0.021803
0.000000
0.000000
0.000000
0.014478
0.000000
0.000000
0.000000
0.013219
0.00000
0.00000
0.00000
Singh, N.
Jabeen, T.
Sharma, S.
Singh, T.P.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
45.866
69.071
75.646
C2 H4 O2
60.052
ACETIC ACID
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C8 H18 O
130.228
6-METHYLHEPTAN-1-OL
METHYL HEPTANOL
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
C
N
2
N
O
N
3
N
O
N
4
N
C
N
5
N
H
N
6
N
H
N
7
N
H
N
8
N
H
N
9
N
N
N
10
S
C
N
11
N
C
N
12
N
O
N
13
N
C
N
14
N
O
N
15
N
H
N
16
N
H
N
17
N
H
N
18
N
H
N
19
N
H
N
20
N
H
N
21
N
H
N
22
N
N
N
23
S
C
N
24
N
C
N
25
N
O
N
26
N
C
N
27
N
C
N
28
N
C
N
29
N
N
N
30
N
C
N
31
N
N
N
32
N
N
N
33
N
O
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
N
N
50
S
C
N
51
N
C
N
52
N
O
N
53
N
C
N
54
N
C
N
55
N
O
N
56
N
N
N
57
N
O
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
N
N
67
S
C
N
68
N
C
N
69
N
O
N
70
N
C
N
71
N
C
N
72
N
O
N
73
N
O
N
74
N
O
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
N
N
83
R
C
N
84
N
C
N
85
N
O
N
86
N
C
N
87
N
S
N
88
N
O
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
N
N
97
S
C
N
98
N
C
N
99
N
O
N
100
N
C
N
101
N
C
N
102
N
C
N
103
N
O
N
104
N
N
N
105
N
O
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
N
N
117
S
C
N
118
N
C
N
119
N
O
N
120
N
C
N
121
N
C
N
122
N
C
N
123
N
O
N
124
N
O
N
125
N
O
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
N
N
136
N
C
N
137
N
C
N
138
N
O
N
139
N
O
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
N
N
146
S
C
N
147
N
C
N
148
N
O
N
149
N
C
Y
150
N
C
Y
151
N
N
Y
152
N
C
Y
153
N
C
Y
154
N
N
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
O
N
167
N
H
N
168
N
H
N
169
N
N
N
170
S
C
N
171
N
C
N
172
N
O
N
173
S
C
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
O
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
N
N
192
S
C
N
193
N
C
N
194
N
O
N
195
N
C
N
196
N
C
N
197
N
C
N
198
N
C
N
199
N
O
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
N
N
214
S
C
N
215
N
C
N
216
N
O
N
217
N
C
N
218
N
C
N
219
N
C
N
220
N
C
N
221
N
N
N
222
N
O
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
N
N
239
S
C
N
240
N
C
N
241
N
O
N
242
N
C
N
243
N
C
N
244
N
S
N
245
N
C
N
246
N
O
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
O
N
259
N
C
N
260
N
C
N
261
N
C
N
262
N
C
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
C
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
N
N
286
S
C
N
287
N
C
N
288
N
O
N
289
N
C
Y
290
N
C
Y
291
N
C
Y
292
N
C
Y
293
N
C
Y
294
N
C
Y
295
N
C
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
N
N
309
S
C
N
310
N
C
N
311
N
O
N
312
N
C
N
313
N
C
N
314
N
C
N
315
N
O
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
N
N
326
S
C
N
327
N
C
N
328
N
O
N
329
N
C
N
330
N
O
N
331
N
O
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
S
N
340
N
O
N
341
N
O
N
342
N
O
N
343
N
O
N
344
N
N
N
345
S
C
N
346
N
C
N
347
N
O
N
348
R
C
N
349
N
O
N
350
N
C
N
351
N
O
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
N
N
362
S
C
N
363
N
C
N
364
N
O
N
365
N
C
Y
366
N
C
Y
367
N
C
Y
368
N
C
Y
369
N
N
Y
370
N
C
Y
371
N
C
Y
372
N
C
Y
373
N
C
Y
374
N
C
N
375
N
O
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
N
N
389
S
C
N
390
N
C
N
391
N
O
N
392
N
C
Y
393
N
C
Y
394
N
C
Y
395
N
C
Y
396
N
C
Y
397
N
C
Y
398
N
C
N
399
N
O
N
400
N
O
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
N
N
413
S
C
N
414
N
C
N
415
N
O
N
416
N
C
N
417
N
C
N
418
N
C
N
419
N
O
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
doub
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
doub
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
doub
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
doub
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
doub
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
doub
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
doub
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
doub
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
doub
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
doub
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
doub
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
Y
147
N
sing
Y
148
N
doub
Y
149
N
doub
N
150
N
sing
Y
151
N
sing
N
152
N
sing
Y
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
doub
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
doub
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
doub
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
doub
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
Y
281
N
doub
Y
282
N
sing
Y
283
N
sing
N
284
N
sing
Y
285
N
doub
N
286
N
sing
Y
287
N
doub
N
288
N
sing
Y
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
doub
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
doub
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
doub
N
324
N
doub
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
doub
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
Y
354
N
doub
Y
355
N
sing
Y
356
N
sing
N
357
N
sing
Y
358
N
doub
Y
359
N
sing
Y
360
N
sing
N
361
N
sing
Y
362
N
sing
Y
363
N
doub
N
364
N
sing
Y
365
N
doub
N
366
N
sing
Y
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
doub
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
Y
382
N
doub
Y
383
N
sing
Y
384
N
sing
N
385
N
sing
Y
386
N
doub
N
387
N
sing
Y
388
N
doub
N
389
N
sing
Y
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
doub
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
To be Published
0353
Crystal Structure of Russelles viper (Daboia russellii pulchella) phospholipase A2 in a complex with venom 6-methyl heptanol
10.2210/pdb1oyf/pdb
pdb_00001oyf
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
291
1
Monochromator
IMAGE PLATE
2002-09-04
MARRESEARCH
Graphite
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
13656.729
Phospholipase A2
3.1.1.4
1
nat
polymer
13657.780
Phospholipase A2
3.1.1.4
1
nat
polymer
96.063
SULFATE ION
1
syn
non-polymer
130.228
6-METHYLHEPTAN-1-OL
2
syn
non-polymer
60.052
ACETIC ACID
1
syn
non-polymer
18.015
water
148
nat
water
no
no
SLLEFGRMILEETGKLAIPSYSSYGCYCGWGGKGTPKDATDRCCFVHDCCYGNLPDCNPQSDRYKYKRVNGAIVCEKGTS
CENRICECDKAAAICFRQNLNTYSKKYMLYPDFLCKGELKC
SLLEFGRMILEETGKLAIPSYSSYGCYCGWGGKGTPKDATDRCCFVHDCCYGNLPDCNPQSDRYKYKRVNGAIVCEKGTS
CENRICECDKAAAICFRQNLNTYSKKYMLYPDFLCKGELKC
A
polypeptide(L)
no
no
SLLEFGKMILEETGRLAIPSYSSYGCYCGWGGKGTPKDATDRCCFVHDCCYGNLPDCNPKSDRYKYKRVNGAIVCEKGTS
CENRICECDKAAAICFRQNLNTYSKKYMLYPDFLCKGELKC
SLLEFGKMILEETGRLAIPSYSSYGCYCGWGGKGTPKDATDRCCFVHDCCYGNLPDCNPKSDRYKYKRVNGAIVCEKGTS
CENRICECDKAAAICFRQNLNTYSKKYMLYPDFLCKGELKC
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Daboia
sample
97228
Daboia russellii pulchella
Venom
russellii
pulchella
Daboia
sample
97228
Daboia russellii pulchella
Venom
russellii
pulchella
1
2.19
43.90
VAPOR DIFFUSION, HANGING DROP
6.5
0.1M Cacodylate buffer, 0.2M Ammonoum Sulphate, 15% PEG8000, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
1
0
2003-05-20
1
1
2008-04-29
1
2
2011-07-13
1
3
2023-10-25
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
First Structural Evidence Of The Inhibition Of Phospholipase A2 By Aristolochic Acid: Crystal Structure Of A Complex Formed Between Phospholipase A2 and Aristolochic Acid
Design Of Specific Inhibitors Of Phospholipase A2: Crystal Structure Of A Complex Formed Between Phospholipase A2 From Daboia Russelli Pulchella and A Designed Pentapeptide Leu-Ala-Ile-Tyr-Ser At 2.0 Resolution
Crystal Structure Of A Complex Formed Between Phospholipase A2 From Daboia Russelli Pulchella and A Designed Pentapeptide Phe-Leu-Ser-Tyr-Lys At 1.8 Resolution
First Structural Evidence Of A Specific Inhibition Of Phospholipase A2 By Vitamin E and Its Implications In Inflammation: Crystal Structure Of The Complex Formed Between Phospholipase A2 and Vitamin E At 1.8 A Resolution
RCSB
Y
PDBJ
2003-04-04
REL
SO4
SULFATE ION
MHN
6-METHYLHEPTAN-1-OL
ACY
ACETIC ACID
HOH
water
1FVO
PDB
experimental model
SO4
1
3
SO4
SO4
2001
A
CSP
1
4
MHN
MHN
1001
A
ACY
1
5
ACY
ACY
3001
A
CSP
2
4
MHN
MHN
1002
B
HOH
1
6
HOH
HOH
3002
A
HOH
2
6
HOH
HOH
3003
A
HOH
4
6
HOH
HOH
3004
A
HOH
6
6
HOH
HOH
3005
A
HOH
7
6
HOH
HOH
3006
A
HOH
8
6
HOH
HOH
3007
A
HOH
9
6
HOH
HOH
3008
A
HOH
11
6
HOH
HOH
3009
A
HOH
12
6
HOH
HOH
3010
A
HOH
13
6
HOH
HOH
3011
A
HOH
14
6
HOH
HOH
3012
A
HOH
15
6
HOH
HOH
3013
A
HOH
16
6
HOH
HOH
3014
A
HOH
18
6
HOH
HOH
3015
A
HOH
19
6
HOH
HOH
3016
A
HOH
20
6
HOH
HOH
3017
A
HOH
21
6
HOH
HOH
3018
A
HOH
22
6
HOH
HOH
3019
A
HOH
23
6
HOH
HOH
3020
A
HOH
24
6
HOH
HOH
3021
A
HOH
25
6
HOH
HOH
3022
A
HOH
26
6
HOH
HOH
3023
A
HOH
27
6
HOH
HOH
3024
A
HOH
28
6
HOH
HOH
3025
A
HOH
29
6
HOH
HOH
3026
A
HOH
30
6
HOH
HOH
3027
A
HOH
31
6
HOH
HOH
3028
A
HOH
32
6
HOH
HOH
3029
A
HOH
33
6
HOH
HOH
3030
A
HOH
34
6
HOH
HOH
3031
A
HOH
35
6
HOH
HOH
3032
A
HOH
36
6
HOH
HOH
3033
A
HOH
37
6
HOH
HOH
3034
A
HOH
64
6
HOH
HOH
3035
A
HOH
66
6
HOH
HOH
3036
A
HOH
68
6
HOH
HOH
3037
A
HOH
69
6
HOH
HOH
3038
A
HOH
70
6
HOH
HOH
3039
A
HOH
71
6
HOH
HOH
3040
A
HOH
73
6
HOH
HOH
3041
A
HOH
74
6
HOH
HOH
3042
A
HOH
77
6
HOH
HOH
3043
A
HOH
78
6
HOH
HOH
3044
A
HOH
79
6
HOH
HOH
3045
A
HOH
80
6
HOH
HOH
3046
A
HOH
81
6
HOH
HOH
3047
A
HOH
82
6
HOH
HOH
3048
A
HOH
83
6
HOH
HOH
3049
A
HOH
84
6
HOH
HOH
3050
A
HOH
85
6
HOH
HOH
3051
A
HOH
97
6
HOH
HOH
3052
A
HOH
98
6
HOH
HOH
3053
A
HOH
100
6
HOH
HOH
3054
A
HOH
101
6
HOH
HOH
3055
A
HOH
102
6
HOH
HOH
3056
A
HOH
103
6
HOH
HOH
3057
A
HOH
105
6
HOH
HOH
3058
A
HOH
108
6
HOH
HOH
3059
A
HOH
109
6
HOH
HOH
3060
A
HOH
110
6
HOH
HOH
3061
A
HOH
111
6
HOH
HOH
3062
A
HOH
112
6
HOH
HOH
3063
A
HOH
113
6
HOH
HOH
3064
A
HOH
114
6
HOH
HOH
3065
A
HOH
116
6
HOH
HOH
3066
A
HOH
117
6
HOH
HOH
3067
A
HOH
118
6
HOH
HOH
3068
A
HOH
119
6
HOH
HOH
3069
A
HOH
120
6
HOH
HOH
3070
A
HOH
121
6
HOH
HOH
3071
A
HOH
122
6
HOH
HOH
3072
A
HOH
125
6
HOH
HOH
3073
A
HOH
134
6
HOH
HOH
3074
A
HOH
140
6
HOH
HOH
3075
A
HOH
143
6
HOH
HOH
3076
A
HOH
144
6
HOH
HOH
3077
A
HOH
3
6
HOH
HOH
1003
B
HOH
5
6
HOH
HOH
1004
B
HOH
10
6
HOH
HOH
1005
B
HOH
17
6
HOH
HOH
1006
B
HOH
38
6
HOH
HOH
1007
B
HOH
39
6
HOH
HOH
1008
B
HOH
40
6
HOH
HOH
1009
B
HOH
41
6
HOH
HOH
1010
B
HOH
42
6
HOH
HOH
1011
B
HOH
43
6
HOH
HOH
1012
B
HOH
44
6
HOH
HOH
1013
B
HOH
45
6
HOH
HOH
1014
B
HOH
46
6
HOH
HOH
1015
B
HOH
47
6
HOH
HOH
1016
B
HOH
48
6
HOH
HOH
1017
B
HOH
49
6
HOH
HOH
1018
B
HOH
50
6
HOH
HOH
1019
B
HOH
51
6
HOH
HOH
1020
B
HOH
52
6
HOH
HOH
1021
B
HOH
53
6
HOH
HOH
1022
B
HOH
54
6
HOH
HOH
1023
B
HOH
55
6
HOH
HOH
1024
B
HOH
56
6
HOH
HOH
1025
B
HOH
57
6
HOH
HOH
1026
B
HOH
58
6
HOH
HOH
1027
B
HOH
59
6
HOH
HOH
1028
B
HOH
60
6
HOH
HOH
1029
B
HOH
61
6
HOH
HOH
1030
B
HOH
62
6
HOH
HOH
1031
B
HOH
63
6
HOH
HOH
1032
B
HOH
65
6
HOH
HOH
1033
B
HOH
67
6
HOH
HOH
1034
B
HOH
72
6
HOH
HOH
1035
B
HOH
75
6
HOH
HOH
1036
B
HOH
76
6
HOH
HOH
1037
B
HOH
86
6
HOH
HOH
1038
B
HOH
87
6
HOH
HOH
1039
B
HOH
88
6
HOH
HOH
1040
B
HOH
89
6
HOH
HOH
1041
B
HOH
90
6
HOH
HOH
1042
B
HOH
91
6
HOH
HOH
1043
B
HOH
92
6
HOH
HOH
1044
B
HOH
93
6
HOH
HOH
1045
B
HOH
94
6
HOH
HOH
1046
B
HOH
95
6
HOH
HOH
1047
B
HOH
96
6
HOH
HOH
1048
B
HOH
99
6
HOH
HOH
1049
B
HOH
104
6
HOH
HOH
1050
B
HOH
106
6
HOH
HOH
1051
B
HOH
107
6
HOH
HOH
1052
B
HOH
115
6
HOH
HOH
1053
B
HOH
123
6
HOH
HOH
1054
B
HOH
124
6
HOH
HOH
1055
B
HOH
126
6
HOH
HOH
1056
B
HOH
127
6
HOH
HOH
1057
B
HOH
128
6
HOH
HOH
1058
B
HOH
129
6
HOH
HOH
1059
B
HOH
130
6
HOH
HOH
1060
B
HOH
131
6
HOH
HOH
1061
B
HOH
132
6
HOH
HOH
1062
B
HOH
133
6
HOH
HOH
1063
B
HOH
135
6
HOH
HOH
1064
B
HOH
136
6
HOH
HOH
1065
B
HOH
137
6
HOH
HOH
1066
B
HOH
138
6
HOH
HOH
1067
B
HOH
139
6
HOH
HOH
1068
B
HOH
141
6
HOH
HOH
1069
B
HOH
142
6
HOH
HOH
1070
B
HOH
145
6
HOH
HOH
1071
B
HOH
146
6
HOH
HOH
1072
B
HOH
147
6
HOH
HOH
1073
B
HOH
148
6
HOH
HOH
1074
B
SER
1
n
1
SER
1
A
LEU
2
n
2
LEU
2
A
LEU
3
n
3
LEU
3
A
GLU
4
n
4
GLU
4
A
PHE
5
n
5
PHE
5
A
GLY
6
n
6
GLY
6
A
ARG
7
n
7
ARG
7
A
MET
8
n
8
MET
8
A
ILE
9
n
9
ILE
9
A
LEU
10
n
10
LEU
10
A
GLU
11
n
11
GLU
11
A
GLU
12
n
12
GLU
12
A
THR
13
n
13
THR
13
A
GLY
14
n
14
GLY
14
A
LYS
16
n
15
LYS
16
A
LEU
17
n
16
LEU
17
A
ALA
18
n
17
ALA
18
A
ILE
19
n
18
ILE
19
A
PRO
20
n
19
PRO
20
A
SER
21
n
20
SER
21
A
TYR
22
n
21
TYR
22
A
SER
23
n
22
SER
23
A
SER
24
n
23
SER
24
A
TYR
25
n
24
TYR
25
A
GLY
26
n
25
GLY
26
A
CYS
27
n
26
CYS
27
A
TYR
28
n
27
TYR
28
A
CYS
29
n
28
CYS
29
A
GLY
30
n
29
GLY
30
A
TRP
31
n
30
TRP
31
A
GLY
32
n
31
GLY
32
A
GLY
33
n
32
GLY
33
A
LYS
34
n
33
LYS
34
A
GLY
35
n
34
GLY
35
A
THR
36
n
35
THR
36
A
PRO
37
n
36
PRO
37
A
LYS
38
n
37
LYS
38
A
ASP
39
n
38
ASP
39
A
ALA
40
n
39
ALA
40
A
THR
41
n
40
THR
41
A
ASP
42
n
41
ASP
42
A
ARG
43
n
42
ARG
43
A
CYS
44
n
43
CYS
44
A
CYS
45
n
44
CYS
45
A
PHE
46
n
45
PHE
46
A
VAL
47
n
46
VAL
47
A
HIS
48
n
47
HIS
48
A
ASP
49
n
48
ASP
49
A
CYS
50
n
49
CYS
50
A
CYS
51
n
50
CYS
51
A
TYR
52
n
51
TYR
52
A
GLY
53
n
52
GLY
53
A
ASN
54
n
53
ASN
54
A
LEU
55
n
54
LEU
55
A
PRO
56
n
55
PRO
56
A
ASP
59
n
56
ASP
59
A
CYS
61
n
57
CYS
61
A
ASN
67
n
58
ASN
67
A
PRO
68
n
59
PRO
68
A
GLN
69
n
60
GLN
69
A
SER
70
n
61
SER
70
A
ASP
71
n
62
ASP
71
A
ARG
72
n
63
ARG
72
A
TYR
73
n
64
TYR
73
A
LYS
74
n
65
LYS
74
A
TYR
75
n
66
TYR
75
A
LYS
76
n
67
LYS
76
A
ARG
77
n
68
ARG
77
A
VAL
78
n
69
VAL
78
A
ASN
79
n
70
ASN
79
A
GLY
80
n
71
GLY
80
A
ALA
81
n
72
ALA
81
A
ILE
82
n
73
ILE
82
A
VAL
83
n
74
VAL
83
A
CYS
84
n
75
CYS
84
A
GLU
85
n
76
GLU
85
A
LYS
86
n
77
LYS
86
A
GLY
88
n
78
GLY
88
A
THR
89
n
79
THR
89
A
SER
90
n
80
SER
90
A
CYS
91
n
81
CYS
91
A
GLU
92
n
82
GLU
92
A
ASN
93
n
83
ASN
93
A
ARG
94
n
84
ARG
94
A
ILE
95
n
85
ILE
95
A
CYS
96
n
86
CYS
96
A
GLU
97
n
87
GLU
97
A
CYS
98
n
88
CYS
98
A
ASP
99
n
89
ASP
99
A
LYS
100
n
90
LYS
100
A
ALA
101
n
91
ALA
101
A
ALA
102
n
92
ALA
102
A
ALA
103
n
93
ALA
103
A
ILE
104
n
94
ILE
104
A
CYS
105
n
95
CYS
105
A
PHE
106
n
96
PHE
106
A
ARG
107
n
97
ARG
107
A
GLN
108
n
98
GLN
108
A
ASN
109
n
99
ASN
109
A
LEU
110
n
100
LEU
110
A
ASN
111
n
101
ASN
111
A
THR
112
n
102
THR
112
A
TYR
113
n
103
TYR
113
A
SER
114
n
104
SER
114
A
LYS
115
n
105
LYS
115
A
LYS
116
n
106
LYS
116
A
TYR
117
n
107
TYR
117
A
MET
118
n
108
MET
118
A
LEU
119
n
109
LEU
119
A
TYR
120
n
110
TYR
120
A
PRO
121
n
111
PRO
121
A
ASP
122
n
112
ASP
122
A
PHE
124
n
113
PHE
124
A
LEU
125
n
114
LEU
125
A
CYS
126
n
115
CYS
126
A
LYS
127
n
116
LYS
127
A
GLY
128
n
117
GLY
128
A
GLU
129
n
118
GLU
129
A
LEU
130
n
119
LEU
130
A
LYS
131
n
120
LYS
131
A
CYS
133
n
121
CYS
133
A
SER
1
n
1
SER
1
B
LEU
2
n
2
LEU
2
B
LEU
3
n
3
LEU
3
B
GLU
4
n
4
GLU
4
B
PHE
5
n
5
PHE
5
B
GLY
6
n
6
GLY
6
B
LYS
7
n
7
LYS
7
B
MET
8
n
8
MET
8
B
ILE
9
n
9
ILE
9
B
LEU
10
n
10
LEU
10
B
GLU
11
n
11
GLU
11
B
GLU
12
n
12
GLU
12
B
THR
13
n
13
THR
13
B
GLY
14
n
14
GLY
14
B
ARG
16
n
15
ARG
16
B
LEU
17
n
16
LEU
17
B
ALA
18
n
17
ALA
18
B
ILE
19
n
18
ILE
19
B
PRO
20
n
19
PRO
20
B
SER
21
n
20
SER
21
B
TYR
22
n
21
TYR
22
B
SER
23
n
22
SER
23
B
SER
24
n
23
SER
24
B
TYR
25
n
24
TYR
25
B
GLY
26
n
25
GLY
26
B
CYS
27
n
26
CYS
27
B
TYR
28
n
27
TYR
28
B
CYS
29
n
28
CYS
29
B
GLY
30
n
29
GLY
30
B
TRP
31
n
30
TRP
31
B
GLY
32
n
31
GLY
32
B
GLY
33
n
32
GLY
33
B
LYS
34
n
33
LYS
34
B
GLY
35
n
34
GLY
35
B
THR
36
n
35
THR
36
B
PRO
37
n
36
PRO
37
B
LYS
38
n
37
LYS
38
B
ASP
39
n
38
ASP
39
B
ALA
40
n
39
ALA
40
B
THR
41
n
40
THR
41
B
ASP
42
n
41
ASP
42
B
ARG
43
n
42
ARG
43
B
CYS
44
n
43
CYS
44
B
CYS
45
n
44
CYS
45
B
PHE
46
n
45
PHE
46
B
VAL
47
n
46
VAL
47
B
HIS
48
n
47
HIS
48
B
ASP
49
n
48
ASP
49
B
CYS
50
n
49
CYS
50
B
CYS
51
n
50
CYS
51
B
TYR
52
n
51
TYR
52
B
GLY
53
n
52
GLY
53
B
ASN
54
n
53
ASN
54
B
LEU
55
n
54
LEU
55
B
PRO
56
n
55
PRO
56
B
ASP
59
n
56
ASP
59
B
CYS
61
n
57
CYS
61
B
ASN
67
n
58
ASN
67
B
PRO
68
n
59
PRO
68
B
LYS
69
n
60
LYS
69
B
SER
70
n
61
SER
70
B
ASP
71
n
62
ASP
71
B
ARG
72
n
63
ARG
72
B
TYR
73
n
64
TYR
73
B
LYS
74
n
65
LYS
74
B
TYR
75
n
66
TYR
75
B
LYS
76
n
67
LYS
76
B
ARG
77
n
68
ARG
77
B
VAL
78
n
69
VAL
78
B
ASN
79
n
70
ASN
79
B
GLY
80
n
71
GLY
80
B
ALA
81
n
72
ALA
81
B
ILE
82
n
73
ILE
82
B
VAL
83
n
74
VAL
83
B
CYS
84
n
75
CYS
84
B
GLU
85
n
76
GLU
85
B
LYS
86
n
77
LYS
86
B
GLY
88
n
78
GLY
88
B
THR
89
n
79
THR
89
B
SER
90
n
80
SER
90
B
CYS
91
n
81
CYS
91
B
GLU
92
n
82
GLU
92
B
ASN
93
n
83
ASN
93
B
ARG
94
n
84
ARG
94
B
ILE
95
n
85
ILE
95
B
CYS
96
n
86
CYS
96
B
GLU
97
n
87
GLU
97
B
CYS
98
n
88
CYS
98
B
ASP
99
n
89
ASP
99
B
LYS
100
n
90
LYS
100
B
ALA
101
n
91
ALA
101
B
ALA
102
n
92
ALA
102
B
ALA
103
n
93
ALA
103
B
ILE
104
n
94
ILE
104
B
CYS
105
n
95
CYS
105
B
PHE
106
n
96
PHE
106
B
ARG
107
n
97
ARG
107
B
GLN
108
n
98
GLN
108
B
ASN
109
n
99
ASN
109
B
LEU
110
n
100
LEU
110
B
ASN
111
n
101
ASN
111
B
THR
112
n
102
THR
112
B
TYR
113
n
103
TYR
113
B
SER
114
n
104
SER
114
B
LYS
115
n
105
LYS
115
B
LYS
116
n
106
LYS
116
B
TYR
117
n
107
TYR
117
B
MET
118
n
108
MET
118
B
LEU
119
n
109
LEU
119
B
TYR
120
n
110
TYR
120
B
PRO
121
n
111
PRO
121
B
ASP
122
n
112
ASP
122
B
PHE
124
n
113
PHE
124
B
LEU
125
n
114
LEU
125
B
CYS
126
n
115
CYS
126
B
LYS
127
n
116
LYS
127
B
GLY
128
n
117
GLY
128
B
GLU
129
n
118
GLU
129
B
LEU
130
n
119
LEU
130
B
LYS
131
n
120
LYS
131
B
CYS
133
n
121
CYS
133
B
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LYS
76
A
N
LYS
67
A
O
VAL
83
A
O
VAL
74
B
N
LYS
76
B
N
LYS
67
B
O
VAL
83
B
O
VAL
74
1
A
A
C
CD
ILE
PRO
19
20
1.67
1
B
B
C
CD
ILE
PRO
19
20
1.69
1
A
TRP
31
-13.23
A
1
A
A
TRP
GLY
31
32
A
-130.67
1
A
A
C
N
GLY
TRP
30
31
2.55
B
1
45.47
1.50
119.30
164.77
A
A
A
C
N
CA
ILE
PRO
PRO
19
20
20
Y
1
-55.77
2.10
128.40
72.63
A
A
A
C
N
CD
ILE
PRO
PRO
19
20
20
Y
1
-10.15
1.40
111.70
101.55
A
A
A
CA
N
CD
PRO
PRO
PRO
20
20
20
N
1
-15.71
2.50
113.10
97.39
A
A
A
N
CA
C
GLY
GLY
GLY
30
30
30
N
1
17.26
2.20
117.20
134.46
A
A
A
CA
C
N
GLY
GLY
TRP
30
30
31
A
Y
1
-18.88
1.60
122.70
103.82
A
A
A
O
C
N
GLY
GLY
TRP
30
30
31
A
Y
1
-33.19
2.00
110.40
77.21
A
A
A
CB
CA
C
TRP
TRP
TRP
31
31
31
B
B
B
N
1
5.33
0.80
106.30
111.63
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
31
31
31
B
B
B
N
1
-33.06
2.70
111.00
77.94
A
A
A
N
CA
C
TRP
TRP
TRP
31
31
31
B
B
B
N
1
14.50
2.00
116.20
130.70
A
A
A
CA
C
N
TRP
TRP
GLY
31
31
32
A
A
Y
1
-19.78
1.70
123.20
103.42
A
A
A
O
C
N
TRP
TRP
GLY
31
31
32
A
A
Y
1
32.01
2.10
122.30
154.31
A
A
A
C
N
CA
TRP
GLY
GLY
31
32
32
B
Y
1
-14.48
1.90
110.30
95.82
A
A
A
N
CA
CB
THR
THR
THR
36
36
36
N
1
-11.85
1.40
112.40
100.55
A
A
A
CA
CB
CG2
THR
THR
THR
36
36
36
N
1
-17.62
2.70
111.00
93.38
A
A
A
N
CA
C
THR
THR
THR
36
36
36
N
1
11.01
1.50
119.30
130.31
A
A
A
C
N
CA
ASN
PRO
PRO
67
68
68
Y
1
-11.92
1.80
114.00
102.08
A
A
A
CA
CB
SG
CYS
CYS
CYS
105
105
105
N
1
18.29
2.30
115.30
133.59
A
A
A
CA
CB
CG
LEU
LEU
LEU
130
130
130
N
1
-16.20
1.60
122.70
106.50
A
A
A
O
C
N
LYS
LYS
CYS
131
131
133
Y
1
53.07
1.50
119.30
172.37
B
B
B
C
N
CA
ILE
PRO
PRO
19
20
20
Y
1
-54.49
2.10
128.40
73.91
B
B
B
C
N
CD
ILE
PRO
PRO
19
20
20
Y
1
-9.12
1.40
111.70
102.58
B
B
B
CA
N
CD
PRO
PRO
PRO
20
20
20
N
1
10.75
1.50
119.30
130.05
B
B
B
C
N
CA
ASN
PRO
PRO
67
68
68
Y
1
23.31
2.70
111.00
134.31
B
B
B
N
CA
C
LYS
LYS
LYS
127
127
127
N
1
-16.45
2.70
111.00
94.55
B
B
B
N
CA
C
GLU
GLU
GLU
129
129
129
N
1
A
A
N
CA
TRP
TRP
31
31
-0.331
0.020
1.459
1.128
B
B
N
1
A
A
CB
CG
TRP
TRP
31
31
-0.119
0.018
1.498
1.379
B
B
N
1
A
A
N
CA
GLY
GLY
32
32
-0.245
0.015
1.456
1.211
N
1
A
A
N
CA
THR
THR
36
36
0.282
0.020
1.459
1.741
N
1
A
A
CA
CB
VAL
VAL
78
78
0.126
0.021
1.543
1.669
N
1
A
PRO
20
105.62
-58.46
1
A
SER
24
-145.64
33.86
1
A
PRO
37
-29.71
129.72
1
A
PRO
121
-58.94
100.73
1
B
PRO
20
105.16
-63.57
1
B
SER
24
-144.01
46.94
1
B
LEU
55
-107.78
54.22
1
B
LYS
127
-95.63
-73.26
PROTEIN_REP.PARAM
PROTEIN.TOP
WATER_REP.PARAM
WATER.TOP
ION.PARAM
ION.TOP
CSP.PARAM
CSP.TOP
SUL.PARAM
SUL.TOP
27.3
Trp31 im molecule A is having double positions. Both were refined separately.
The distance between the C of GLY A 30 and alternate conformation B of TRP A 31 is long.
0.235
0.012
0.192
0.195
0.192
2.45
19.86
390
7345
7345
5.3
79.1
RANDOM
173506.47
0.000000
1
RESTRAINED
THROUGHOUT
0.0
0
MOLECULAR REPLACEMENT
1FVO
Engh & Huber
FLAT MODEL
40.0431
0.347483
0.35
0.27
5.0
0.35
0.31
2.45
19.86
148
2067
27
0
1892
0.010
2.8
24.1
1.17
2.04
1.50
3.27
2.00
3.18
2.00
4.72
2.50
0.211
0.050
0.278
2.59
18
398
6
4.3
27.4
18.9
2.4
20
1OYF
58251
7984
0
0
0.072
1
25.2
7.3
98.1
2.4
2.5
3.2
0.31
95.3
refinement
CNS
0.9
data reduction
DENZO
data scaling
SCALEPACK
phasing
AMoRE
Crystal Structure of Russelles viper (Daboia russellii pulchella) phospholipase A2 in a complex with venom 6-methyl heptanol
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
4
N
N
6
N
N
6
N
N
A
SER
1
A
SER
1
HELX_P
A
THR
13
A
THR
13
1
1
13
A
LEU
17
A
LEU
16
HELX_P
A
TYR
22
A
TYR
21
1
2
6
A
ASP
39
A
ASP
38
HELX_P
A
GLY
53
A
GLY
52
1
3
15
A
THR
89
A
THR
79
HELX_P
A
ASN
109
A
ASN
99
1
4
21
A
LEU
110
A
LEU
100
HELX_P
A
TYR
113
A
TYR
103
5
5
4
A
SER
114
A
SER
104
HELX_P
A
MET
118
A
MET
108
5
6
5
A
PRO
121
A
PRO
111
HELX_P
A
CYS
126
A
CYS
115
5
7
5
B
SER
1
B
SER
1
HELX_P
B
GLY
14
B
GLY
14
1
8
14
B
ASP
39
B
ASP
38
HELX_P
B
ASN
54
B
ASN
53
1
9
16
B
THR
89
B
THR
79
HELX_P
B
ASN
109
B
ASN
99
1
10
21
B
SER
114
B
SER
104
HELX_P
B
MET
118
B
MET
108
5
11
5
B
PRO
121
B
PRO
111
HELX_P
B
CYS
126
B
CYS
115
5
12
5
disulf
2.030
A
CYS
27
A
SG
CYS
26
1_555
A
CYS
126
A
SG
CYS
115
1_555
disulf
2.034
A
CYS
29
A
SG
CYS
28
1_555
A
CYS
45
A
SG
CYS
44
1_555
disulf
1.995
A
CYS
44
A
SG
CYS
43
1_555
A
CYS
105
A
SG
CYS
95
1_555
disulf
1.160
A
CYS
50
A
SG
CYS
49
1_555
A
CYS
133
A
SG
CYS
121
1_555
disulf
2.022
A
CYS
51
A
SG
CYS
50
1_555
A
CYS
98
A
SG
CYS
88
1_555
disulf
2.030
A
CYS
61
A
SG
CYS
57
1_555
A
CYS
91
A
SG
CYS
81
1_555
disulf
2.031
A
CYS
84
A
SG
CYS
75
1_555
A
CYS
96
A
SG
CYS
86
1_555
disulf
2.020
B
CYS
27
B
SG
CYS
26
1_555
B
CYS
126
B
SG
CYS
115
1_555
disulf
2.026
B
CYS
29
B
SG
CYS
28
1_555
B
CYS
45
B
SG
CYS
44
1_555
disulf
2.027
B
CYS
44
B
SG
CYS
43
1_555
B
CYS
105
B
SG
CYS
95
1_555
disulf
2.028
B
CYS
50
B
SG
CYS
49
1_555
B
CYS
133
B
SG
CYS
121
1_555
disulf
2.028
B
CYS
51
B
SG
CYS
50
1_555
B
CYS
98
B
SG
CYS
88
1_555
disulf
2.025
B
CYS
61
B
SG
CYS
57
1_555
B
CYS
91
B
SG
CYS
81
1_555
disulf
2.029
B
CYS
84
B
SG
CYS
75
1_555
B
CYS
96
B
SG
CYS
86
1_555
HYDROLASE
Phospholipase A2, complex, Catalysis, Inhibition, Hydrolase
PA28_DABRP
UNP
1
1
P59071
1OYF
PDB
2
1OYF
1
121
1OYF
1
133
P59071
A
1
1
121
1
133
1OYF
1
133
1OYF
B
2
1
121
2
2
anti-parallel
anti-parallel
A
TYR
75
A
TYR
66
A
VAL
78
A
VAL
69
A
ALA
81
A
ALA
72
A
CYS
84
A
CYS
75
B
TYR
75
B
TYR
66
B
VAL
78
B
VAL
69
B
ALA
81
B
ALA
72
B
CYS
84
B
CYS
75
BINDING SITE FOR RESIDUE SO4 A 2001
A
SO4
2001
Software
5
BINDING SITE FOR RESIDUE MHN A 1001
A
MHN
1001
Software
4
BINDING SITE FOR RESIDUE MHN B 1002
B
MHN
1002
Software
6
BINDING SITE FOR RESIDUE ACY A 3001
A
ACY
3001
Software
2
A
ASN
67
A
ASN
58
5
1_555
A
PRO
68
A
PRO
59
5
1_555
A
GLN
69
A
GLN
60
5
1_555
A
SER
70
A
SER
61
5
1_555
A
HOH
3045
G
HOH
5
1_555
A
ALA
18
A
ALA
17
4
1_555
A
CYS
45
A
CYS
44
4
1_555
A
HIS
48
A
HIS
47
4
1_555
A
ASP
49
A
ASP
48
4
1_555
B
LEU
2
B
LEU
2
6
1_555
B
ALA
18
B
ALA
17
6
1_555
B
TYR
22
B
TYR
21
6
1_555
B
CYS
45
B
CYS
44
6
1_555
B
HIS
48
B
HIS
47
6
1_555
B
ASP
49
B
ASP
48
6
1_555
A
ALA
40
A
ALA
39
2
1_555
A
HOH
3029
G
HOH
2
1_555
19
P 21 21 21