0.008693
0.000000
0.000000
0.000000
0.006896
0.000000
0.000000
0.000000
0.025281
0.00000
0.00000
0.00000
Bell, J.K.
Goetz, D.H.
Mahrus, S.
Harris, J.L.
Fletterick, R.J.
Craik, C.S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
115.034
145.022
39.555
C21 H34 Cl N6 O3 1
453.986
D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide
PPACK
peptide-like
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
R
C
N
3
N
C
N
4
N
O
N
5
N
C
Y
6
N
C
Y
7
N
C
Y
8
N
C
Y
9
N
C
Y
10
N
C
Y
11
N
C
N
12
N
N
N
13
S
C
N
14
N
C
N
15
N
O
N
16
N
C
N
17
N
C
N
18
N
C
N
19
N
N
N
20
S
C
N
21
S
C
N
22
N
O
N
23
N
C
N
24
N
C
N
25
N
C
N
26
N
N
N
27
N
C
N
28
N
N
N
29
N
N
N
30
N
C
N
31
N
CL
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
N
N
67
S
C
N
68
N
C
N
69
N
O
N
70
N
C
N
71
N
O
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
N
N
80
S
C
N
81
N
C
N
82
N
O
N
83
N
C
N
84
N
C
N
85
N
C
N
86
N
N
N
87
N
C
N
88
N
N
N
89
N
N
N
90
N
O
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
N
N
107
S
C
N
108
N
C
N
109
N
O
N
110
N
C
N
111
N
C
N
112
N
O
N
113
N
N
N
114
N
O
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
S
C
N
125
N
C
N
126
N
O
N
127
N
C
N
128
N
C
N
129
N
O
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
N
N
140
R
C
N
141
N
C
N
142
N
O
N
143
N
C
N
144
N
S
N
145
N
O
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
N
N
154
S
C
N
155
N
C
N
156
N
O
N
157
N
C
N
158
N
C
N
159
N
C
N
160
N
O
N
161
N
N
N
162
N
O
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
N
N
174
S
C
N
175
N
C
N
176
N
O
N
177
N
C
N
178
N
C
N
179
N
C
N
180
N
O
N
181
N
O
N
182
N
O
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
N
N
193
N
C
N
194
N
C
N
195
N
O
N
196
N
O
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
N
N
203
S
C
N
204
N
C
N
205
N
O
N
206
N
C
Y
207
N
C
Y
208
N
N
Y
209
N
C
Y
210
N
C
Y
211
N
N
N
212
N
O
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
O
N
224
N
H
N
225
N
H
N
226
N
N
N
227
S
C
N
228
N
C
N
229
N
O
N
230
S
C
N
231
N
C
N
232
N
C
N
233
N
C
N
234
N
O
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
N
N
249
S
C
N
250
N
C
N
251
N
O
N
252
N
C
N
253
N
C
N
254
N
C
N
255
N
C
N
256
N
O
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
N
N
271
S
C
N
272
N
C
N
273
N
O
N
274
N
C
N
275
N
C
N
276
N
C
N
277
N
C
N
278
N
N
N
279
N
O
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
N
N
296
S
C
N
297
N
C
N
298
N
O
N
299
N
C
N
300
N
C
N
301
N
S
N
302
N
C
N
303
N
O
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
N
N
316
S
C
N
317
N
C
N
318
N
O
N
319
N
C
Y
320
N
C
Y
321
N
C
Y
322
N
C
Y
323
N
C
Y
324
N
C
Y
325
N
C
N
326
N
O
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
N
N
339
S
C
N
340
N
C
N
341
N
O
N
342
N
C
N
343
N
C
N
344
N
C
N
345
N
O
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
N
N
356
S
C
N
357
N
C
N
358
N
O
N
359
N
C
N
360
N
O
N
361
N
O
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
S
N
370
N
O
N
371
N
O
N
372
N
O
N
373
N
O
N
374
N
N
N
375
S
C
N
376
N
C
N
377
N
O
N
378
R
C
N
379
N
O
N
380
N
C
N
381
N
O
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
N
N
392
S
C
N
393
N
C
N
394
N
O
N
395
N
C
Y
396
N
C
Y
397
N
C
Y
398
N
C
Y
399
N
N
Y
400
N
C
Y
401
N
C
Y
402
N
C
Y
403
N
C
Y
404
N
C
N
405
N
O
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
N
N
419
S
C
N
420
N
C
N
421
N
O
N
422
N
C
Y
423
N
C
Y
424
N
C
Y
425
N
C
Y
426
N
C
Y
427
N
C
Y
428
N
C
N
429
N
O
N
430
N
O
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
N
N
443
S
C
N
444
N
C
N
445
N
O
N
446
N
C
N
447
N
C
N
448
N
C
N
449
N
O
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
Y
12
N
doub
Y
13
N
sing
Y
14
N
sing
N
15
N
sing
Y
16
N
doub
N
17
N
sing
Y
18
N
doub
N
19
N
sing
Y
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
doub
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
doub
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
doub
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
doub
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
doub
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
doub
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
doub
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
doub
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
doub
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
doub
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
doub
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
doub
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
doub
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
doub
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
doub
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
Y
206
N
sing
Y
207
N
doub
Y
208
N
doub
N
209
N
sing
Y
210
N
sing
N
211
N
sing
Y
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
doub
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
doub
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
doub
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
Y
314
N
doub
Y
315
N
sing
Y
316
N
sing
N
317
N
sing
Y
318
N
doub
N
319
N
sing
Y
320
N
doub
N
321
N
sing
Y
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
doub
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
doub
N
357
N
doub
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
doub
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
doub
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
Y
387
N
doub
Y
388
N
sing
Y
389
N
sing
N
390
N
sing
Y
391
N
doub
Y
392
N
sing
Y
393
N
sing
N
394
N
sing
Y
395
N
sing
Y
396
N
doub
N
397
N
sing
Y
398
N
doub
N
399
N
sing
Y
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
doub
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
Y
415
N
doub
Y
416
N
sing
Y
417
N
sing
N
418
N
sing
Y
419
N
doub
N
420
N
sing
Y
421
N
doub
N
422
N
sing
Y
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
doub
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
US
Nat.Struct.Biol.
NSBIEW
2024
1072-8368
10
527
534
10.1038/nsb944
12819769
The oligomeric structure of human granzyme A is a determinant of its extended substrate specificity.
2003
10.2210/pdb1orf/pdb
pdb_00001orf
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2002-06-02
ADSC QUANTUM 4
SINGLE WAVELENGTH
M
x-ray
1
1
1.0
5.0.3
ALS
1
SYNCHROTRON
ALS BEAMLINE 5.0.3
25870.066
Granzyme A
3.4.21.78
N170E
1
man
polymer
solid phase peptide synthesis
453.986
D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide
1
syn
non-polymer
96.063
SULFATE ION
1
syn
non-polymer
18.015
water
128
nat
water
Cytotoxic T-lymphocyte proteinase 1, Hanukkah factor, H factor, HF, Granzyme 1, CTL tryptase, Fragmentin 1
no
no
IIGGNEVTPHSRPYMVLLSLDRKTICAGALIAKDWVLTAAHCNLNKRSQVILGAHSITREEPTKQIMLVKKEFPYPCYDP
ATREGDLKLLQLTEKAKINKYVTILHLPKKGDDVKPGTMCQVAGWGRTHNSASWSDTLREVEITIIDRKVCNDRNHYNFN
PVIGMNMVCAGSLRGGRDSCNGDSGSPLLCEGVFRGVTSFGLENKCGDPRGPGVYILLSKKHLNWIIMTIKGAV
IIGGNEVTPHSRPYMVLLSLDRKTICAGALIAKDWVLTAAHCNLNKRSQVILGAHSITREEPTKQIMLVKKEFPYPCYDP
ATREGDLKLLQLTEKAKINKYVTILHLPKKGDDVKPGTMCQVAGWGRTHNSASWSDTLREVEITIIDRKVCNDRNHYNFN
PVIGMNMVCAGSLRGGRDSCNGDSGSPLLCEGVFRGVTSFGLENKCGDPRGPGVYILLSKKHLNWIIMTIKGAV
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
sample
GZMA
9606
Homo sapiens
4922
Pichia pastoris
X33
plasmid
pPicZalphaA
1
3.14
60.78
VAPOR DIFFUSION, HANGING DROP
8.5
Tris pH 8.5, PEG 4000, lithium sulfate, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
database_2
struct_conn
struct_ref_seq_dif
struct_site
chem_comp_atom
chem_comp_bond
pdbx_initial_refinement_model
entity
pdbx_entity_src_syn
repository
Initial release
Version format compliance
Atomic model
Database references
Derived calculations
Non-polymer description
Structure summary
Version format compliance
Other
Database references
Derived calculations
Data collection
Refinement description
Source and taxonomy
Structure summary
1
0
2003-07-01
1
1
2008-04-29
1
2
2011-07-13
1
3
2013-02-27
1
4
2021-10-27
1
5
2023-08-16
1
6
2024-03-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
_entity.details
RCSB
Y
RCSB
2003-03-12
REL
0G6
D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide
SO4
SULFATE ION
HOH
water
THE INHIBITOR IS COVALENTLY CONNECTED TO ACTIVE_SITE
RESIDUES:
1) VIA A HEMIKETAL GROUP TO OG SER A 195,
2) VIA A METHYLENE GROUP TO NE2 HIS A 57.
1DST
PDB
experimental model
Inhibitor
D-Phe-Pro-Arg-CH2Cl
Peptide-like
DPN
1
2
0G6
0G6
1
A
SO4
1
3
SO4
SO4
247
A
HOH
3
4
HOH
HOH
248
A
HOH
4
4
HOH
HOH
249
A
HOH
5
4
HOH
HOH
250
A
HOH
6
4
HOH
HOH
251
A
HOH
7
4
HOH
HOH
252
A
HOH
8
4
HOH
HOH
253
A
HOH
9
4
HOH
HOH
254
A
HOH
10
4
HOH
HOH
255
A
HOH
11
4
HOH
HOH
256
A
HOH
12
4
HOH
HOH
257
A
HOH
13
4
HOH
HOH
258
A
HOH
14
4
HOH
HOH
259
A
HOH
15
4
HOH
HOH
260
A
HOH
16
4
HOH
HOH
261
A
HOH
17
4
HOH
HOH
262
A
HOH
18
4
HOH
HOH
263
A
HOH
19
4
HOH
HOH
264
A
HOH
20
4
HOH
HOH
265
A
HOH
21
4
HOH
HOH
266
A
HOH
22
4
HOH
HOH
267
A
HOH
23
4
HOH
HOH
268
A
HOH
25
4
HOH
HOH
269
A
HOH
26
4
HOH
HOH
270
A
HOH
27
4
HOH
HOH
271
A
HOH
28
4
HOH
HOH
272
A
HOH
29
4
HOH
HOH
273
A
HOH
30
4
HOH
HOH
274
A
HOH
31
4
HOH
HOH
275
A
HOH
32
4
HOH
HOH
276
A
HOH
33
4
HOH
HOH
277
A
HOH
34
4
HOH
HOH
278
A
HOH
35
4
HOH
HOH
279
A
HOH
36
4
HOH
HOH
280
A
HOH
37
4
HOH
HOH
281
A
HOH
38
4
HOH
HOH
282
A
HOH
39
4
HOH
HOH
283
A
HOH
40
4
HOH
HOH
284
A
HOH
41
4
HOH
HOH
285
A
HOH
42
4
HOH
HOH
286
A
HOH
43
4
HOH
HOH
287
A
HOH
44
4
HOH
HOH
288
A
HOH
45
4
HOH
HOH
289
A
HOH
46
4
HOH
HOH
290
A
HOH
47
4
HOH
HOH
291
A
HOH
48
4
HOH
HOH
292
A
HOH
49
4
HOH
HOH
293
A
HOH
50
4
HOH
HOH
294
A
HOH
51
4
HOH
HOH
295
A
HOH
52
4
HOH
HOH
296
A
HOH
54
4
HOH
HOH
297
A
HOH
55
4
HOH
HOH
298
A
HOH
56
4
HOH
HOH
299
A
HOH
57
4
HOH
HOH
300
A
HOH
58
4
HOH
HOH
301
A
HOH
59
4
HOH
HOH
302
A
HOH
60
4
HOH
HOH
303
A
HOH
61
4
HOH
HOH
304
A
HOH
62
4
HOH
HOH
305
A
HOH
64
4
HOH
HOH
306
A
HOH
65
4
HOH
HOH
307
A
HOH
66
4
HOH
HOH
308
A
HOH
67
4
HOH
HOH
309
A
HOH
68
4
HOH
HOH
310
A
HOH
69
4
HOH
HOH
311
A
HOH
70
4
HOH
HOH
312
A
HOH
71
4
HOH
HOH
313
A
HOH
72
4
HOH
HOH
314
A
HOH
73
4
HOH
HOH
315
A
HOH
74
4
HOH
HOH
316
A
HOH
75
4
HOH
HOH
317
A
HOH
76
4
HOH
HOH
318
A
HOH
77
4
HOH
HOH
319
A
HOH
78
4
HOH
HOH
320
A
HOH
79
4
HOH
HOH
321
A
HOH
80
4
HOH
HOH
322
A
HOH
81
4
HOH
HOH
323
A
HOH
82
4
HOH
HOH
324
A
HOH
83
4
HOH
HOH
325
A
HOH
84
4
HOH
HOH
326
A
HOH
85
4
HOH
HOH
327
A
HOH
86
4
HOH
HOH
328
A
HOH
87
4
HOH
HOH
329
A
HOH
88
4
HOH
HOH
330
A
HOH
89
4
HOH
HOH
331
A
HOH
90
4
HOH
HOH
332
A
HOH
91
4
HOH
HOH
333
A
HOH
92
4
HOH
HOH
334
A
HOH
93
4
HOH
HOH
335
A
HOH
94
4
HOH
HOH
336
A
HOH
95
4
HOH
HOH
337
A
HOH
96
4
HOH
HOH
338
A
HOH
97
4
HOH
HOH
339
A
HOH
98
4
HOH
HOH
340
A
HOH
99
4
HOH
HOH
341
A
HOH
100
4
HOH
HOH
342
A
HOH
101
4
HOH
HOH
343
A
HOH
102
4
HOH
HOH
344
A
HOH
103
4
HOH
HOH
345
A
HOH
104
4
HOH
HOH
346
A
HOH
105
4
HOH
HOH
347
A
HOH
106
4
HOH
HOH
348
A
HOH
107
4
HOH
HOH
349
A
HOH
108
4
HOH
HOH
350
A
HOH
109
4
HOH
HOH
351
A
HOH
110
4
HOH
HOH
352
A
HOH
111
4
HOH
HOH
353
A
HOH
112
4
HOH
HOH
354
A
HOH
113
4
HOH
HOH
355
A
HOH
114
4
HOH
HOH
356
A
HOH
115
4
HOH
HOH
357
A
HOH
116
4
HOH
HOH
358
A
HOH
117
4
HOH
HOH
359
A
HOH
118
4
HOH
HOH
360
A
HOH
119
4
HOH
HOH
361
A
HOH
120
4
HOH
HOH
362
A
HOH
121
4
HOH
HOH
363
A
HOH
122
4
HOH
HOH
364
A
HOH
124
4
HOH
HOH
365
A
HOH
125
4
HOH
HOH
366
A
HOH
126
4
HOH
HOH
367
A
HOH
127
4
HOH
HOH
368
A
HOH
128
4
HOH
HOH
369
A
HOH
129
4
HOH
HOH
370
A
HOH
2
4
HOH
HOH
371
A
HOH
24
4
HOH
HOH
372
A
HOH
53
4
HOH
HOH
373
A
HOH
63
4
HOH
HOH
374
A
HOH
123
4
HOH
HOH
375
A
ILE
16
n
1
ILE
16
A
ILE
17
n
2
ILE
17
A
GLY
18
n
3
GLY
18
A
GLY
19
n
4
GLY
19
A
ASN
20
n
5
ASN
20
A
GLU
21
n
6
GLU
21
A
VAL
22
n
7
VAL
22
A
THR
23
n
8
THR
23
A
PRO
24
n
9
PRO
24
A
HIS
25
n
10
HIS
25
A
SER
26
n
11
SER
26
A
ARG
27
n
12
ARG
27
A
PRO
28
n
13
PRO
28
A
TYR
29
n
14
TYR
29
A
MET
30
n
15
MET
30
A
VAL
31
n
16
VAL
31
A
LEU
32
n
17
LEU
32
A
LEU
33
n
18
LEU
33
A
SER
34
n
19
SER
34
A
LEU
35
n
20
LEU
35
A
ASP
36
n
21
ASP
36
A
ARG
37
n
22
ARG
37
A
LYS
38
n
23
LYS
38
A
THR
39
n
24
THR
39
A
ILE
40
n
25
ILE
40
A
CYS
42
n
26
CYS
42
A
ALA
43
n
27
ALA
43
A
GLY
44
n
28
GLY
44
A
ALA
45
n
29
ALA
45
A
LEU
46
n
30
LEU
46
A
ILE
47
n
31
ILE
47
A
ALA
48
n
32
ALA
48
A
LYS
49
n
33
LYS
49
A
ASP
50
n
34
ASP
50
A
TRP
51
n
35
TRP
51
A
VAL
52
n
36
VAL
52
A
LEU
53
n
37
LEU
53
A
THR
54
n
38
THR
54
A
ALA
55
n
39
ALA
55
A
ALA
56
n
40
ALA
56
A
HIS
57
n
41
HIS
57
A
CYS
58
n
42
CYS
58
A
ASN
59
n
43
ASN
59
A
LEU
60
n
44
LEU
60
A
ASN
61
n
45
ASN
61
A
LYS
62
n
46
A
LYS
62
A
ARG
62
n
47
B
ARG
62
A
SER
63
n
48
SER
63
A
GLN
64
n
49
GLN
64
A
VAL
66
n
50
VAL
66
A
ILE
67
n
51
ILE
67
A
LEU
68
n
52
LEU
68
A
GLY
69
n
53
GLY
69
A
ALA
70
n
54
ALA
70
A
HIS
71
n
55
HIS
71
A
SER
72
n
56
SER
72
A
ILE
73
n
57
ILE
73
A
THR
74
n
58
THR
74
A
ARG
75
n
59
ARG
75
A
GLU
76
n
60
GLU
76
A
GLU
77
n
61
GLU
77
A
PRO
78
n
62
PRO
78
A
THR
79
n
63
THR
79
A
LYS
80
n
64
LYS
80
A
GLN
81
n
65
GLN
81
A
ILE
82
n
66
ILE
82
A
MET
83
n
67
MET
83
A
LEU
84
n
68
LEU
84
A
VAL
85
n
69
VAL
85
A
LYS
86
n
70
LYS
86
A
LYS
87
n
71
LYS
87
A
GLU
88
n
72
GLU
88
A
PHE
89
n
73
PHE
89
A
PRO
90
n
74
PRO
90
A
TYR
91
n
75
TYR
91
A
PRO
92
n
76
PRO
92
A
CYS
93
n
77
CYS
93
A
TYR
94
n
78
TYR
94
A
ASP
95
n
79
ASP
95
A
PRO
96
n
80
PRO
96
A
ALA
97
n
81
ALA
97
A
THR
98
n
82
THR
98
A
ARG
99
n
83
ARG
99
A
GLU
100
n
84
GLU
100
A
GLY
101
n
85
GLY
101
A
ASP
102
n
86
ASP
102
A
LEU
103
n
87
LEU
103
A
LYS
104
n
88
LYS
104
A
LEU
105
n
89
LEU
105
A
LEU
106
n
90
LEU
106
A
GLN
107
n
91
GLN
107
A
LEU
108
n
92
LEU
108
A
THR
109
n
93
THR
109
A
GLU
110
n
94
GLU
110
A
LYS
111
n
95
LYS
111
A
ALA
112
n
96
ALA
112
A
LYS
113
n
97
LYS
113
A
ILE
114
n
98
ILE
114
A
ASN
115
n
99
ASN
115
A
LYS
116
n
100
LYS
116
A
TYR
117
n
101
TYR
117
A
VAL
118
n
102
VAL
118
A
THR
119
n
103
THR
119
A
ILE
120
n
104
ILE
120
A
LEU
121
n
105
LEU
121
A
HIS
122
n
106
HIS
122
A
LEU
123
n
107
LEU
123
A
PRO
124
n
108
PRO
124
A
LYS
125
n
109
LYS
125
A
LYS
126
n
110
LYS
126
A
GLY
127
n
111
GLY
127
A
ASP
128
n
112
ASP
128
A
ASP
129
n
113
ASP
129
A
VAL
130
n
114
VAL
130
A
LYS
131
n
115
LYS
131
A
PRO
132
n
116
PRO
132
A
GLY
133
n
117
GLY
133
A
THR
134
n
118
THR
134
A
MET
135
n
119
MET
135
A
CYS
136
n
120
CYS
136
A
GLN
137
n
121
GLN
137
A
VAL
138
n
122
VAL
138
A
ALA
139
n
123
ALA
139
A
GLY
140
n
124
GLY
140
A
TRP
141
n
125
TRP
141
A
GLY
142
n
126
GLY
142
A
ARG
143
n
127
ARG
143
A
THR
144
n
128
THR
144
A
HIS
145
n
129
HIS
145
A
ASN
146
n
130
ASN
146
A
SER
148
n
131
SER
148
A
ALA
149
n
132
ALA
149
A
SER
150
n
133
SER
150
A
TRP
151
n
134
TRP
151
A
SER
152
n
135
SER
152
A
ASP
153
n
136
ASP
153
A
THR
154
n
137
THR
154
A
LEU
155
n
138
LEU
155
A
ARG
156
n
139
ARG
156
A
GLU
157
n
140
GLU
157
A
VAL
158
n
141
VAL
158
A
GLU
159
n
142
GLU
159
A
ILE
160
n
143
ILE
160
A
THR
161
n
144
THR
161
A
ILE
162
n
145
ILE
162
A
ILE
163
n
146
ILE
163
A
ASP
164
n
147
ASP
164
A
ARG
165
n
148
ARG
165
A
LYS
166
n
149
LYS
166
A
VAL
167
n
150
VAL
167
A
CYS
168
n
151
CYS
168
A
ASN
169
n
152
ASN
169
A
ASP
170
n
153
A
ASP
170
A
ARG
170
n
154
B
ARG
170
A
ASN
170
n
155
C
ASN
170
A
HIS
171
n
156
HIS
171
A
TYR
172
n
157
TYR
172
A
ASN
173
n
158
ASN
173
A
PHE
174
n
159
PHE
174
A
ASN
175
n
160
A
ASN
175
A
PRO
175
n
161
B
PRO
175
A
VAL
175
n
162
C
VAL
175
A
ILE
176
n
163
ILE
176
A
GLY
177
n
164
GLY
177
A
MET
178
n
165
MET
178
A
ASN
179
n
166
ASN
179
A
MET
180
n
167
MET
180
A
VAL
181
n
168
VAL
181
A
CYS
182
n
169
CYS
182
A
ALA
183
n
170
ALA
183
A
GLY
184
n
171
A
GLY
184
A
SER
184
n
172
B
SER
184
A
LEU
185
n
173
LEU
185
A
ARG
186
n
174
ARG
186
A
GLY
187
n
175
GLY
187
A
GLY
188
n
176
A
GLY
188
A
ARG
188
n
177
B
ARG
188
A
ASP
189
n
178
ASP
189
A
SER
190
n
179
SER
190
A
CYS
191
n
180
CYS
191
A
ASN
192
n
181
ASN
192
A
GLY
193
n
182
GLY
193
A
ASP
194
n
183
ASP
194
A
SER
195
n
184
SER
195
A
GLY
196
n
185
GLY
196
A
SER
197
n
186
SER
197
A
PRO
198
n
187
PRO
198
A
LEU
199
n
188
LEU
199
A
LEU
200
n
189
LEU
200
A
CYS
201
n
190
CYS
201
A
GLU
202
n
191
GLU
202
A
GLY
207
n
192
GLY
207
A
VAL
208
n
193
VAL
208
A
PHE
209
n
194
PHE
209
A
ARG
210
n
195
ARG
210
A
GLY
211
n
196
GLY
211
A
VAL
212
n
197
VAL
212
A
THR
213
n
198
THR
213
A
SER
214
n
199
SER
214
A
PHE
215
n
200
PHE
215
A
GLY
216
n
201
GLY
216
A
LEU
217
n
202
LEU
217
A
GLU
218
n
203
GLU
218
A
ASN
219
n
204
A
ASN
219
A
LYS
219
n
205
B
LYS
219
A
CYS
220
n
206
CYS
220
A
GLY
221
n
207
A
GLY
221
A
ASP
221
n
208
B
ASP
221
A
PRO
222
n
209
PRO
222
A
ARG
223
n
210
ARG
223
A
GLY
224
n
211
GLY
224
A
PRO
225
n
212
PRO
225
A
GLY
226
n
213
GLY
226
A
VAL
227
n
214
VAL
227
A
TYR
228
n
215
TYR
228
A
ILE
229
n
216
ILE
229
A
LEU
230
n
217
LEU
230
A
LEU
231
n
218
LEU
231
A
SER
232
n
219
SER
232
A
LYS
233
n
220
A
LYS
233
A
LYS
233
n
221
B
LYS
233
A
HIS
234
n
222
HIS
234
A
LEU
235
n
223
LEU
235
A
ASN
236
n
224
ASN
236
A
TRP
237
n
225
TRP
237
A
ILE
238
n
226
ILE
238
A
ILE
239
n
227
ILE
239
A
MET
240
n
228
MET
240
A
THR
241
n
229
THR
241
A
ILE
242
n
230
ILE
242
A
LYS
243
n
231
LYS
243
A
GLY
244
n
232
GLY
244
A
n
233
245
A
n
234
246
A
author_and_software_defined_assembly
PISA
2
dimeric
1600
-40
20550
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
3_555
-x,y,-z+1/2
crystal symmetry operation
0.0000000000
0.0000000000
19.7775000000
A
N
ASN
20
A
N
ASN
5
A
O
GLU
157
A
O
GLU
140
A
N
THR
161
A
N
THR
144
A
A
O
GLY
184
A
O
GLY
171
A
N
VAL
181
A
N
VAL
168
A
O
TYR
228
A
O
TYR
215
A
O
VAL
227
A
O
VAL
214
A
N
PHE
215
A
N
PHE
200
A
O
ARG
210
A
O
ARG
195
A
N
LEU
199
A
N
LEU
188
A
O
LEU
200
A
O
LEU
189
A
N
GLN
137
A
N
GLN
121
A
N
CYS
136
A
N
CYS
120
A
O
ILE
160
A
O
ILE
143
A
O
MET
83
A
O
MET
67
A
N
VAL
66
A
N
VAL
50
A
O
ILE
67
A
O
ILE
51
A
N
LEU
32
A
N
LEU
17
A
N
LEU
33
A
N
LEU
18
A
O
CYS
42
A
O
CYS
26
A
N
ALA
45
A
N
ALA
29
A
O
LEU
53
A
O
LEU
37
A
N
VAL
52
A
N
VAL
36
A
O
LEU
106
A
O
LEU
90
A
O
GLN
107
A
O
GLN
91
A
N
LYS
87
A
N
LYS
71
1
A
CD
ARG
37
A
CD
ARG
22
1
Y
1
A
NE
ARG
37
A
NE
ARG
22
1
Y
1
A
CZ
ARG
37
A
CZ
ARG
22
1
Y
1
A
NH1
ARG
37
A
NH1
ARG
22
1
Y
1
A
NH2
ARG
37
A
NH2
ARG
22
1
Y
1
A
CD
LYS
38
A
CD
LYS
23
1
Y
1
A
CE
LYS
38
A
CE
LYS
23
1
Y
1
A
NZ
LYS
38
A
NZ
LYS
23
1
Y
B
1
A
CG
ARG
170
A
CG
ARG
154
1
Y
B
1
A
CD
ARG
170
A
CD
ARG
154
1
Y
B
1
A
NE
ARG
170
A
NE
ARG
154
1
Y
B
1
A
CZ
ARG
170
A
CZ
ARG
154
1
Y
B
1
A
NH1
ARG
170
A
NH1
ARG
154
1
Y
B
1
A
NH2
ARG
170
A
NH2
ARG
154
1
Y
A
1
A
CD
LYS
233
A
CD
LYS
220
1
Y
A
1
A
CE
LYS
233
A
CE
LYS
220
1
Y
A
1
A
NZ
LYS
233
A
NZ
LYS
220
1
Y
1
A
CG
LYS
243
A
CG
LYS
231
1
Y
1
A
CD
LYS
243
A
CD
LYS
231
1
Y
1
A
CE
LYS
243
A
CE
LYS
231
1
Y
1
A
NZ
LYS
243
A
NZ
LYS
231
1
Y
1
A
ALA
245
A
ALA
233
1
Y
1
A
VAL
246
A
VAL
234
1
Y
1
A
A
OG
O2
SER
0G6
195
1
2.19
1
A
HIS
171
10.03
1
5.70
0.90
118.30
124.00
A
A
A
CB
CG
OD2
ASP
ASP
ASP
50
50
50
N
1
16.15
2.30
115.30
131.45
A
A
A
CA
CB
CG
LEU
LEU
LEU
60
60
60
N
1
5.62
0.90
118.30
123.92
A
A
A
CB
CG
OD2
ASP
ASP
ASP
129
129
129
N
A
A
A
1
5.65
0.90
118.30
123.95
A
A
A
CB
CG
OD2
ASP
ASP
ASP
170
170
170
N
1
21.16
2.30
115.30
136.46
A
A
A
CA
CB
CG
LEU
LEU
LEU
185
185
185
N
B
B
B
1
6.32
0.90
118.30
124.62
A
A
A
CB
CG
OD2
ASP
ASP
ASP
221
221
221
N
1
A
ASP
36
-153.83
-151.48
1
A
ASN
61
-114.82
-168.77
1
A
HIS
71
-120.11
-59.57
1
A
ASN
115
-156.37
-151.23
1
A
ARG
143
-39.93
133.75
1
A
SER
148
-173.53
-172.39
1
A
ALA
149
53.83
-158.38
1
A
SER
150
-128.40
-159.94
A
1
A
ASP
170
-37.19
159.37
1
A
HIS
171
-127.58
-120.90
1
A
ILE
242
-64.78
-77.11
35.985
-1.98
0.00
0.00
2.91
0.00
-0.93
0.943
0.922
0.23245
0.19137
0.19339
0.19137
2.40
20.00
660
13319
12664
5.0
99.46
6.903
0.158
RANDOM
1
THROUGHOUT
0
MOLECULAR REPLACEMENT
0.295
0.223
0.80
0.80
1.40
1DST
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
0.223
0.295
2.40
20.00
128
1937
35
0
1774
0.013
0.021
1856
1.543
1.971
2514
6.345
5.000
234
0.105
0.200
282
0.006
0.020
1372
0.207
0.200
832
0.137
0.200
142
0.400
0.200
21
0.141
0.200
7
0.713
1.500
1164
1.390
2.000
1882
2.039
3.000
691
3.433
4.500
629
0.331
0.242
2.461
46
873
20
2.4
20
1ORF
13319
12664
0
0
1
99.5
2.4
2.49
1
94.3
refinement
REFMAC
5.1.24
data reduction
DENZO
data scaling
SCALEPACK
phasing
EPMR
The Oligomeric Structure of Human Granzyme A Reveals the Molecular Determinants of Substrate Specificity
1
N
N
2
N
N
3
N
N
4
N
N
The biological assembly is a dimer generated by the two fold axis: -x, y, 1/2-z
A
ASP
164
A
ASP
147
HELX_P
A
ASN
169
A
ASN
152
1
1
6
A
SER
232
A
SER
219
HELX_P
A
LYS
243
A
LYS
231
1
2
13
disulf
2.053
A
CYS
42
A
SG
CYS
26
1_555
A
CYS
58
A
SG
CYS
42
1_555
disulf
2.209
A
CYS
93
A
SG
CYS
77
1_555
A
CYS
93
A
SG
CYS
77
3_555
disulf
2.054
A
CYS
136
A
SG
CYS
120
1_555
A
CYS
201
A
SG
CYS
190
1_555
disulf
2.019
A
CYS
168
A
SG
CYS
151
1_555
A
CYS
182
A
SG
CYS
169
1_555
disulf
2.042
A
CYS
191
A
SG
CYS
180
1_555
A
CYS
220
A
SG
CYS
206
1_555
covale
1.539
one
A
0G6
1
B
C3
0G6
1_555
A
HIS
57
A
NE2
HIS
41
1_555
covale
1.381
none
A
0G6
1
B
C2
0G6
1_555
A
SER
195
A
OG
SER
184
1_555
HYDROLASE/HYDROLASE INHIBITOR
HYDROLASE-HYDROLASE INHIBITOR complex
A
ASN
175
A
ASN
160
A
B
1
A
PRO
175
A
PRO
161
-10.40
GRAA_HUMAN
UNP
1
29
P12544
IIGGNEVTPHSRPYMVLLSLDRKTICAGALIAKDWVLTAAHCNLNKRSQVILGAHSITREEPTKQIMLVKKEFPYPCYDP
ATREGDLKLLQLTEKAKINKYVTILHLPKKGDDVKPGTMCQVAGWGRTHNSASWSDTLREVNITIIDRKVCNDRNHYNFN
PVIGMNMVCAGSLRGGRDSCNGDSGSPLLCEGVFRGVTSFGLENKCGDPRGPGVYILLSKKHLNWIIMTIKGAV
29
262
1ORF
16
246
P12544
A
1
1
234
1
ASN
engineered mutation
GLU
157
1ORF
A
P12544
UNP
170
140
8
7
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ASN
20
A
ASN
5
A
GLU
21
A
GLU
6
A
ARG
156
A
ARG
139
A
ILE
163
A
ILE
146
A
MET
180
A
MET
167
A
GLY
184
A
GLY
171
A
A
GLY
226
A
GLY
213
A
LEU
230
A
LEU
217
A
VAL
208
A
VAL
193
A
PHE
215
A
PHE
200
A
PRO
198
A
PRO
187
A
CYS
201
A
CYS
190
A
MET
135
A
MET
119
A
GLY
140
A
GLY
124
A
ARG
156
A
ARG
139
A
ILE
163
A
ILE
146
A
GLN
81
A
GLN
65
A
MET
83
A
MET
67
A
GLN
64
A
GLN
49
A
LEU
68
A
LEU
52
A
MET
30
A
MET
15
A
SER
34
A
SER
19
A
ILE
40
A
ILE
25
A
ALA
48
A
ALA
32
A
TRP
51
A
TRP
35
A
THR
54
A
THR
38
A
LYS
104
A
LYS
88
A
LEU
108
A
LEU
92
A
VAL
85
A
VAL
69
A
PRO
90
A
PRO
74
BINDING SITE FOR RESIDUE 0G6 A 1
A
0G6
1
Software
16
BINDING SITE FOR RESIDUE SO4 A 247
A
SO4
247
Software
5
A
HIS
57
A
HIS
41
16
1_555
A
ASP
189
A
ASP
178
16
1_555
A
SER
190
A
SER
179
16
1_555
A
CYS
191
A
CYS
180
16
1_555
A
GLY
193
A
GLY
182
16
1_555
A
SER
195
A
SER
184
16
1_555
A
SER
214
A
SER
199
16
1_555
A
PHE
215
A
PHE
200
16
1_555
A
GLY
216
A
GLY
201
16
1_555
A
GLU
218
A
GLU
203
16
1_555
A
GLY
226
A
GLY
213
16
1_555
A
HOH
272
D
HOH
16
1_555
A
HOH
372
D
HOH
16
1_555
A
HOH
373
D
HOH
16
1_555
A
HOH
374
D
HOH
16
1_555
A
HOH
375
D
HOH
16
1_555
A
SER
184
A
SER
172
B
5
1_555
A
LEU
185
A
LEU
173
5
1_555
A
ARG
186
A
ARG
174
5
1_555
A
ARG
188
A
ARG
177
B
5
1_555
A
HOH
306
D
HOH
5
1_555
20
C 2 2 21