0.022077 0.000000 0.000000 0.000000 0.017478 0.000000 0.000000 0.000000 0.011787 0.00000 0.00000 0.00000 Marino, M. Copp, J. Dramsi, S. Chapman, T. van der Geer, P. Cossart, P. Ghosh, P. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 45.296 57.215 84.840 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 R C N 309 N O N 310 N C N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N N Y 330 N C Y 331 N C Y 332 N C Y 333 N C Y 334 N C N 335 N O N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C Y 353 N C Y 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C N 359 N O N 360 N O N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N N N 373 S C N 374 N C N 375 N O N 376 N C N 377 N C N 378 N C N 379 N O N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub Y 322 N sing Y 323 N sing N 324 N sing Y 325 N sing Y 326 N doub N 327 N sing Y 328 N doub N 329 N sing Y 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing Y 345 N doub Y 346 N sing Y 347 N sing N 348 N sing Y 349 N doub N 350 N sing Y 351 N doub N 352 N sing Y 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing US Biochem.Biophys.Res.Commun. BBRCA9 0146 0006-291X 316 379 386 10.1016/j.bbrc.2004.02.064 15020228 Characterization of the calcium-binding sites of Listeria monocytogenes InlB 2004 10.2210/pdb1otm/pdb pdb_00001otm 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 110 1 Osmic IMAGE PLATE 2000-02-11 MARRESEARCH SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU 26128.980 internalin B LRR domain D51A, D59A 1 man polymer 18.015 water 123 nat water no no MGSSHHHHHHSSGLVPRGSHMASETITVSTPIKQIFPDAAFAETIKANLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQ GIQYLPNVTKLFLNGNKLTDIKPLTNLKNLGWLFLDENKIKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLG NNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNKPIN MGSSHHHHHHSSGLVPRGSHMASETITVSTPIKQIFPDAAFAETIKANLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQ GIQYLPNVTKLFLNGNKLTDIKPLTNLKNLGWLFLDENKIKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLG NNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNKPIN A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Listeria Escherichia Escherichia coli sample 1639 Listeria monocytogenes 469008 Escherichia coli BL21(DE3) BL21(DE3) T7 promoter plasmid pet28b (Novagen) 1 2.26 45.09 VAPOR DIFFUSION, HANGING DROP 6.5 Peg 8000, Mes, Calcium acetate, DTT, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K 298 pdbx_unobs_or_zero_occ_atoms software database_2 pdbx_unobs_or_zero_occ_atoms struct_ref_seq_dif chem_comp_atom chem_comp_bond pdbx_initial_refinement_model repository Initial release Version format compliance Version format compliance Advisory Refinement description Advisory Database references Data collection Refinement description 1 0 2004-03-30 1 1 2008-04-29 1 2 2011-07-13 1 3 2017-10-11 1 4 2021-10-27 1 5 2023-08-16 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details Internalin B LRR domain RCSB Y RCSB 2003-03-21 REL REL HOH water 1D0B PDB ENTRY 1d0b PDB experimental model HOH 1 2 HOH HOH 249 A HOH 2 2 HOH HOH 250 A HOH 3 2 HOH HOH 251 A HOH 4 2 HOH HOH 252 A HOH 5 2 HOH HOH 253 A HOH 6 2 HOH HOH 254 A HOH 7 2 HOH HOH 255 A HOH 8 2 HOH HOH 256 A HOH 9 2 HOH HOH 257 A HOH 10 2 HOH HOH 258 A HOH 11 2 HOH HOH 259 A HOH 12 2 HOH HOH 260 A HOH 13 2 HOH HOH 261 A HOH 14 2 HOH HOH 262 A HOH 15 2 HOH HOH 263 A HOH 16 2 HOH HOH 264 A HOH 17 2 HOH HOH 265 A HOH 18 2 HOH HOH 266 A HOH 19 2 HOH HOH 267 A HOH 20 2 HOH HOH 268 A HOH 21 2 HOH HOH 269 A HOH 22 2 HOH HOH 270 A HOH 23 2 HOH HOH 271 A HOH 24 2 HOH HOH 272 A HOH 25 2 HOH HOH 273 A HOH 26 2 HOH HOH 274 A HOH 27 2 HOH HOH 275 A HOH 28 2 HOH HOH 276 A HOH 29 2 HOH HOH 277 A HOH 30 2 HOH HOH 278 A HOH 31 2 HOH HOH 279 A HOH 32 2 HOH HOH 280 A HOH 33 2 HOH HOH 281 A HOH 34 2 HOH HOH 282 A HOH 35 2 HOH HOH 283 A HOH 36 2 HOH HOH 284 A HOH 37 2 HOH HOH 285 A HOH 38 2 HOH HOH 286 A HOH 39 2 HOH HOH 287 A HOH 40 2 HOH HOH 288 A HOH 41 2 HOH HOH 289 A HOH 42 2 HOH HOH 290 A HOH 43 2 HOH HOH 291 A HOH 44 2 HOH HOH 292 A HOH 45 2 HOH HOH 293 A HOH 46 2 HOH HOH 294 A HOH 47 2 HOH HOH 295 A HOH 48 2 HOH HOH 296 A HOH 49 2 HOH HOH 297 A HOH 50 2 HOH HOH 298 A HOH 51 2 HOH HOH 299 A HOH 52 2 HOH HOH 300 A HOH 53 2 HOH HOH 301 A HOH 54 2 HOH HOH 302 A HOH 55 2 HOH HOH 303 A HOH 56 2 HOH HOH 304 A HOH 57 2 HOH HOH 305 A HOH 58 2 HOH HOH 306 A HOH 59 2 HOH HOH 307 A HOH 60 2 HOH HOH 308 A HOH 61 2 HOH HOH 309 A HOH 62 2 HOH HOH 310 A HOH 63 2 HOH HOH 311 A HOH 64 2 HOH HOH 312 A HOH 65 2 HOH HOH 313 A HOH 66 2 HOH HOH 314 A HOH 67 2 HOH HOH 315 A HOH 68 2 HOH HOH 316 A HOH 69 2 HOH HOH 317 A HOH 70 2 HOH HOH 318 A HOH 71 2 HOH HOH 319 A HOH 72 2 HOH HOH 320 A HOH 73 2 HOH HOH 321 A HOH 74 2 HOH HOH 322 A HOH 75 2 HOH HOH 323 A HOH 76 2 HOH HOH 324 A HOH 77 2 HOH HOH 325 A HOH 78 2 HOH HOH 326 A HOH 79 2 HOH HOH 327 A HOH 80 2 HOH HOH 328 A HOH 81 2 HOH HOH 329 A HOH 82 2 HOH HOH 330 A HOH 83 2 HOH HOH 331 A HOH 84 2 HOH HOH 332 A HOH 85 2 HOH HOH 333 A HOH 86 2 HOH HOH 334 A HOH 87 2 HOH HOH 335 A HOH 88 2 HOH HOH 336 A HOH 89 2 HOH HOH 337 A HOH 90 2 HOH HOH 338 A HOH 91 2 HOH HOH 339 A HOH 92 2 HOH HOH 340 A HOH 93 2 HOH HOH 341 A HOH 94 2 HOH HOH 342 A HOH 95 2 HOH HOH 343 A HOH 96 2 HOH HOH 344 A HOH 97 2 HOH HOH 345 A HOH 98 2 HOH HOH 346 A HOH 99 2 HOH HOH 347 A HOH 100 2 HOH HOH 348 A HOH 101 2 HOH HOH 349 A HOH 102 2 HOH HOH 350 A HOH 103 2 HOH HOH 351 A HOH 104 2 HOH HOH 352 A HOH 105 2 HOH HOH 353 A HOH 106 2 HOH HOH 354 A HOH 107 2 HOH HOH 355 A HOH 108 2 HOH HOH 356 A HOH 109 2 HOH HOH 357 A HOH 110 2 HOH HOH 358 A HOH 111 2 HOH HOH 359 A HOH 112 2 HOH HOH 360 A HOH 113 2 HOH HOH 361 A HOH 114 2 HOH HOH 362 A HOH 115 2 HOH HOH 363 A HOH 116 2 HOH HOH 364 A HOH 117 2 HOH HOH 365 A HOH 118 2 HOH HOH 366 A HOH 119 2 HOH HOH 367 A HOH 120 2 HOH HOH 368 A HOH 121 2 HOH HOH 369 A HOH 122 2 HOH HOH 370 A HOH 123 2 HOH HOH 371 A n 1 13 A n 2 14 A n 3 15 A n 4 16 A n 5 17 A n 6 18 A n 7 19 A n 8 20 A n 9 21 A n 10 22 A n 11 23 A n 12 24 A n 13 25 A n 14 26 A n 15 27 A n 16 28 A n 17 29 A n 18 30 A n 19 31 A n 20 32 A n 21 33 A n 22 34 A n 23 35 A GLU 36 n 24 GLU 36 A THR 37 n 25 THR 37 A ILE 38 n 26 ILE 38 A THR 39 n 27 THR 39 A VAL 40 n 28 VAL 40 A SER 41 n 29 SER 41 A THR 42 n 30 THR 42 A PRO 43 n 31 PRO 43 A ILE 44 n 32 ILE 44 A LYS 45 n 33 LYS 45 A GLN 46 n 34 GLN 46 A ILE 47 n 35 ILE 47 A PHE 48 n 36 PHE 48 A PRO 49 n 37 PRO 49 A ASP 50 n 38 ASP 50 A ALA 51 n 39 ALA 51 A ALA 52 n 40 ALA 52 A PHE 53 n 41 PHE 53 A ALA 54 n 42 ALA 54 A GLU 55 n 43 GLU 55 A THR 56 n 44 THR 56 A ILE 57 n 45 ILE 57 A LYS 58 n 46 LYS 58 A ALA 59 n 47 ALA 59 A ASN 60 n 48 ASN 60 A LEU 61 n 49 LEU 61 A LYS 62 n 50 LYS 62 A LYS 63 n 51 LYS 63 A LYS 64 n 52 LYS 64 A SER 65 n 53 SER 65 A VAL 66 n 54 VAL 66 A THR 67 n 55 THR 67 A ASP 68 n 56 ASP 68 A ALA 69 n 57 ALA 69 A VAL 70 n 58 VAL 70 A THR 71 n 59 THR 71 A GLN 72 n 60 GLN 72 A ASN 73 n 61 ASN 73 A GLU 74 n 62 GLU 74 A LEU 75 n 63 LEU 75 A ASN 76 n 64 ASN 76 A SER 77 n 65 SER 77 A ILE 78 n 66 ILE 78 A ASP 79 n 67 ASP 79 A GLN 80 n 68 GLN 80 A ILE 81 n 69 ILE 81 A ILE 82 n 70 ILE 82 A ALA 83 n 71 ALA 83 A ASN 84 n 72 ASN 84 A ASN 85 n 73 ASN 85 A SER 86 n 74 SER 86 A ASP 87 n 75 ASP 87 A ILE 88 n 76 ILE 88 A LYS 89 n 77 LYS 89 A SER 90 n 78 SER 90 A VAL 91 n 79 VAL 91 A GLN 92 n 80 GLN 92 A GLY 93 n 81 GLY 93 A ILE 94 n 82 ILE 94 A GLN 95 n 83 GLN 95 A TYR 96 n 84 TYR 96 A LEU 97 n 85 LEU 97 A PRO 98 n 86 PRO 98 A ASN 99 n 87 ASN 99 A VAL 100 n 88 VAL 100 A THR 101 n 89 THR 101 A LYS 102 n 90 LYS 102 A LEU 103 n 91 LEU 103 A PHE 104 n 92 PHE 104 A LEU 105 n 93 LEU 105 A ASN 106 n 94 ASN 106 A GLY 107 n 95 GLY 107 A ASN 108 n 96 ASN 108 A LYS 109 n 97 LYS 109 A LEU 110 n 98 LEU 110 A THR 111 n 99 THR 111 A ASP 112 n 100 ASP 112 A ILE 113 n 101 ILE 113 A LYS 114 n 102 LYS 114 A PRO 115 n 103 PRO 115 A LEU 116 n 104 LEU 116 A THR 117 n 105 THR 117 A ASN 118 n 106 ASN 118 A LEU 119 n 107 LEU 119 A LYS 120 n 108 LYS 120 A ASN 121 n 109 ASN 121 A LEU 122 n 110 LEU 122 A GLY 123 n 111 GLY 123 A TRP 124 n 112 TRP 124 A LEU 125 n 113 LEU 125 A PHE 126 n 114 PHE 126 A LEU 127 n 115 LEU 127 A ASP 128 n 116 ASP 128 A GLU 129 n 117 GLU 129 A ASN 130 n 118 ASN 130 A LYS 131 n 119 LYS 131 A ILE 132 n 120 ILE 132 A LYS 133 n 121 LYS 133 A ASP 134 n 122 ASP 134 A LEU 135 n 123 LEU 135 A SER 136 n 124 SER 136 A SER 137 n 125 SER 137 A LEU 138 n 126 LEU 138 A LYS 139 n 127 LYS 139 A ASP 140 n 128 ASP 140 A LEU 141 n 129 LEU 141 A LYS 142 n 130 LYS 142 A LYS 143 n 131 LYS 143 A LEU 144 n 132 LEU 144 A LYS 145 n 133 LYS 145 A SER 146 n 134 SER 146 A LEU 147 n 135 LEU 147 A SER 148 n 136 SER 148 A LEU 149 n 137 LEU 149 A GLU 150 n 138 GLU 150 A HIS 151 n 139 HIS 151 A ASN 152 n 140 ASN 152 A GLY 153 n 141 GLY 153 A ILE 154 n 142 ILE 154 A SER 155 n 143 SER 155 A ASP 156 n 144 ASP 156 A ILE 157 n 145 ILE 157 A ASN 158 n 146 ASN 158 A GLY 159 n 147 GLY 159 A LEU 160 n 148 LEU 160 A VAL 161 n 149 VAL 161 A HIS 162 n 150 HIS 162 A LEU 163 n 151 LEU 163 A PRO 164 n 152 PRO 164 A GLN 165 n 153 GLN 165 A LEU 166 n 154 LEU 166 A GLU 167 n 155 GLU 167 A SER 168 n 156 SER 168 A LEU 169 n 157 LEU 169 A TYR 170 n 158 TYR 170 A LEU 171 n 159 LEU 171 A GLY 172 n 160 GLY 172 A ASN 173 n 161 ASN 173 A ASN 174 n 162 ASN 174 A LYS 175 n 163 LYS 175 A ILE 176 n 164 ILE 176 A THR 177 n 165 THR 177 A ASP 178 n 166 ASP 178 A ILE 179 n 167 ILE 179 A THR 180 n 168 THR 180 A VAL 181 n 169 VAL 181 A LEU 182 n 170 LEU 182 A SER 183 n 171 SER 183 A ARG 184 n 172 ARG 184 A LEU 185 n 173 LEU 185 A THR 186 n 174 THR 186 A LYS 187 n 175 LYS 187 A LEU 188 n 176 LEU 188 A ASP 189 n 177 ASP 189 A THR 190 n 178 THR 190 A LEU 191 n 179 LEU 191 A SER 192 n 180 SER 192 A LEU 193 n 181 LEU 193 A GLU 194 n 182 GLU 194 A ASP 195 n 183 ASP 195 A ASN 196 n 184 ASN 196 A GLN 197 n 185 GLN 197 A ILE 198 n 186 ILE 198 A SER 199 n 187 SER 199 A ASP 200 n 188 ASP 200 A ILE 201 n 189 ILE 201 A VAL 202 n 190 VAL 202 A PRO 203 n 191 PRO 203 A LEU 204 n 192 LEU 204 A ALA 205 n 193 ALA 205 A GLY 206 n 194 GLY 206 A LEU 207 n 195 LEU 207 A THR 208 n 196 THR 208 A LYS 209 n 197 LYS 209 A LEU 210 n 198 LEU 210 A GLN 211 n 199 GLN 211 A ASN 212 n 200 ASN 212 A LEU 213 n 201 LEU 213 A TYR 214 n 202 TYR 214 A LEU 215 n 203 LEU 215 A SER 216 n 204 SER 216 A LYS 217 n 205 LYS 217 A ASN 218 n 206 ASN 218 A HIS 219 n 207 HIS 219 A ILE 220 n 208 ILE 220 A SER 221 n 209 SER 221 A ASP 222 n 210 ASP 222 A LEU 223 n 211 LEU 223 A ARG 224 n 212 ARG 224 A ALA 225 n 213 ALA 225 A LEU 226 n 214 LEU 226 A ALA 227 n 215 ALA 227 A GLY 228 n 216 GLY 228 A LEU 229 n 217 LEU 229 A LYS 230 n 218 LYS 230 A ASN 231 n 219 ASN 231 A LEU 232 n 220 LEU 232 A ASP 233 n 221 ASP 233 A VAL 234 n 222 VAL 234 A LEU 235 n 223 LEU 235 A GLU 236 n 224 GLU 236 A LEU 237 n 225 LEU 237 A PHE 238 n 226 PHE 238 A SER 239 n 227 SER 239 A GLN 240 n 228 GLN 240 A GLU 241 n 229 GLU 241 A CYS 242 n 230 CYS 242 A n 231 243 A n 232 244 A n 233 245 A n 234 246 A n 235 247 A n 236 248 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N THR 42 A N THR 30 A O VAL 70 A O VAL 58 A N ILE 81 A N ILE 69 A O PHE 104 A O PHE 92 A N LEU 103 A N LEU 91 A O PHE 126 A O PHE 114 A N LEU 125 A N LEU 113 A O SER 146 A O SER 134 A N LEU 147 A N LEU 135 A O TYR 170 A O TYR 158 A N LEU 169 A N LEU 157 A O SER 192 A O SER 180 A N LEU 191 A N LEU 179 A O ASN 212 A O ASN 200 A N LEU 213 A N LEU 201 A O VAL 234 A O VAL 222 1 A CE LYS 62 A CE LYS 50 0 Y 1 A NZ LYS 62 A NZ LYS 50 0 Y 1 A CD LYS 64 A CD LYS 52 0 Y 1 A CE LYS 64 A CE LYS 52 0 Y 1 A NZ LYS 64 A NZ LYS 52 0 Y 1 A CE LYS 120 A CE LYS 108 0 Y 1 A NZ LYS 120 A NZ LYS 108 0 Y 1 A CE LYS 217 A CE LYS 205 0 Y 1 A NZ LYS 217 A NZ LYS 205 0 Y 1 A CD GLU 241 A CD GLU 229 0 Y 1 A OE1 GLU 241 A OE1 GLU 229 0 Y 1 A OE2 GLU 241 A OE2 GLU 229 0 Y 1 A MET 13 A MET 1 1 Y 1 A GLY 14 A GLY 2 1 Y 1 A SER 15 A SER 3 1 Y 1 A SER 16 A SER 4 1 Y 1 A HIS 17 A HIS 5 1 Y 1 A HIS 18 A HIS 6 1 Y 1 A HIS 19 A HIS 7 1 Y 1 A HIS 20 A HIS 8 1 Y 1 A HIS 21 A HIS 9 1 Y 1 A HIS 22 A HIS 10 1 Y 1 A SER 23 A SER 11 1 Y 1 A SER 24 A SER 12 1 Y 1 A GLY 25 A GLY 13 1 Y 1 A LEU 26 A LEU 14 1 Y 1 A VAL 27 A VAL 15 1 Y 1 A PRO 28 A PRO 16 1 Y 1 A ARG 29 A ARG 17 1 Y 1 A GLY 30 A GLY 18 1 Y 1 A SER 31 A SER 19 1 Y 1 A HIS 32 A HIS 20 1 Y 1 A MET 33 A MET 21 1 Y 1 A ALA 34 A ALA 22 1 Y 1 A SER 35 A SER 23 1 Y 1 A LEU 243 A LEU 231 1 Y 1 A ASN 244 A ASN 232 1 Y 1 A LYS 245 A LYS 233 1 Y 1 A PRO 246 A PRO 234 1 Y 1 A ILE 247 A ILE 235 1 Y 1 A ASN 248 A ASN 236 1 Y 1 A ALA 83 -140.91 52.75 1 A LEU 97 -118.28 75.81 1 A ASN 108 -123.38 -158.67 1 A THR 111 -136.24 -35.20 1 A ASN 174 -135.63 -157.18 1 A ASP 195 60.64 61.38 1 A ASN 196 -138.63 -149.08 0.2401 0.201 0.206 0.206 1.93 15 1631 17134 16483 RANDOM 1 THROUGHOUT 0 MOLECULAR REPLACEMENT PDB ENTRY 1d0b Engh & Huber 1.93 15 123 1739 0 0 1616 .004235 1.18043 1.93 15.0 1OTM 17061 16502 0 0 0.051 1 18.0 2.93 96.7 1.93 2.00 1.56 0.55 95.5 data collection MAR345 data scaling SCALEPACK refinement CNS phasing CNS Calcium-binding mutant of the internalin B LRR domain 1 N N 2 N N A ILE 44 A ILE 32 HELX_P A PHE 48 A PHE 36 1 1 5 A ASP 50 A ASP 38 HELX_P A LEU 61 A LEU 49 1 2 12 A THR 71 A THR 59 HELX_P A SER 77 A SER 65 1 3 7 A GLY 93 A GLY 81 HELX_P A LEU 97 A LEU 85 5 4 5 A ILE 113 A ILE 101 HELX_P A THR 117 A THR 105 5 5 5 A LEU 135 A LEU 123 HELX_P A LYS 139 A LYS 127 5 6 5 A ILE 157 A ILE 145 HELX_P A LEU 163 A LEU 151 5 7 7 A ILE 179 A ILE 167 HELX_P A LEU 185 A LEU 173 5 8 7 A ILE 201 A ILE 189 HELX_P A ALA 205 A ALA 193 5 9 5 A LEU 223 A LEU 211 HELX_P A ALA 227 A ALA 215 5 10 5 CELL ADHESION internalin, InlB, calcium-binding, invasion, Listeria, CELL ADHESION INLB_LISMO UNP 1 36 P25147 ETITVPTPIKQIFSDDAFAETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKP LANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLED NQISDIVPLAGLTKLQNLYLSKNHISDLRALAGLKNLDVLELFSQECLNKPIN 36 248 1OTM 36 248 P25147 A 1 24 236 1 expression tag MET 13 1OTM A P25147 UNP 1 1 expression tag GLY 14 1OTM A P25147 UNP 2 1 expression tag SER 15 1OTM A P25147 UNP 3 1 expression tag SER 16 1OTM A P25147 UNP 4 1 expression tag HIS 17 1OTM A P25147 UNP 5 1 expression tag HIS 18 1OTM A P25147 UNP 6 1 expression tag HIS 19 1OTM A P25147 UNP 7 1 expression tag HIS 20 1OTM A P25147 UNP 8 1 expression tag HIS 21 1OTM A P25147 UNP 9 1 expression tag HIS 22 1OTM A P25147 UNP 10 1 expression tag SER 23 1OTM A P25147 UNP 11 1 expression tag SER 24 1OTM A P25147 UNP 12 1 expression tag GLY 25 1OTM A P25147 UNP 13 1 expression tag LEU 26 1OTM A P25147 UNP 14 1 expression tag VAL 27 1OTM A P25147 UNP 15 1 expression tag PRO 28 1OTM A P25147 UNP 16 1 expression tag ARG 29 1OTM A P25147 UNP 17 1 expression tag GLY 30 1OTM A P25147 UNP 18 1 expression tag SER 31 1OTM A P25147 UNP 19 1 expression tag HIS 32 1OTM A P25147 UNP 20 1 expression tag MET 33 1OTM A P25147 UNP 21 1 expression tag ALA 34 1OTM A P25147 UNP 22 1 expression tag SER 35 1OTM A P25147 UNP 23 1 PRO variant SER 41 1OTM A P25147 UNP 41 29 1 SER variant PRO 49 1OTM A P25147 UNP 49 37 1 ASP engineered mutation ALA 51 1OTM A P25147 UNP 51 39 1 ASP engineered mutation ALA 59 1OTM A P25147 UNP 59 47 1 ALA variant THR 117 1OTM A P25147 UNP 117 105 1 VAL variant ILE 132 1OTM A P25147 UNP 132 120 2 8 anti-parallel parallel parallel parallel parallel parallel parallel parallel A THR 42 A THR 30 A PRO 43 A PRO 31 A ALA 69 A ALA 57 A VAL 70 A VAL 58 A GLN 80 A GLN 68 A ILE 82 A ILE 70 A LYS 102 A LYS 90 A PHE 104 A PHE 92 A TRP 124 A TRP 112 A PHE 126 A PHE 114 A SER 146 A SER 134 A SER 148 A SER 136 A SER 168 A SER 156 A TYR 170 A TYR 158 A THR 190 A THR 178 A SER 192 A SER 180 A ASN 212 A ASN 200 A TYR 214 A TYR 202 A VAL 234 A VAL 222 A GLU 236 A GLU 224 19 P 21 21 21