0.010047
0.000000
0.000000
0.000000
0.009335
0.000000
0.000000
0.000000
0.014450
0.00000
0.00000
0.00000
Mi, L.Z.
Devarakonda, S.
Harp, J.M.
Han, Q.
Pellicciari, R.
Willson, T.M.
Khorasanizadeh, S.
Rastinejad, F.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
90.00
99.536
107.129
69.203
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C26 H44 O4
420.625
6-ETHYL-CHENODEOXYCHOLIC ACID
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C24 H40 O4
392.572
ISO-URSODEOXYCHOLIC ACID
non-polymer
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
C
N
75
N
C
N
76
R
C
N
77
N
O
N
78
N
C
N
79
S
C
N
80
R
C
N
81
R
C
N
82
N
O
N
83
S
C
N
84
S
C
N
85
S
C
N
86
N
C
N
87
N
C
N
88
R
C
N
89
S
C
N
90
N
C
N
91
N
C
N
92
R
C
N
93
N
C
N
94
N
C
N
95
R
C
N
96
N
C
N
97
N
C
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
C
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
N
N
149
R
C
N
150
N
C
N
151
N
O
N
152
N
C
N
153
N
S
N
154
N
O
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
N
N
163
S
C
N
164
N
C
N
165
N
O
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
N
N
171
N
O
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
N
N
183
S
C
N
184
N
C
N
185
N
O
N
186
N
C
N
187
N
C
N
188
N
C
N
189
N
O
N
190
N
O
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
N
N
202
N
C
N
203
N
C
N
204
N
O
N
205
N
O
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
N
N
212
S
C
N
213
N
C
N
214
N
O
N
215
N
C
Y
216
N
C
Y
217
N
N
Y
218
N
C
Y
219
N
C
Y
220
N
N
N
221
N
O
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
O
N
233
N
H
N
234
N
H
N
235
N
N
N
236
S
C
N
237
N
C
N
238
N
O
N
239
S
C
N
240
N
C
N
241
N
C
N
242
N
C
N
243
N
O
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
C
N
258
S
C
N
259
N
C
N
260
N
C
N
261
R
C
N
262
S
C
N
263
N
C
N
264
N
C
N
265
R
C
N
266
N
C
N
267
N
C
N
268
N
O
N
269
N
O
N
270
N
C
N
271
R
C
N
272
N
C
N
273
N
C
N
274
N
C
N
275
N
C
N
276
S
C
N
277
N
C
N
278
N
O
N
279
N
O
N
280
S
C
N
281
N
C
N
282
S
C
N
283
R
C
N
284
S
C
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
N
N
326
S
C
N
327
N
C
N
328
N
O
N
329
N
C
N
330
N
C
N
331
N
C
N
332
N
C
N
333
N
O
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
N
N
348
S
C
N
349
N
C
N
350
N
O
N
351
N
C
N
352
N
C
N
353
N
C
N
354
N
C
N
355
N
N
N
356
N
O
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
S
N
379
N
C
N
380
N
O
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
N
N
393
S
C
N
394
N
C
N
395
N
O
N
396
N
C
Y
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
C
Y
401
N
C
Y
402
N
C
N
403
N
O
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
N
N
416
S
C
N
417
N
C
N
418
N
O
N
419
N
C
N
420
N
C
N
421
N
C
N
422
N
O
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
N
N
433
S
C
N
434
N
C
N
435
N
O
N
436
N
C
N
437
N
O
N
438
N
O
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
N
N
447
S
C
N
448
N
C
N
449
N
O
N
450
R
C
N
451
N
O
N
452
N
C
N
453
N
O
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
N
N
464
S
C
N
465
N
C
N
466
N
O
N
467
N
C
Y
468
N
C
Y
469
N
C
Y
470
N
C
Y
471
N
N
Y
472
N
C
Y
473
N
C
Y
474
N
C
Y
475
N
C
Y
476
N
C
N
477
N
O
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
H
N
486
N
H
N
487
N
H
N
488
N
H
N
489
N
H
N
490
N
N
N
491
S
C
N
492
N
C
N
493
N
O
N
494
N
C
Y
495
N
C
Y
496
N
C
Y
497
N
C
Y
498
N
C
Y
499
N
C
Y
500
N
C
N
501
N
O
N
502
N
O
N
503
N
H
N
504
N
H
N
505
N
H
N
506
N
H
N
507
N
H
N
508
N
H
N
509
N
H
N
510
N
H
N
511
N
H
N
512
N
H
N
513
N
H
N
514
N
N
N
515
S
C
N
516
N
C
N
517
N
O
N
518
N
C
N
519
N
C
N
520
N
C
N
521
N
O
N
522
N
H
N
523
N
H
N
524
N
H
N
525
N
H
N
526
N
H
N
527
N
H
N
528
N
H
N
529
N
H
N
530
N
H
N
531
N
H
N
532
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
doub
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
doub
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
doub
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
doub
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
doub
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
doub
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
Y
217
N
sing
Y
218
N
doub
Y
219
N
doub
N
220
N
sing
Y
221
N
sing
N
222
N
sing
Y
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
doub
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
doub
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
doub
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
doub
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
doub
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
doub
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
Y
396
N
doub
Y
397
N
sing
Y
398
N
sing
N
399
N
sing
Y
400
N
doub
N
401
N
sing
Y
402
N
doub
N
403
N
sing
Y
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
doub
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
doub
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
doub
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
doub
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
Y
465
N
doub
Y
466
N
sing
Y
467
N
sing
N
468
N
sing
Y
469
N
doub
Y
470
N
sing
Y
471
N
sing
N
472
N
sing
Y
473
N
sing
Y
474
N
doub
N
475
N
sing
Y
476
N
doub
N
477
N
sing
Y
478
N
sing
N
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
doub
N
489
N
sing
N
490
N
sing
N
491
N
sing
N
492
N
sing
Y
493
N
doub
Y
494
N
sing
Y
495
N
sing
N
496
N
sing
Y
497
N
doub
N
498
N
sing
Y
499
N
doub
N
500
N
sing
Y
501
N
sing
N
502
N
sing
N
503
N
sing
N
504
N
sing
N
505
N
sing
N
506
N
sing
N
507
N
sing
N
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
sing
N
512
N
doub
N
513
N
sing
N
514
N
sing
N
515
N
sing
N
516
N
sing
N
517
N
sing
N
518
N
sing
N
519
N
sing
N
520
N
sing
N
521
N
sing
N
522
N
sing
N
523
N
sing
US
Mol.Cell
MOCEFL
2168
1097-2765
11
1093
1100
10.1016/S1097-2765(03)00112-6
12718893
Structural Basis for Bile Acid Binding and Activation of the Nuclear Receptor FXR
2003
10.2210/pdb1ot7/pdb
pdb_00001ot7
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2002-10-25
ADSC QUANTUM 4
Si 111 CHANNEL
SINGLE WAVELENGTH
M
x-ray
1
1.0670
1.0
X4A
NSLS
1.0670
SYNCHROTRON
NSLS BEAMLINE X4A
26752.787
Bile Acid Receptor
ligand binding domain
2
man
polymer
1464.664
dodecamer peptide fragment of RPGR-interacting protein 1
GRIP1 NID3
3
syn
polymer
420.625
6-ETHYL-CHENODEOXYCHOLIC ACID
1
syn
non-polymer
392.572
ISO-URSODEOXYCHOLIC ACID
1
syn
non-polymer
18.015
water
28
nat
water
FXR; Farnesoid X-activated receptor; Farnesol receptor HRR-1;
Retinoid X receptor-interacting protein 14; RXR-interacting protein 14
no
no
TELTVDQQTLLDYIMDSYSKQRMPQEITNKILKEEFSAEENFLILTEMATSHVQILVEFTKRLPGFQTLDHEDQIALLKG
SAVEAMFLRSAEIFNKKLPAGHADLLEERIRKSGISDEYITPMFSFYKSVGELKMTQEEYALLTAIVILSPDRQYIKDRE
AVEKLQEPLLDVLQKLCKIYQPENPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKFTPLLCEIWDV
TELTVDQQTLLDYIMDSYSKQRMPQEITNKILKEEFSAEENFLILTEMATSHVQILVEFTKRLPGFQTLDHEDQIALLKG
SAVEAMFLRSAEIFNKKLPAGHADLLEERIRKSGISDEYITPMFSFYKSVGELKMTQEEYALLTAIVILSPDRQYIKDRE
AVEKLQEPLLDVLQKLCKIYQPENPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKFTPLLCEIWDV
A,B
polypeptide(L)
no
no
ENALLRYLLDKD
ENALLRYLLDKD
C,D,E
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Norway rat
Rattus
Escherichia
Escherichia coli
sample
NR1H4
10116
Rattus norvegicus
469008
Escherichia coli BL21(DE3)
BL21(DE3)
plasmid
pET-16b
1
3.18
61.0
VAPOR DIFFUSION, HANGING DROP
6.4
PEG 8000, Ethylene glycol, PIPES, Ammonium Sulfate, pH 6.4, VAPOR DIFFUSION, HANGING DROP, temperature 282K
282
chem_comp_atom
chem_comp_bond
database_2
struct_site
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
1
0
2004-03-23
1
1
2008-04-02
1
2
2011-07-13
1
3
2024-02-14
1
4
2024-04-03
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2003-03-21
REL
REL
CHC
6-ETHYL-CHENODEOXYCHOLIC ACID
IU5
ISO-URSODEOXYCHOLIC ACID
HOH
water
This sequence occurs naturally in humans
sample
RAR LBD
Other
experimental model
IU6
1001
3
CHC
CHC
1001
A
IU5
1002
4
IU5
IU5
1002
B
HOH
4
5
HOH
HOH
4
A
HOH
10
5
HOH
HOH
10
A
HOH
13
5
HOH
HOH
13
A
HOH
14
5
HOH
HOH
14
A
HOH
16
5
HOH
HOH
16
A
HOH
18
5
HOH
HOH
18
A
HOH
20
5
HOH
HOH
20
A
HOH
25
5
HOH
HOH
25
A
HOH
28
5
HOH
HOH
28
A
HOH
1
5
HOH
HOH
1
B
HOH
2
5
HOH
HOH
2
B
HOH
3
5
HOH
HOH
3
B
HOH
5
5
HOH
HOH
5
B
HOH
6
5
HOH
HOH
6
B
HOH
7
5
HOH
HOH
7
B
HOH
8
5
HOH
HOH
8
B
HOH
9
5
HOH
HOH
9
B
HOH
11
5
HOH
HOH
11
B
HOH
15
5
HOH
HOH
15
B
HOH
19
5
HOH
HOH
19
B
HOH
21
5
HOH
HOH
21
B
HOH
22
5
HOH
HOH
22
B
HOH
24
5
HOH
HOH
24
B
HOH
26
5
HOH
HOH
26
B
HOH
27
5
HOH
HOH
27
B
HOH
12
5
HOH
HOH
13
D
HOH
17
5
HOH
HOH
14
D
HOH
23
5
HOH
HOH
15
D
THR
240
n
1
THR
240
A
GLU
241
n
2
GLU
241
A
LEU
242
n
3
LEU
242
A
THR
243
n
4
THR
243
A
VAL
244
n
5
VAL
244
A
ASP
245
n
6
ASP
245
A
GLN
246
n
7
GLN
246
A
GLN
247
n
8
GLN
247
A
THR
248
n
9
THR
248
A
LEU
249
n
10
LEU
249
A
LEU
250
n
11
LEU
250
A
ASP
251
n
12
ASP
251
A
TYR
252
n
13
TYR
252
A
ILE
253
n
14
ILE
253
A
MET
254
n
15
MET
254
A
ASP
255
n
16
ASP
255
A
SER
256
n
17
SER
256
A
TYR
257
n
18
TYR
257
A
SER
258
n
19
SER
258
A
LYS
259
n
20
LYS
259
A
GLN
260
n
21
GLN
260
A
ARG
261
n
22
ARG
261
A
MET
262
n
23
MET
262
A
PRO
263
n
24
PRO
263
A
GLN
264
n
25
GLN
264
A
GLU
265
n
26
GLU
265
A
ILE
266
n
27
ILE
266
A
THR
267
n
28
THR
267
A
ASN
268
n
29
ASN
268
A
LYS
269
n
30
LYS
269
A
ILE
270
n
31
ILE
270
A
LEU
271
n
32
LEU
271
A
LYS
272
n
33
LYS
272
A
GLU
273
n
34
GLU
273
A
GLU
274
n
35
GLU
274
A
PHE
275
n
36
PHE
275
A
SER
276
n
37
SER
276
A
ALA
277
n
38
ALA
277
A
GLU
278
n
39
GLU
278
A
GLU
279
n
40
GLU
279
A
ASN
280
n
41
ASN
280
A
PHE
281
n
42
PHE
281
A
LEU
282
n
43
LEU
282
A
ILE
283
n
44
ILE
283
A
LEU
284
n
45
LEU
284
A
THR
285
n
46
THR
285
A
GLU
286
n
47
GLU
286
A
MET
287
n
48
MET
287
A
ALA
288
n
49
ALA
288
A
THR
289
n
50
THR
289
A
SER
290
n
51
SER
290
A
HIS
291
n
52
HIS
291
A
VAL
292
n
53
VAL
292
A
GLN
293
n
54
GLN
293
A
ILE
294
n
55
ILE
294
A
LEU
295
n
56
LEU
295
A
VAL
296
n
57
VAL
296
A
GLU
297
n
58
GLU
297
A
PHE
298
n
59
PHE
298
A
THR
299
n
60
THR
299
A
LYS
300
n
61
LYS
300
A
ARG
301
n
62
ARG
301
A
LEU
302
n
63
LEU
302
A
PRO
303
n
64
PRO
303
A
GLY
304
n
65
GLY
304
A
PHE
305
n
66
PHE
305
A
GLN
306
n
67
GLN
306
A
THR
307
n
68
THR
307
A
LEU
308
n
69
LEU
308
A
ASP
309
n
70
ASP
309
A
HIS
310
n
71
HIS
310
A
GLU
311
n
72
GLU
311
A
ASP
312
n
73
ASP
312
A
GLN
313
n
74
GLN
313
A
ILE
314
n
75
ILE
314
A
ALA
315
n
76
ALA
315
A
LEU
316
n
77
LEU
316
A
LEU
317
n
78
LEU
317
A
LYS
318
n
79
LYS
318
A
GLY
319
n
80
GLY
319
A
SER
320
n
81
SER
320
A
ALA
321
n
82
ALA
321
A
VAL
322
n
83
VAL
322
A
GLU
323
n
84
GLU
323
A
ALA
324
n
85
ALA
324
A
MET
325
n
86
MET
325
A
PHE
326
n
87
PHE
326
A
LEU
327
n
88
LEU
327
A
ARG
328
n
89
ARG
328
A
SER
329
n
90
SER
329
A
ALA
330
n
91
ALA
330
A
GLU
331
n
92
GLU
331
A
ILE
332
n
93
ILE
332
A
PHE
333
n
94
PHE
333
A
ASN
334
n
95
ASN
334
A
LYS
335
n
96
LYS
335
A
LYS
336
n
97
LYS
336
A
LEU
337
n
98
LEU
337
A
PRO
338
n
99
PRO
338
A
ALA
339
n
100
ALA
339
A
GLY
340
n
101
GLY
340
A
HIS
341
n
102
HIS
341
A
ALA
342
n
103
ALA
342
A
ASP
343
n
104
ASP
343
A
LEU
344
n
105
LEU
344
A
LEU
345
n
106
LEU
345
A
GLU
346
n
107
GLU
346
A
GLU
347
n
108
GLU
347
A
ARG
348
n
109
ARG
348
A
ILE
349
n
110
ILE
349
A
ARG
350
n
111
ARG
350
A
LYS
351
n
112
LYS
351
A
SER
352
n
113
SER
352
A
GLY
353
n
114
GLY
353
A
ILE
354
n
115
ILE
354
A
SER
355
n
116
SER
355
A
ASP
356
n
117
ASP
356
A
GLU
357
n
118
GLU
357
A
TYR
358
n
119
TYR
358
A
ILE
359
n
120
ILE
359
A
THR
360
n
121
THR
360
A
PRO
361
n
122
PRO
361
A
MET
362
n
123
MET
362
A
PHE
363
n
124
PHE
363
A
SER
364
n
125
SER
364
A
PHE
365
n
126
PHE
365
A
TYR
366
n
127
TYR
366
A
LYS
367
n
128
LYS
367
A
SER
368
n
129
SER
368
A
VAL
369
n
130
VAL
369
A
GLY
370
n
131
GLY
370
A
GLU
371
n
132
GLU
371
A
LEU
372
n
133
LEU
372
A
LYS
373
n
134
LYS
373
A
MET
374
n
135
MET
374
A
THR
375
n
136
THR
375
A
GLN
376
n
137
GLN
376
A
GLU
377
n
138
GLU
377
A
GLU
378
n
139
GLU
378
A
TYR
379
n
140
TYR
379
A
ALA
380
n
141
ALA
380
A
LEU
381
n
142
LEU
381
A
LEU
382
n
143
LEU
382
A
THR
383
n
144
THR
383
A
ALA
384
n
145
ALA
384
A
ILE
385
n
146
ILE
385
A
VAL
386
n
147
VAL
386
A
ILE
387
n
148
ILE
387
A
LEU
388
n
149
LEU
388
A
SER
389
n
150
SER
389
A
PRO
390
n
151
PRO
390
A
ASP
391
n
152
ASP
391
A
ARG
392
n
153
ARG
392
A
GLN
393
n
154
GLN
393
A
TYR
394
n
155
TYR
394
A
ILE
395
n
156
ILE
395
A
LYS
396
n
157
LYS
396
A
ASP
397
n
158
ASP
397
A
ARG
398
n
159
ARG
398
A
GLU
399
n
160
GLU
399
A
ALA
400
n
161
ALA
400
A
VAL
401
n
162
VAL
401
A
GLU
402
n
163
GLU
402
A
LYS
403
n
164
LYS
403
A
LEU
404
n
165
LEU
404
A
GLN
405
n
166
GLN
405
A
GLU
406
n
167
GLU
406
A
PRO
407
n
168
PRO
407
A
LEU
408
n
169
LEU
408
A
LEU
409
n
170
LEU
409
A
ASP
410
n
171
ASP
410
A
VAL
411
n
172
VAL
411
A
LEU
412
n
173
LEU
412
A
GLN
413
n
174
GLN
413
A
LYS
414
n
175
LYS
414
A
LEU
415
n
176
LEU
415
A
CYS
416
n
177
CYS
416
A
LYS
417
n
178
LYS
417
A
ILE
418
n
179
ILE
418
A
TYR
419
n
180
TYR
419
A
GLN
420
n
181
GLN
420
A
PRO
421
n
182
PRO
421
A
GLU
422
n
183
GLU
422
A
ASN
423
n
184
ASN
423
A
PRO
424
n
185
PRO
424
A
GLN
425
n
186
GLN
425
A
HIS
426
n
187
HIS
426
A
PHE
427
n
188
PHE
427
A
ALA
428
n
189
ALA
428
A
CYS
429
n
190
CYS
429
A
LEU
430
n
191
LEU
430
A
LEU
431
n
192
LEU
431
A
GLY
432
n
193
GLY
432
A
ARG
433
n
194
ARG
433
A
LEU
434
n
195
LEU
434
A
THR
435
n
196
THR
435
A
GLU
436
n
197
GLU
436
A
LEU
437
n
198
LEU
437
A
ARG
438
n
199
ARG
438
A
THR
439
n
200
THR
439
A
PHE
440
n
201
PHE
440
A
ASN
441
n
202
ASN
441
A
HIS
442
n
203
HIS
442
A
HIS
443
n
204
HIS
443
A
HIS
444
n
205
HIS
444
A
ALA
445
n
206
ALA
445
A
GLU
446
n
207
GLU
446
A
MET
447
n
208
MET
447
A
LEU
448
n
209
LEU
448
A
MET
449
n
210
MET
449
A
SER
450
n
211
SER
450
A
TRP
451
n
212
TRP
451
A
ARG
452
n
213
ARG
452
A
VAL
453
n
214
VAL
453
A
ASN
454
n
215
ASN
454
A
ASP
455
n
216
ASP
455
A
HIS
456
n
217
HIS
456
A
LYS
457
n
218
LYS
457
A
PHE
458
n
219
PHE
458
A
THR
459
n
220
THR
459
A
PRO
460
n
221
PRO
460
A
LEU
461
n
222
LEU
461
A
LEU
462
n
223
LEU
462
A
CYS
463
n
224
CYS
463
A
GLU
464
n
225
GLU
464
A
ILE
465
n
226
ILE
465
A
TRP
466
n
227
TRP
466
A
ASP
467
n
228
ASP
467
A
VAL
468
n
229
VAL
468
A
THR
240
n
1
THR
240
B
GLU
241
n
2
GLU
241
B
LEU
242
n
3
LEU
242
B
THR
243
n
4
THR
243
B
VAL
244
n
5
VAL
244
B
ASP
245
n
6
ASP
245
B
GLN
246
n
7
GLN
246
B
GLN
247
n
8
GLN
247
B
THR
248
n
9
THR
248
B
LEU
249
n
10
LEU
249
B
LEU
250
n
11
LEU
250
B
ASP
251
n
12
ASP
251
B
TYR
252
n
13
TYR
252
B
ILE
253
n
14
ILE
253
B
MET
254
n
15
MET
254
B
ASP
255
n
16
ASP
255
B
SER
256
n
17
SER
256
B
TYR
257
n
18
TYR
257
B
SER
258
n
19
SER
258
B
LYS
259
n
20
LYS
259
B
GLN
260
n
21
GLN
260
B
ARG
261
n
22
ARG
261
B
MET
262
n
23
MET
262
B
PRO
263
n
24
PRO
263
B
GLN
264
n
25
GLN
264
B
GLU
265
n
26
GLU
265
B
ILE
266
n
27
ILE
266
B
THR
267
n
28
THR
267
B
ASN
268
n
29
ASN
268
B
LYS
269
n
30
LYS
269
B
ILE
270
n
31
ILE
270
B
LEU
271
n
32
LEU
271
B
LYS
272
n
33
LYS
272
B
GLU
273
n
34
GLU
273
B
GLU
274
n
35
GLU
274
B
PHE
275
n
36
PHE
275
B
SER
276
n
37
SER
276
B
ALA
277
n
38
ALA
277
B
GLU
278
n
39
GLU
278
B
GLU
279
n
40
GLU
279
B
ASN
280
n
41
ASN
280
B
PHE
281
n
42
PHE
281
B
LEU
282
n
43
LEU
282
B
ILE
283
n
44
ILE
283
B
LEU
284
n
45
LEU
284
B
THR
285
n
46
THR
285
B
GLU
286
n
47
GLU
286
B
MET
287
n
48
MET
287
B
ALA
288
n
49
ALA
288
B
THR
289
n
50
THR
289
B
SER
290
n
51
SER
290
B
HIS
291
n
52
HIS
291
B
VAL
292
n
53
VAL
292
B
GLN
293
n
54
GLN
293
B
ILE
294
n
55
ILE
294
B
LEU
295
n
56
LEU
295
B
VAL
296
n
57
VAL
296
B
GLU
297
n
58
GLU
297
B
PHE
298
n
59
PHE
298
B
THR
299
n
60
THR
299
B
LYS
300
n
61
LYS
300
B
ARG
301
n
62
ARG
301
B
LEU
302
n
63
LEU
302
B
PRO
303
n
64
PRO
303
B
GLY
304
n
65
GLY
304
B
PHE
305
n
66
PHE
305
B
GLN
306
n
67
GLN
306
B
THR
307
n
68
THR
307
B
LEU
308
n
69
LEU
308
B
ASP
309
n
70
ASP
309
B
HIS
310
n
71
HIS
310
B
GLU
311
n
72
GLU
311
B
ASP
312
n
73
ASP
312
B
GLN
313
n
74
GLN
313
B
ILE
314
n
75
ILE
314
B
ALA
315
n
76
ALA
315
B
LEU
316
n
77
LEU
316
B
LEU
317
n
78
LEU
317
B
LYS
318
n
79
LYS
318
B
GLY
319
n
80
GLY
319
B
SER
320
n
81
SER
320
B
ALA
321
n
82
ALA
321
B
VAL
322
n
83
VAL
322
B
GLU
323
n
84
GLU
323
B
ALA
324
n
85
ALA
324
B
MET
325
n
86
MET
325
B
PHE
326
n
87
PHE
326
B
LEU
327
n
88
LEU
327
B
ARG
328
n
89
ARG
328
B
SER
329
n
90
SER
329
B
ALA
330
n
91
ALA
330
B
GLU
331
n
92
GLU
331
B
ILE
332
n
93
ILE
332
B
PHE
333
n
94
PHE
333
B
ASN
334
n
95
ASN
334
B
LYS
335
n
96
LYS
335
B
LYS
336
n
97
LYS
336
B
LEU
337
n
98
LEU
337
B
PRO
338
n
99
PRO
338
B
ALA
339
n
100
ALA
339
B
GLY
340
n
101
GLY
340
B
HIS
341
n
102
HIS
341
B
ALA
342
n
103
ALA
342
B
ASP
343
n
104
ASP
343
B
LEU
344
n
105
LEU
344
B
LEU
345
n
106
LEU
345
B
GLU
346
n
107
GLU
346
B
GLU
347
n
108
GLU
347
B
ARG
348
n
109
ARG
348
B
ILE
349
n
110
ILE
349
B
ARG
350
n
111
ARG
350
B
LYS
351
n
112
LYS
351
B
SER
352
n
113
SER
352
B
GLY
353
n
114
GLY
353
B
ILE
354
n
115
ILE
354
B
SER
355
n
116
SER
355
B
ASP
356
n
117
ASP
356
B
GLU
357
n
118
GLU
357
B
TYR
358
n
119
TYR
358
B
ILE
359
n
120
ILE
359
B
THR
360
n
121
THR
360
B
PRO
361
n
122
PRO
361
B
MET
362
n
123
MET
362
B
PHE
363
n
124
PHE
363
B
SER
364
n
125
SER
364
B
PHE
365
n
126
PHE
365
B
TYR
366
n
127
TYR
366
B
LYS
367
n
128
LYS
367
B
SER
368
n
129
SER
368
B
VAL
369
n
130
VAL
369
B
GLY
370
n
131
GLY
370
B
GLU
371
n
132
GLU
371
B
LEU
372
n
133
LEU
372
B
LYS
373
n
134
LYS
373
B
MET
374
n
135
MET
374
B
THR
375
n
136
THR
375
B
GLN
376
n
137
GLN
376
B
GLU
377
n
138
GLU
377
B
GLU
378
n
139
GLU
378
B
TYR
379
n
140
TYR
379
B
ALA
380
n
141
ALA
380
B
LEU
381
n
142
LEU
381
B
LEU
382
n
143
LEU
382
B
THR
383
n
144
THR
383
B
ALA
384
n
145
ALA
384
B
ILE
385
n
146
ILE
385
B
VAL
386
n
147
VAL
386
B
ILE
387
n
148
ILE
387
B
LEU
388
n
149
LEU
388
B
SER
389
n
150
SER
389
B
PRO
390
n
151
PRO
390
B
ASP
391
n
152
ASP
391
B
ARG
392
n
153
ARG
392
B
GLN
393
n
154
GLN
393
B
TYR
394
n
155
TYR
394
B
ILE
395
n
156
ILE
395
B
LYS
396
n
157
LYS
396
B
ASP
397
n
158
ASP
397
B
ARG
398
n
159
ARG
398
B
GLU
399
n
160
GLU
399
B
ALA
400
n
161
ALA
400
B
VAL
401
n
162
VAL
401
B
GLU
402
n
163
GLU
402
B
LYS
403
n
164
LYS
403
B
LEU
404
n
165
LEU
404
B
GLN
405
n
166
GLN
405
B
GLU
406
n
167
GLU
406
B
PRO
407
n
168
PRO
407
B
LEU
408
n
169
LEU
408
B
LEU
409
n
170
LEU
409
B
ASP
410
n
171
ASP
410
B
VAL
411
n
172
VAL
411
B
LEU
412
n
173
LEU
412
B
GLN
413
n
174
GLN
413
B
LYS
414
n
175
LYS
414
B
LEU
415
n
176
LEU
415
B
CYS
416
n
177
CYS
416
B
LYS
417
n
178
LYS
417
B
ILE
418
n
179
ILE
418
B
TYR
419
n
180
TYR
419
B
GLN
420
n
181
GLN
420
B
PRO
421
n
182
PRO
421
B
GLU
422
n
183
GLU
422
B
ASN
423
n
184
ASN
423
B
PRO
424
n
185
PRO
424
B
GLN
425
n
186
GLN
425
B
HIS
426
n
187
HIS
426
B
PHE
427
n
188
PHE
427
B
ALA
428
n
189
ALA
428
B
CYS
429
n
190
CYS
429
B
LEU
430
n
191
LEU
430
B
LEU
431
n
192
LEU
431
B
GLY
432
n
193
GLY
432
B
ARG
433
n
194
ARG
433
B
LEU
434
n
195
LEU
434
B
THR
435
n
196
THR
435
B
GLU
436
n
197
GLU
436
B
LEU
437
n
198
LEU
437
B
ARG
438
n
199
ARG
438
B
THR
439
n
200
THR
439
B
PHE
440
n
201
PHE
440
B
ASN
441
n
202
ASN
441
B
HIS
442
n
203
HIS
442
B
HIS
443
n
204
HIS
443
B
HIS
444
n
205
HIS
444
B
ALA
445
n
206
ALA
445
B
GLU
446
n
207
GLU
446
B
MET
447
n
208
MET
447
B
LEU
448
n
209
LEU
448
B
MET
449
n
210
MET
449
B
SER
450
n
211
SER
450
B
TRP
451
n
212
TRP
451
B
ARG
452
n
213
ARG
452
B
VAL
453
n
214
VAL
453
B
ASN
454
n
215
ASN
454
B
ASP
455
n
216
ASP
455
B
HIS
456
n
217
HIS
456
B
LYS
457
n
218
LYS
457
B
PHE
458
n
219
PHE
458
B
THR
459
n
220
THR
459
B
PRO
460
n
221
PRO
460
B
LEU
461
n
222
LEU
461
B
LEU
462
n
223
LEU
462
B
CYS
463
n
224
CYS
463
B
GLU
464
n
225
GLU
464
B
ILE
465
n
226
ILE
465
B
TRP
466
n
227
TRP
466
B
ASP
467
n
228
ASP
467
B
VAL
468
n
229
VAL
468
B
GLU
1
n
1
GLU
1
C
ASN
2
n
2
ASN
2
C
ALA
3
n
3
ALA
3
C
LEU
4
n
4
LEU
4
C
LEU
5
n
5
LEU
5
C
ARG
6
n
6
ARG
6
C
TYR
7
n
7
TYR
7
C
LEU
8
n
8
LEU
8
C
LEU
9
n
9
LEU
9
C
ASP
10
n
10
ASP
10
C
LYS
11
n
11
LYS
11
C
ASP
12
n
12
ASP
12
C
GLU
1
n
1
GLU
1
D
ASN
2
n
2
ASN
2
D
ALA
3
n
3
ALA
3
D
LEU
4
n
4
LEU
4
D
LEU
5
n
5
LEU
5
D
ARG
6
n
6
ARG
6
D
TYR
7
n
7
TYR
7
D
LEU
8
n
8
LEU
8
D
LEU
9
n
9
LEU
9
D
ASP
10
n
10
ASP
10
D
LYS
11
n
11
LYS
11
D
ASP
12
n
12
ASP
12
D
GLU
1
n
1
GLU
1
E
ASN
2
n
2
ASN
2
E
ALA
3
n
3
ALA
3
E
LEU
4
n
4
LEU
4
E
LEU
5
n
5
LEU
5
E
ARG
6
n
6
ARG
6
E
TYR
7
n
7
TYR
7
E
LEU
8
n
8
LEU
8
E
LEU
9
n
9
LEU
9
E
ASP
10
n
10
ASP
10
E
LYS
11
n
11
LYS
11
E
ASP
12
n
12
ASP
12
E
author_defined_assembly
2
dimeric
author_defined_assembly
3
trimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
OG1
THR
240
A
OG1
THR
1
1
Y
1
A
CG2
THR
240
A
CG2
THR
1
1
Y
1
B
OG1
THR
240
B
OG1
THR
1
1
Y
1
B
CG2
THR
240
B
CG2
THR
1
1
Y
1
C
CG
ASP
12
C
CG
ASP
12
1
Y
1
C
OD1
ASP
12
C
OD1
ASP
12
1
Y
1
C
OD2
ASP
12
C
OD2
ASP
12
1
Y
1
E
CG
ASP
12
E
CG
ASP
12
1
Y
1
E
OD1
ASP
12
E
OD1
ASP
12
1
Y
1
E
OD2
ASP
12
E
OD2
ASP
12
1
Y
1
B
O1B
IU5
1002
G
O1B
IU5
1
1
N
1
B
C7
IU5
1002
WRONG HAND
1
A
A
O
OG
LEU
SER
316
320
2.12
1
A
A
O
OG
MET
SER
325
329
2.14
1
B
B
O
NH2
GLY
ARG
319
392
2.18
1
A
A
C
N
TRP
ARG
451
452
3.72
1
A
GLU
241
-63.02
-146.31
1
A
LEU
242
106.64
88.64
1
A
THR
248
-60.11
-71.94
1
A
SER
258
-98.63
35.07
1
A
LYS
259
-91.57
-76.35
1
A
GLN
260
-43.57
-77.04
1
A
ARG
261
73.16
151.75
1
A
THR
267
-62.66
-72.79
1
A
GLU
273
63.78
155.64
1
A
PHE
275
7.48
-130.44
1
A
SER
276
72.76
116.59
1
A
PRO
303
-36.68
134.56
1
A
ALA
321
-26.73
-57.22
1
A
PHE
333
-51.88
-82.72
1
A
LYS
335
73.25
126.65
1
A
LYS
336
38.48
104.27
1
A
PRO
338
-65.35
14.77
1
A
ALA
342
174.34
-49.65
1
A
LYS
351
64.11
80.67
1
A
SER
352
-157.24
29.77
1
A
ASP
356
-57.39
1.25
1
A
GLN
393
-34.78
-31.40
1
A
ASN
423
-89.88
-88.90
1
A
PRO
424
-92.15
-86.96
1
A
GLN
425
68.13
-23.16
1
A
ARG
433
-39.71
-30.91
1
A
MET
449
-64.25
0.02
1
A
ASN
454
67.65
-81.69
1
A
ASP
455
-175.30
10.94
1
A
ASP
467
70.42
-48.47
1
B
GLU
241
-69.47
-173.26
1
B
MET
262
39.27
45.34
1
B
GLN
264
90.87
87.34
1
B
THR
267
-109.82
-68.23
1
B
LYS
272
-142.84
17.64
1
B
SER
276
-94.55
46.83
1
B
ALA
277
-97.33
-147.16
1
B
VAL
292
-68.18
-70.24
1
B
LYS
300
-52.53
-5.94
1
B
PRO
303
-7.64
-78.99
1
B
PHE
305
-16.91
-49.50
1
B
LEU
308
-47.74
156.35
1
B
ALA
321
-38.98
-84.41
1
B
ASN
334
62.98
-2.43
1
B
LYS
335
-49.81
160.47
1
B
LEU
337
115.27
-53.60
1
B
PRO
338
-28.70
138.40
1
B
ALA
339
109.15
-20.93
1
B
ASP
343
-38.51
-38.98
1
B
ARG
350
-70.88
23.73
1
B
LYS
351
-149.25
38.11
1
B
LEU
372
-90.63
47.04
1
B
LYS
373
-16.69
82.59
1
B
LEU
388
-97.79
57.78
1
B
ASP
391
-95.03
54.58
1
B
TYR
394
89.84
-10.86
1
B
GLN
420
-143.86
57.82
1
B
ASN
423
-115.60
67.70
1
B
PRO
424
-54.21
3.43
1
B
ARG
452
-152.93
-52.07
1
B
ASN
454
65.51
151.18
1
B
ASP
455
41.39
13.86
1
B
GLU
464
-73.23
-70.08
1
B
ASP
467
132.40
-31.56
1
C
ASN
2
27.90
44.93
1
C
LYS
11
-9.79
100.43
1
D
LYS
11
-60.76
-99.49
1
E
ASN
2
-60.65
97.50
PROTEIN_REP.PARAM
PROTEIN.TOP
WATER_REP.PARAM
WATER.TOP
6ECDCA.PAR
6ECDCA.TOP
7ACDCA.PAR
7ACDCA.TOP
82.9
-9.90
0.00
0.00
21.86
0.00
-11.96
0.279
0.009
0.233
0.236
0.2331
2.90
19.96
880
16938
12771
6.9
75.4
RANDOM
1
GROUP
THROUGHOUT
3.0
MOLECULAR REPLACEMENT
RAR LBD
Engh & Huber
FLAT MODEL
18.1809
0.244014
0.55
0.46
2.90
19.96
28
4140
57
0
4055
0.009
1.5
19.7
0.95
0.383
0.052
0.371
3.03
55
862
862
8
6.0
43.9
44.5
2.90
50.0
1OT7
17120
16726
2.5
0.071
1
14.41
4.7
97.7
2.90
3.00
2.0
1612
0.458
4.8
96.5
data collection
HKL-2000
data scaling
SCALEPACK
phasing
MOLREP
refinement
CNS
1.1
data reduction
HKL-2000
Structural Basis for 3-deoxy-CDCA Binding and Activation of FXR
1
N
N
1
N
N
2
N
N
2
N
N
2
N
N
3
N
N
4
N
N
5
N
N
5
N
N
5
N
N
The biological assembly is one of the subunits(A or B).
A
THR
243
A
THR
4
HELX_P
A
SER
258
A
SER
19
1
1
16
A
PRO
263
A
PRO
24
HELX_P
A
LYS
269
A
LYS
30
1
2
7
A
SER
276
A
SER
37
HELX_P
A
THR
299
A
THR
60
1
3
24
A
LYS
300
A
LYS
61
HELX_P
A
LEU
302
A
LEU
63
5
4
3
A
GLY
304
A
GLY
65
HELX_P
A
LEU
308
A
LEU
69
5
5
5
A
ASP
309
A
ASP
70
HELX_P
A
ASN
334
A
ASN
95
1
6
26
A
ALA
342
A
ALA
103
HELX_P
A
ARG
350
A
ARG
111
1
7
9
A
TYR
358
A
TYR
119
HELX_P
A
LEU
372
A
LEU
133
1
8
15
A
THR
375
A
THR
136
HELX_P
A
LEU
388
A
LEU
149
1
9
14
A
ARG
398
A
ARG
159
HELX_P
A
GLN
420
A
GLN
181
1
10
23
A
GLN
425
A
GLN
186
HELX_P
A
MET
449
A
MET
210
1
11
25
A
THR
459
A
THR
220
HELX_P
A
TRP
466
A
TRP
227
1
12
8
B
THR
243
B
THR
4
HELX_P
B
LYS
259
B
LYS
20
1
13
17
B
GLN
264
B
GLN
25
HELX_P
B
LYS
269
B
LYS
30
1
14
6
B
LYS
269
B
LYS
30
HELX_P
B
GLU
274
B
GLU
35
1
15
6
B
GLU
278
B
GLU
39
HELX_P
B
LYS
300
B
LYS
61
1
16
23
B
HIS
310
B
HIS
71
HELX_P
B
GLY
319
B
GLY
80
1
17
10
B
SER
320
B
SER
81
HELX_P
B
PHE
333
B
PHE
94
1
18
14
B
HIS
341
B
HIS
102
HELX_P
B
ARG
350
B
ARG
111
1
19
10
B
SER
355
B
SER
116
HELX_P
B
GLY
370
B
GLY
131
1
20
16
B
GLU
371
B
GLU
132
HELX_P
B
LYS
373
B
LYS
134
5
21
3
B
THR
375
B
THR
136
HELX_P
B
LEU
388
B
LEU
149
1
22
14
B
ASP
397
B
ASP
158
HELX_P
B
GLN
420
B
GLN
181
1
23
24
B
GLN
425
B
GLN
186
HELX_P
B
TRP
451
B
TRP
212
1
24
27
B
THR
459
B
THR
220
HELX_P
B
ASP
467
B
ASP
228
1
25
9
C
ASN
2
C
ASN
2
HELX_P
C
ASP
10
C
ASP
10
1
26
9
D
ASN
2
D
ASN
2
HELX_P
D
LEU
8
D
LEU
8
1
27
7
E
LEU
4
E
LEU
4
HELX_P
E
LEU
9
E
LEU
9
1
28
6
HORMONE/GROWTH FACTOR RECEPTOR
BILE ACID, NUCLEAR RECEPTOR, COACTIVATOR, LIGAND BINDING DOMAIN, FXR, HORMONE-GROWTH FACTOR RECEPTOR COMPLEX
A
ASN
423
A
ASN
184
1
A
PRO
424
A
PRO
185
3.01
NR1H4_RAT
UNP
1
240
Q62735
TELTVDQQTLLDYIMDSYSKQRMPQEITNKILKEEFSAEENFLILTEMATSHVQILVEFTKRLPGFQTLDHEDQIALLKG
SAVEAMFLRSAEIFNKKLPAGHADLLEERIRKSGISDEYITPMFSFYKSVGELKMTQEEYALLTAIVILSPDRQYIKDRE
AVEKLQEPLLDVLQKLCKIYQPENPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKFTPLLCEIWDV
1OT7
PDB
2
1OT7
240
468
1OT7
240
468
Q62735
A
1
1
229
240
468
1OT7
240
468
Q62735
B
1
1
229
1
12
1OT7
1
12
1OT7
C
2
1
12
1
12
1OT7
1
12
1OT7
D
2
1
12
1
12
1OT7
1
12
1OT7
E
2
1
12
BINDING SITE FOR RESIDUE IU5 B 1002
B
IU5
1002
Software
13
BINDING SITE FOR RESIDUE CHC A 1001
A
CHC
1001
Software
12
B
MET
287
B
MET
48
13
1_555
B
ALA
288
B
ALA
49
13
1_555
B
HIS
291
B
HIS
52
13
1_555
B
MET
325
B
MET
86
13
1_555
B
PHE
326
B
PHE
87
13
1_555
B
ARG
328
B
ARG
89
13
1_555
B
SER
329
B
SER
90
13
1_555
B
ILE
332
B
ILE
93
13
1_555
B
PHE
333
B
PHE
94
13
1_555
B
ILE
349
B
ILE
110
13
1_555
B
TYR
358
B
TYR
119
13
1_555
B
TYR
366
B
TYR
127
13
1_555
B
HIS
444
B
HIS
205
13
1_555
A
MET
262
A
MET
23
12
1_555
A
ALA
288
A
ALA
49
12
1_555
A
HIS
291
A
HIS
52
12
1_555
A
PHE
326
A
PHE
87
12
1_555
A
ARG
328
A
ARG
89
12
1_555
A
SER
329
A
SER
90
12
1_555
A
ILE
332
A
ILE
93
12
1_555
A
ILE
349
A
ILE
110
12
1_555
A
TYR
358
A
TYR
119
12
1_555
A
PHE
363
A
PHE
124
12
1_555
A
TYR
366
A
TYR
127
12
1_555
A
HIS
444
A
HIS
205
12
1_555
18
orthorhombic
P 21 21 2