0.022826
0.000000
0.000000
0.000000
0.019007
0.000000
0.000000
0.000000
0.016665
0.00000
0.00000
0.00000
Serre, L.
Rossy, E.
Pebay-Peyroula, E.
Cohen-Addad, C.
Coves, J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
43.810
52.612
60.006
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
O
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
N
N
58
R
C
N
59
N
C
N
60
N
O
N
61
N
C
N
62
N
S
N
63
N
O
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
N
N
72
S
C
N
73
N
C
N
74
N
O
N
75
N
C
N
76
N
C
N
77
N
C
N
78
N
O
N
79
N
N
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
N
N
92
S
C
N
93
N
C
N
94
N
O
N
95
N
C
N
96
N
C
N
97
N
C
N
98
N
O
N
99
N
O
N
100
N
O
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
N
N
111
N
C
N
112
N
C
N
113
N
O
N
114
N
O
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
O
N
121
N
H
N
122
N
H
N
123
N
N
N
124
S
C
N
125
N
C
N
126
N
O
N
127
S
C
N
128
N
C
N
129
N
C
N
130
N
C
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
N
N
146
S
C
N
147
N
C
N
148
N
O
N
149
N
C
N
150
N
C
N
151
N
C
N
152
N
C
N
153
N
O
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
N
N
168
S
C
N
169
N
C
N
170
N
O
N
171
N
C
N
172
N
C
N
173
N
C
N
174
N
C
N
175
N
N
N
176
N
O
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
N
N
193
S
C
N
194
N
C
N
195
N
O
N
196
N
C
N
197
N
C
N
198
N
S
N
199
N
C
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
N
N
213
S
C
N
214
N
C
N
215
N
O
N
216
N
C
Y
217
N
C
Y
218
N
C
Y
219
N
C
Y
220
N
C
Y
221
N
C
Y
222
N
C
N
223
N
O
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
N
N
236
S
C
N
237
N
C
N
238
N
O
N
239
N
C
N
240
N
C
N
241
N
C
N
242
N
O
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
N
N
253
S
C
N
254
N
C
N
255
N
O
N
256
N
C
N
257
N
O
N
258
N
O
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
N
N
267
S
C
N
268
N
C
N
269
N
O
N
270
R
C
N
271
N
O
N
272
N
C
N
273
N
O
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
N
N
284
S
C
N
285
N
C
N
286
N
O
N
287
N
C
Y
288
N
C
Y
289
N
C
Y
290
N
C
Y
291
N
C
Y
292
N
C
Y
293
N
C
N
294
N
O
N
295
N
O
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
N
N
308
S
C
N
309
N
C
N
310
N
O
N
311
N
C
N
312
N
C
N
313
N
C
N
314
N
O
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
doub
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
doub
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
doub
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
doub
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
doub
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
doub
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
doub
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
doub
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
doub
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
Y
211
N
doub
Y
212
N
sing
Y
213
N
sing
N
214
N
sing
Y
215
N
doub
N
216
N
sing
Y
217
N
doub
N
218
N
sing
Y
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
doub
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
doub
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
doub
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
Y
280
N
doub
Y
281
N
sing
Y
282
N
sing
N
283
N
sing
Y
284
N
doub
N
285
N
sing
Y
286
N
doub
N
287
N
sing
Y
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
doub
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
UK
J.MOL.BIOL.
JMOBAK
0070
0022-2836
339
161
171
10.1016/j.jmb.2004.03.022
15123428
Crystal Structure of the Oxidized Form of the Periplasmic Mercury-binding Protein MerP from Ralstonia metallidurans CH34
2004
10.2210/pdb1osd/pdb
pdb_00001osd
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
osmic multi-layer mirror
IMAGE PLATE
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
ENRAF-NONIUS FR591
7530.622
hypothetical protein MerP
residues 1-72
2
man
polymer
18.015
water
125
nat
water
MerP
no
no
ATQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVKQ
ATQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVKQ
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Cupriavidus
Escherichia
Escherichia coli
sample
MerP
119219
Cupriavidus metallidurans
469008
Escherichia coli BL21(DE3)
BL21 (DE3)
PLASMID
pET-3a
1
2.03
39.02
VAPOR DIFFUSION, HANGING DROP
8.5
PEGMME5000, Sodium acetate, Tris-HCl, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
diffrn_source
struct_biol
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_ncs_dom_lim
repository
Initial release
Version format compliance
Version format compliance
Data collection
Data collection
Database references
Refinement description
1
0
2004-05-18
1
1
2008-04-29
1
2
2011-07-13
1
3
2018-07-04
1
4
2023-10-25
_diffrn_source.type
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ncs_dom_lim.beg_auth_comp_id
_struct_ncs_dom_lim.end_auth_comp_id
Shigella flexneri oxidized MerP
Shigella flexneri reduced MerP
Shigella flexneri Mercury bound MerP
RCSB
Y
PDBJ
2003-03-19
REL
REL
HOH
water
1AFI
PDB entry 1AFI
PDB
experimental model
HOH
3
2
HOH
HOH
73
A
HOH
5
2
HOH
HOH
74
A
HOH
8
2
HOH
HOH
75
A
HOH
16
2
HOH
HOH
76
A
HOH
19
2
HOH
HOH
77
A
HOH
21
2
HOH
HOH
78
A
HOH
22
2
HOH
HOH
79
A
HOH
24
2
HOH
HOH
80
A
HOH
27
2
HOH
HOH
81
A
HOH
28
2
HOH
HOH
82
A
HOH
29
2
HOH
HOH
83
A
HOH
30
2
HOH
HOH
84
A
HOH
31
2
HOH
HOH
85
A
HOH
32
2
HOH
HOH
86
A
HOH
33
2
HOH
HOH
87
A
HOH
34
2
HOH
HOH
88
A
HOH
35
2
HOH
HOH
89
A
HOH
36
2
HOH
HOH
90
A
HOH
48
2
HOH
HOH
91
A
HOH
51
2
HOH
HOH
92
A
HOH
52
2
HOH
HOH
93
A
HOH
53
2
HOH
HOH
94
A
HOH
55
2
HOH
HOH
95
A
HOH
58
2
HOH
HOH
96
A
HOH
60
2
HOH
HOH
97
A
HOH
61
2
HOH
HOH
98
A
HOH
62
2
HOH
HOH
99
A
HOH
67
2
HOH
HOH
100
A
HOH
68
2
HOH
HOH
101
A
HOH
71
2
HOH
HOH
102
A
HOH
73
2
HOH
HOH
103
A
HOH
75
2
HOH
HOH
104
A
HOH
84
2
HOH
HOH
105
A
HOH
87
2
HOH
HOH
106
A
HOH
88
2
HOH
HOH
107
A
HOH
89
2
HOH
HOH
108
A
HOH
91
2
HOH
HOH
109
A
HOH
93
2
HOH
HOH
110
A
HOH
101
2
HOH
HOH
111
A
HOH
104
2
HOH
HOH
112
A
HOH
105
2
HOH
HOH
113
A
HOH
106
2
HOH
HOH
114
A
HOH
107
2
HOH
HOH
115
A
HOH
110
2
HOH
HOH
116
A
HOH
113
2
HOH
HOH
117
A
HOH
115
2
HOH
HOH
118
A
HOH
116
2
HOH
HOH
119
A
HOH
124
2
HOH
HOH
120
A
HOH
128
2
HOH
HOH
121
A
HOH
129
2
HOH
HOH
122
A
HOH
130
2
HOH
HOH
123
A
HOH
134
2
HOH
HOH
124
A
HOH
135
2
HOH
HOH
125
A
HOH
136
2
HOH
HOH
126
A
HOH
137
2
HOH
HOH
127
A
HOH
138
2
HOH
HOH
128
A
HOH
141
2
HOH
HOH
129
A
HOH
1
2
HOH
HOH
73
B
HOH
2
2
HOH
HOH
74
B
HOH
4
2
HOH
HOH
75
B
HOH
6
2
HOH
HOH
76
B
HOH
7
2
HOH
HOH
77
B
HOH
9
2
HOH
HOH
78
B
HOH
10
2
HOH
HOH
79
B
HOH
11
2
HOH
HOH
80
B
HOH
12
2
HOH
HOH
81
B
HOH
13
2
HOH
HOH
82
B
HOH
14
2
HOH
HOH
83
B
HOH
15
2
HOH
HOH
84
B
HOH
17
2
HOH
HOH
85
B
HOH
18
2
HOH
HOH
86
B
HOH
20
2
HOH
HOH
87
B
HOH
23
2
HOH
HOH
88
B
HOH
25
2
HOH
HOH
89
B
HOH
26
2
HOH
HOH
90
B
HOH
37
2
HOH
HOH
91
B
HOH
38
2
HOH
HOH
92
B
HOH
39
2
HOH
HOH
93
B
HOH
40
2
HOH
HOH
94
B
HOH
41
2
HOH
HOH
95
B
HOH
42
2
HOH
HOH
96
B
HOH
43
2
HOH
HOH
97
B
HOH
44
2
HOH
HOH
98
B
HOH
45
2
HOH
HOH
99
B
HOH
46
2
HOH
HOH
100
B
HOH
47
2
HOH
HOH
101
B
HOH
49
2
HOH
HOH
102
B
HOH
50
2
HOH
HOH
103
B
HOH
54
2
HOH
HOH
104
B
HOH
57
2
HOH
HOH
105
B
HOH
59
2
HOH
HOH
106
B
HOH
64
2
HOH
HOH
107
B
HOH
65
2
HOH
HOH
108
B
HOH
66
2
HOH
HOH
109
B
HOH
69
2
HOH
HOH
110
B
HOH
70
2
HOH
HOH
111
B
HOH
74
2
HOH
HOH
112
B
HOH
77
2
HOH
HOH
113
B
HOH
78
2
HOH
HOH
114
B
HOH
79
2
HOH
HOH
115
B
HOH
80
2
HOH
HOH
116
B
HOH
82
2
HOH
HOH
117
B
HOH
83
2
HOH
HOH
118
B
HOH
85
2
HOH
HOH
119
B
HOH
90
2
HOH
HOH
120
B
HOH
92
2
HOH
HOH
121
B
HOH
94
2
HOH
HOH
122
B
HOH
96
2
HOH
HOH
123
B
HOH
99
2
HOH
HOH
124
B
HOH
100
2
HOH
HOH
125
B
HOH
102
2
HOH
HOH
126
B
HOH
103
2
HOH
HOH
127
B
HOH
112
2
HOH
HOH
128
B
HOH
118
2
HOH
HOH
129
B
HOH
119
2
HOH
HOH
130
B
HOH
121
2
HOH
HOH
131
B
HOH
122
2
HOH
HOH
132
B
HOH
125
2
HOH
HOH
133
B
HOH
126
2
HOH
HOH
134
B
HOH
127
2
HOH
HOH
135
B
HOH
131
2
HOH
HOH
136
B
HOH
132
2
HOH
HOH
137
B
HOH
139
2
HOH
HOH
138
B
HOH
140
2
HOH
HOH
139
B
HOH
142
2
HOH
HOH
140
B
ALA
1
n
1
ALA
1
A
THR
2
n
2
THR
2
A
GLN
3
n
3
GLN
3
A
THR
4
n
4
THR
4
A
VAL
5
n
5
VAL
5
A
THR
6
n
6
THR
6
A
LEU
7
n
7
LEU
7
A
SER
8
n
8
SER
8
A
VAL
9
n
9
VAL
9
A
PRO
10
n
10
PRO
10
A
GLY
11
n
11
GLY
11
A
MET
12
n
12
MET
12
A
THR
13
n
13
THR
13
A
CYS
14
n
14
CYS
14
A
SER
15
n
15
SER
15
A
ALA
16
n
16
ALA
16
A
CYS
17
n
17
CYS
17
A
PRO
18
n
18
PRO
18
A
ILE
19
n
19
ILE
19
A
THR
20
n
20
THR
20
A
VAL
21
n
21
VAL
21
A
LYS
22
n
22
LYS
22
A
LYS
23
n
23
LYS
23
A
ALA
24
n
24
ALA
24
A
ILE
25
n
25
ILE
25
A
SER
26
n
26
SER
26
A
LYS
27
n
27
LYS
27
A
VAL
28
n
28
VAL
28
A
GLU
29
n
29
GLU
29
A
GLY
30
n
30
GLY
30
A
VAL
31
n
31
VAL
31
A
SER
32
n
32
SER
32
A
LYS
33
n
33
LYS
33
A
VAL
34
n
34
VAL
34
A
ASP
35
n
35
ASP
35
A
VAL
36
n
36
VAL
36
A
THR
37
n
37
THR
37
A
PHE
38
n
38
PHE
38
A
GLU
39
n
39
GLU
39
A
THR
40
n
40
THR
40
A
ARG
41
n
41
ARG
41
A
GLU
42
n
42
GLN
42
A
ALA
43
n
43
ALA
43
A
VAL
44
n
44
VAL
44
A
VAL
45
n
45
VAL
45
A
THR
46
n
46
THR
46
A
PHE
47
n
47
PHE
47
A
ASP
48
n
48
ASP
48
A
ASP
49
n
49
ASP
49
A
ALA
50
n
50
ALA
50
A
LYS
51
n
51
LYS
51
A
THR
52
n
52
THR
52
A
SER
53
n
53
SER
53
A
VAL
54
n
54
VAL
54
A
GLN
55
n
55
GLN
55
A
LYS
56
n
56
LYS
56
A
LEU
57
n
57
LEU
57
A
THR
58
n
58
THR
58
A
LYS
59
n
59
LYS
59
A
ALA
60
n
60
ALA
60
A
THR
61
n
61
THR
61
A
ALA
62
n
62
ALA
62
A
ASP
63
n
63
ASP
63
A
ALA
64
n
64
ALA
64
A
GLY
65
n
65
GLY
65
A
TYR
66
n
66
TYR
66
A
PRO
67
n
67
PRO
67
A
SER
68
n
68
SER
68
A
SER
69
n
69
SER
69
A
VAL
70
n
70
VAL
70
A
LYS
71
n
71
LYS
71
A
GLN
72
n
72
GLN
72
A
ALA
1
n
1
ALA
1
B
THR
2
n
2
THR
2
B
GLN
3
n
3
GLN
3
B
THR
4
n
4
THR
4
B
VAL
5
n
5
VAL
5
B
THR
6
n
6
THR
6
B
LEU
7
n
7
LEU
7
B
SER
8
n
8
SER
8
B
VAL
9
n
9
VAL
9
B
PRO
10
n
10
PRO
10
B
GLY
11
n
11
GLY
11
B
MET
12
n
12
MET
12
B
THR
13
n
13
THR
13
B
CYS
14
n
14
CYS
14
B
SER
15
n
15
SER
15
B
ALA
16
n
16
ALA
16
B
CYS
17
n
17
CYS
17
B
PRO
18
n
18
PRO
18
B
ILE
19
n
19
ILE
19
B
THR
20
n
20
THR
20
B
VAL
21
n
21
VAL
21
B
LYS
22
n
22
LYS
22
B
LYS
23
n
23
LYS
23
B
ALA
24
n
24
ALA
24
B
ILE
25
n
25
ILE
25
B
SER
26
n
26
SER
26
B
LYS
27
n
27
LYS
27
B
VAL
28
n
28
VAL
28
B
GLU
29
n
29
GLU
29
B
GLY
30
n
30
GLY
30
B
VAL
31
n
31
VAL
31
B
SER
32
n
32
SER
32
B
LYS
33
n
33
LYS
33
B
VAL
34
n
34
VAL
34
B
ASP
35
n
35
ASP
35
B
VAL
36
n
36
VAL
36
B
THR
37
n
37
THR
37
B
PHE
38
n
38
PHE
38
B
GLU
39
n
39
GLU
39
B
THR
40
n
40
THR
40
B
ARG
41
n
41
ARG
41
B
GLU
42
n
42
GLN
42
B
ALA
43
n
43
ALA
43
B
VAL
44
n
44
VAL
44
B
VAL
45
n
45
VAL
45
B
THR
46
n
46
THR
46
B
PHE
47
n
47
PHE
47
B
ASP
48
n
48
ASP
48
B
ASP
49
n
49
ASP
49
B
ALA
50
n
50
ALA
50
B
LYS
51
n
51
LYS
51
B
THR
52
n
52
THR
52
B
SER
53
n
53
SER
53
B
VAL
54
n
54
VAL
54
B
GLN
55
n
55
GLN
55
B
LYS
56
n
56
LYS
56
B
LEU
57
n
57
LEU
57
B
THR
58
n
58
THR
58
B
LYS
59
n
59
LYS
59
B
ALA
60
n
60
ALA
60
B
THR
61
n
61
THR
61
B
ALA
62
n
62
ALA
62
B
ASP
63
n
63
ASP
63
B
ALA
64
n
64
ALA
64
B
GLY
65
n
65
GLY
65
B
TYR
66
n
66
TYR
66
B
PRO
67
n
67
PRO
67
B
SER
68
n
68
SER
68
B
SER
69
n
69
SER
69
B
VAL
70
n
70
VAL
70
B
LYS
71
n
71
LYS
71
B
GLN
72
n
72
GLN
72
B
author_defined_assembly
1
monomeric
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
THR
37
A
N
THR
37
A
O
GLN
42
A
O
GLN
42
A
O
ALA
43
A
O
ALA
43
A
N
LEU
7
A
N
LEU
7
A
N
SER
8
A
N
SER
8
A
O
SER
69
A
O
SER
69
B
N
LYS
33
B
N
LYS
33
B
O
THR
46
B
O
THR
46
B
O
ALA
43
B
O
ALA
43
B
N
LEU
7
B
N
LEU
7
B
N
SER
8
B
N
SER
8
B
O
SER
69
B
O
SER
69
1
6.14
0.90
118.30
124.44
A
A
A
CB
CG
OD2
ASP
ASP
ASP
48
48
48
N
1
9.74
0.90
118.30
128.04
A
A
A
CB
CG
OD2
ASP
ASP
ASP
49
49
49
N
1
5.88
0.90
118.30
124.18
A
A
A
CB
CG
OD2
ASP
ASP
ASP
63
63
63
N
1
6.65
1.10
114.20
120.85
B
B
B
CA
CB
SG
CYS
CYS
CYS
17
17
17
N
1
3.83
0.50
120.30
124.13
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
41
41
41
N
1
-3.17
0.50
120.30
117.13
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
41
41
41
N
1
6.21
0.90
118.30
124.51
B
B
B
CB
CG
OD2
ASP
ASP
ASP
48
48
48
N
1
7.89
0.90
118.30
126.19
B
B
B
CB
CG
OD2
ASP
ASP
ASP
49
49
49
N
1
A
A
CB
CG1
VAL
VAL
21
21
0.185
0.021
1.524
1.709
N
1
B
B
CB
CG1
VAL
VAL
44
44
0.149
0.021
1.524
1.673
N
33.569
-0.08
0.00
0.00
0.28
0.00
-0.20
0.954
0.919
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.26754
0.1923
0.19976
0.1997
2.00
39.53
938
8498
9.9
96.10
5.418
0.150
RANDOM
1
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
0.233
0.212
0.80
0.80
1.40
PDB entry 1AFI
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
2.00
39.53
125
1215
0
0
1090
0.034
0.022
1103
0.002
0.020
1043
2.306
1.971
1496
1.213
3.000
2466
6.136
5.000
142
0.148
0.200
199
0.012
0.020
1157
0.002
0.020
177
0.214
0.200
234
0.255
0.200
1198
0.091
0.200
744
0.179
0.200
81
0.215
0.200
6
0.288
0.200
51
0.148
0.200
17
1.484
1.500
728
2.273
2.000
1209
3.593
3.000
375
5.797
4.500
287
1
A
1
412
X-RAY DIFFRACTION
medium positional
0.18
0.50
1
A
1
511
X-RAY DIFFRACTION
loose positional
0.53
5.00
1
A
1
412
X-RAY DIFFRACTION
medium thermal
1.47
2.00
1
A
1
511
X-RAY DIFFRACTION
loose thermal
2.16
10.00
0.44
0.255
2.052
71
599
20
35.0
2.0
40.00
1OSD
9437
1.0
0.0
0.054
0.048
1
10.7
4.2
97.0
0.335
2.00
2.05
2.1
655
0.282
3.7
97.0
refinement
REFMAC
5.1.24
data reduction
DENZO
data scaling
CCP4
(SCALA)
phasing
BEAST
crystal structure of Oxidized MerP from Ralstonia metallidurans CH34
1
N
N
1
N
N
2
N
N
2
N
N
The biological assembly is a monomer
A
ALA
16
A
ALA
16
HELX_P
A
LYS
27
A
LYS
27
1
1
12
A
SER
53
A
SER
53
HELX_P
A
ALA
64
A
ALA
64
1
2
12
B
ALA
16
B
ALA
16
HELX_P
B
LYS
27
B
LYS
27
1
3
12
B
SER
53
B
SER
53
HELX_P
B
ALA
64
B
ALA
64
1
4
12
disulf
2.043
A
CYS
14
A
SG
CYS
14
1_555
A
CYS
17
A
SG
CYS
17
1_555
disulf
2.051
B
CYS
14
B
SG
CYS
14
1_555
B
CYS
17
B
SG
CYS
17
1_555
METAL BINDING PROTEIN
Mercury resistance, Metal binding protein, Perisplasm, structural genomics
A
B
A
ALA
1
A
ALA
1
A
VAL
70
A
VAL
70
5
B
ALA
1
B
ALA
1
B
VAL
70
B
VAL
70
5
ZP_00026552
GB
1
20
22980851
ATQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVKQ
20
91
1OSD
1
72
22980851
A
1
1
72
20
91
1OSD
1
72
22980851
B
1
1
72
4
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
VAL
31
A
VAL
31
A
THR
37
A
THR
37
A
GLN
42
A
GLN
42
A
ASP
48
A
ASP
48
A
THR
2
A
THR
2
A
SER
8
A
SER
8
A
SER
69
A
SER
69
A
VAL
70
A
VAL
70
B
VAL
31
B
VAL
31
B
THR
37
B
THR
37
B
GLN
42
B
GLN
42
B
ASP
48
B
ASP
48
B
THR
2
B
THR
2
B
SER
8
B
SER
8
B
SER
69
B
SER
69
B
VAL
70
B
VAL
70
19
P 21 21 21