0.011143
0.000000
0.000000
0.000000
0.011143
0.000000
0.000000
0.000000
0.007473
0.000000
0.000000
0.000000
Komori, H.
Adachi, S.
Miki, K.
Eker, A.
Kort, R.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
89.742
89.742
133.819
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C27 H33 N9 O15 P2
785.550
FLAVIN-ADENINE DINUCLEOTIDE
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
O4 P -3
94.971
PHOSPHATE ION
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
R
P
N
89
N
O
N
90
N
O
N
91
N
O
N
92
N
C
N
93
R
C
N
94
N
O
N
95
S
C
N
96
N
O
N
97
R
C
N
98
N
O
N
99
R
C
Y
100
N
N
Y
101
N
C
Y
102
N
N
Y
103
N
C
Y
104
N
C
N
105
N
N
Y
106
N
N
Y
107
N
C
Y
108
N
N
Y
109
N
C
N
110
N
N
N
111
N
C
N
112
N
O
N
113
N
N
N
114
N
C
N
115
N
O
N
116
N
C
N
117
N
N
Y
118
N
C
Y
119
N
C
Y
120
N
C
N
121
N
C
Y
122
N
C
N
123
N
C
Y
124
N
C
Y
125
N
C
N
126
N
N
N
127
N
C
N
128
N
C
N
129
S
C
N
130
N
O
N
131
S
C
N
132
N
O
N
133
R
C
N
134
N
O
N
135
N
C
N
136
N
O
N
137
R
P
N
138
N
O
N
139
N
O
N
140
N
O
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
N
N
175
S
C
N
176
N
C
N
177
N
O
N
178
N
C
N
179
N
C
N
180
N
C
N
181
N
O
N
182
N
N
N
183
N
O
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
N
N
195
S
C
N
196
N
C
N
197
N
O
N
198
N
C
N
199
N
C
N
200
N
C
N
201
N
O
N
202
N
O
N
203
N
O
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
N
N
214
N
C
N
215
N
C
N
216
N
O
N
217
N
O
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
N
N
224
S
C
N
225
N
C
N
226
N
O
N
227
N
C
Y
228
N
C
Y
229
N
N
Y
230
N
C
Y
231
N
C
Y
232
N
N
N
233
N
O
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
O
N
245
N
H
N
246
N
H
N
247
N
N
N
248
S
C
N
249
N
C
N
250
N
O
N
251
S
C
N
252
N
C
N
253
N
C
N
254
N
C
N
255
N
O
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
N
N
270
S
C
N
271
N
C
N
272
N
O
N
273
N
C
N
274
N
C
N
275
N
C
N
276
N
C
N
277
N
O
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
N
N
292
S
C
N
293
N
C
N
294
N
O
N
295
N
C
N
296
N
C
N
297
N
C
N
298
N
C
N
299
N
N
N
300
N
O
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
N
N
317
S
C
N
318
N
C
N
319
N
O
N
320
N
C
N
321
N
C
N
322
N
S
N
323
N
C
N
324
N
O
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
N
N
337
S
C
N
338
N
C
N
339
N
O
N
340
N
C
Y
341
N
C
Y
342
N
C
Y
343
N
C
Y
344
N
C
Y
345
N
C
Y
346
N
C
N
347
N
O
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
P
N
360
N
O
N
361
N
O
N
362
N
O
N
363
N
O
N
364
N
N
N
365
S
C
N
366
N
C
N
367
N
O
N
368
N
C
N
369
N
C
N
370
N
C
N
371
N
O
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
N
N
382
S
C
N
383
N
C
N
384
N
O
N
385
N
C
N
386
N
O
N
387
N
O
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
N
N
396
S
C
N
397
N
C
N
398
N
O
N
399
R
C
N
400
N
O
N
401
N
C
N
402
N
O
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
N
N
413
S
C
N
414
N
C
N
415
N
O
N
416
N
C
Y
417
N
C
Y
418
N
C
Y
419
N
C
Y
420
N
N
Y
421
N
C
Y
422
N
C
Y
423
N
C
Y
424
N
C
Y
425
N
C
N
426
N
O
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
N
N
440
S
C
N
441
N
C
N
442
N
O
N
443
N
C
Y
444
N
C
Y
445
N
C
Y
446
N
C
Y
447
N
C
Y
448
N
C
Y
449
N
C
N
450
N
O
N
451
N
O
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
N
N
464
S
C
N
465
N
C
N
466
N
O
N
467
N
C
N
468
N
C
N
469
N
C
N
470
N
O
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
doub
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
Y
106
N
sing
Y
107
N
sing
Y
108
N
doub
N
109
N
sing
Y
110
N
sing
Y
111
N
sing
Y
112
N
doub
N
113
N
sing
Y
114
N
doub
N
115
N
sing
N
116
N
sing
Y
117
N
sing
Y
118
N
doub
N
119
N
sing
Y
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
doub
N
128
N
sing
N
129
N
doub
N
130
N
sing
N
131
N
sing
Y
132
N
doub
Y
133
N
sing
Y
134
N
sing
N
135
N
sing
N
136
N
sing
Y
137
N
doub
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
Y
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
Y
146
N
doub
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
doub
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
doub
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
doub
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
doub
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
doub
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
doub
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
doub
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
Y
231
N
sing
Y
232
N
doub
Y
233
N
doub
N
234
N
sing
Y
235
N
sing
N
236
N
sing
Y
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
doub
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
doub
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
doub
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
doub
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
Y
339
N
doub
Y
340
N
sing
Y
341
N
sing
N
342
N
sing
Y
343
N
doub
N
344
N
sing
Y
345
N
doub
N
346
N
sing
Y
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
doub
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
doub
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
doub
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
doub
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
doub
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
Y
412
N
doub
Y
413
N
sing
Y
414
N
sing
N
415
N
sing
Y
416
N
doub
Y
417
N
sing
Y
418
N
sing
N
419
N
sing
Y
420
N
sing
Y
421
N
doub
N
422
N
sing
Y
423
N
doub
N
424
N
sing
Y
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
doub
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
Y
440
N
doub
Y
441
N
sing
Y
442
N
sing
N
443
N
sing
Y
444
N
doub
N
445
N
sing
Y
446
N
doub
N
447
N
sing
Y
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
doub
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
sing
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
60
1205
1213
10.1107/S0907444904009321
15213381
DNA apophotolyase from Anacystis nidulans: 1.8 A structure, 8-HDF reconstitution and X-ray-induced FAD reduction.
2004
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
54
905
921
10.1107/S0907444998003254
9757107
Crystallography & NMR System
1998
10.2210/pdb1owo/pdb
pdb_00001owo
100
1
CCD
2001-10-03
MARRESEARCH
fix-exit double crystal monochromator
SINGLE WAVELENGTH
M
x-ray
1
1
1.0
BL44B2
SPring-8
1
SYNCHROTRON
SPRING-8 BEAMLINE BL44B2
54531.504
Deoxyribodipyrimidine photolyase
4.1.99.3
1
man
polymer
94.971
PHOSPHATE ION
1
syn
non-polymer
785.550
FLAVIN-ADENINE DINUCLEOTIDE
1
syn
non-polymer
18.015
water
228
nat
water
Photolyase
no
no
MAAPILFWHRRDLRLSDNIGLAAARAQSAQLIGLFCLDPQILQSADMAPARVAYLQGCLQELQQRYQQAGSRLLLLQGDP
QHLIPQLAQQLQAEAVYWNQDIEPYGRDRDGQVAAALKTAGIRAVQLWDQLLHSPDQILSGSGNPYSVYGPFWKNWQAQP
KPTPVATPTELVDLSPEQLTAIAPLLLSELPTLKQLGFDWDGGFPVEPGETAAIARLQEFCDRAIADYDPQRNFPAEAGT
SGLSPALKFGAIGIRQAWQAASAAHALSRSDEARNSIRVWQQELAWREFYQHALYHFPSLADGPYRSLWQQFPWENREAL
FTAWTQAQTGYPIVDAAMRQLTETGWMHNRCRMIVASFLTKDLIIDWRRGEQFFMQHLVDGDLAANNGGWQWSASSGMDP
KPLRIFNPASQAKKFDATATYIKRWLPELRHVHPKDLISGEITPIERRGYPAPIVNHNLRQKQFKALYNQLKAAIAEPEA
EPDS
MAAPILFWHRRDLRLSDNIGLAAARAQSAQLIGLFCLDPQILQSADMAPARVAYLQGCLQELQQRYQQAGSRLLLLQGDP
QHLIPQLAQQLQAEAVYWNQDIEPYGRDRDGQVAAALKTAGIRAVQLWDQLLHSPDQILSGSGNPYSVYGPFWKNWQAQP
KPTPVATPTELVDLSPEQLTAIAPLLLSELPTLKQLGFDWDGGFPVEPGETAAIARLQEFCDRAIADYDPQRNFPAEAGT
SGLSPALKFGAIGIRQAWQAASAAHALSRSDEARNSIRVWQQELAWREFYQHALYHFPSLADGPYRSLWQQFPWENREAL
FTAWTQAQTGYPIVDAAMRQLTETGWMHNRCRMIVASFLTKDLIIDWRRGEQFFMQHLVDGDLAANNGGWQWSASSGMDP
KPLRIFNPASQAKKFDATATYIKRWLPELRHVHPKDLISGEITPIERRGYPAPIVNHNLRQKQFKALYNQLKAAIAEPEA
EPDS
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Synechococcus
Synechococcus elongatus
PCC 6301
Escherichia
sample
269084
Synechococcus elongatus
562
Escherichia coli
plasmid
pET3a
1
2.37
47.61
VAPOR DIFFUSION, HANGING DROP
7
Ammonium Sulfate, pH 7, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
chem_comp_atom
chem_comp_bond
database_2
struct_site
repository
Initial release
Version format compliance
Source and taxonomy
Version format compliance
Data collection
Database references
Derived calculations
1
0
2004-04-13
1
1
2008-04-29
1
2
2011-07-13
1
3
2024-03-13
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
The same protein without a light-harvesting cofactor (8-HDF).
Structure of apophotolyase from Anacystis nidulans.
The same protein without 2-mercaptoethanol (DATA1).
The same protein without 2-mercaptoethanol (DATA3).
The same protein with 2-mercaptoethanol (DATA6).
RCSB
Y
PDBJ
2003-03-28
REL
REL
PO4
PHOSPHATE ION
FAD
FLAVIN-ADENINE DINUCLEOTIDE
HOH
water
PO4
486
2
PO4
PO4
486
A
FAD
485
3
FAD
FAD
485
A
HOH
1
4
HOH
HOH
487
A
HOH
2
4
HOH
HOH
488
A
HOH
3
4
HOH
HOH
489
A
HOH
4
4
HOH
HOH
490
A
HOH
5
4
HOH
HOH
491
A
HOH
6
4
HOH
HOH
492
A
HOH
7
4
HOH
HOH
493
A
HOH
8
4
HOH
HOH
494
A
HOH
9
4
HOH
HOH
495
A
HOH
10
4
HOH
HOH
496
A
HOH
11
4
HOH
HOH
497
A
HOH
12
4
HOH
HOH
498
A
HOH
13
4
HOH
HOH
499
A
HOH
14
4
HOH
HOH
500
A
HOH
15
4
HOH
HOH
501
A
HOH
16
4
HOH
HOH
502
A
HOH
17
4
HOH
HOH
503
A
HOH
18
4
HOH
HOH
504
A
HOH
19
4
HOH
HOH
505
A
HOH
20
4
HOH
HOH
506
A
HOH
21
4
HOH
HOH
507
A
HOH
22
4
HOH
HOH
508
A
HOH
23
4
HOH
HOH
509
A
HOH
24
4
HOH
HOH
510
A
HOH
25
4
HOH
HOH
511
A
HOH
26
4
HOH
HOH
512
A
HOH
27
4
HOH
HOH
513
A
HOH
28
4
HOH
HOH
514
A
HOH
29
4
HOH
HOH
515
A
HOH
30
4
HOH
HOH
516
A
HOH
31
4
HOH
HOH
517
A
HOH
32
4
HOH
HOH
518
A
HOH
33
4
HOH
HOH
519
A
HOH
34
4
HOH
HOH
520
A
HOH
35
4
HOH
HOH
521
A
HOH
36
4
HOH
HOH
522
A
HOH
37
4
HOH
HOH
523
A
HOH
38
4
HOH
HOH
524
A
HOH
39
4
HOH
HOH
525
A
HOH
40
4
HOH
HOH
526
A
HOH
41
4
HOH
HOH
527
A
HOH
42
4
HOH
HOH
528
A
HOH
43
4
HOH
HOH
529
A
HOH
44
4
HOH
HOH
530
A
HOH
45
4
HOH
HOH
531
A
HOH
46
4
HOH
HOH
532
A
HOH
47
4
HOH
HOH
533
A
HOH
48
4
HOH
HOH
534
A
HOH
49
4
HOH
HOH
535
A
HOH
50
4
HOH
HOH
536
A
HOH
51
4
HOH
HOH
537
A
HOH
52
4
HOH
HOH
538
A
HOH
53
4
HOH
HOH
539
A
HOH
54
4
HOH
HOH
540
A
HOH
55
4
HOH
HOH
541
A
HOH
56
4
HOH
HOH
542
A
HOH
57
4
HOH
HOH
543
A
HOH
58
4
HOH
HOH
544
A
HOH
59
4
HOH
HOH
545
A
HOH
60
4
HOH
HOH
546
A
HOH
61
4
HOH
HOH
547
A
HOH
62
4
HOH
HOH
548
A
HOH
63
4
HOH
HOH
549
A
HOH
64
4
HOH
HOH
550
A
HOH
65
4
HOH
HOH
551
A
HOH
66
4
HOH
HOH
552
A
HOH
67
4
HOH
HOH
553
A
HOH
68
4
HOH
HOH
554
A
HOH
69
4
HOH
HOH
555
A
HOH
70
4
HOH
HOH
556
A
HOH
71
4
HOH
HOH
557
A
HOH
72
4
HOH
HOH
558
A
HOH
73
4
HOH
HOH
559
A
HOH
74
4
HOH
HOH
560
A
HOH
75
4
HOH
HOH
561
A
HOH
76
4
HOH
HOH
562
A
HOH
77
4
HOH
HOH
563
A
HOH
78
4
HOH
HOH
564
A
HOH
79
4
HOH
HOH
565
A
HOH
80
4
HOH
HOH
566
A
HOH
81
4
HOH
HOH
567
A
HOH
82
4
HOH
HOH
568
A
HOH
83
4
HOH
HOH
569
A
HOH
84
4
HOH
HOH
570
A
HOH
85
4
HOH
HOH
571
A
HOH
86
4
HOH
HOH
572
A
HOH
87
4
HOH
HOH
573
A
HOH
88
4
HOH
HOH
574
A
HOH
89
4
HOH
HOH
575
A
HOH
90
4
HOH
HOH
576
A
HOH
91
4
HOH
HOH
577
A
HOH
92
4
HOH
HOH
578
A
HOH
93
4
HOH
HOH
579
A
HOH
94
4
HOH
HOH
580
A
HOH
95
4
HOH
HOH
581
A
HOH
96
4
HOH
HOH
582
A
HOH
97
4
HOH
HOH
583
A
HOH
98
4
HOH
HOH
584
A
HOH
99
4
HOH
HOH
585
A
HOH
100
4
HOH
HOH
586
A
HOH
101
4
HOH
HOH
587
A
HOH
102
4
HOH
HOH
588
A
HOH
103
4
HOH
HOH
589
A
HOH
104
4
HOH
HOH
590
A
HOH
105
4
HOH
HOH
591
A
HOH
106
4
HOH
HOH
592
A
HOH
107
4
HOH
HOH
593
A
HOH
108
4
HOH
HOH
594
A
HOH
109
4
HOH
HOH
595
A
HOH
110
4
HOH
HOH
596
A
HOH
111
4
HOH
HOH
597
A
HOH
112
4
HOH
HOH
598
A
HOH
113
4
HOH
HOH
599
A
HOH
114
4
HOH
HOH
600
A
HOH
115
4
HOH
HOH
601
A
HOH
116
4
HOH
HOH
602
A
HOH
117
4
HOH
HOH
603
A
HOH
118
4
HOH
HOH
604
A
HOH
119
4
HOH
HOH
605
A
HOH
120
4
HOH
HOH
606
A
HOH
121
4
HOH
HOH
607
A
HOH
122
4
HOH
HOH
608
A
HOH
123
4
HOH
HOH
609
A
HOH
124
4
HOH
HOH
610
A
HOH
125
4
HOH
HOH
611
A
HOH
126
4
HOH
HOH
612
A
HOH
127
4
HOH
HOH
613
A
HOH
128
4
HOH
HOH
614
A
HOH
129
4
HOH
HOH
615
A
HOH
130
4
HOH
HOH
616
A
HOH
131
4
HOH
HOH
617
A
HOH
132
4
HOH
HOH
618
A
HOH
133
4
HOH
HOH
619
A
HOH
134
4
HOH
HOH
620
A
HOH
135
4
HOH
HOH
621
A
HOH
136
4
HOH
HOH
622
A
HOH
137
4
HOH
HOH
623
A
HOH
138
4
HOH
HOH
624
A
HOH
139
4
HOH
HOH
625
A
HOH
140
4
HOH
HOH
626
A
HOH
141
4
HOH
HOH
627
A
HOH
142
4
HOH
HOH
628
A
HOH
143
4
HOH
HOH
629
A
HOH
144
4
HOH
HOH
630
A
HOH
145
4
HOH
HOH
631
A
HOH
146
4
HOH
HOH
632
A
HOH
147
4
HOH
HOH
633
A
HOH
148
4
HOH
HOH
634
A
HOH
149
4
HOH
HOH
635
A
HOH
150
4
HOH
HOH
636
A
HOH
151
4
HOH
HOH
637
A
HOH
152
4
HOH
HOH
638
A
HOH
153
4
HOH
HOH
639
A
HOH
154
4
HOH
HOH
640
A
HOH
155
4
HOH
HOH
641
A
HOH
156
4
HOH
HOH
642
A
HOH
157
4
HOH
HOH
643
A
HOH
158
4
HOH
HOH
644
A
HOH
159
4
HOH
HOH
645
A
HOH
160
4
HOH
HOH
646
A
HOH
161
4
HOH
HOH
647
A
HOH
162
4
HOH
HOH
648
A
HOH
163
4
HOH
HOH
649
A
HOH
164
4
HOH
HOH
650
A
HOH
165
4
HOH
HOH
651
A
HOH
166
4
HOH
HOH
652
A
HOH
167
4
HOH
HOH
653
A
HOH
168
4
HOH
HOH
654
A
HOH
169
4
HOH
HOH
655
A
HOH
170
4
HOH
HOH
656
A
HOH
171
4
HOH
HOH
657
A
HOH
172
4
HOH
HOH
658
A
HOH
173
4
HOH
HOH
659
A
HOH
174
4
HOH
HOH
660
A
HOH
175
4
HOH
HOH
661
A
HOH
176
4
HOH
HOH
662
A
HOH
177
4
HOH
HOH
663
A
HOH
178
4
HOH
HOH
664
A
HOH
179
4
HOH
HOH
665
A
HOH
180
4
HOH
HOH
666
A
HOH
181
4
HOH
HOH
667
A
HOH
182
4
HOH
HOH
668
A
HOH
183
4
HOH
HOH
669
A
HOH
184
4
HOH
HOH
670
A
HOH
185
4
HOH
HOH
671
A
HOH
186
4
HOH
HOH
672
A
HOH
187
4
HOH
HOH
673
A
HOH
188
4
HOH
HOH
674
A
HOH
189
4
HOH
HOH
675
A
HOH
190
4
HOH
HOH
676
A
HOH
191
4
HOH
HOH
677
A
HOH
192
4
HOH
HOH
678
A
HOH
193
4
HOH
HOH
679
A
HOH
194
4
HOH
HOH
680
A
HOH
195
4
HOH
HOH
681
A
HOH
196
4
HOH
HOH
682
A
HOH
197
4
HOH
HOH
683
A
HOH
198
4
HOH
HOH
684
A
HOH
199
4
HOH
HOH
685
A
HOH
200
4
HOH
HOH
686
A
HOH
201
4
HOH
HOH
687
A
HOH
202
4
HOH
HOH
688
A
HOH
203
4
HOH
HOH
689
A
HOH
204
4
HOH
HOH
690
A
HOH
205
4
HOH
HOH
691
A
HOH
206
4
HOH
HOH
692
A
HOH
207
4
HOH
HOH
693
A
HOH
208
4
HOH
HOH
694
A
HOH
209
4
HOH
HOH
695
A
HOH
210
4
HOH
HOH
696
A
HOH
211
4
HOH
HOH
697
A
HOH
212
4
HOH
HOH
698
A
HOH
213
4
HOH
HOH
699
A
HOH
214
4
HOH
HOH
700
A
HOH
215
4
HOH
HOH
701
A
HOH
216
4
HOH
HOH
702
A
HOH
217
4
HOH
HOH
703
A
HOH
218
4
HOH
HOH
704
A
HOH
219
4
HOH
HOH
705
A
HOH
220
4
HOH
HOH
706
A
HOH
221
4
HOH
HOH
707
A
HOH
222
4
HOH
HOH
708
A
HOH
223
4
HOH
HOH
709
A
HOH
224
4
HOH
HOH
710
A
HOH
225
4
HOH
HOH
711
A
HOH
226
4
HOH
HOH
712
A
HOH
227
4
HOH
HOH
713
A
HOH
228
4
HOH
HOH
714
A
n
1
1
A
ALA
2
n
2
ALA
2
A
ALA
3
n
3
ALA
3
A
PRO
4
n
4
PRO
4
A
ILE
5
n
5
ILE
5
A
LEU
6
n
6
LEU
6
A
PHE
7
n
7
PHE
7
A
TRP
8
n
8
TRP
8
A
HIS
9
n
9
HIS
9
A
ARG
10
n
10
ARG
10
A
ARG
11
n
11
ARG
11
A
ASP
12
n
12
ASP
12
A
LEU
13
n
13
LEU
13
A
ARG
14
n
14
ARG
14
A
LEU
15
n
15
LEU
15
A
SER
16
n
16
SER
16
A
ASP
17
n
17
ASP
17
A
ASN
18
n
18
ASN
18
A
ILE
19
n
19
ILE
19
A
GLY
20
n
20
GLY
20
A
LEU
21
n
21
LEU
21
A
ALA
22
n
22
ALA
22
A
ALA
23
n
23
ALA
23
A
ALA
24
n
24
ALA
24
A
ARG
25
n
25
ARG
25
A
ALA
26
n
26
ALA
26
A
GLN
27
n
27
GLN
27
A
SER
28
n
28
SER
28
A
ALA
29
n
29
ALA
29
A
GLN
30
n
30
GLN
30
A
LEU
31
n
31
LEU
31
A
ILE
32
n
32
ILE
32
A
GLY
33
n
33
GLY
33
A
LEU
34
n
34
LEU
34
A
PHE
35
n
35
PHE
35
A
CYS
36
n
36
CYS
36
A
LEU
37
n
37
LEU
37
A
ASP
38
n
38
ASP
38
A
PRO
39
n
39
PRO
39
A
GLN
40
n
40
GLN
40
A
ILE
41
n
41
ILE
41
A
LEU
42
n
42
LEU
42
A
GLN
43
n
43
GLN
43
A
SER
44
n
44
SER
44
A
ALA
45
n
45
ALA
45
A
ASP
46
n
46
ASP
46
A
MET
47
n
47
MET
47
A
ALA
48
n
48
ALA
48
A
PRO
49
n
49
PRO
49
A
ALA
50
n
50
ALA
50
A
ARG
51
n
51
ARG
51
A
VAL
52
n
52
VAL
52
A
ALA
53
n
53
ALA
53
A
TYR
54
n
54
TYR
54
A
LEU
55
n
55
LEU
55
A
GLN
56
n
56
GLN
56
A
GLY
57
n
57
GLY
57
A
CYS
58
n
58
CYS
58
A
LEU
59
n
59
LEU
59
A
GLN
60
n
60
GLN
60
A
GLU
61
n
61
GLU
61
A
LEU
62
n
62
LEU
62
A
GLN
63
n
63
GLN
63
A
GLN
64
n
64
GLN
64
A
ARG
65
n
65
ARG
65
A
TYR
66
n
66
TYR
66
A
GLN
67
n
67
GLN
67
A
GLN
68
n
68
GLN
68
A
ALA
69
n
69
ALA
69
A
GLY
70
n
70
GLY
70
A
SER
71
n
71
SER
71
A
ARG
72
n
72
ARG
72
A
LEU
73
n
73
LEU
73
A
LEU
74
n
74
LEU
74
A
LEU
75
n
75
LEU
75
A
LEU
76
n
76
LEU
76
A
GLN
77
n
77
GLN
77
A
GLY
78
n
78
GLY
78
A
ASP
79
n
79
ASP
79
A
PRO
80
n
80
PRO
80
A
GLN
81
n
81
GLN
81
A
HIS
82
n
82
HIS
82
A
LEU
83
n
83
LEU
83
A
ILE
84
n
84
ILE
84
A
PRO
85
n
85
PRO
85
A
GLN
86
n
86
GLN
86
A
LEU
87
n
87
LEU
87
A
ALA
88
n
88
ALA
88
A
GLN
89
n
89
GLN
89
A
GLN
90
n
90
GLN
90
A
LEU
91
n
91
LEU
91
A
GLN
92
n
92
GLN
92
A
ALA
93
n
93
ALA
93
A
GLU
94
n
94
GLU
94
A
ALA
95
n
95
ALA
95
A
VAL
96
n
96
VAL
96
A
TYR
97
n
97
TYR
97
A
TRP
98
n
98
TRP
98
A
ASN
99
n
99
ASN
99
A
GLN
100
n
100
GLN
100
A
ASP
101
n
101
ASP
101
A
ILE
102
n
102
ILE
102
A
GLU
103
n
103
GLU
103
A
PRO
104
n
104
PRO
104
A
TYR
105
n
105
TYR
105
A
GLY
106
n
106
GLY
106
A
ARG
107
n
107
ARG
107
A
ASP
108
n
108
ASP
108
A
ARG
109
n
109
ARG
109
A
ASP
110
n
110
ASP
110
A
GLY
111
n
111
GLY
111
A
GLN
112
n
112
GLN
112
A
VAL
113
n
113
VAL
113
A
ALA
114
n
114
ALA
114
A
ALA
115
n
115
ALA
115
A
ALA
116
n
116
ALA
116
A
LEU
117
n
117
LEU
117
A
LYS
118
n
118
LYS
118
A
THR
119
n
119
THR
119
A
ALA
120
n
120
ALA
120
A
GLY
121
n
121
GLY
121
A
ILE
122
n
122
ILE
122
A
ARG
123
n
123
ARG
123
A
ALA
124
n
124
ALA
124
A
VAL
125
n
125
VAL
125
A
GLN
126
n
126
GLN
126
A
LEU
127
n
127
LEU
127
A
TRP
128
n
128
TRP
128
A
ASP
129
n
129
ASP
129
A
GLN
130
n
130
GLN
130
A
LEU
131
n
131
LEU
131
A
LEU
132
n
132
LEU
132
A
HIS
133
n
133
HIS
133
A
SER
134
n
134
SER
134
A
PRO
135
n
135
PRO
135
A
ASP
136
n
136
ASP
136
A
GLN
137
n
137
GLN
137
A
ILE
138
n
138
ILE
138
A
LEU
139
n
139
LEU
139
A
SER
140
n
140
SER
140
A
GLY
141
n
141
GLY
141
A
SER
142
n
142
SER
142
A
GLY
143
n
143
GLY
143
A
ASN
144
n
144
ASN
144
A
PRO
145
n
145
PRO
145
A
TYR
146
n
146
TYR
146
A
SER
147
n
147
SER
147
A
VAL
148
n
148
VAL
148
A
TYR
149
n
149
TYR
149
A
GLY
150
n
150
GLY
150
A
PRO
151
n
151
PRO
151
A
PHE
152
n
152
PHE
152
A
TRP
153
n
153
TRP
153
A
LYS
154
n
154
LYS
154
A
ASN
155
n
155
ASN
155
A
TRP
156
n
156
TRP
156
A
GLN
157
n
157
GLN
157
A
ALA
158
n
158
ALA
158
A
GLN
159
n
159
GLN
159
A
PRO
160
n
160
PRO
160
A
LYS
161
n
161
LYS
161
A
PRO
162
n
162
PRO
162
A
THR
163
n
163
THR
163
A
PRO
164
n
164
PRO
164
A
VAL
165
n
165
VAL
165
A
ALA
166
n
166
ALA
166
A
THR
167
n
167
THR
167
A
PRO
168
n
168
PRO
168
A
THR
169
n
169
THR
169
A
GLU
170
n
170
GLU
170
A
LEU
171
n
171
LEU
171
A
VAL
172
n
172
VAL
172
A
ASP
173
n
173
ASP
173
A
LEU
174
n
174
LEU
174
A
SER
175
n
175
SER
175
A
PRO
176
n
176
PRO
176
A
GLU
177
n
177
GLU
177
A
GLN
178
n
178
GLN
178
A
LEU
179
n
179
LEU
179
A
THR
180
n
180
THR
180
A
ALA
181
n
181
ALA
181
A
ILE
182
n
182
ILE
182
A
ALA
183
n
183
ALA
183
A
PRO
184
n
184
PRO
184
A
LEU
185
n
185
LEU
185
A
LEU
186
n
186
LEU
186
A
LEU
187
n
187
LEU
187
A
SER
188
n
188
SER
188
A
GLU
189
n
189
GLU
189
A
LEU
190
n
190
LEU
190
A
PRO
191
n
191
PRO
191
A
THR
192
n
192
THR
192
A
LEU
193
n
193
LEU
193
A
LYS
194
n
194
LYS
194
A
GLN
195
n
195
GLN
195
A
LEU
196
n
196
LEU
196
A
GLY
197
n
197
GLY
197
A
PHE
198
n
198
PHE
198
A
ASP
199
n
199
ASP
199
A
TRP
200
n
200
TRP
200
A
ASP
201
n
201
ASP
201
A
GLY
202
n
202
GLY
202
A
GLY
203
n
203
GLY
203
A
PHE
204
n
204
PHE
204
A
PRO
205
n
205
PRO
205
A
VAL
206
n
206
VAL
206
A
GLU
207
n
207
GLU
207
A
PRO
208
n
208
PRO
208
A
GLY
209
n
209
GLY
209
A
GLU
210
n
210
GLU
210
A
THR
211
n
211
THR
211
A
ALA
212
n
212
ALA
212
A
ALA
213
n
213
ALA
213
A
ILE
214
n
214
ILE
214
A
ALA
215
n
215
ALA
215
A
ARG
216
n
216
ARG
216
A
LEU
217
n
217
LEU
217
A
GLN
218
n
218
GLN
218
A
GLU
219
n
219
GLU
219
A
PHE
220
n
220
PHE
220
A
CYS
221
n
221
CYS
221
A
ASP
222
n
222
ASP
222
A
ARG
223
n
223
ARG
223
A
ALA
224
n
224
ALA
224
A
ILE
225
n
225
ILE
225
A
ALA
226
n
226
ALA
226
A
ASP
227
n
227
ASP
227
A
TYR
228
n
228
TYR
228
A
ASP
229
n
229
ASP
229
A
PRO
230
n
230
PRO
230
A
GLN
231
n
231
GLN
231
A
ARG
232
n
232
ARG
232
A
ASN
233
n
233
ASN
233
A
PHE
234
n
234
PHE
234
A
PRO
235
n
235
PRO
235
A
ALA
236
n
236
ALA
236
A
GLU
237
n
237
GLU
237
A
ALA
238
n
238
ALA
238
A
GLY
239
n
239
GLY
239
A
THR
240
n
240
THR
240
A
SER
241
n
241
SER
241
A
GLY
242
n
242
GLY
242
A
LEU
243
n
243
LEU
243
A
SER
244
n
244
SER
244
A
PRO
245
n
245
PRO
245
A
ALA
246
n
246
ALA
246
A
LEU
247
n
247
LEU
247
A
LYS
248
n
248
LYS
248
A
PHE
249
n
249
PHE
249
A
GLY
250
n
250
GLY
250
A
ALA
251
n
251
ALA
251
A
ILE
252
n
252
ILE
252
A
GLY
253
n
253
GLY
253
A
ILE
254
n
254
ILE
254
A
ARG
255
n
255
ARG
255
A
GLN
256
n
256
GLN
256
A
ALA
257
n
257
ALA
257
A
TRP
258
n
258
TRP
258
A
GLN
259
n
259
GLN
259
A
ALA
260
n
260
ALA
260
A
ALA
261
n
261
ALA
261
A
SER
262
n
262
SER
262
A
ALA
263
n
263
ALA
263
A
ALA
264
n
264
ALA
264
A
HIS
265
n
265
HIS
265
A
ALA
266
n
266
ALA
266
A
LEU
267
n
267
LEU
267
A
SER
268
n
268
SER
268
A
ARG
269
n
269
ARG
269
A
SER
270
n
270
SER
270
A
ASP
271
n
271
ASP
271
A
GLU
272
n
272
GLU
272
A
ALA
273
n
273
ALA
273
A
ARG
274
n
274
ARG
274
A
ASN
275
n
275
ASN
275
A
SER
276
n
276
SER
276
A
ILE
277
n
277
ILE
277
A
ARG
278
n
278
ARG
278
A
VAL
279
n
279
VAL
279
A
TRP
280
n
280
TRP
280
A
GLN
281
n
281
GLN
281
A
GLN
282
n
282
GLN
282
A
GLU
283
n
283
GLU
283
A
LEU
284
n
284
LEU
284
A
ALA
285
n
285
ALA
285
A
TRP
286
n
286
TRP
286
A
ARG
287
n
287
ARG
287
A
GLU
288
n
288
GLU
288
A
PHE
289
n
289
PHE
289
A
TYR
290
n
290
TYR
290
A
GLN
291
n
291
GLN
291
A
HIS
292
n
292
HIS
292
A
ALA
293
n
293
ALA
293
A
LEU
294
n
294
LEU
294
A
TYR
295
n
295
TYR
295
A
HIS
296
n
296
HIS
296
A
PHE
297
n
297
PHE
297
A
PRO
298
n
298
PRO
298
A
SER
299
n
299
SER
299
A
LEU
300
n
300
LEU
300
A
ALA
301
n
301
ALA
301
A
ASP
302
n
302
ASP
302
A
GLY
303
n
303
GLY
303
A
PRO
304
n
304
PRO
304
A
TYR
305
n
305
TYR
305
A
ARG
306
n
306
ARG
306
A
SER
307
n
307
SER
307
A
LEU
308
n
308
LEU
308
A
TRP
309
n
309
TRP
309
A
GLN
310
n
310
GLN
310
A
GLN
311
n
311
GLN
311
A
PHE
312
n
312
PHE
312
A
PRO
313
n
313
PRO
313
A
TRP
314
n
314
TRP
314
A
GLU
315
n
315
GLU
315
A
ASN
316
n
316
ASN
316
A
ARG
317
n
317
ARG
317
A
GLU
318
n
318
GLU
318
A
ALA
319
n
319
ALA
319
A
LEU
320
n
320
LEU
320
A
PHE
321
n
321
PHE
321
A
THR
322
n
322
THR
322
A
ALA
323
n
323
ALA
323
A
TRP
324
n
324
TRP
324
A
THR
325
n
325
THR
325
A
GLN
326
n
326
GLN
326
A
ALA
327
n
327
ALA
327
A
GLN
328
n
328
GLN
328
A
THR
329
n
329
THR
329
A
GLY
330
n
330
GLY
330
A
TYR
331
n
331
TYR
331
A
PRO
332
n
332
PRO
332
A
ILE
333
n
333
ILE
333
A
VAL
334
n
334
VAL
334
A
ASP
335
n
335
ASP
335
A
ALA
336
n
336
ALA
336
A
ALA
337
n
337
ALA
337
A
MET
338
n
338
MET
338
A
ARG
339
n
339
ARG
339
A
GLN
340
n
340
GLN
340
A
LEU
341
n
341
LEU
341
A
THR
342
n
342
THR
342
A
GLU
343
n
343
GLU
343
A
THR
344
n
344
THR
344
A
GLY
345
n
345
GLY
345
A
TRP
346
n
346
TRP
346
A
MET
347
n
347
MET
347
A
HIS
348
n
348
HIS
348
A
ASN
349
n
349
ASN
349
A
ARG
350
n
350
ARG
350
A
CYS
351
n
351
CYS
351
A
ARG
352
n
352
ARG
352
A
MET
353
n
353
MET
353
A
ILE
354
n
354
ILE
354
A
VAL
355
n
355
VAL
355
A
ALA
356
n
356
ALA
356
A
SER
357
n
357
SER
357
A
PHE
358
n
358
PHE
358
A
LEU
359
n
359
LEU
359
A
THR
360
n
360
THR
360
A
LYS
361
n
361
LYS
361
A
ASP
362
n
362
ASP
362
A
LEU
363
n
363
LEU
363
A
ILE
364
n
364
ILE
364
A
ILE
365
n
365
ILE
365
A
ASP
366
n
366
ASP
366
A
TRP
367
n
367
TRP
367
A
ARG
368
n
368
ARG
368
A
ARG
369
n
369
ARG
369
A
GLY
370
n
370
GLY
370
A
GLU
371
n
371
GLU
371
A
GLN
372
n
372
GLN
372
A
PHE
373
n
373
PHE
373
A
PHE
374
n
374
PHE
374
A
MET
375
n
375
MET
375
A
GLN
376
n
376
GLN
376
A
HIS
377
n
377
HIS
377
A
LEU
378
n
378
LEU
378
A
VAL
379
n
379
VAL
379
A
ASP
380
n
380
ASP
380
A
GLY
381
n
381
GLY
381
A
ASP
382
n
382
ASP
382
A
LEU
383
n
383
LEU
383
A
ALA
384
n
384
ALA
384
A
ALA
385
n
385
ALA
385
A
ASN
386
n
386
ASN
386
A
ASN
387
n
387
ASN
387
A
GLY
388
n
388
GLY
388
A
GLY
389
n
389
GLY
389
A
TRP
390
n
390
TRP
390
A
GLN
391
n
391
GLN
391
A
TRP
392
n
392
TRP
392
A
SER
393
n
393
SER
393
A
ALA
394
n
394
ALA
394
A
SER
395
n
395
SER
395
A
SER
396
n
396
SER
396
A
GLY
397
n
397
GLY
397
A
MET
398
n
398
MET
398
A
ASP
399
n
399
ASP
399
A
PRO
400
n
400
PRO
400
A
LYS
401
n
401
LYS
401
A
PRO
402
n
402
PRO
402
A
LEU
403
n
403
LEU
403
A
ARG
404
n
404
ARG
404
A
ILE
405
n
405
ILE
405
A
PHE
406
n
406
PHE
406
A
ASN
407
n
407
ASN
407
A
PRO
408
n
408
PRO
408
A
ALA
409
n
409
ALA
409
A
SER
410
n
410
SER
410
A
GLN
411
n
411
GLN
411
A
ALA
412
n
412
ALA
412
A
LYS
413
n
413
LYS
413
A
LYS
414
n
414
LYS
414
A
PHE
415
n
415
PHE
415
A
ASP
416
n
416
ASP
416
A
ALA
417
n
417
ALA
417
A
THR
418
n
418
THR
418
A
ALA
419
n
419
ALA
419
A
THR
420
n
420
THR
420
A
TYR
421
n
421
TYR
421
A
ILE
422
n
422
ILE
422
A
LYS
423
n
423
LYS
423
A
ARG
424
n
424
ARG
424
A
TRP
425
n
425
TRP
425
A
LEU
426
n
426
LEU
426
A
PRO
427
n
427
PRO
427
A
GLU
428
n
428
GLU
428
A
LEU
429
n
429
LEU
429
A
ARG
430
n
430
ARG
430
A
HIS
431
n
431
HIS
431
A
VAL
432
n
432
VAL
432
A
HIS
433
n
433
HIS
433
A
PRO
434
n
434
PRO
434
A
LYS
435
n
435
LYS
435
A
ASP
436
n
436
ASP
436
A
LEU
437
n
437
LEU
437
A
ILE
438
n
438
ILE
438
A
SER
439
n
439
SER
439
A
GLY
440
n
440
GLY
440
A
GLU
441
n
441
GLU
441
A
ILE
442
n
442
ILE
442
A
THR
443
n
443
THR
443
A
PRO
444
n
444
PRO
444
A
ILE
445
n
445
ILE
445
A
GLU
446
n
446
GLU
446
A
ARG
447
n
447
ARG
447
A
ARG
448
n
448
ARG
448
A
GLY
449
n
449
GLY
449
A
TYR
450
n
450
TYR
450
A
PRO
451
n
451
PRO
451
A
ALA
452
n
452
ALA
452
A
PRO
453
n
453
PRO
453
A
ILE
454
n
454
ILE
454
A
VAL
455
n
455
VAL
455
A
ASN
456
n
456
ASN
456
A
HIS
457
n
457
HIS
457
A
ASN
458
n
458
ASN
458
A
LEU
459
n
459
LEU
459
A
ARG
460
n
460
ARG
460
A
GLN
461
n
461
GLN
461
A
LYS
462
n
462
LYS
462
A
GLN
463
n
463
GLN
463
A
PHE
464
n
464
PHE
464
A
LYS
465
n
465
LYS
465
A
ALA
466
n
466
ALA
466
A
LEU
467
n
467
LEU
467
A
TYR
468
n
468
TYR
468
A
ASN
469
n
469
ASN
469
A
GLN
470
n
470
GLN
470
A
LEU
471
n
471
LEU
471
A
LYS
472
n
472
LYS
472
A
ALA
473
n
473
ALA
473
A
ALA
474
n
474
ALA
474
A
ILE
475
n
475
ILE
475
A
n
476
476
A
n
477
477
A
n
478
478
A
n
479
479
A
n
480
480
A
n
481
481
A
n
482
482
A
n
483
483
A
n
484
484
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
LEU
76
A
O
LEU
76
A
N
LEU
37
A
N
LEU
37
A
O
ILE
32
A
O
ILE
32
A
N
ILE
5
A
N
ILE
5
A
N
LEU
6
A
N
LEU
6
A
O
TYR
97
A
O
TYR
97
A
N
VAL
96
A
N
VAL
96
A
O
ARG
123
A
O
ARG
123
1
A
MET
1
A
MET
1
1
Y
1
A
ALA
476
A
ALA
476
1
Y
1
A
GLU
477
A
GLU
477
1
Y
1
A
PRO
478
A
PRO
478
1
Y
1
A
GLU
479
A
GLU
479
1
Y
1
A
ALA
480
A
ALA
480
1
Y
1
A
GLU
481
A
GLU
481
1
Y
1
A
PRO
482
A
PRO
482
1
Y
1
A
ASP
483
A
ASP
483
1
Y
1
A
SER
484
A
SER
484
1
Y
1
A
ALA
3
-119.68
78.31
1
A
ARG
10
-139.33
-64.68
1
A
ASP
17
31.60
62.03
1
A
SER
71
-130.74
-128.51
1
A
ASP
129
-132.39
-40.56
1
A
ARG
223
-148.20
-76.34
1
A
PRO
304
-36.21
122.99
1
A
ASP
399
36.12
61.16
1
A
ASP
416
-152.11
44.90
1
A
ARG
448
53.25
-122.63
protein_rep.param
protein.top
water.param
carbohydrate.top
ion.param
dna-rna.top
fad.param
water.top
fad.top
65.66
26.05
8.55
0.32
0.00
0.00
0.32
0.00
-0.65
0.241
0.007
0.206
0.208
0.208
2.30
19.97
1227
24394
23597
5.0
97.8
1.00
1.00
Random
1
THROUGHOUT
0
MOLECULAR REPLACEMENT
Engh & Huber
CNS bulk solvent model used
27.9902
0.33724
0.31
0.25
5.00
0.26
0.18
2.30
2.30
19.97
228
4067
58
0
3781
0.007
1.2
20.9
2.28
0.265
0.023
0.228
2.40
138
2869
3048
3007
8
4.6
98.7
0.309
0.024
0.231
2.53
164
2859
3063
3023
8
5.4
98.7
0.267
0.023
0.206
2.69
140
2896
3069
3036
8
4.6
98.9
0.271
0.022
0.217
2.90
155
2903
3095
3058
8
5.1
98.8
0.29
0.023
0.228
3.19
165
2874
3094
3039
8
5.4
98.2
0.204
0.017
0.197
3.65
153
2895
3105
3048
8
5.0
98.1
0.208
0.017
0.177
4.58
143
2922
3161
3065
8
4.7
97.0
0.219
0.017
0.209
19.97
169
2944
3325
3113
8
5.4
93.6
22.5
2.30
19.97
1OWO
39
2
27
2
57
0
24925
24389
2977200.99
27.800000
0.0
1
1
94.3
2.3
2.38
1
68.6
refinement
Axel T. Brunger
axel.brunger@yale.edu
1998
Fortran
CNS
package
1.1
data reduction
HKL-2000
data scaling
SCALEPACK
phasing
CNS
DATA4:photoreduced DNA photolyase / received X-rays dose 1.2 exp15 photons/mm2
1
N
N
2
N
N
3
N
N
4
N
N
A
ASN
18
A
ASN
18
HELX_P
A
ALA
26
A
ALA
26
1
1
9
A
ASP
38
A
ASP
38
HELX_P
A
GLN
43
A
GLN
43
1
2
6
A
ALA
48
A
ALA
48
HELX_P
A
GLY
70
A
GLY
70
1
3
23
A
ASP
79
A
ASP
79
HELX_P
A
LEU
91
A
LEU
91
1
4
13
A
GLU
103
A
GLU
103
HELX_P
A
ALA
120
A
ALA
120
1
5
18
A
VAL
148
A
VAL
148
HELX_P
A
GLN
159
A
GLN
159
1
6
12
A
SER
175
A
SER
175
HELX_P
A
ALA
183
A
ALA
183
1
7
9
A
PRO
184
A
PRO
184
HELX_P
A
LEU
186
A
LEU
186
5
8
3
A
GLY
209
A
GLY
209
HELX_P
A
ARG
223
A
ARG
223
1
9
15
A
ALA
224
A
ALA
224
HELX_P
A
ALA
226
A
ALA
226
5
10
3
A
ASP
227
A
ASP
227
HELX_P
A
ARG
232
A
ARG
232
1
11
6
A
LEU
243
A
LEU
243
HELX_P
A
PHE
249
A
PHE
249
1
12
7
A
GLY
253
A
GLY
253
HELX_P
A
SER
268
A
SER
268
1
13
16
A
SER
270
A
SER
270
HELX_P
A
PHE
297
A
PHE
297
1
14
28
A
PRO
298
A
PRO
298
HELX_P
A
GLY
303
A
GLY
303
5
15
6
A
ARG
306
A
ARG
306
HELX_P
A
GLN
311
A
GLN
311
1
16
6
A
ARG
317
A
ARG
317
HELX_P
A
GLN
326
A
GLN
326
1
17
10
A
TYR
331
A
TYR
331
HELX_P
A
GLY
345
A
GLY
345
1
18
15
A
HIS
348
A
HIS
348
HELX_P
A
ASP
362
A
ASP
362
1
19
15
A
ASP
366
A
ASP
366
HELX_P
A
GLN
376
A
GLN
376
1
20
11
A
ASP
382
A
ASP
382
HELX_P
A
SER
393
A
SER
393
1
21
12
A
ASN
407
A
ASN
407
HELX_P
A
ASP
416
A
ASP
416
1
22
10
A
ALA
419
A
ALA
419
HELX_P
A
LEU
426
A
LEU
426
1
23
8
A
PRO
427
A
PRO
427
HELX_P
A
ARG
430
A
ARG
430
5
24
4
A
HIS
433
A
HIS
433
HELX_P
A
GLY
440
A
GLY
440
1
25
8
A
THR
443
A
THR
443
HELX_P
A
ARG
448
A
ARG
448
1
26
6
A
ASN
456
A
ASN
456
HELX_P
A
ALA
474
A
ALA
474
1
27
19
LYASE
DNA repair, flavin enzyme, Photoreactivating enzyme, lyase
A
ASP
229
A
ASP
229
1
A
PRO
230
A
PRO
230
0.47
PHR_SYNLE
UNP
1
0
P05327
MAAPILFWHRRDLRLSDNIGLAAARAQSAQLIGLFCLDPQILQSADMAPARVAYLQGCLQELQQRYQQAGSRLLLLQGDP
QHLIPQLAQQLQAEAVYWNQDIEPYGRDRDGQVAAALKTAGIRAVQLWDQLLHSPDQILSGSGNPYSVYGPFWKNWQAQP
KPTPVATPTELVDLSPEQLTAIAPLLLSELPTLKQLGFDWDGGFPVEPGETAAIARLQEFCDRAIADYDPQRNFPAEAGT
SGLSPALKFGAIGIRQAWQAASAAHALSRSDEARNSIRVWQQELAWREFYQHALYHFPSLADGPYRSLWQQFPWENREAL
FTAWTQAQTGYPIVDAAMRQLTETGWMHNRCRMIVASFLTKDLIIDWRRGEQFFMQHLVDGDLAANNGGWQWSASSGMDP
KPLRIFNPASQAKKFDATATYIKRWLPELRHVHPKDLISGEITPIERRGYPAPIVNHNLRQKQFKALYNQLKAAIAEPEA
EPDS
0
483
1OWO
1
484
P05327
A
1
1
484
5
parallel
parallel
parallel
parallel
A
LEU
73
A
LEU
73
A
GLN
77
A
GLN
77
A
LEU
31
A
LEU
31
A
LEU
37
A
LEU
37
A
ILE
5
A
ILE
5
A
TRP
8
A
TRP
8
A
ALA
95
A
ALA
95
A
ASN
99
A
ASN
99
A
ARG
123
A
ARG
123
A
LEU
127
A
LEU
127
BINDING SITE FOR RESIDUE PO4 A 486
A
PO4
486
Software
8
BINDING SITE FOR RESIDUE FAD A 485
A
FAD
485
Software
31
A
ARG
11
A
ARG
11
8
1_555
A
ILE
41
A
ILE
41
8
1_555
A
MET
47
A
MET
47
8
1_555
A
ARG
51
A
ARG
51
8
1_555
A
LYS
248
A
LYS
248
8
1_555
A
PHE
249
A
PHE
249
8
1_555
A
HOH
689
D
HOH
8
1_555
A
HOH
690
D
HOH
8
1_555
A
TYR
228
A
TYR
228
31
1_555
A
THR
240
A
THR
240
31
1_555
A
SER
241
A
SER
241
31
1_555
A
GLY
242
A
GLY
242
31
1_555
A
LEU
243
A
LEU
243
31
1_555
A
SER
244
A
SER
244
31
1_555
A
LEU
247
A
LEU
247
31
1_555
A
TRP
280
A
TRP
280
31
1_555
A
GLU
283
A
GLU
283
31
1_555
A
TRP
286
A
TRP
286
31
1_555
A
ARG
287
A
ARG
287
31
1_555
A
TYR
290
A
TYR
290
31
1_555
A
TRP
346
A
TRP
346
31
1_555
A
MET
347
A
MET
347
31
1_555
A
ASN
349
A
ASN
349
31
1_555
A
ARG
352
A
ARG
352
31
1_555
A
MET
353
A
MET
353
31
1_555
A
PHE
374
A
PHE
374
31
1_555
A
LEU
378
A
LEU
378
31
1_555
A
ASP
380
A
ASP
380
31
1_555
A
GLY
381
A
GLY
381
31
1_555
A
ASP
382
A
ASP
382
31
1_555
A
ALA
385
A
ALA
385
31
1_555
A
ASN
386
A
ASN
386
31
1_555
A
GLY
389
A
GLY
389
31
1_555
A
HOH
514
D
HOH
31
1_555
A
HOH
524
D
HOH
31
1_555
A
HOH
592
D
HOH
31
1_555
A
HOH
636
D
HOH
31
1_555
A
HOH
645
D
HOH
31
1_555
A
HOH
681
D
HOH
31
1_555
96
P 43 21 2