LYS 290 A LYS 55 A VAL 282 A VAL 47 A VAL 284 A VAL 49 A LYS 274 A LYS 39 A VAL 279 A VAL 44 A TYR 319 A TYR 84 A SER 324 A SER 89 A ILE 332 A ILE 97 A ILE 336 A ILE 101 A GLN 347 A GLN 112 A LEU 351 A LEU 116 A GLN 362 A GLN 127 A PHE 372 A PHE 137 A PHE 404 A PHE 169 A ASP 413 A ASP 178 A TYR 391 A TYR 156 A THR 393 A THR 158 A GLN 347 A GLN 112 A LEU 351 A LEU 116 A GLN 362 A GLN 127 A PHE 372 A PHE 137 A PHE 404 A PHE 169 A ASP 413 A ASP 178 A VAL 397 A VAL 162 A LEU 398 A LEU 163 A GLN 386 A GLN 151 A GLU 388 A GLU 153 A ALA 378 A ALA 143 A SER 383 A SER 148 A PHE 423 A PHE 188 A MET 428 A MET 193 A THR 437 A THR 202 A LEU 441 A LEU 206 B SER 239 C SER 4 B PHE 243 C PHE 8 B GLU 258 C GLU 23 B VAL 266 C VAL 31 B TYR 300 C TYR 65 B THR 307 C THR 72 B LYS 288 C LYS 53 B THR 289 C THR 54 B VAL 282 C VAL 47 B VAL 284 C VAL 49 B VAL 273 C VAL 38 B VAL 279 C VAL 44 B TYR 319 C TYR 84 B ASN 325 C ASN 90 B ILE 332 C ILE 97 B ILE 336 C ILE 101 B GLN 347 C GLN 112 B LEU 351 C LEU 116 B GLN 362 C GLN 127 B PHE 372 C PHE 137 B PHE 404 C PHE 169 B ASP 413 C ASP 178 B TYR 391 C TYR 156 B THR 393 C THR 158 B GLN 347 C GLN 112 B LEU 351 C LEU 116 B GLN 362 C GLN 127 B PHE 372 C PHE 137 B PHE 404 C PHE 169 B ASP 413 C ASP 178 B VAL 397 C VAL 162 B LEU 398 C LEU 163 B GLN 386 C GLN 151 B GLU 388 C GLU 153 B ALA 378 C ALA 143 B SER 383 C SER 148 B PHE 423 C PHE 188 B MET 428 C MET 193 B THR 437 C THR 202 B LEU 441 C LEU 206 18 P 21 21 2