data_1P1Y # _entry.id 1P1Y # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1P1Y pdb_00001p1y 10.2210/pdb1p1y/pdb NDB UD0031 ? ? RCSB RCSB018912 ? ? WWPDB D_1000018912 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-06-01 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2011-11-02 5 'Structure model' 1 4 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Non-polymer description' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' pdbx_struct_conn_angle 5 5 'Structure model' struct_conn 6 5 'Structure model' struct_conn_type 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 4 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 5 5 'Structure model' '_pdbx_struct_conn_angle.value' 6 5 'Structure model' '_struct_conn.conn_type_id' 7 5 'Structure model' '_struct_conn.id' 8 5 'Structure model' '_struct_conn.pdbx_dist_value' 9 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 10 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 11 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 12 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 13 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 14 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 15 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 16 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 17 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 18 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 19 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 20 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 21 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 22 5 'Structure model' '_struct_conn_type.id' 23 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 24 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 25 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1P1Y _pdbx_database_status.recvd_initial_deposition_date 2003-04-14 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Paukstelis, P.J.' 1 'Nowakowski, J.' 2 'Birktoft, J.J.' 3 'Seeman, N.C.' 4 # _citation.id primary _citation.title 'Crystal structure of a continuous three-dimensional DNA lattice.' _citation.journal_abbrev Chem.Biol. _citation.journal_volume 11 _citation.page_first 1119 _citation.page_last 1126 _citation.year 2004 _citation.journal_id_ASTM CBOLE2 _citation.country UK _citation.journal_id_ISSN 1074-5521 _citation.journal_id_CSD 2050 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15324813 _citation.pdbx_database_id_DOI 10.1016/j.chembiol.2004.05.021 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Paukstelis, P.J.' 1 ? primary 'Nowakowski, J.' 2 ? primary 'Birktoft, J.J.' 3 ? primary 'Seeman, N.C.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*GP*GP*AP*(CBR)P*AP*GP*AP*(BRU)P*GP*GP*GP*AP*G)-3'" 4249.451 1 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 water nat water 18.015 23 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(DG)(DG)(DA)(CBR)(DA)(DG)(DA)(BRU)(DG)(DG)(DG)(DA)(DG)' _entity_poly.pdbx_seq_one_letter_code_can GGACAGAUGGGAG _entity_poly.pdbx_strand_id X _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DG n 1 3 DA n 1 4 CBR n 1 5 DA n 1 6 DG n 1 7 DA n 1 8 BRU n 1 9 DG n 1 10 DG n 1 11 DG n 1 12 DA n 1 13 DG n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight BRU 'DNA linking' n "5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" ? 'C9 H12 Br N2 O8 P' 387.078 CBR 'DNA linking' n "5-BROMO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 Br N3 O7 P' 386.093 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG G X . n A 1 2 DG 2 2 2 DG G X . n A 1 3 DA 3 3 3 DA A X . n A 1 4 CBR 4 4 4 CBR CBR X . n A 1 5 DA 5 5 5 DA A X . n A 1 6 DG 6 6 6 DG G X . n A 1 7 DA 7 7 7 DA A X . n A 1 8 BRU 8 8 8 BRU BRU X . n A 1 9 DG 9 9 9 DG G X . n A 1 10 DG 10 10 10 DG G X . n A 1 11 DG 11 11 11 DG G X . n A 1 12 DA 12 12 12 DA A X . n A 1 13 DG 13 13 13 DG G X . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 51 51 MG MO4 X . C 3 HOH 1 52 1 HOH HOH X . C 3 HOH 2 53 2 HOH HOH X . C 3 HOH 3 54 3 HOH HOH X . C 3 HOH 4 55 4 HOH HOH X . C 3 HOH 5 56 5 HOH HOH X . C 3 HOH 6 57 6 HOH HOH X . C 3 HOH 7 58 7 HOH HOH X . C 3 HOH 8 59 8 HOH HOH X . C 3 HOH 9 60 9 HOH HOH X . C 3 HOH 10 61 11 HOH HOH X . C 3 HOH 11 62 13 HOH HOH X . C 3 HOH 12 63 14 HOH HOH X . C 3 HOH 13 64 15 HOH HOH X . C 3 HOH 14 65 20 HOH HOH X . C 3 HOH 15 66 22 HOH HOH X . C 3 HOH 16 67 23 HOH HOH X . C 3 HOH 17 68 25 HOH HOH X . C 3 HOH 18 69 26 HOH HOH X . C 3 HOH 19 70 27 HOH HOH X . C 3 HOH 20 71 51 HOH MO4 X . C 3 HOH 21 72 51 HOH MO4 X . C 3 HOH 22 73 51 HOH MO4 X . C 3 HOH 23 74 51 HOH MO4 X . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 X DG 13 ? "C5'" ? A DG 13 "C5'" 2 1 Y 1 X DG 13 ? "C4'" ? A DG 13 "C4'" 3 1 Y 1 X DG 13 ? "O4'" ? A DG 13 "O4'" 4 1 Y 1 X DG 13 ? "C3'" ? A DG 13 "C3'" 5 1 Y 1 X DG 13 ? "O3'" ? A DG 13 "O3'" 6 1 Y 1 X DG 13 ? "C2'" ? A DG 13 "C2'" 7 1 Y 1 X DG 13 ? "C1'" ? A DG 13 "C1'" 8 1 Y 1 X DG 13 ? N9 ? A DG 13 N9 9 1 Y 1 X DG 13 ? C8 ? A DG 13 C8 10 1 Y 1 X DG 13 ? N7 ? A DG 13 N7 11 1 Y 1 X DG 13 ? C5 ? A DG 13 C5 12 1 Y 1 X DG 13 ? C6 ? A DG 13 C6 13 1 Y 1 X DG 13 ? O6 ? A DG 13 O6 14 1 Y 1 X DG 13 ? N1 ? A DG 13 N1 15 1 Y 1 X DG 13 ? C2 ? A DG 13 C2 16 1 Y 1 X DG 13 ? N2 ? A DG 13 N2 17 1 Y 1 X DG 13 ? N3 ? A DG 13 N3 18 1 Y 1 X DG 13 ? C4 ? A DG 13 C4 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.24 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 CNS phasing . ? 4 # _cell.entry_id 1P1Y _cell.length_a 40.630 _cell.length_b 40.630 _cell.length_c 55.270 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1P1Y _symmetry.space_group_name_H-M 'P 64' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 172 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1P1Y _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.97 _exptl_crystal.density_percent_sol 58.52 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 295.5 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_details 'magnesium formate, mpd, lithium chloride, VAPOR DIFFUSION, SITTING DROP, temperature 295.5K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'magnesium formate' ? ? ? 1 2 1 mpd ? ? ? 1 3 1 LiCl ? ? ? 1 4 2 mpd ? ? ? 1 5 2 LiCl ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2002-08-04 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.92002 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X8C' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X8C _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.92002 # _reflns.entry_id 1P1Y _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 1.8 _reflns.d_resolution_low 50 _reflns.number_all 5957 _reflns.number_obs 3066 _reflns.percent_possible_obs 99 _reflns.pdbx_Rmerge_I_obs 0.071 _reflns.pdbx_Rsym_value 0.071 _reflns.pdbx_netI_over_sigmaI 20.7 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.10 _reflns_shell.d_res_low 2.18 _reflns_shell.percent_possible_all 99.4 _reflns_shell.Rmerge_I_obs 0.22 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 13.76 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 307 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1P1Y _refine.ls_number_reflns_obs 2870 _refine.ls_number_reflns_all 2907 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 35.14 _refine.ls_d_res_high 2.10 _refine.ls_percent_reflns_obs 98.70 _refine.ls_R_factor_obs 0.20485 _refine.ls_R_factor_all 0.20485 _refine.ls_R_factor_R_work 0.20332 _refine.ls_R_factor_R_free 0.23256 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.3 _refine.ls_number_reflns_R_free 161 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.956 _refine.correlation_coeff_Fo_to_Fc_free 0.940 _refine.B_iso_mean 39.727 _refine.aniso_B[1][1] -1.50 _refine.aniso_B[2][2] -1.50 _refine.aniso_B[3][3] 2.24 _refine.aniso_B[1][2] -0.75 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.163 _refine.pdbx_overall_ESU_R_Free 0.156 _refine.overall_SU_ML 0.096 _refine.overall_SU_B 3.627 _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 257 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 23 _refine_hist.number_atoms_total 281 _refine_hist.d_res_high 2.10 _refine_hist.d_res_low 35.14 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.020 0.021 ? 292 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 3.133 3.000 ? 451 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.120 0.200 ? 36 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.013 0.020 ? 142 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.381 0.200 ? 74 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.187 0.200 ? 11 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.113 0.200 ? 20 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.065 0.200 ? 5 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.100 _refine_ls_shell.d_res_low 2.155 _refine_ls_shell.number_reflns_R_work 217 _refine_ls_shell.R_factor_R_work 0.228 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.258 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 16 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 1P1Y _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1P1Y _struct.title 'Crystal structure of a continuous three-dimensional DNA lattice from d(GGACAGATGGGAG)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1P1Y _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'continuous three-dimensional dna lattice, parallel-stranded base pairs, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1P1Y _struct_ref.pdbx_db_accession 1P1Y _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1P1Y _struct_ref_seq.pdbx_strand_id X _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 13 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 1P1Y _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 13 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 13 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_435 -x-1,-y-2,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 -70.3732243115 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DA 3 "O3'" ? ? ? 1_555 A CBR 4 P ? ? X DA 3 X CBR 4 1_555 ? ? ? ? ? ? ? 1.595 ? ? covale2 covale both ? A CBR 4 "O3'" ? ? ? 1_555 A DA 5 P ? ? X CBR 4 X DA 5 1_555 ? ? ? ? ? ? ? 1.593 ? ? covale3 covale both ? A DA 7 "O3'" ? ? ? 1_555 A BRU 8 P ? ? X DA 7 X BRU 8 1_555 ? ? ? ? ? ? ? 1.574 ? ? covale4 covale both ? A BRU 8 "O3'" ? ? ? 1_555 A DG 9 P ? ? X BRU 8 X DG 9 1_555 ? ? ? ? ? ? ? 1.565 ? ? metalc1 metalc ? ? B MG . MG ? ? ? 1_555 C HOH . O ? ? X MG 51 X HOH 71 1_555 ? ? ? ? ? ? ? 2.159 ? ? metalc2 metalc ? ? B MG . MG ? ? ? 1_555 C HOH . O ? ? X MG 51 X HOH 72 1_555 ? ? ? ? ? ? ? 2.168 ? ? metalc3 metalc ? ? B MG . MG ? ? ? 1_555 C HOH . O ? ? X MG 51 X HOH 73 1_555 ? ? ? ? ? ? ? 2.167 ? ? metalc4 metalc ? ? B MG . MG ? ? ? 1_555 C HOH . O ? ? X MG 51 X HOH 74 1_555 ? ? ? ? ? ? ? 2.164 ? ? hydrog1 hydrog ? ? A DG 1 N7 ? ? ? 1_555 A DG 10 N1 ? ? X DG 1 X DG 10 6_454 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog2 hydrog ? ? A DG 1 O6 ? ? ? 1_555 A DG 10 N2 ? ? X DG 1 X DG 10 6_454 ? ? ? ? ? ? TYPE_7_PAIR ? ? ? hydrog3 hydrog ? ? A DG 2 N2 ? ? ? 1_555 A DG 11 N3 ? ? X DG 2 X DG 11 6_454 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog4 hydrog ? ? A DG 2 N3 ? ? ? 1_555 A DG 11 N2 ? ? X DG 2 X DG 11 6_454 ? ? ? ? ? ? TYPE_4_PAIR ? ? ? hydrog5 hydrog ? ? A DA 3 N6 ? ? ? 1_555 A DA 12 N7 ? ? X DA 3 X DA 12 6_454 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? hydrog6 hydrog ? ? A DA 3 N7 ? ? ? 1_555 A DA 12 N6 ? ? X DA 3 X DA 12 6_454 ? ? ? ? ? ? TYPE_2_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? C HOH . ? X HOH 71 ? 1_555 MG ? B MG . ? X MG 51 ? 1_555 O ? C HOH . ? X HOH 72 ? 1_555 178.7 ? 2 O ? C HOH . ? X HOH 71 ? 1_555 MG ? B MG . ? X MG 51 ? 1_555 O ? C HOH . ? X HOH 73 ? 1_555 93.5 ? 3 O ? C HOH . ? X HOH 72 ? 1_555 MG ? B MG . ? X MG 51 ? 1_555 O ? C HOH . ? X HOH 73 ? 1_555 87.0 ? 4 O ? C HOH . ? X HOH 71 ? 1_555 MG ? B MG . ? X MG 51 ? 1_555 O ? C HOH . ? X HOH 74 ? 1_555 83.8 ? 5 O ? C HOH . ? X HOH 72 ? 1_555 MG ? B MG . ? X MG 51 ? 1_555 O ? C HOH . ? X HOH 74 ? 1_555 95.0 ? 6 O ? C HOH . ? X HOH 73 ? 1_555 MG ? B MG . ? X MG 51 ? 1_555 O ? C HOH . ? X HOH 74 ? 1_555 93.7 ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id X _struct_site.pdbx_auth_comp_id MG _struct_site.pdbx_auth_seq_id 51 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'BINDING SITE FOR RESIDUE MG X 51' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 HOH C . ? HOH X 71 . ? 1_555 ? 2 AC1 4 HOH C . ? HOH X 72 . ? 1_555 ? 3 AC1 4 HOH C . ? HOH X 73 . ? 1_555 ? 4 AC1 4 HOH C . ? HOH X 74 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 N3 X DA 3 ? ? C4 X DA 3 ? ? 1.296 1.344 -0.048 0.006 N 2 1 "O3'" X DG 9 ? ? "C3'" X DG 9 ? ? 1.378 1.419 -0.041 0.006 N 3 1 N3 X DA 12 ? ? C4 X DA 12 ? ? 1.305 1.344 -0.039 0.006 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" X DG 1 ? ? "C1'" X DG 1 ? ? N9 X DG 1 ? ? 110.19 108.30 1.89 0.30 N 2 1 "O4'" X DG 2 ? ? "C1'" X DG 2 ? ? "C2'" X DG 2 ? ? 99.75 105.90 -6.15 0.80 N 3 1 "O4'" X DA 3 ? ? "C4'" X DA 3 ? ? "C3'" X DA 3 ? ? 96.80 104.50 -7.70 0.40 N 4 1 "C1'" X DA 3 ? ? "O4'" X DA 3 ? ? "C4'" X DA 3 ? ? 118.99 110.30 8.69 0.70 N 5 1 "O4'" X DA 3 ? ? "C1'" X DA 3 ? ? "C2'" X DA 3 ? ? 98.39 105.90 -7.51 0.80 N 6 1 "O4'" X DA 3 ? ? "C1'" X DA 3 ? ? N9 X DA 3 ? ? 99.65 108.00 -8.35 0.70 N 7 1 N1 X DA 3 ? ? C2 X DA 3 ? ? N3 X DA 3 ? ? 125.18 129.30 -4.12 0.50 N 8 1 C2 X DA 3 ? ? N3 X DA 3 ? ? C4 X DA 3 ? ? 116.67 110.60 6.07 0.50 N 9 1 C4 X DA 5 ? ? C5 X DA 5 ? ? N7 X DA 5 ? ? 107.58 110.70 -3.12 0.50 N 10 1 N1 X DA 5 ? ? C6 X DA 5 ? ? N6 X DA 5 ? ? 114.19 118.60 -4.41 0.60 N 11 1 "C3'" X DG 6 ? ? "C2'" X DG 6 ? ? "C1'" X DG 6 ? ? 96.61 102.40 -5.79 0.80 N 12 1 "O4'" X DG 6 ? ? "C1'" X DG 6 ? ? N9 X DG 6 ? ? 114.23 108.30 5.93 0.30 N 13 1 N1 X DG 6 ? ? C2 X DG 6 ? ? N3 X DG 6 ? ? 120.03 123.90 -3.87 0.60 N 14 1 "O4'" X DA 7 ? ? "C1'" X DA 7 ? ? N9 X DA 7 ? ? 111.22 108.30 2.92 0.30 N 15 1 "C3'" X DG 9 ? ? "C2'" X DG 9 ? ? "C1'" X DG 9 ? ? 93.48 102.40 -8.92 0.80 N 16 1 "O4'" X DG 9 ? ? "C1'" X DG 9 ? ? N9 X DG 9 ? ? 110.79 108.30 2.49 0.30 N 17 1 C5 X DG 9 ? ? C6 X DG 9 ? ? O6 X DG 9 ? ? 124.76 128.60 -3.84 0.60 N 18 1 "O4'" X DG 11 ? ? "C4'" X DG 11 ? ? "C3'" X DG 11 ? ? 101.70 104.50 -2.80 0.40 N 19 1 "C1'" X DG 11 ? ? "O4'" X DG 11 ? ? "C4'" X DG 11 ? ? 114.74 110.30 4.44 0.70 N 20 1 N1 X DG 11 ? ? C6 X DG 11 ? ? O6 X DG 11 ? ? 113.48 119.90 -6.42 0.60 N 21 1 C5 X DG 11 ? ? C6 X DG 11 ? ? O6 X DG 11 ? ? 132.21 128.60 3.61 0.60 N 22 1 "O5'" X DA 12 ? ? P X DA 12 ? ? OP1 X DA 12 ? ? 118.72 110.70 8.02 1.20 N 23 1 C4 X DA 12 ? ? C5 X DA 12 ? ? N7 X DA 12 ? ? 107.29 110.70 -3.41 0.50 N 24 1 C5 X DA 12 ? ? N7 X DA 12 ? ? C8 X DA 12 ? ? 108.44 103.90 4.54 0.50 N 25 1 N1 X DA 12 ? ? C6 X DA 12 ? ? N6 X DA 12 ? ? 114.57 118.60 -4.03 0.60 N 26 1 OP1 X DG 13 ? ? P X DG 13 ? ? OP2 X DG 13 ? ? 130.12 119.60 10.52 1.50 N # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A CBR 4 X CBR 4 ? DC ? 2 A BRU 8 X BRU 8 ? DU ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal BRU N1 N N N 1 BRU C2 C N N 2 BRU N3 N N N 3 BRU C4 C N N 4 BRU C5 C N N 5 BRU C6 C N N 6 BRU O2 O N N 7 BRU O4 O N N 8 BRU BR BR N N 9 BRU "C1'" C N R 10 BRU "C2'" C N N 11 BRU "C3'" C N S 12 BRU "C4'" C N R 13 BRU "O3'" O N N 14 BRU "O4'" O N N 15 BRU "C5'" C N N 16 BRU "O5'" O N N 17 BRU P P N N 18 BRU OP1 O N N 19 BRU OP2 O N N 20 BRU OP3 O N N 21 BRU HN3 H N N 22 BRU H6 H N N 23 BRU "H1'" H N N 24 BRU "H2'" H N N 25 BRU "H2''" H N N 26 BRU "H3'" H N N 27 BRU "H4'" H N N 28 BRU "HO3'" H N N 29 BRU "H5'" H N N 30 BRU "H5''" H N N 31 BRU HOP2 H N N 32 BRU HOP3 H N N 33 CBR BR BR N N 34 CBR P P N N 35 CBR OP1 O N N 36 CBR OP2 O N N 37 CBR "O5'" O N N 38 CBR N1 N N N 39 CBR C6 C N N 40 CBR C2 C N N 41 CBR O2 O N N 42 CBR N3 N N N 43 CBR C4 C N N 44 CBR N4 N N N 45 CBR C5 C N N 46 CBR "C2'" C N N 47 CBR "C5'" C N N 48 CBR "C4'" C N R 49 CBR "O4'" O N N 50 CBR "C1'" C N R 51 CBR "C3'" C N S 52 CBR "O3'" O N N 53 CBR OP3 O N N 54 CBR HOP2 H N N 55 CBR H6 H N N 56 CBR H41 H N N 57 CBR H42 H N N 58 CBR "H2'" H N N 59 CBR "H2''" H N N 60 CBR "H5'" H N N 61 CBR "H5''" H N N 62 CBR "H4'" H N N 63 CBR "H1'" H N N 64 CBR "H3'" H N N 65 CBR "HO3'" H N N 66 CBR HOP3 H N N 67 DA OP3 O N N 68 DA P P N N 69 DA OP1 O N N 70 DA OP2 O N N 71 DA "O5'" O N N 72 DA "C5'" C N N 73 DA "C4'" C N R 74 DA "O4'" O N N 75 DA "C3'" C N S 76 DA "O3'" O N N 77 DA "C2'" C N N 78 DA "C1'" C N R 79 DA N9 N Y N 80 DA C8 C Y N 81 DA N7 N Y N 82 DA C5 C Y N 83 DA C6 C Y N 84 DA N6 N N N 85 DA N1 N Y N 86 DA C2 C Y N 87 DA N3 N Y N 88 DA C4 C Y N 89 DA HOP3 H N N 90 DA HOP2 H N N 91 DA "H5'" H N N 92 DA "H5''" H N N 93 DA "H4'" H N N 94 DA "H3'" H N N 95 DA "HO3'" H N N 96 DA "H2'" H N N 97 DA "H2''" H N N 98 DA "H1'" H N N 99 DA H8 H N N 100 DA H61 H N N 101 DA H62 H N N 102 DA H2 H N N 103 DG OP3 O N N 104 DG P P N N 105 DG OP1 O N N 106 DG OP2 O N N 107 DG "O5'" O N N 108 DG "C5'" C N N 109 DG "C4'" C N R 110 DG "O4'" O N N 111 DG "C3'" C N S 112 DG "O3'" O N N 113 DG "C2'" C N N 114 DG "C1'" C N R 115 DG N9 N Y N 116 DG C8 C Y N 117 DG N7 N Y N 118 DG C5 C Y N 119 DG C6 C N N 120 DG O6 O N N 121 DG N1 N N N 122 DG C2 C N N 123 DG N2 N N N 124 DG N3 N N N 125 DG C4 C Y N 126 DG HOP3 H N N 127 DG HOP2 H N N 128 DG "H5'" H N N 129 DG "H5''" H N N 130 DG "H4'" H N N 131 DG "H3'" H N N 132 DG "HO3'" H N N 133 DG "H2'" H N N 134 DG "H2''" H N N 135 DG "H1'" H N N 136 DG H8 H N N 137 DG H1 H N N 138 DG H21 H N N 139 DG H22 H N N 140 HOH O O N N 141 HOH H1 H N N 142 HOH H2 H N N 143 MG MG MG N N 144 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal BRU N1 C2 sing N N 1 BRU N1 C6 sing N N 2 BRU N1 "C1'" sing N N 3 BRU C2 N3 sing N N 4 BRU C2 O2 doub N N 5 BRU N3 C4 sing N N 6 BRU N3 HN3 sing N N 7 BRU C4 C5 sing N N 8 BRU C4 O4 doub N N 9 BRU C5 C6 doub N N 10 BRU C5 BR sing N N 11 BRU C6 H6 sing N N 12 BRU "C1'" "C2'" sing N N 13 BRU "C1'" "O4'" sing N N 14 BRU "C1'" "H1'" sing N N 15 BRU "C2'" "C3'" sing N N 16 BRU "C2'" "H2'" sing N N 17 BRU "C2'" "H2''" sing N N 18 BRU "C3'" "C4'" sing N N 19 BRU "C3'" "O3'" sing N N 20 BRU "C3'" "H3'" sing N N 21 BRU "C4'" "O4'" sing N N 22 BRU "C4'" "C5'" sing N N 23 BRU "C4'" "H4'" sing N N 24 BRU "O3'" "HO3'" sing N N 25 BRU "C5'" "O5'" sing N N 26 BRU "C5'" "H5'" sing N N 27 BRU "C5'" "H5''" sing N N 28 BRU "O5'" P sing N N 29 BRU P OP1 doub N N 30 BRU P OP2 sing N N 31 BRU P OP3 sing N N 32 BRU OP2 HOP2 sing N N 33 BRU OP3 HOP3 sing N N 34 CBR BR C5 sing N N 35 CBR P OP1 doub N N 36 CBR P OP2 sing N N 37 CBR P "O5'" sing N N 38 CBR P OP3 sing N N 39 CBR OP2 HOP2 sing N N 40 CBR "O5'" "C5'" sing N N 41 CBR N1 C6 sing N N 42 CBR N1 C2 sing N N 43 CBR N1 "C1'" sing N N 44 CBR C6 C5 doub N N 45 CBR C6 H6 sing N N 46 CBR C2 O2 doub N N 47 CBR C2 N3 sing N N 48 CBR N3 C4 doub N N 49 CBR C4 N4 sing N N 50 CBR C4 C5 sing N N 51 CBR N4 H41 sing N N 52 CBR N4 H42 sing N N 53 CBR "C2'" "C1'" sing N N 54 CBR "C2'" "C3'" sing N N 55 CBR "C2'" "H2'" sing N N 56 CBR "C2'" "H2''" sing N N 57 CBR "C5'" "C4'" sing N N 58 CBR "C5'" "H5'" sing N N 59 CBR "C5'" "H5''" sing N N 60 CBR "C4'" "O4'" sing N N 61 CBR "C4'" "C3'" sing N N 62 CBR "C4'" "H4'" sing N N 63 CBR "O4'" "C1'" sing N N 64 CBR "C1'" "H1'" sing N N 65 CBR "C3'" "O3'" sing N N 66 CBR "C3'" "H3'" sing N N 67 CBR "O3'" "HO3'" sing N N 68 CBR OP3 HOP3 sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DG OP3 P sing N N 108 DG OP3 HOP3 sing N N 109 DG P OP1 doub N N 110 DG P OP2 sing N N 111 DG P "O5'" sing N N 112 DG OP2 HOP2 sing N N 113 DG "O5'" "C5'" sing N N 114 DG "C5'" "C4'" sing N N 115 DG "C5'" "H5'" sing N N 116 DG "C5'" "H5''" sing N N 117 DG "C4'" "O4'" sing N N 118 DG "C4'" "C3'" sing N N 119 DG "C4'" "H4'" sing N N 120 DG "O4'" "C1'" sing N N 121 DG "C3'" "O3'" sing N N 122 DG "C3'" "C2'" sing N N 123 DG "C3'" "H3'" sing N N 124 DG "O3'" "HO3'" sing N N 125 DG "C2'" "C1'" sing N N 126 DG "C2'" "H2'" sing N N 127 DG "C2'" "H2''" sing N N 128 DG "C1'" N9 sing N N 129 DG "C1'" "H1'" sing N N 130 DG N9 C8 sing Y N 131 DG N9 C4 sing Y N 132 DG C8 N7 doub Y N 133 DG C8 H8 sing N N 134 DG N7 C5 sing Y N 135 DG C5 C6 sing N N 136 DG C5 C4 doub Y N 137 DG C6 O6 doub N N 138 DG C6 N1 sing N N 139 DG N1 C2 sing N N 140 DG N1 H1 sing N N 141 DG C2 N2 sing N N 142 DG C2 N3 doub N N 143 DG N2 H21 sing N N 144 DG N2 H22 sing N N 145 DG N3 C4 sing N N 146 HOH O H1 sing N N 147 HOH O H2 sing N N 148 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1P1Y 'double helix' 1P1Y 'parallel strands' 1P1Y 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 A DG 10 6_454 -5.716 -0.518 -0.213 -2.683 -6.650 -112.497 1 X_DG1:DG10_X X 1 ? X 10 ? 7 4 1 A DG 2 1_555 A DG 11 6_454 3.179 8.009 -0.574 -0.455 24.789 174.581 2 X_DG2:DG11_X X 2 ? X 11 ? 4 12 1 A DA 3 1_555 A DA 12 6_454 -5.402 5.487 0.167 -7.038 29.923 -179.699 3 X_DA3:DA12_X X 3 ? X 12 ? 2 7 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 A DG 10 6_454 A DG 2 1_555 A DG 11 6_454 4.877 -0.870 1.701 -111.194 131.801 26.996 0.048 -2.035 -3.306 68.114 57.465 172.650 1 XX_DG1DG2:DG11DG10_XX X 1 ? X 10 ? X 2 ? X 11 ? 1 A DG 2 1_555 A DG 11 6_454 A DA 3 1_555 A DA 12 6_454 0.032 0.071 4.480 -0.242 1.746 173.703 0.034 -0.016 4.480 0.875 0.121 173.704 2 XX_DG2DA3:DA12DG11_XX X 2 ? X 11 ? X 3 ? X 12 ? # _atom_sites.entry_id 1P1Y _atom_sites.fract_transf_matrix[1][1] 0.024612 _atom_sites.fract_transf_matrix[1][2] 0.014210 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.028420 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018093 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BR C MG N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DG A 1 1 ? 0.440 -24.603 -25.341 1.00 38.25 ? 1 DG X "O5'" 1 ATOM 2 C "C5'" . DG A 1 1 ? 0.960 -23.532 -24.665 1.00 40.25 ? 1 DG X "C5'" 1 ATOM 3 C "C4'" . DG A 1 1 ? 0.970 -23.785 -23.148 1.00 40.56 ? 1 DG X "C4'" 1 ATOM 4 O "O4'" . DG A 1 1 ? -0.350 -24.131 -22.675 1.00 40.15 ? 1 DG X "O4'" 1 ATOM 5 C "C3'" . DG A 1 1 ? 1.842 -24.941 -22.731 1.00 40.78 ? 1 DG X "C3'" 1 ATOM 6 O "O3'" . DG A 1 1 ? 2.492 -24.510 -21.528 1.00 42.70 ? 1 DG X "O3'" 1 ATOM 7 C "C2'" . DG A 1 1 ? 0.868 -26.112 -22.595 1.00 38.86 ? 1 DG X "C2'" 1 ATOM 8 C "C1'" . DG A 1 1 ? -0.314 -25.356 -22.009 1.00 37.68 ? 1 DG X "C1'" 1 ATOM 9 N N9 . DG A 1 1 ? -1.584 -26.021 -22.124 1.00 35.34 ? 1 DG X N9 1 ATOM 10 C C8 . DG A 1 1 ? -2.325 -26.410 -21.065 1.00 35.47 ? 1 DG X C8 1 ATOM 11 N N7 . DG A 1 1 ? -3.432 -27.015 -21.392 1.00 35.18 ? 1 DG X N7 1 ATOM 12 C C5 . DG A 1 1 ? -3.406 -27.013 -22.755 1.00 33.01 ? 1 DG X C5 1 ATOM 13 C C6 . DG A 1 1 ? -4.361 -27.512 -23.645 1.00 33.66 ? 1 DG X C6 1 ATOM 14 O O6 . DG A 1 1 ? -5.395 -28.079 -23.371 1.00 35.74 ? 1 DG X O6 1 ATOM 15 N N1 . DG A 1 1 ? -3.994 -27.329 -24.967 1.00 35.55 ? 1 DG X N1 1 ATOM 16 C C2 . DG A 1 1 ? -2.813 -26.697 -25.353 1.00 35.57 ? 1 DG X C2 1 ATOM 17 N N2 . DG A 1 1 ? -2.587 -26.571 -26.641 1.00 39.80 ? 1 DG X N2 1 ATOM 18 N N3 . DG A 1 1 ? -1.917 -26.224 -24.538 1.00 34.13 ? 1 DG X N3 1 ATOM 19 C C4 . DG A 1 1 ? -2.271 -26.410 -23.237 1.00 34.79 ? 1 DG X C4 1 ATOM 20 P P . DG A 1 2 ? 3.738 -25.305 -20.962 1.00 42.12 ? 2 DG X P 1 ATOM 21 O OP1 . DG A 1 2 ? 4.363 -24.454 -19.955 1.00 43.75 ? 2 DG X OP1 1 ATOM 22 O OP2 . DG A 1 2 ? 4.447 -26.031 -21.995 1.00 37.06 ? 2 DG X OP2 1 ATOM 23 O "O5'" . DG A 1 2 ? 2.969 -26.461 -20.097 1.00 39.25 ? 2 DG X "O5'" 1 ATOM 24 C "C5'" . DG A 1 2 ? 2.199 -26.121 -19.000 1.00 35.52 ? 2 DG X "C5'" 1 ATOM 25 C "C4'" . DG A 1 2 ? 1.560 -27.358 -18.471 1.00 35.20 ? 2 DG X "C4'" 1 ATOM 26 O "O4'" . DG A 1 2 ? 0.551 -27.740 -19.409 1.00 34.51 ? 2 DG X "O4'" 1 ATOM 27 C "C3'" . DG A 1 2 ? 2.452 -28.617 -18.365 1.00 34.27 ? 2 DG X "C3'" 1 ATOM 28 O "O3'" . DG A 1 2 ? 2.259 -29.319 -17.112 1.00 33.39 ? 2 DG X "O3'" 1 ATOM 29 C "C2'" . DG A 1 2 ? 1.896 -29.528 -19.439 1.00 32.68 ? 2 DG X "C2'" 1 ATOM 30 C "C1'" . DG A 1 2 ? 0.433 -29.148 -19.453 1.00 32.90 ? 2 DG X "C1'" 1 ATOM 31 N N9 . DG A 1 2 ? -0.313 -29.470 -20.674 1.00 32.12 ? 2 DG X N9 1 ATOM 32 C C8 . DG A 1 2 ? 0.178 -29.270 -21.953 1.00 32.15 ? 2 DG X C8 1 ATOM 33 N N7 . DG A 1 2 ? -0.649 -29.629 -22.889 1.00 32.72 ? 2 DG X N7 1 ATOM 34 C C5 . DG A 1 2 ? -1.738 -30.103 -22.178 1.00 32.26 ? 2 DG X C5 1 ATOM 35 C C6 . DG A 1 2 ? -2.965 -30.606 -22.663 1.00 33.81 ? 2 DG X C6 1 ATOM 36 O O6 . DG A 1 2 ? -3.290 -30.742 -23.860 1.00 36.81 ? 2 DG X O6 1 ATOM 37 N N1 . DG A 1 2 ? -3.840 -30.983 -21.637 1.00 33.73 ? 2 DG X N1 1 ATOM 38 C C2 . DG A 1 2 ? -3.538 -30.898 -20.321 1.00 31.85 ? 2 DG X C2 1 ATOM 39 N N2 . DG A 1 2 ? -4.493 -31.348 -19.496 1.00 32.99 ? 2 DG X N2 1 ATOM 40 N N3 . DG A 1 2 ? -2.395 -30.439 -19.850 1.00 30.84 ? 2 DG X N3 1 ATOM 41 C C4 . DG A 1 2 ? -1.551 -30.016 -20.823 1.00 31.87 ? 2 DG X C4 1 ATOM 42 P P . DA A 1 3 ? 3.331 -29.387 -15.995 1.00 34.11 ? 3 DA X P 1 ATOM 43 O OP1 . DA A 1 3 ? 4.180 -28.226 -15.934 1.00 36.86 ? 3 DA X OP1 1 ATOM 44 O OP2 . DA A 1 3 ? 3.963 -30.613 -16.298 1.00 35.32 ? 3 DA X OP2 1 ATOM 45 O "O5'" . DA A 1 3 ? 2.503 -29.611 -14.686 1.00 33.37 ? 3 DA X "O5'" 1 ATOM 46 C "C5'" . DA A 1 3 ? 1.456 -28.834 -14.236 1.00 33.20 ? 3 DA X "C5'" 1 ATOM 47 C "C4'" . DA A 1 3 ? 0.848 -29.522 -13.011 1.00 33.56 ? 3 DA X "C4'" 1 ATOM 48 O "O4'" . DA A 1 3 ? -0.041 -30.579 -13.369 1.00 32.58 ? 3 DA X "O4'" 1 ATOM 49 C "C3'" . DA A 1 3 ? 1.753 -30.346 -12.108 1.00 32.68 ? 3 DA X "C3'" 1 ATOM 50 O "O3'" . DA A 1 3 ? 1.112 -30.268 -10.817 1.00 34.17 ? 3 DA X "O3'" 1 ATOM 51 C "C2'" . DA A 1 3 ? 1.686 -31.744 -12.741 1.00 28.33 ? 3 DA X "C2'" 1 ATOM 52 C "C1'" . DA A 1 3 ? 0.244 -31.891 -12.931 1.00 28.74 ? 3 DA X "C1'" 1 ATOM 53 N N9 . DA A 1 3 ? -0.189 -32.647 -14.118 1.00 26.39 ? 3 DA X N9 1 ATOM 54 C C8 . DA A 1 3 ? 0.116 -32.289 -15.407 1.00 26.84 ? 3 DA X C8 1 ATOM 55 N N7 . DA A 1 3 ? -0.427 -33.081 -16.290 1.00 29.89 ? 3 DA X N7 1 ATOM 56 C C5 . DA A 1 3 ? -1.210 -33.966 -15.543 1.00 27.18 ? 3 DA X C5 1 ATOM 57 C C6 . DA A 1 3 ? -2.057 -35.045 -15.876 1.00 27.29 ? 3 DA X C6 1 ATOM 58 N N6 . DA A 1 3 ? -2.306 -35.463 -17.142 1.00 28.10 ? 3 DA X N6 1 ATOM 59 N N1 . DA A 1 3 ? -2.668 -35.719 -14.837 1.00 27.67 ? 3 DA X N1 1 ATOM 60 C C2 . DA A 1 3 ? -2.462 -35.283 -13.588 1.00 26.84 ? 3 DA X C2 1 ATOM 61 N N3 . DA A 1 3 ? -1.666 -34.282 -13.252 1.00 25.63 ? 3 DA X N3 1 ATOM 62 C C4 . DA A 1 3 ? -1.071 -33.661 -14.222 1.00 25.41 ? 3 DA X C4 1 HETATM 63 BR BR . CBR A 1 4 ? 1.016 -26.307 -6.562 0.60 48.48 ? 4 CBR X BR 1 HETATM 64 P P . CBR A 1 4 ? 1.427 -29.092 -9.787 1.00 38.01 ? 4 CBR X P 1 HETATM 65 O OP1 . CBR A 1 4 ? 0.703 -29.464 -8.578 1.00 42.49 ? 4 CBR X OP1 1 HETATM 66 O OP2 . CBR A 1 4 ? 1.199 -27.791 -10.366 1.00 37.96 ? 4 CBR X OP2 1 HETATM 67 O "O5'" . CBR A 1 4 ? 2.988 -29.128 -9.551 1.00 37.28 ? 4 CBR X "O5'" 1 HETATM 68 N N1 . CBR A 1 4 ? 4.496 -28.290 -5.872 1.00 37.86 ? 4 CBR X N1 1 HETATM 69 C C6 . CBR A 1 4 ? 3.439 -27.712 -6.483 1.00 36.06 ? 4 CBR X C6 1 HETATM 70 C C2 . CBR A 1 4 ? 4.585 -28.347 -4.449 1.00 38.03 ? 4 CBR X C2 1 HETATM 71 O O2 . CBR A 1 4 ? 5.568 -28.882 -3.860 1.00 39.42 ? 4 CBR X O2 1 HETATM 72 N N3 . CBR A 1 4 ? 3.604 -27.754 -3.730 1.00 37.11 ? 4 CBR X N3 1 HETATM 73 C C4 . CBR A 1 4 ? 2.587 -27.214 -4.344 1.00 36.52 ? 4 CBR X C4 1 HETATM 74 N N4 . CBR A 1 4 ? 1.644 -26.696 -3.571 1.00 39.21 ? 4 CBR X N4 1 HETATM 75 C C5 . CBR A 1 4 ? 2.480 -27.161 -5.745 1.00 35.92 ? 4 CBR X C5 1 HETATM 76 C "C2'" . CBR A 1 4 ? 5.383 -30.406 -6.490 1.00 41.02 ? 4 CBR X "C2'" 1 HETATM 77 C "C5'" . CBR A 1 4 ? 3.606 -30.214 -8.928 1.00 37.25 ? 4 CBR X "C5'" 1 HETATM 78 C "C4'" . CBR A 1 4 ? 5.081 -29.923 -8.757 1.00 41.45 ? 4 CBR X "C4'" 1 HETATM 79 O "O4'" . CBR A 1 4 ? 5.276 -28.626 -8.049 1.00 41.57 ? 4 CBR X "O4'" 1 HETATM 80 C "C1'" . CBR A 1 4 ? 5.530 -28.900 -6.681 1.00 39.87 ? 4 CBR X "C1'" 1 HETATM 81 C "C3'" . CBR A 1 4 ? 5.662 -30.999 -7.876 1.00 42.24 ? 4 CBR X "C3'" 1 HETATM 82 O "O3'" . CBR A 1 4 ? 7.074 -31.170 -8.020 1.00 46.16 ? 4 CBR X "O3'" 1 ATOM 83 P P . DA A 1 5 ? 7.771 -32.549 -8.406 1.00 48.30 ? 5 DA X P 1 ATOM 84 O OP1 . DA A 1 5 ? 8.500 -32.049 -9.593 1.00 50.58 ? 5 DA X OP1 1 ATOM 85 O OP2 . DA A 1 5 ? 6.773 -33.569 -8.443 1.00 48.61 ? 5 DA X OP2 1 ATOM 86 O "O5'" . DA A 1 5 ? 8.705 -32.953 -7.223 1.00 51.01 ? 5 DA X "O5'" 1 ATOM 87 C "C5'" . DA A 1 5 ? 8.170 -32.700 -5.966 1.00 52.68 ? 5 DA X "C5'" 1 ATOM 88 C "C4'" . DA A 1 5 ? 8.778 -33.466 -4.832 1.00 53.92 ? 5 DA X "C4'" 1 ATOM 89 O "O4'" . DA A 1 5 ? 7.844 -33.359 -3.724 1.00 52.34 ? 5 DA X "O4'" 1 ATOM 90 C "C3'" . DA A 1 5 ? 8.826 -34.965 -5.073 1.00 55.56 ? 5 DA X "C3'" 1 ATOM 91 O "O3'" . DA A 1 5 ? 9.648 -35.563 -4.082 1.00 57.84 ? 5 DA X "O3'" 1 ATOM 92 C "C2'" . DA A 1 5 ? 7.343 -35.369 -4.879 1.00 55.38 ? 5 DA X "C2'" 1 ATOM 93 C "C1'" . DA A 1 5 ? 6.830 -34.393 -3.810 1.00 53.19 ? 5 DA X "C1'" 1 ATOM 94 N N9 . DA A 1 5 ? 5.570 -33.705 -4.118 1.00 48.90 ? 5 DA X N9 1 ATOM 95 C C8 . DA A 1 5 ? 4.887 -33.598 -5.281 1.00 46.94 ? 5 DA X C8 1 ATOM 96 N N7 . DA A 1 5 ? 3.818 -32.854 -5.165 1.00 46.08 ? 5 DA X N7 1 ATOM 97 C C5 . DA A 1 5 ? 3.808 -32.380 -3.860 1.00 44.79 ? 5 DA X C5 1 ATOM 98 C C6 . DA A 1 5 ? 2.966 -31.522 -3.081 1.00 42.48 ? 5 DA X C6 1 ATOM 99 N N6 . DA A 1 5 ? 1.863 -30.876 -3.472 1.00 42.68 ? 5 DA X N6 1 ATOM 100 N N1 . DA A 1 5 ? 3.295 -31.317 -1.813 1.00 41.96 ? 5 DA X N1 1 ATOM 101 C C2 . DA A 1 5 ? 4.380 -31.893 -1.321 1.00 44.52 ? 5 DA X C2 1 ATOM 102 N N3 . DA A 1 5 ? 5.252 -32.707 -1.933 1.00 47.46 ? 5 DA X N3 1 ATOM 103 C C4 . DA A 1 5 ? 4.897 -32.920 -3.213 1.00 46.92 ? 5 DA X C4 1 ATOM 104 P P . DG A 1 6 ? 10.015 -37.122 -3.949 1.00 59.71 ? 6 DG X P 1 ATOM 105 O OP1 . DG A 1 6 ? 11.311 -37.038 -3.201 1.00 60.27 ? 6 DG X OP1 1 ATOM 106 O OP2 . DG A 1 6 ? 9.759 -37.864 -5.203 1.00 58.69 ? 6 DG X OP2 1 ATOM 107 O "O5'" . DG A 1 6 ? 8.995 -37.797 -2.918 1.00 58.98 ? 6 DG X "O5'" 1 ATOM 108 C "C5'" . DG A 1 6 ? 9.264 -37.689 -1.557 1.00 58.85 ? 6 DG X "C5'" 1 ATOM 109 C "C4'" . DG A 1 6 ? 7.946 -37.971 -0.884 1.00 57.44 ? 6 DG X "C4'" 1 ATOM 110 O "O4'" . DG A 1 6 ? 6.926 -37.026 -1.279 1.00 52.99 ? 6 DG X "O4'" 1 ATOM 111 C "C3'" . DG A 1 6 ? 7.436 -39.322 -1.327 1.00 58.62 ? 6 DG X "C3'" 1 ATOM 112 O "O3'" . DG A 1 6 ? 7.021 -39.948 -0.130 1.00 61.57 ? 6 DG X "O3'" 1 ATOM 113 C "C2'" . DG A 1 6 ? 6.271 -39.000 -2.261 1.00 55.95 ? 6 DG X "C2'" 1 ATOM 114 C "C1'" . DG A 1 6 ? 5.788 -37.765 -1.519 1.00 52.20 ? 6 DG X "C1'" 1 ATOM 115 N N9 . DG A 1 6 ? 4.730 -37.029 -2.165 1.00 48.69 ? 6 DG X N9 1 ATOM 116 C C8 . DG A 1 6 ? 4.310 -37.132 -3.478 1.00 50.24 ? 6 DG X C8 1 ATOM 117 N N7 . DG A 1 6 ? 3.287 -36.347 -3.753 1.00 50.36 ? 6 DG X N7 1 ATOM 118 C C5 . DG A 1 6 ? 3.056 -35.706 -2.545 1.00 48.28 ? 6 DG X C5 1 ATOM 119 C C6 . DG A 1 6 ? 2.085 -34.779 -2.199 1.00 48.31 ? 6 DG X C6 1 ATOM 120 O O6 . DG A 1 6 ? 1.225 -34.284 -2.917 1.00 52.74 ? 6 DG X O6 1 ATOM 121 N N1 . DG A 1 6 ? 2.141 -34.384 -0.897 1.00 46.80 ? 6 DG X N1 1 ATOM 122 C C2 . DG A 1 6 ? 3.029 -34.803 0.051 1.00 46.91 ? 6 DG X C2 1 ATOM 123 N N2 . DG A 1 6 ? 2.911 -34.260 1.292 1.00 45.20 ? 6 DG X N2 1 ATOM 124 N N3 . DG A 1 6 ? 3.950 -35.697 -0.256 1.00 48.78 ? 6 DG X N3 1 ATOM 125 C C4 . DG A 1 6 ? 3.912 -36.113 -1.561 1.00 48.29 ? 6 DG X C4 1 ATOM 126 P P . DA A 1 7 ? 7.863 -41.205 0.380 1.00 61.39 ? 7 DA X P 1 ATOM 127 O OP1 . DA A 1 7 ? 9.229 -40.698 0.680 1.00 61.56 ? 7 DA X OP1 1 ATOM 128 O OP2 . DA A 1 7 ? 7.503 -42.232 -0.612 1.00 61.26 ? 7 DA X OP2 1 ATOM 129 O "O5'" . DA A 1 7 ? 7.050 -41.331 1.751 1.00 62.01 ? 7 DA X "O5'" 1 ATOM 130 C "C5'" . DA A 1 7 ? 7.314 -40.476 2.826 1.00 61.67 ? 7 DA X "C5'" 1 ATOM 131 C "C4'" . DA A 1 7 ? 6.011 -40.112 3.483 1.00 61.40 ? 7 DA X "C4'" 1 ATOM 132 O "O4'" . DA A 1 7 ? 5.182 -39.296 2.615 1.00 60.45 ? 7 DA X "O4'" 1 ATOM 133 C "C3'" . DA A 1 7 ? 5.096 -41.267 3.874 1.00 60.92 ? 7 DA X "C3'" 1 ATOM 134 O "O3'" . DA A 1 7 ? 4.458 -40.851 5.052 1.00 62.31 ? 7 DA X "O3'" 1 ATOM 135 C "C2'" . DA A 1 7 ? 4.031 -41.343 2.797 1.00 59.45 ? 7 DA X "C2'" 1 ATOM 136 C "C1'" . DA A 1 7 ? 3.869 -39.846 2.512 1.00 57.42 ? 7 DA X "C1'" 1 ATOM 137 N N9 . DA A 1 7 ? 3.288 -39.598 1.174 1.00 50.70 ? 7 DA X N9 1 ATOM 138 C C8 . DA A 1 7 ? 3.619 -40.241 0.036 1.00 49.39 ? 7 DA X C8 1 ATOM 139 N N7 . DA A 1 7 ? 2.928 -39.831 -0.984 1.00 48.64 ? 7 DA X N7 1 ATOM 140 C C5 . DA A 1 7 ? 2.097 -38.854 -0.497 1.00 46.84 ? 7 DA X C5 1 ATOM 141 C C6 . DA A 1 7 ? 1.119 -38.032 -1.085 1.00 44.69 ? 7 DA X C6 1 ATOM 142 N N6 . DA A 1 7 ? 0.806 -38.045 -2.375 1.00 46.74 ? 7 DA X N6 1 ATOM 143 N N1 . DA A 1 7 ? 0.470 -37.155 -0.309 1.00 43.86 ? 7 DA X N1 1 ATOM 144 C C2 . DA A 1 7 ? 0.770 -37.093 0.981 1.00 45.68 ? 7 DA X C2 1 ATOM 145 N N3 . DA A 1 7 ? 1.658 -37.827 1.650 1.00 47.39 ? 7 DA X N3 1 ATOM 146 C C4 . DA A 1 7 ? 2.302 -38.698 0.846 1.00 48.09 ? 7 DA X C4 1 HETATM 147 N N1 . BRU A 1 8 ? -0.620 -40.463 2.207 1.00 45.71 ? 8 BRU X N1 1 HETATM 148 C C2 . BRU A 1 8 ? -1.373 -39.835 1.260 1.00 43.36 ? 8 BRU X C2 1 HETATM 149 N N3 . BRU A 1 8 ? -1.231 -40.242 -0.003 1.00 41.83 ? 8 BRU X N3 1 HETATM 150 C C4 . BRU A 1 8 ? -0.396 -41.212 -0.463 1.00 44.38 ? 8 BRU X C4 1 HETATM 151 C C5 . BRU A 1 8 ? 0.395 -41.835 0.570 1.00 44.74 ? 8 BRU X C5 1 HETATM 152 C C6 . BRU A 1 8 ? 0.257 -41.444 1.836 1.00 44.65 ? 8 BRU X C6 1 HETATM 153 O O2 . BRU A 1 8 ? -2.177 -38.988 1.463 1.00 45.97 ? 8 BRU X O2 1 HETATM 154 O O4 . BRU A 1 8 ? -0.332 -41.500 -1.662 1.00 47.40 ? 8 BRU X O4 1 HETATM 155 BR BR . BRU A 1 8 ? 1.414 -43.156 -0.152 0.50 50.76 ? 8 BRU X BR 1 HETATM 156 C "C1'" . BRU A 1 8 ? -0.711 -40.102 3.655 1.00 51.82 ? 8 BRU X "C1'" 1 HETATM 157 C "C2'" . BRU A 1 8 ? -1.258 -41.214 4.569 1.00 53.95 ? 8 BRU X "C2'" 1 HETATM 158 C "C3'" . BRU A 1 8 ? -0.649 -40.879 5.930 1.00 55.61 ? 8 BRU X "C3'" 1 HETATM 159 C "C4'" . BRU A 1 8 ? 0.510 -39.945 5.594 1.00 56.78 ? 8 BRU X "C4'" 1 HETATM 160 O "O3'" . BRU A 1 8 ? -1.535 -40.131 6.712 1.00 57.00 ? 8 BRU X "O3'" 1 HETATM 161 O "O4'" . BRU A 1 8 ? 0.596 -39.919 4.147 1.00 53.97 ? 8 BRU X "O4'" 1 HETATM 162 C "C5'" . BRU A 1 8 ? 1.830 -40.335 6.231 1.00 60.17 ? 8 BRU X "C5'" 1 HETATM 163 O "O5'" . BRU A 1 8 ? 2.276 -41.611 5.732 1.00 61.72 ? 8 BRU X "O5'" 1 HETATM 164 P P . BRU A 1 8 ? 3.801 -41.950 5.967 1.00 62.58 ? 8 BRU X P 1 HETATM 165 O OP1 . BRU A 1 8 ? 4.015 -41.473 7.352 1.00 64.76 ? 8 BRU X OP1 1 HETATM 166 O OP2 . BRU A 1 8 ? 4.178 -43.286 5.438 1.00 62.45 ? 8 BRU X OP2 1 ATOM 167 P P . DG A 1 9 ? -2.501 -40.937 7.643 1.00 56.98 ? 9 DG X P 1 ATOM 168 O OP1 . DG A 1 9 ? -2.909 -40.130 8.838 1.00 59.41 ? 9 DG X OP1 1 ATOM 169 O OP2 . DG A 1 9 ? -1.724 -42.170 7.829 1.00 57.57 ? 9 DG X OP2 1 ATOM 170 O "O5'" . DG A 1 9 ? -3.770 -41.088 6.684 1.00 53.03 ? 9 DG X "O5'" 1 ATOM 171 C "C5'" . DG A 1 9 ? -4.596 -40.017 6.351 1.00 50.20 ? 9 DG X "C5'" 1 ATOM 172 C "C4'" . DG A 1 9 ? -5.630 -40.522 5.372 1.00 50.24 ? 9 DG X "C4'" 1 ATOM 173 O "O4'" . DG A 1 9 ? -4.993 -40.876 4.129 1.00 48.97 ? 9 DG X "O4'" 1 ATOM 174 C "C3'" . DG A 1 9 ? -6.295 -41.854 5.801 1.00 50.44 ? 9 DG X "C3'" 1 ATOM 175 O "O3'" . DG A 1 9 ? -7.615 -41.862 5.404 1.00 52.18 ? 9 DG X "O3'" 1 ATOM 176 C "C2'" . DG A 1 9 ? -5.466 -42.975 5.161 1.00 46.20 ? 9 DG X "C2'" 1 ATOM 177 C "C1'" . DG A 1 9 ? -5.299 -42.222 3.835 1.00 45.82 ? 9 DG X "C1'" 1 ATOM 178 N N9 . DG A 1 9 ? -4.285 -42.805 2.960 1.00 40.85 ? 9 DG X N9 1 ATOM 179 C C8 . DG A 1 9 ? -3.213 -43.617 3.263 1.00 39.93 ? 9 DG X C8 1 ATOM 180 N N7 . DG A 1 9 ? -2.512 -43.940 2.235 1.00 39.26 ? 9 DG X N7 1 ATOM 181 C C5 . DG A 1 9 ? -3.227 -43.334 1.193 1.00 38.51 ? 9 DG X C5 1 ATOM 182 C C6 . DG A 1 9 ? -3.024 -43.313 -0.204 1.00 38.63 ? 9 DG X C6 1 ATOM 183 O O6 . DG A 1 9 ? -2.123 -43.886 -0.781 1.00 40.21 ? 9 DG X O6 1 ATOM 184 N N1 . DG A 1 9 ? -3.983 -42.580 -0.914 1.00 36.80 ? 9 DG X N1 1 ATOM 185 C C2 . DG A 1 9 ? -5.030 -41.912 -0.327 1.00 33.71 ? 9 DG X C2 1 ATOM 186 N N2 . DG A 1 9 ? -5.890 -41.240 -1.037 1.00 31.30 ? 9 DG X N2 1 ATOM 187 N N3 . DG A 1 9 ? -5.205 -41.876 0.961 1.00 36.01 ? 9 DG X N3 1 ATOM 188 C C4 . DG A 1 9 ? -4.288 -42.628 1.640 1.00 38.09 ? 9 DG X C4 1 ATOM 189 P P . DG A 1 10 ? -8.715 -41.768 6.552 1.00 54.62 ? 10 DG X P 1 ATOM 190 O OP1 . DG A 1 10 ? -8.545 -40.436 7.173 1.00 56.72 ? 10 DG X OP1 1 ATOM 191 O OP2 . DG A 1 10 ? -8.526 -43.072 7.265 1.00 56.19 ? 10 DG X OP2 1 ATOM 192 O "O5'" . DG A 1 10 ? -10.050 -41.645 5.702 1.00 49.89 ? 10 DG X "O5'" 1 ATOM 193 C "C5'" . DG A 1 10 ? -10.232 -40.700 4.713 1.00 45.83 ? 10 DG X "C5'" 1 ATOM 194 C "C4'" . DG A 1 10 ? -10.918 -41.305 3.483 1.00 43.33 ? 10 DG X "C4'" 1 ATOM 195 O "O4'" . DG A 1 10 ? -9.940 -41.857 2.571 1.00 40.41 ? 10 DG X "O4'" 1 ATOM 196 C "C3'" . DG A 1 10 ? -11.909 -42.446 3.641 1.00 42.38 ? 10 DG X "C3'" 1 ATOM 197 O "O3'" . DG A 1 10 ? -12.865 -42.280 2.624 1.00 42.69 ? 10 DG X "O3'" 1 ATOM 198 C "C2'" . DG A 1 10 ? -11.078 -43.694 3.384 1.00 41.02 ? 10 DG X "C2'" 1 ATOM 199 C "C1'" . DG A 1 10 ? -10.179 -43.194 2.253 1.00 38.19 ? 10 DG X "C1'" 1 ATOM 200 N N9 . DG A 1 10 ? -8.881 -43.884 2.185 1.00 36.17 ? 10 DG X N9 1 ATOM 201 C C8 . DG A 1 10 ? -8.165 -44.456 3.216 1.00 32.25 ? 10 DG X C8 1 ATOM 202 N N7 . DG A 1 10 ? -7.045 -45.001 2.803 1.00 31.27 ? 10 DG X N7 1 ATOM 203 C C5 . DG A 1 10 ? -7.000 -44.825 1.431 1.00 33.92 ? 10 DG X C5 1 ATOM 204 C C6 . DG A 1 10 ? -6.049 -45.262 0.432 1.00 33.86 ? 10 DG X C6 1 ATOM 205 O O6 . DG A 1 10 ? -4.992 -45.875 0.558 1.00 32.49 ? 10 DG X O6 1 ATOM 206 N N1 . DG A 1 10 ? -6.413 -44.899 -0.835 1.00 32.93 ? 10 DG X N1 1 ATOM 207 C C2 . DG A 1 10 ? -7.567 -44.215 -1.117 1.00 35.39 ? 10 DG X C2 1 ATOM 208 N N2 . DG A 1 10 ? -7.755 -43.962 -2.433 1.00 38.48 ? 10 DG X N2 1 ATOM 209 N N3 . DG A 1 10 ? -8.482 -43.803 -0.222 1.00 35.19 ? 10 DG X N3 1 ATOM 210 C C4 . DG A 1 10 ? -8.135 -44.142 1.026 1.00 35.29 ? 10 DG X C4 1 ATOM 211 P P . DG A 1 11 ? -14.179 -43.162 2.537 1.00 43.61 ? 11 DG X P 1 ATOM 212 O OP1 . DG A 1 11 ? -15.066 -42.353 1.715 1.00 44.88 ? 11 DG X OP1 1 ATOM 213 O OP2 . DG A 1 11 ? -14.479 -43.717 3.889 1.00 42.01 ? 11 DG X OP2 1 ATOM 214 O "O5'" . DG A 1 11 ? -13.789 -44.372 1.580 1.00 41.80 ? 11 DG X "O5'" 1 ATOM 215 C "C5'" . DG A 1 11 ? -13.368 -44.183 0.202 1.00 38.39 ? 11 DG X "C5'" 1 ATOM 216 C "C4'" . DG A 1 11 ? -12.968 -45.538 -0.343 1.00 35.05 ? 11 DG X "C4'" 1 ATOM 217 O "O4'" . DG A 1 11 ? -11.905 -46.048 0.471 1.00 33.12 ? 11 DG X "O4'" 1 ATOM 218 C "C3'" . DG A 1 11 ? -14.004 -46.656 -0.236 1.00 34.86 ? 11 DG X "C3'" 1 ATOM 219 O "O3'" . DG A 1 11 ? -13.783 -47.505 -1.333 1.00 35.63 ? 11 DG X "O3'" 1 ATOM 220 C "C2'" . DG A 1 11 ? -13.647 -47.370 1.039 1.00 31.50 ? 11 DG X "C2'" 1 ATOM 221 C "C1'" . DG A 1 11 ? -12.129 -47.329 0.993 1.00 31.48 ? 11 DG X "C1'" 1 ATOM 222 N N9 . DG A 1 11 ? -11.440 -47.415 2.320 1.00 30.56 ? 11 DG X N9 1 ATOM 223 C C8 . DG A 1 11 ? -12.009 -47.197 3.534 1.00 29.97 ? 11 DG X C8 1 ATOM 224 N N7 . DG A 1 11 ? -11.204 -47.348 4.536 1.00 31.70 ? 11 DG X N7 1 ATOM 225 C C5 . DG A 1 11 ? -9.987 -47.643 3.971 1.00 32.30 ? 11 DG X C5 1 ATOM 226 C C6 . DG A 1 11 ? -8.716 -47.862 4.538 1.00 32.82 ? 11 DG X C6 1 ATOM 227 O O6 . DG A 1 11 ? -8.327 -47.904 5.706 1.00 37.38 ? 11 DG X O6 1 ATOM 228 N N1 . DG A 1 11 ? -7.744 -48.149 3.633 1.00 31.23 ? 11 DG X N1 1 ATOM 229 C C2 . DG A 1 11 ? -7.946 -48.149 2.271 1.00 33.03 ? 11 DG X C2 1 ATOM 230 N N2 . DG A 1 11 ? -6.862 -48.403 1.569 1.00 34.17 ? 11 DG X N2 1 ATOM 231 N N3 . DG A 1 11 ? -9.121 -47.966 1.674 1.00 32.53 ? 11 DG X N3 1 ATOM 232 C C4 . DG A 1 11 ? -10.127 -47.693 2.586 1.00 32.38 ? 11 DG X C4 1 ATOM 233 P P . DA A 1 12 ? -14.984 -48.136 -2.125 1.00 35.59 ? 12 DA X P 1 ATOM 234 O OP1 . DA A 1 12 ? -16.106 -47.231 -2.050 1.00 36.14 ? 12 DA X OP1 1 ATOM 235 O OP2 . DA A 1 12 ? -15.128 -49.481 -1.675 1.00 35.30 ? 12 DA X OP2 1 ATOM 236 O "O5'" . DA A 1 12 ? -14.238 -48.297 -3.491 1.00 37.96 ? 12 DA X "O5'" 1 ATOM 237 C "C5'" . DA A 1 12 ? -13.921 -47.185 -4.307 1.00 39.46 ? 12 DA X "C5'" 1 ATOM 238 C "C4'" . DA A 1 12 ? -12.887 -47.652 -5.336 1.00 38.47 ? 12 DA X "C4'" 1 ATOM 239 O "O4'" . DA A 1 12 ? -11.669 -48.008 -4.663 1.00 35.66 ? 12 DA X "O4'" 1 ATOM 240 C "C3'" . DA A 1 12 ? -13.226 -48.839 -6.209 1.00 39.31 ? 12 DA X "C3'" 1 ATOM 241 O "O3'" . DA A 1 12 ? -12.539 -48.530 -7.381 1.00 45.38 ? 12 DA X "O3'" 1 ATOM 242 C "C2'" . DA A 1 12 ? -12.510 -50.000 -5.559 1.00 35.45 ? 12 DA X "C2'" 1 ATOM 243 C "C1'" . DA A 1 12 ? -11.249 -49.285 -5.033 1.00 35.15 ? 12 DA X "C1'" 1 ATOM 244 N N9 . DA A 1 12 ? -10.662 -49.875 -3.797 1.00 32.29 ? 12 DA X N9 1 ATOM 245 C C8 . DA A 1 12 ? -11.044 -49.673 -2.530 1.00 29.14 ? 12 DA X C8 1 ATOM 246 N N7 . DA A 1 12 ? -10.338 -50.368 -1.699 1.00 27.94 ? 12 DA X N7 1 ATOM 247 C C5 . DA A 1 12 ? -9.400 -51.049 -2.399 1.00 27.55 ? 12 DA X C5 1 ATOM 248 C C6 . DA A 1 12 ? -8.339 -51.909 -2.095 1.00 28.98 ? 12 DA X C6 1 ATOM 249 N N6 . DA A 1 12 ? -7.955 -52.308 -0.881 1.00 31.92 ? 12 DA X N6 1 ATOM 250 N N1 . DA A 1 12 ? -7.605 -52.408 -3.106 1.00 30.66 ? 12 DA X N1 1 ATOM 251 C C2 . DA A 1 12 ? -7.947 -52.017 -4.350 1.00 30.86 ? 12 DA X C2 1 ATOM 252 N N3 . DA A 1 12 ? -8.898 -51.216 -4.729 1.00 28.81 ? 12 DA X N3 1 ATOM 253 C C4 . DA A 1 12 ? -9.584 -50.752 -3.720 1.00 29.76 ? 12 DA X C4 1 ATOM 254 P P . DG A 1 13 ? -13.259 -48.227 -8.824 1.00 50.88 ? 13 DG X P 1 ATOM 255 O OP1 . DG A 1 13 ? -12.132 -48.399 -9.739 1.00 51.48 ? 13 DG X OP1 1 ATOM 256 O OP2 . DG A 1 13 ? -14.020 -47.021 -8.477 1.00 50.22 ? 13 DG X OP2 1 ATOM 257 O "O5'" . DG A 1 13 ? -14.286 -49.464 -8.938 1.00 51.49 ? 13 DG X "O5'" 1 HETATM 258 MG MG . MG B 2 . ? 7.443 -28.937 -18.407 1.00 55.18 ? 51 MG X MG 1 HETATM 259 O O . HOH C 3 . ? -6.461 -31.854 -21.709 1.00 37.13 ? 52 HOH X O 1 HETATM 260 O O . HOH C 3 . ? 8.146 -29.117 -4.249 1.00 38.58 ? 53 HOH X O 1 HETATM 261 O O . HOH C 3 . ? -4.443 -37.626 -14.788 1.00 31.41 ? 54 HOH X O 1 HETATM 262 O O . HOH C 3 . ? -14.148 -51.063 0.175 1.00 31.81 ? 55 HOH X O 1 HETATM 263 O O . HOH C 3 . ? 5.987 -25.255 -18.380 1.00 46.36 ? 56 HOH X O 1 HETATM 264 O O . HOH C 3 . ? -5.409 -53.847 -3.233 1.00 33.38 ? 57 HOH X O 1 HETATM 265 O O . HOH C 3 . ? 2.988 -25.693 -15.765 1.00 45.34 ? 58 HOH X O 1 HETATM 266 O O . HOH C 3 . ? -4.064 -47.931 2.221 1.00 32.16 ? 59 HOH X O 1 HETATM 267 O O . HOH C 3 . ? -1.067 -46.474 -0.305 1.00 42.44 ? 60 HOH X O 1 HETATM 268 O O . HOH C 3 . ? -10.317 -41.878 -1.234 1.00 41.65 ? 61 HOH X O 1 HETATM 269 O O . HOH C 3 . ? 1.394 -39.605 -4.871 1.00 46.06 ? 62 HOH X O 1 HETATM 270 O O . HOH C 3 . ? -5.252 -27.638 -27.306 1.00 51.10 ? 63 HOH X O 1 HETATM 271 O O . HOH C 3 . ? -1.094 -33.794 -10.593 1.00 45.29 ? 64 HOH X O 1 HETATM 272 O O . HOH C 3 . ? -2.202 -30.780 -26.404 1.00 44.22 ? 65 HOH X O 1 HETATM 273 O O . HOH C 3 . ? -4.973 -38.234 -11.683 1.00 44.98 ? 66 HOH X O 1 HETATM 274 O O . HOH C 3 . ? 3.226 -26.372 -11.232 1.00 53.23 ? 67 HOH X O 1 HETATM 275 O O . HOH C 3 . ? -12.065 -47.257 7.034 1.00 49.13 ? 68 HOH X O 1 HETATM 276 O O . HOH C 3 . ? -4.474 -54.361 -5.970 1.00 45.71 ? 69 HOH X O 1 HETATM 277 O O . HOH C 3 . ? 0.090 -29.433 -25.616 1.00 44.94 ? 70 HOH X O 1 HETATM 278 O O . HOH C 3 . ? 6.855 -30.558 -17.107 1.00 49.09 ? 71 HOH X O 1 HETATM 279 O O . HOH C 3 . ? 8.012 -27.332 -19.748 1.00 56.23 ? 72 HOH X O 1 HETATM 280 O O . HOH C 3 . ? 6.154 -27.502 -17.420 1.00 53.40 ? 73 HOH X O 1 HETATM 281 O O . HOH C 3 . ? 5.863 -29.693 -19.678 1.00 49.40 ? 74 HOH X O 1 # loop_ _atom_site_anisotrop.id _atom_site_anisotrop.type_symbol _atom_site_anisotrop.pdbx_label_atom_id _atom_site_anisotrop.pdbx_label_alt_id _atom_site_anisotrop.pdbx_label_comp_id _atom_site_anisotrop.pdbx_label_asym_id _atom_site_anisotrop.pdbx_label_seq_id _atom_site_anisotrop.pdbx_PDB_ins_code _atom_site_anisotrop.U[1][1] _atom_site_anisotrop.U[2][2] _atom_site_anisotrop.U[3][3] _atom_site_anisotrop.U[1][2] _atom_site_anisotrop.U[1][3] _atom_site_anisotrop.U[2][3] _atom_site_anisotrop.pdbx_auth_seq_id _atom_site_anisotrop.pdbx_auth_comp_id _atom_site_anisotrop.pdbx_auth_asym_id _atom_site_anisotrop.pdbx_auth_atom_id 1 O "O5'" . DG A 1 ? 0.5566 0.4708 0.4257 -0.0111 0.0606 0.0584 1 DG X "O5'" 2 C "C5'" . DG A 1 ? 0.5644 0.4917 0.4731 -0.0032 0.0263 0.0344 1 DG X "C5'" 3 C "C4'" . DG A 1 ? 0.5590 0.4897 0.4923 0.0218 0.0187 0.0727 1 DG X "C4'" 4 O "O4'" . DG A 1 ? 0.5736 0.4678 0.4837 0.0414 0.0379 0.0954 1 DG X "O4'" 5 C "C3'" . DG A 1 ? 0.5591 0.4887 0.5014 0.0168 0.0186 0.0557 1 DG X "C3'" 6 O "O3'" . DG A 1 ? 0.6079 0.4800 0.5341 -0.0099 -0.0126 0.0533 1 DG X "O3'" 7 C "C2'" . DG A 1 ? 0.5392 0.4590 0.4781 0.0353 0.0265 0.0189 1 DG X "C2'" 8 C "C1'" . DG A 1 ? 0.5001 0.4299 0.5014 0.0303 0.0068 0.0555 1 DG X "C1'" 9 N N9 . DG A 1 ? 0.4727 0.4034 0.4666 0.0566 -0.0020 0.0372 1 DG X N9 10 C C8 . DG A 1 ? 0.4663 0.4200 0.4613 0.0507 -0.0068 0.0390 1 DG X C8 11 N N7 . DG A 1 ? 0.5041 0.3749 0.4574 0.0428 -0.0068 0.0037 1 DG X N7 12 C C5 . DG A 1 ? 0.4657 0.3339 0.4544 0.0494 -0.0027 0.0344 1 DG X C5 13 C C6 . DG A 1 ? 0.4351 0.3679 0.4757 0.0449 0.0021 0.0377 1 DG X C6 14 O O6 . DG A 1 ? 0.4028 0.4435 0.5113 0.0221 -0.0625 0.0340 1 DG X O6 15 N N1 . DG A 1 ? 0.4736 0.4071 0.4700 0.0524 -0.0159 0.0612 1 DG X N1 16 C C2 . DG A 1 ? 0.4846 0.4090 0.4577 0.0282 -0.0074 0.0362 1 DG X C2 17 N N2 . DG A 1 ? 0.5356 0.4983 0.4782 -0.0425 0.0408 0.0443 1 DG X N2 18 N N3 . DG A 1 ? 0.4354 0.3692 0.4920 0.0230 0.0108 0.0417 1 DG X N3 19 C C4 . DG A 1 ? 0.4526 0.3894 0.4797 0.0482 0.0044 0.0267 1 DG X C4 20 P P . DG A 2 ? 0.6052 0.4934 0.5014 -0.0151 -0.0119 0.0683 2 DG X P 21 O OP1 . DG A 2 ? 0.6406 0.4667 0.5546 -0.0646 -0.0215 0.0670 2 DG X OP1 22 O OP2 . DG A 2 ? 0.5274 0.4844 0.3962 -0.0456 0.0210 0.1571 2 DG X OP2 23 O "O5'" . DG A 2 ? 0.5427 0.5083 0.4401 0.0083 -0.0081 0.0566 2 DG X "O5'" 24 C "C5'" . DG A 2 ? 0.4940 0.4460 0.4092 0.0452 -0.0483 0.0518 2 DG X "C5'" 25 C "C4'" . DG A 2 ? 0.4988 0.4383 0.4001 0.0476 -0.0197 0.0381 2 DG X "C4'" 26 O "O4'" . DG A 2 ? 0.5330 0.4381 0.3400 0.0513 0.0031 0.0313 2 DG X "O4'" 27 C "C3'" . DG A 2 ? 0.4998 0.4177 0.3842 0.0353 0.0136 0.0097 2 DG X "C3'" 28 O "O3'" . DG A 2 ? 0.4840 0.3874 0.3972 0.0472 -0.0273 0.0306 2 DG X "O3'" 29 C "C2'" . DG A 2 ? 0.4950 0.4353 0.3113 0.0280 0.0052 0.0460 2 DG X "C2'" 30 C "C1'" . DG A 2 ? 0.4953 0.4341 0.3206 0.0234 0.0197 0.0252 2 DG X "C1'" 31 N N9 . DG A 2 ? 0.4841 0.4076 0.3284 0.0019 0.0120 0.0441 2 DG X N9 32 C C8 . DG A 2 ? 0.5189 0.3912 0.3112 0.0417 -0.0038 0.0317 2 DG X C8 33 N N7 . DG A 2 ? 0.5072 0.3867 0.3490 0.0270 -0.0035 0.0060 2 DG X N7 34 C C5 . DG A 2 ? 0.4802 0.3932 0.3520 0.0439 -0.0060 -0.0013 2 DG X C5 35 C C6 . DG A 2 ? 0.4899 0.4283 0.3661 0.0362 -0.0122 -0.0110 2 DG X C6 36 O O6 . DG A 2 ? 0.5051 0.5293 0.3638 0.0952 -0.0406 0.0019 2 DG X O6 37 N N1 . DG A 2 ? 0.4831 0.4322 0.3661 0.0474 -0.0063 -0.0065 2 DG X N1 38 C C2 . DG A 2 ? 0.4749 0.3667 0.3684 0.0379 0.0109 -0.0527 2 DG X C2 39 N N2 . DG A 2 ? 0.4820 0.3711 0.4001 0.0493 0.0132 -0.0205 2 DG X N2 40 N N3 . DG A 2 ? 0.4620 0.3696 0.3398 0.0399 0.0200 -0.0313 2 DG X N3 41 C C4 . DG A 2 ? 0.4601 0.4067 0.3440 0.0390 0.0034 0.0110 2 DG X C4 42 P P . DA A 3 ? 0.5201 0.3880 0.3877 0.0399 -0.0445 0.0408 3 DA X P 43 O OP1 . DA A 3 ? 0.5577 0.4344 0.4083 0.0063 -0.0373 0.0227 3 DA X OP1 44 O OP2 . DA A 3 ? 0.5214 0.4243 0.3959 0.0428 -0.0264 0.0008 3 DA X OP2 45 O "O5'" . DA A 3 ? 0.4525 0.4194 0.3957 0.0553 -0.0548 0.0307 3 DA X "O5'" 46 C "C5'" . DA A 3 ? 0.4953 0.4117 0.3544 0.0340 -0.0278 -0.0109 3 DA X "C5'" 47 C "C4'" . DA A 3 ? 0.4996 0.4109 0.3645 0.0015 -0.0309 -0.0065 3 DA X "C4'" 48 O "O4'" . DA A 3 ? 0.5332 0.3773 0.3273 0.0082 -0.0196 -0.0160 3 DA X "O4'" 49 C "C3'" . DA A 3 ? 0.5492 0.3535 0.3389 0.0291 -0.0040 -0.0299 3 DA X "C3'" 50 O "O3'" . DA A 3 ? 0.5546 0.4003 0.3432 -0.0115 0.0183 0.0057 3 DA X "O3'" 51 C "C2'" . DA A 3 ? 0.4429 0.3556 0.2778 0.0194 0.0037 -0.0438 3 DA X "C2'" 52 C "C1'" . DA A 3 ? 0.4385 0.3524 0.3008 0.0410 -0.0142 -0.0472 3 DA X "C1'" 53 N N9 . DA A 3 ? 0.3898 0.3412 0.2714 0.0381 0.0065 -0.0227 3 DA X N9 54 C C8 . DA A 3 ? 0.3203 0.4171 0.2823 0.0204 0.0335 -0.0472 3 DA X C8 55 N N7 . DA A 3 ? 0.4222 0.4179 0.2952 -0.0031 0.0104 -0.0230 3 DA X N7 56 C C5 . DA A 3 ? 0.4120 0.3564 0.2640 0.0386 0.0019 -0.0174 3 DA X C5 57 C C6 . DA A 3 ? 0.4302 0.3283 0.2782 0.0482 0.0155 -0.0264 3 DA X C6 58 N N6 . DA A 3 ? 0.4578 0.3560 0.2538 0.0604 0.0339 -0.0186 3 DA X N6 59 N N1 . DA A 3 ? 0.4725 0.3605 0.2182 0.0706 0.0156 -0.0377 3 DA X N1 60 C C2 . DA A 3 ? 0.4225 0.3226 0.2743 0.0516 -0.0522 -0.0725 3 DA X C2 61 N N3 . DA A 3 ? 0.4478 0.3088 0.2171 0.0357 -0.0020 -0.0747 3 DA X N3 62 C C4 . DA A 3 ? 0.4065 0.2986 0.2602 0.0546 0.0051 -0.0408 3 DA X C4 63 BR BR . CBR A 4 ? 0.6609 0.7311 0.4498 -0.0507 -0.0606 -0.1237 4 CBR X BR 64 P P . CBR A 4 ? 0.6132 0.4727 0.3580 -0.0020 0.0126 -0.0485 4 CBR X P 65 O OP1 . CBR A 4 ? 0.6763 0.5351 0.4029 0.0020 0.0526 -0.0241 4 CBR X OP1 66 O OP2 . CBR A 4 ? 0.6080 0.4987 0.3354 -0.0104 -0.0346 -0.0273 4 CBR X OP2 67 O "O5'" . CBR A 4 ? 0.6220 0.4497 0.3444 0.0082 -0.0317 -0.1225 4 CBR X "O5'" 68 N N1 . CBR A 4 ? 0.5266 0.4254 0.4864 -0.0252 -0.0209 -0.0157 4 CBR X N1 69 C C6 . CBR A 4 ? 0.4879 0.3863 0.4958 -0.0472 -0.0037 -0.0085 4 CBR X C6 70 C C2 . CBR A 4 ? 0.5343 0.4256 0.4847 -0.0303 0.0104 -0.0205 4 CBR X C2 71 O O2 . CBR A 4 ? 0.5885 0.4405 0.4685 -0.0019 -0.0157 -0.0373 4 CBR X O2 72 N N3 . CBR A 4 ? 0.4922 0.4366 0.4809 -0.0346 0.0151 0.0098 4 CBR X N3 73 C C4 . CBR A 4 ? 0.5088 0.4009 0.4778 -0.0269 0.0088 0.0019 4 CBR X C4 74 N N4 . CBR A 4 ? 0.5358 0.4694 0.4843 -0.0121 -0.0001 -0.0443 4 CBR X N4 75 C C5 . CBR A 4 ? 0.4969 0.3909 0.4766 -0.0364 -0.0111 -0.0199 4 CBR X C5 76 C "C2'" . CBR A 4 ? 0.5856 0.4809 0.4919 -0.0023 -0.0076 -0.0195 4 CBR X "C2'" 77 C "C5'" . CBR A 4 ? 0.6076 0.4288 0.3787 -0.0296 -0.0023 -0.0760 4 CBR X "C5'" 78 C "C4'" . CBR A 4 ? 0.5890 0.5157 0.4698 -0.0024 -0.0133 -0.0342 4 CBR X "C4'" 79 O "O4'" . CBR A 4 ? 0.5848 0.5175 0.4771 -0.0153 -0.0251 -0.0200 4 CBR X "O4'" 80 C "C1'" . CBR A 4 ? 0.5628 0.4845 0.4673 -0.0166 -0.0097 -0.0346 4 CBR X "C1'" 81 C "C3'" . CBR A 4 ? 0.6046 0.5067 0.4934 -0.0043 0.0017 -0.0195 4 CBR X "C3'" 82 O "O3'" . CBR A 4 ? 0.6148 0.5776 0.5614 0.0074 0.0292 -0.0305 4 CBR X "O3'" 83 P P . DA A 5 ? 0.6212 0.6019 0.6119 0.0231 0.0173 -0.0606 5 DA X P 84 O OP1 . DA A 5 ? 0.6294 0.6680 0.6243 0.0516 0.0207 -0.0460 5 DA X OP1 85 O OP2 . DA A 5 ? 0.6426 0.6085 0.5956 0.0142 0.0463 -0.0474 5 DA X OP2 86 O "O5'" . DA A 5 ? 0.6932 0.5908 0.6539 0.0443 -0.0031 -0.0186 5 DA X "O5'" 87 C "C5'" . DA A 5 ? 0.6831 0.6251 0.6931 0.0518 0.0364 -0.0240 5 DA X "C5'" 88 C "C4'" . DA A 5 ? 0.6772 0.6526 0.7185 0.0103 0.0094 0.0020 5 DA X "C4'" 89 O "O4'" . DA A 5 ? 0.6644 0.5971 0.7270 0.0087 -0.0015 -0.0461 5 DA X "O4'" 90 C "C3'" . DA A 5 ? 0.6909 0.6646 0.7554 -0.0027 0.0136 -0.0183 5 DA X "C3'" 91 O "O3'" . DA A 5 ? 0.6931 0.7090 0.7955 0.0023 0.0068 0.0107 5 DA X "O3'" 92 C "C2'" . DA A 5 ? 0.6912 0.6702 0.7427 -0.0087 0.0138 -0.0329 5 DA X "C2'" 93 C "C1'" . DA A 5 ? 0.6491 0.6264 0.7451 -0.0038 0.0065 -0.0137 5 DA X "C1'" 94 N N9 . DA A 5 ? 0.6245 0.5608 0.6724 -0.0425 -0.0012 -0.0311 5 DA X N9 95 C C8 . DA A 5 ? 0.6210 0.5133 0.6488 -0.0520 0.0116 -0.0242 5 DA X C8 96 N N7 . DA A 5 ? 0.6090 0.5221 0.6194 -0.0612 0.0091 -0.0008 5 DA X N7 97 C C5 . DA A 5 ? 0.5614 0.5214 0.6188 -0.0754 0.0215 0.0021 5 DA X C5 98 C C6 . DA A 5 ? 0.5191 0.4936 0.6013 -0.0905 0.0088 0.0107 5 DA X C6 99 N N6 . DA A 5 ? 0.5326 0.4810 0.6078 -0.0996 -0.0184 0.0205 5 DA X N6 100 N N1 . DA A 5 ? 0.5201 0.4864 0.5874 -0.0666 0.0307 0.0054 5 DA X N1 101 C C2 . DA A 5 ? 0.5423 0.5296 0.6195 -0.0604 0.0057 0.0138 5 DA X C2 102 N N3 . DA A 5 ? 0.5945 0.5824 0.6260 -0.0502 0.0260 -0.0120 5 DA X N3 103 C C4 . DA A 5 ? 0.5803 0.5684 0.6337 -0.0551 0.0120 0.0023 5 DA X C4 104 P P . DG A 6 ? 0.7408 0.7154 0.8122 0.0054 0.0212 0.0458 6 DG X P 105 O OP1 . DG A 6 ? 0.7525 0.7143 0.8230 -0.0115 0.0093 0.0716 6 DG X OP1 106 O OP2 . DG A 6 ? 0.7490 0.7061 0.7747 0.0026 0.0507 0.0575 6 DG X OP2 107 O "O5'" . DG A 6 ? 0.7427 0.7187 0.7794 0.0109 0.0219 0.0247 6 DG X "O5'" 108 C "C5'" . DG A 6 ? 0.7531 0.7057 0.7770 0.0083 0.0207 0.0416 6 DG X "C5'" 109 C "C4'" . DG A 6 ? 0.7295 0.6686 0.7841 0.0020 -0.0043 0.0494 6 DG X "C4'" 110 O "O4'" . DG A 6 ? 0.7001 0.6011 0.7119 -0.0419 0.0046 0.0614 6 DG X "O4'" 111 C "C3'" . DG A 6 ? 0.7601 0.6839 0.7829 -0.0034 -0.0195 0.0379 6 DG X "C3'" 112 O "O3'" . DG A 6 ? 0.8117 0.7213 0.8062 0.0239 -0.0096 0.0737 6 DG X "O3'" 113 C "C2'" . DG A 6 ? 0.7409 0.6510 0.7338 0.0010 0.0087 0.0348 6 DG X "C2'" 114 C "C1'" . DG A 6 ? 0.6842 0.6129 0.6862 -0.0337 0.0035 0.0559 6 DG X "C1'" 115 N N9 . DG A 6 ? 0.6585 0.5310 0.6603 -0.0685 0.0167 0.0489 6 DG X N9 116 C C8 . DG A 6 ? 0.6619 0.5668 0.6801 -0.0634 -0.0057 0.0315 6 DG X C8 117 N N7 . DG A 6 ? 0.6754 0.5591 0.6789 -0.0527 0.0074 0.0233 6 DG X N7 118 C C5 . DG A 6 ? 0.6306 0.5446 0.6591 -0.0644 0.0183 0.0483 6 DG X C5 119 C C6 . DG A 6 ? 0.6420 0.5268 0.6666 -0.0741 0.0242 0.0291 6 DG X C6 120 O O6 . DG A 6 ? 0.6350 0.6176 0.7509 -0.0842 -0.0187 0.0262 6 DG X O6 121 N N1 . DG A 6 ? 0.6079 0.5183 0.6519 -0.0742 0.0115 0.0568 6 DG X N1 122 C C2 . DG A 6 ? 0.6146 0.5299 0.6376 -0.0612 0.0187 0.0494 6 DG X C2 123 N N2 . DG A 6 ? 0.5982 0.5152 0.6037 -0.0876 0.0335 0.0838 6 DG X N2 124 N N3 . DG A 6 ? 0.6297 0.5619 0.6617 -0.0494 0.0215 0.0309 6 DG X N3 125 C C4 . DG A 6 ? 0.6188 0.5640 0.6516 -0.0777 0.0153 0.0394 6 DG X C4 126 P P . DA A 7 ? 0.8024 0.7042 0.8258 0.0168 -0.0130 0.0727 7 DA X P 127 O OP1 . DA A 7 ? 0.7633 0.7243 0.8510 0.0571 -0.0038 0.0878 7 DA X OP1 128 O OP2 . DA A 7 ? 0.8056 0.6892 0.8324 0.0546 0.0071 0.0500 7 DA X OP2 129 O "O5'" . DA A 7 ? 0.8148 0.7282 0.8127 0.0065 -0.0203 0.0520 7 DA X "O5'" 130 C "C5'" . DA A 7 ? 0.7896 0.7369 0.8166 0.0015 -0.0142 0.0405 7 DA X "C5'" 131 C "C4'" . DA A 7 ? 0.7807 0.7637 0.7883 -0.0129 -0.0194 0.0456 7 DA X "C4'" 132 O "O4'" . DA A 7 ? 0.7564 0.7674 0.7728 -0.0443 -0.0430 0.0353 7 DA X "O4'" 133 C "C3'" . DA A 7 ? 0.7812 0.7533 0.7799 -0.0168 -0.0351 0.0251 7 DA X "C3'" 134 O "O3'" . DA A 7 ? 0.7696 0.8060 0.7917 -0.0331 -0.0143 0.0280 7 DA X "O3'" 135 C "C2'" . DA A 7 ? 0.7756 0.7219 0.7611 -0.0136 -0.0271 0.0331 7 DA X "C2'" 136 C "C1'" . DA A 7 ? 0.7398 0.7164 0.7253 -0.0259 -0.0308 0.0324 7 DA X "C1'" 137 N N9 . DA A 7 ? 0.6323 0.5871 0.7066 -0.0531 -0.0054 0.0122 7 DA X N9 138 C C8 . DA A 7 ? 0.6244 0.5815 0.6706 -0.0684 -0.0057 0.0340 7 DA X C8 139 N N7 . DA A 7 ? 0.6139 0.5561 0.6777 -0.0631 -0.0051 0.0131 7 DA X N7 140 C C5 . DA A 7 ? 0.5736 0.5534 0.6524 -0.0870 0.0132 0.0222 7 DA X C5 141 C C6 . DA A 7 ? 0.5660 0.5076 0.6241 -0.1142 0.0256 0.0373 7 DA X C6 142 N N6 . DA A 7 ? 0.5817 0.5535 0.6405 -0.1321 -0.0087 0.0065 7 DA X N6 143 N N1 . DA A 7 ? 0.5648 0.4841 0.6173 -0.1103 0.0309 0.0584 7 DA X N1 144 C C2 . DA A 7 ? 0.5798 0.5211 0.6345 -0.0983 -0.0049 0.0320 7 DA X C2 145 N N3 . DA A 7 ? 0.5525 0.5560 0.6920 -0.0754 -0.0054 0.0231 7 DA X N3 146 C C4 . DA A 7 ? 0.5936 0.5755 0.6580 -0.0816 -0.0049 0.0148 7 DA X C4 147 N N1 . BRU A 8 ? 0.5490 0.5405 0.6469 -0.0711 -0.0229 -0.0006 8 BRU X N1 148 C C2 . BRU A 8 ? 0.5640 0.4923 0.5910 -0.0852 0.0073 -0.0003 8 BRU X C2 149 N N3 . BRU A 8 ? 0.5225 0.4998 0.5669 -0.0847 0.0342 0.0434 8 BRU X N3 150 C C4 . BRU A 8 ? 0.5658 0.5134 0.6069 -0.0593 0.0157 0.0252 8 BRU X C4 151 C C5 . BRU A 8 ? 0.5368 0.5605 0.6024 -0.0687 0.0015 0.0091 8 BRU X C5 152 C C6 . BRU A 8 ? 0.5355 0.5554 0.6055 -0.0806 -0.0074 0.0000 8 BRU X C6 153 O O2 . BRU A 8 ? 0.5786 0.5565 0.6114 -0.0445 -0.0027 0.0098 8 BRU X O2 154 O O4 . BRU A 8 ? 0.6206 0.5519 0.6281 -0.0467 0.0340 -0.0132 8 BRU X O4 155 BR BR . BRU A 8 ? 0.7052 0.5651 0.6580 -0.0644 0.0046 -0.0164 8 BRU X BR 156 C "C1'" . BRU A 8 ? 0.6640 0.6476 0.6571 -0.0483 -0.0063 -0.0105 8 BRU X "C1'" 157 C "C2'" . BRU A 8 ? 0.6975 0.6365 0.7158 -0.0653 -0.0195 -0.0003 8 BRU X "C2'" 158 C "C3'" . BRU A 8 ? 0.7345 0.6685 0.7096 -0.0423 -0.0185 -0.0087 8 BRU X "C3'" 159 C "C4'" . BRU A 8 ? 0.7379 0.6986 0.7207 -0.0504 0.0017 -0.0076 8 BRU X "C4'" 160 O "O3'" . BRU A 8 ? 0.7538 0.6916 0.7200 -0.0485 -0.0043 -0.0249 8 BRU X "O3'" 161 O "O4'" . BRU A 8 ? 0.6708 0.6608 0.7186 -0.0807 -0.0097 -0.0017 8 BRU X "O4'" 162 C "C5'" . BRU A 8 ? 0.7513 0.7534 0.7813 -0.0362 -0.0060 0.0200 8 BRU X "C5'" 163 O "O5'" . BRU A 8 ? 0.7858 0.7791 0.7799 -0.0216 -0.0089 0.0059 8 BRU X "O5'" 164 P P . BRU A 8 ? 0.7799 0.8128 0.7848 -0.0351 -0.0208 0.0339 8 BRU X P 165 O OP1 . BRU A 8 ? 0.8194 0.8436 0.7972 -0.0527 -0.0266 0.0163 8 BRU X OP1 166 O OP2 . BRU A 8 ? 0.7706 0.8112 0.7906 -0.0432 -0.0170 0.0282 8 BRU X OP2 167 P P . DG A 9 ? 0.7933 0.6522 0.7193 -0.0535 -0.0193 -0.0197 9 DG X P 168 O OP1 . DG A 9 ? 0.8170 0.6767 0.7634 -0.0485 -0.0015 -0.0482 9 DG X OP1 169 O OP2 . DG A 9 ? 0.7908 0.6858 0.7107 -0.0199 -0.0131 -0.0454 9 DG X OP2 170 O "O5'" . DG A 9 ? 0.7472 0.5463 0.7213 -0.0656 -0.0023 -0.0428 9 DG X "O5'" 171 C "C5'" . DG A 9 ? 0.6971 0.5435 0.6667 -0.0756 0.0186 -0.0443 9 DG X "C5'" 172 C "C4'" . DG A 9 ? 0.6829 0.5981 0.6276 -0.0410 0.0217 -0.0285 9 DG X "C4'" 173 O "O4'" . DG A 9 ? 0.6777 0.5596 0.6231 -0.0480 0.0275 -0.0118 9 DG X "O4'" 174 C "C3'" . DG A 9 ? 0.6663 0.5945 0.6556 -0.0427 0.0132 -0.0445 9 DG X "C3'" 175 O "O3'" . DG A 9 ? 0.6820 0.6455 0.6547 -0.0472 -0.0098 -0.0658 9 DG X "O3'" 176 C "C2'" . DG A 9 ? 0.6409 0.5717 0.5424 -0.0922 0.0076 -0.0625 9 DG X "C2'" 177 C "C1'" . DG A 9 ? 0.6032 0.5656 0.5719 -0.0487 0.0167 -0.0322 9 DG X "C1'" 178 N N9 . DG A 9 ? 0.5445 0.5016 0.5059 -0.0755 -0.0220 -0.0148 9 DG X N9 179 C C8 . DG A 9 ? 0.5485 0.4694 0.4992 -0.0639 0.0060 -0.0544 9 DG X C8 180 N N7 . DG A 9 ? 0.5683 0.4357 0.4873 -0.0533 -0.0003 -0.0491 9 DG X N7 181 C C5 . DG A 9 ? 0.5104 0.4478 0.5046 -0.0662 0.0020 -0.0340 9 DG X C5 182 C C6 . DG A 9 ? 0.5062 0.4591 0.5022 -0.0483 0.0107 -0.0137 9 DG X C6 183 O O6 . DG A 9 ? 0.4954 0.5464 0.4859 -0.0522 0.0253 -0.0183 9 DG X O6 184 N N1 . DG A 9 ? 0.4853 0.4425 0.4701 -0.0754 0.0120 -0.0248 9 DG X N1 185 C C2 . DG A 9 ? 0.4313 0.3847 0.4647 -0.0904 -0.0071 0.0149 9 DG X C2 186 N N2 . DG A 9 ? 0.4412 0.3824 0.3653 -0.1000 -0.0092 -0.0103 9 DG X N2 187 N N3 . DG A 9 ? 0.4653 0.4229 0.4797 -0.1168 0.0162 0.0010 9 DG X N3 188 C C4 . DG A 9 ? 0.4807 0.4637 0.5027 -0.0762 -0.0031 -0.0296 9 DG X C4 189 P P . DG A 10 ? 0.7028 0.6971 0.6753 -0.0597 0.0153 -0.0326 10 DG X P 190 O OP1 . DG A 10 ? 0.7711 0.6984 0.6855 -0.0012 0.0288 -0.0502 10 DG X OP1 191 O OP2 . DG A 10 ? 0.7049 0.7368 0.6931 -0.0251 0.0230 0.0034 10 DG X OP2 192 O "O5'" . DG A 10 ? 0.6609 0.6085 0.6259 -0.0130 0.0571 -0.0120 10 DG X "O5'" 193 C "C5'" . DG A 10 ? 0.5836 0.5624 0.5952 -0.0401 0.0573 -0.0344 10 DG X "C5'" 194 C "C4'" . DG A 10 ? 0.5778 0.5043 0.5641 -0.0120 0.0577 -0.0073 10 DG X "C4'" 195 O "O4'" . DG A 10 ? 0.5791 0.4263 0.5296 -0.0227 0.0430 0.0073 10 DG X "O4'" 196 C "C3'" . DG A 10 ? 0.5714 0.5020 0.5367 -0.0052 0.0483 -0.0187 10 DG X "C3'" 197 O "O3'" . DG A 10 ? 0.6060 0.5192 0.4965 0.0098 0.0546 -0.0463 10 DG X "O3'" 198 C "C2'" . DG A 10 ? 0.5798 0.4694 0.5092 -0.0264 0.0430 -0.0297 10 DG X "C2'" 199 C "C1'" . DG A 10 ? 0.5155 0.4401 0.4952 -0.0082 0.0182 -0.0297 10 DG X "C1'" 200 N N9 . DG A 10 ? 0.5130 0.4147 0.4463 -0.0125 -0.0154 -0.0392 10 DG X N9 201 C C8 . DG A 10 ? 0.4957 0.3193 0.4101 -0.0348 -0.0157 -0.0584 10 DG X C8 202 N N7 . DG A 10 ? 0.4670 0.3157 0.4052 -0.0141 -0.0533 -0.0159 10 DG X N7 203 C C5 . DG A 10 ? 0.4532 0.4157 0.4197 -0.0291 0.0138 -0.0344 10 DG X C5 204 C C6 . DG A 10 ? 0.4417 0.4114 0.4331 -0.0313 0.0193 -0.0294 10 DG X C6 205 O O6 . DG A 10 ? 0.4125 0.4168 0.4051 -0.0441 0.0531 -0.0715 10 DG X O6 206 N N1 . DG A 10 ? 0.4428 0.3764 0.4317 -0.0461 0.0216 -0.0212 10 DG X N1 207 C C2 . DG A 10 ? 0.4556 0.4175 0.4713 -0.0299 0.0223 -0.0116 10 DG X C2 208 N N2 . DG A 10 ? 0.5232 0.4629 0.4757 -0.0082 0.0271 0.0099 10 DG X N2 210 C C4 . DG A 10 ? 0.4885 0.3977 0.4543 -0.0151 -0.0003 -0.0137 10 DG X C4 211 P P . DG A 11 ? 0.6090 0.5156 0.5322 0.0115 0.0406 -0.0538 11 DG X P 212 O OP1 . DG A 11 ? 0.6380 0.5223 0.5447 0.0179 0.0219 -0.0518 11 DG X OP1 213 O OP2 . DG A 11 ? 0.5851 0.5006 0.5104 0.0010 0.0346 -0.0803 11 DG X OP2 214 O "O5'" . DG A 11 ? 0.6207 0.4900 0.4772 -0.0136 0.0359 -0.0252 11 DG X "O5'" 215 C "C5'" . DG A 11 ? 0.5532 0.4380 0.4672 -0.0244 0.0168 -0.0190 11 DG X "C5'" 216 C "C4'" . DG A 11 ? 0.4668 0.4439 0.4208 -0.0240 0.0096 -0.0148 11 DG X "C4'" 217 O "O4'" . DG A 11 ? 0.4980 0.4176 0.3424 -0.0423 0.0147 -0.0049 11 DG X "O4'" 218 C "C3'" . DG A 11 ? 0.5022 0.4084 0.4136 -0.0175 -0.0021 0.0021 11 DG X "C3'" 219 O "O3'" . DG A 11 ? 0.5160 0.4142 0.4233 -0.0377 -0.0324 -0.0120 11 DG X "O3'" 220 C "C2'" . DG A 11 ? 0.4557 0.3741 0.3667 -0.0322 0.0043 -0.0320 11 DG X "C2'" 221 C "C1'" . DG A 11 ? 0.4563 0.3964 0.3433 -0.0518 0.0164 -0.0248 11 DG X "C1'" 222 N N9 . DG A 11 ? 0.4177 0.3817 0.3615 -0.0511 0.0111 0.0015 11 DG X N9 223 C C8 . DG A 11 ? 0.4099 0.3740 0.3545 -0.0608 0.0127 0.0046 11 DG X C8 224 N N7 . DG A 11 ? 0.4322 0.4020 0.3699 -0.0588 0.0027 -0.0221 11 DG X N7 225 C C5 . DG A 11 ? 0.4630 0.3936 0.3705 -0.0408 0.0269 -0.0068 11 DG X C5 226 C C6 . DG A 11 ? 0.4695 0.3810 0.3963 -0.0634 0.0062 -0.0113 11 DG X C6 227 O O6 . DG A 11 ? 0.5248 0.4763 0.4189 -0.0820 -0.0210 -0.0649 11 DG X O6 228 N N1 . DG A 11 ? 0.4370 0.3627 0.3866 -0.0886 -0.0165 -0.0326 11 DG X N1 229 C C2 . DG A 11 ? 0.4623 0.4072 0.3853 -0.0175 -0.0021 -0.0135 11 DG X C2 230 N N2 . DG A 11 ? 0.4503 0.4684 0.3794 -0.0329 -0.0057 -0.0052 11 DG X N2 231 N N3 . DG A 11 ? 0.4768 0.4098 0.3492 -0.0197 -0.0010 0.0065 11 DG X N3 232 C C4 . DG A 11 ? 0.4380 0.4140 0.3779 -0.0364 -0.0041 -0.0049 11 DG X C4 233 P P . DA A 12 ? 0.5070 0.4416 0.4036 -0.0304 -0.0566 0.0010 12 DA X P 234 O OP1 . DA A 12 ? 0.4779 0.4422 0.4527 -0.0452 -0.0535 0.0318 12 DA X OP1 235 O OP2 . DA A 12 ? 0.4651 0.4387 0.4373 -0.0344 -0.0346 -0.0023 12 DA X OP2 236 O "O5'" . DA A 12 ? 0.5112 0.4931 0.4377 -0.0570 -0.0250 0.0030 12 DA X "O5'" 237 C "C5'" . DA A 12 ? 0.5511 0.5021 0.4459 -0.0381 -0.0151 0.0154 12 DA X "C5'" 238 C "C4'" . DA A 12 ? 0.5182 0.5166 0.4268 -0.0241 -0.0322 0.0296 12 DA X "C4'" 239 O "O4'" . DA A 12 ? 0.5332 0.4496 0.3718 -0.0274 -0.0276 0.0460 12 DA X "O4'" 240 C "C3'" . DA A 12 ? 0.5514 0.5281 0.4140 0.0119 -0.0480 0.0130 12 DA X "C3'" 241 O "O3'" . DA A 12 ? 0.6622 0.6309 0.4308 0.0043 -0.0359 0.0562 12 DA X "O3'" 242 C "C2'" . DA A 12 ? 0.5047 0.5362 0.3058 -0.0291 -0.0269 0.0296 12 DA X "C2'" 243 C "C1'" . DA A 12 ? 0.5123 0.4743 0.3489 -0.0161 -0.0388 0.0285 12 DA X "C1'" 244 N N9 . DA A 12 ? 0.4280 0.4686 0.3300 -0.0149 -0.0289 -0.0043 12 DA X N9 245 C C8 . DA A 12 ? 0.3956 0.4054 0.3060 -0.0310 -0.0439 -0.0255 12 DA X C8 246 N N7 . DA A 12 ? 0.3663 0.3978 0.2973 -0.0507 -0.0538 -0.0434 12 DA X N7 247 C C5 . DA A 12 ? 0.4041 0.3783 0.2640 -0.0612 -0.0284 -0.0222 12 DA X C5 248 C C6 . DA A 12 ? 0.4430 0.3634 0.2945 -0.0513 -0.0140 0.0119 12 DA X C6 249 N N6 . DA A 12 ? 0.4857 0.4550 0.2717 -0.0644 0.0060 0.0115 12 DA X N6 250 N N1 . DA A 12 ? 0.4881 0.4266 0.2501 -0.0439 -0.0021 0.0428 12 DA X N1 251 C C2 . DA A 12 ? 0.4627 0.4191 0.2907 -0.0071 -0.0549 0.0305 12 DA X C2 252 N N3 . DA A 12 ? 0.4187 0.4394 0.2363 -0.0166 -0.0458 0.0390 12 DA X N3 253 C C4 . DA A 12 ? 0.4350 0.4108 0.2849 -0.0289 -0.0417 0.0035 12 DA X C4 254 P P . DG A 13 ? 0.7961 0.7085 0.4285 0.0222 -0.0441 0.0923 13 DG X P 255 O OP1 . DG A 13 ? 0.8111 0.7016 0.4431 0.0031 -0.0160 0.0819 13 DG X OP1 256 O OP2 . DG A 13 ? 0.8233 0.6929 0.3918 0.0549 -0.0816 0.1394 13 DG X OP2 257 O "O5'" . DG A 13 ? 0.7917 0.7740 0.3903 -0.0062 -0.0746 -0.0040 13 DG X "O5'" 258 MG MG . MG B . ? 0.7474 0.7019 0.6472 -0.0296 -0.0065 0.0419 51 MG X MG 259 O O . HOH C . ? 0.6541 0.4300 0.3265 0.0434 0.0121 -0.0141 52 HOH X O 260 O O . HOH C . ? 0.6066 0.4951 0.3639 -0.0696 -0.0480 -0.0443 53 HOH X O 261 O O . HOH C . ? 0.5690 0.3033 0.3209 0.0909 0.0544 0.0161 54 HOH X O 262 O O . HOH C . ? 0.5667 0.3448 0.2970 -0.0299 0.0610 -0.0344 55 HOH X O 263 O O . HOH C . ? 0.6356 0.5290 0.5966 -0.0472 -0.0767 0.0156 56 HOH X O 264 O O . HOH C . ? 0.5607 0.3791 0.3284 -0.1198 0.1178 -0.0194 57 HOH X O 265 O O . HOH C . ? 0.7227 0.4427 0.5572 -0.0636 0.0256 -0.0615 58 HOH X O 266 O O . HOH C . ? 0.4516 0.5305 0.2396 0.0287 0.0255 0.1014 59 HOH X O 267 O O . HOH C . ? 0.6522 0.6278 0.3323 0.0688 -0.0051 0.0888 60 HOH X O 268 O O . HOH C . ? 0.6243 0.5039 0.4540 0.0003 0.1351 -0.0111 61 HOH X O 269 O O . HOH C . ? 0.6045 0.6139 0.5316 -0.0737 0.1005 0.0421 62 HOH X O 270 O O . HOH C . ? 0.6152 0.7554 0.5708 0.0239 0.0010 0.0115 63 HOH X O 271 O O . HOH C . ? 0.7584 0.6726 0.2896 -0.0035 -0.0216 0.1498 64 HOH X O 272 O O . HOH C . ? 0.7333 0.6361 0.3105 0.0294 -0.0266 0.0728 65 HOH X O 273 O O . HOH C . ? 0.5913 0.6051 0.5125 0.0141 -0.0353 -0.1318 66 HOH X O 274 O O . HOH C . ? 0.7688 0.6987 0.5547 -0.0807 -0.0176 -0.0190 67 HOH X O 275 O O . HOH C . ? 0.6763 0.6506 0.5394 -0.1058 0.0310 0.0035 68 HOH X O 276 O O . HOH C . ? 0.5765 0.6152 0.5448 -0.1992 0.0294 -0.0326 69 HOH X O 277 O O . HOH C . ? 0.6289 0.6015 0.4768 0.1422 0.0164 0.0581 70 HOH X O 278 O O . HOH C . ? 0.6464 0.6981 0.5205 -0.0328 0.0068 -0.0114 71 HOH X O 279 O O . HOH C . ? 0.7408 0.7143 0.6813 -0.0720 -0.0007 0.0452 72 HOH X O 280 O O . HOH C . ? 0.7161 0.7013 0.6112 -0.0511 -0.0298 0.0120 73 HOH X O 281 O O . HOH C . ? 0.6951 0.5697 0.6119 -0.0344 0.0254 0.0891 74 HOH X O #