0.018641 0.000000 0.000000 0.000000 0.014004 0.000000 0.000000 0.000000 0.014017 0.00000 0.00000 0.00000 Liu, J.-J. Dermatakis, A. Lukacs, C.M. Konzelmann, F. Chen, Y. Kammlott, U. Depinto, W. Yang, H. Yin, X. Chen, Y. Schutt, A. Simcox, M.E. Luk, K.-C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 53.645 71.406 71.342 C17 H15 F N4 O 310.326 5-[(2-AMINOETHYL)AMINO]-6-FLUORO-3-(1H-PYRROL-2-YL)BENZO[CD]INDOL-2(1H)-ONE non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 N C N 3 N C N 4 N N Y 5 N C Y 6 N C Y 7 N C Y 8 N C Y 9 N C Y 10 N C Y 11 N C Y 12 N N Y 13 N C N 14 N C N 15 N O N 16 N N Y 17 N C Y 18 N C Y 19 N C Y 20 N C N 21 N F Y 22 N C Y 23 N C N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N N N 40 S C N 41 N C N 42 N O N 43 N C N 44 N O N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N H N 52 N N N 53 S C N 54 N C N 55 N O N 56 N C N 57 N C N 58 N C N 59 N N N 60 N C N 61 N N N 62 N N N 63 N O N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N N N 80 S C N 81 N C N 82 N O N 83 N C N 84 N C N 85 N O N 86 N N N 87 N O N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N N N 97 S C N 98 N C N 99 N O N 100 N C N 101 N C N 102 N O N 103 N O N 104 N O N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N N N 113 R C N 114 N C N 115 N O N 116 N C N 117 N S N 118 N O N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N N N 127 S C N 128 N C N 129 N O N 130 N C N 131 N C N 132 N C N 133 N O N 134 N N N 135 N O N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N N N 147 S C N 148 N C N 149 N O N 150 N C N 151 N C N 152 N C N 153 N O N 154 N O N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N N N 166 N C N 167 N C N 168 N O N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N N N 176 S C N 177 N C N 178 N O N 179 N C Y 180 N C Y 181 N N Y 182 N C Y 183 N C Y 184 N N N 185 N O N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N O N 197 N H N 198 N H N 199 N N N 200 S C N 201 N C N 202 N O N 203 S C N 204 N C N 205 N C N 206 N C N 207 N O N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N N N 222 S C N 223 N C N 224 N O N 225 N C N 226 N C N 227 N C N 228 N C N 229 N O N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N N N 244 S C N 245 N C N 246 N O N 247 N C N 248 N C N 249 N C N 250 N C N 251 N N N 252 N O N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N N N 269 S C N 270 N C N 271 N O N 272 N C N 273 N C N 274 N S N 275 N C N 276 N O N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N N N 289 S C N 290 N C N 291 N O N 292 N C Y 293 N C Y 294 N C Y 295 N C Y 296 N C Y 297 N C Y 298 N C N 299 N O N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N N N 312 S C N 313 N C N 314 N O N 315 N C N 316 N C N 317 N C N 318 N O N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N N N 329 S C N 330 N C N 331 N O N 332 N C N 333 N O N 334 N O N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N N N 343 S C N 344 N C N 345 N O N 346 R C N 347 N O N 348 N C N 349 N O N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N N N 360 S C N 361 N C N 362 N O N 363 N C Y 364 N C Y 365 N C Y 366 N C Y 367 N N Y 368 N C Y 369 N C Y 370 N C Y 371 N C Y 372 N C N 373 N O N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N N N 387 S C N 388 N C N 389 N O N 390 N C Y 391 N C Y 392 N C Y 393 N C Y 394 N C Y 395 N C Y 396 N C N 397 N O N 398 N O N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N N N 411 S C N 412 N C N 413 N O N 414 N C N 415 N C N 416 N C N 417 N O N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing Y 12 N doub Y 13 N sing Y 14 N sing N 15 N sing Y 16 N sing Y 17 N doub Y 18 N doub Y 19 N sing Y 20 N sing N 21 N sing Y 22 N doub N 23 N sing Y 24 N sing N 25 N sing N 26 N sing N 27 N sing Y 28 N sing N 29 N doub N 30 N sing N 31 N sing N 32 N sing Y 33 N doub Y 34 N sing Y 35 N sing N 36 N sing Y 37 N doub N 38 N sing N 39 N sing Y 40 N sing Y 41 N doub N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N doub N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N doub N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N doub N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N doub N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N doub N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N doub N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N doub N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N doub N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N doub N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N doub N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N doub N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N doub N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N doub N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N doub N 177 N sing N 178 N sing N 179 N sing N 180 N sing Y 181 N sing Y 182 N doub Y 183 N doub N 184 N sing Y 185 N sing N 186 N sing Y 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N doub N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N doub N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N doub N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N doub N 285 N sing N 286 N sing N 287 N sing N 288 N sing Y 289 N doub Y 290 N sing Y 291 N sing N 292 N sing Y 293 N doub N 294 N sing Y 295 N doub N 296 N sing Y 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N doub N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N doub N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N doub N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N doub N 354 N sing N 355 N sing N 356 N sing N 357 N sing Y 358 N doub Y 359 N sing Y 360 N sing N 361 N sing Y 362 N doub Y 363 N sing Y 364 N sing N 365 N sing Y 366 N sing Y 367 N doub N 368 N sing Y 369 N doub N 370 N sing Y 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N doub N 382 N sing N 383 N sing N 384 N sing N 385 N sing Y 386 N doub Y 387 N sing Y 388 N sing N 389 N sing Y 390 N doub N 391 N sing Y 392 N doub N 393 N sing Y 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N doub N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing UK BIOORG.MED.CHEM. BMECEP 1200 0968-0896 13 2465 2468 10.1016/S0960-894X(03)00488-8 12852944 3,5,6-Trisubstituted Naphthostyrils as CDK2 Inhibitors 2003 10.2210/pdb1p2a/pdb pdb_00001p2a 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 110 1 CCD 2000-06-09 ADSC QUANTUM 4 SINGLE WAVELENGTH M x-ray 1 1.0 1.0 X8C NSLS 1.0 SYNCHROTRON NSLS BEAMLINE X8C 33976.488 Cell division protein kinase 2 2.7.1.- 1 man polymer 310.326 5-[(2-AMINOETHYL)AMINO]-6-FLUORO-3-(1H-PYRROL-2-YL)BENZO[CD]INDOL-2(1H)-ONE 1 syn non-polymer 18.015 water 65 nat water p33 protein kinase no no MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF EFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRL MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF EFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRL A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo sample CDK2 9606 Homo sapiens 10469 unidentified baculovirus 1 2.01 38.80 VAPOR DIFFUSION, HANGING DROP 9.0 PEG 3350, ammonium phosphate, bicine, pH 9.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K 277 chem_comp_atom chem_comp_bond database_2 struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 2003-07-15 1 1 2008-04-29 1 2 2011-07-13 1 3 2024-02-14 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In Complex With An Oxindole Inhibitor RCSB Y RCSB 2003-04-15 REL 5BN 5-[(2-AMINOETHYL)AMINO]-6-FLUORO-3-(1H-PYRROL-2-YL)BENZO[CD]INDOL-2(1H)-ONE HOH water LIG 301 2 5BN 5BN 301 A WAT 401 3 HOH HOH 401 A WAT 402 3 HOH HOH 402 A WAT 403 3 HOH HOH 403 A WAT 404 3 HOH HOH 404 A WAT 405 3 HOH HOH 405 A WAT 406 3 HOH HOH 406 A WAT 407 3 HOH HOH 407 A WAT 408 3 HOH HOH 408 A WAT 409 3 HOH HOH 409 A WAT 410 3 HOH HOH 410 A WAT 411 3 HOH HOH 411 A WAT 412 3 HOH HOH 412 A WAT 413 3 HOH HOH 413 A WAT 414 3 HOH HOH 414 A WAT 415 3 HOH HOH 415 A WAT 416 3 HOH HOH 416 A WAT 417 3 HOH HOH 417 A WAT 418 3 HOH HOH 418 A WAT 419 3 HOH HOH 419 A WAT 420 3 HOH HOH 420 A WAT 421 3 HOH HOH 421 A WAT 422 3 HOH HOH 422 A WAT 423 3 HOH HOH 423 A WAT 424 3 HOH HOH 424 A WAT 425 3 HOH HOH 425 A WAT 426 3 HOH HOH 426 A WAT 427 3 HOH HOH 427 A WAT 428 3 HOH HOH 428 A WAT 429 3 HOH HOH 429 A WAT 430 3 HOH HOH 430 A WAT 431 3 HOH HOH 431 A WAT 432 3 HOH HOH 432 A WAT 433 3 HOH HOH 433 A WAT 434 3 HOH HOH 434 A WAT 435 3 HOH HOH 435 A WAT 436 3 HOH HOH 436 A WAT 437 3 HOH HOH 437 A WAT 438 3 HOH HOH 438 A WAT 439 3 HOH HOH 439 A WAT 440 3 HOH HOH 440 A WAT 441 3 HOH HOH 441 A WAT 442 3 HOH HOH 442 A WAT 443 3 HOH HOH 443 A WAT 444 3 HOH HOH 444 A WAT 445 3 HOH HOH 445 A WAT 446 3 HOH HOH 446 A WAT 447 3 HOH HOH 447 A WAT 448 3 HOH HOH 448 A WAT 449 3 HOH HOH 449 A WAT 450 3 HOH HOH 450 A WAT 451 3 HOH HOH 451 A WAT 452 3 HOH HOH 452 A WAT 453 3 HOH HOH 453 A WAT 454 3 HOH HOH 454 A WAT 455 3 HOH HOH 455 A WAT 456 3 HOH HOH 456 A WAT 457 3 HOH HOH 457 A WAT 458 3 HOH HOH 458 A WAT 459 3 HOH HOH 459 A WAT 460 3 HOH HOH 460 A WAT 461 3 HOH HOH 461 A WAT 462 3 HOH HOH 462 A WAT 463 3 HOH HOH 463 A WAT 464 3 HOH HOH 464 A WAT 465 3 HOH HOH 465 A MET 1 n 1 MET 1 A GLU 2 n 2 GLU 2 A ASN 3 n 3 ASN 3 A PHE 4 n 4 PHE 4 A GLN 5 n 5 GLN 5 A LYS 6 n 6 LYS 6 A VAL 7 n 7 VAL 7 A GLU 8 n 8 GLU 8 A LYS 9 n 9 LYS 9 A ILE 10 n 10 ILE 10 A GLY 11 n 11 GLY 11 A GLU 12 n 12 GLU 12 A n 13 13 A n 14 14 A n 15 15 A GLY 16 n 16 GLY 16 A VAL 17 n 17 VAL 17 A VAL 18 n 18 VAL 18 A TYR 19 n 19 TYR 19 A LYS 20 n 20 LYS 20 A ALA 21 n 21 ALA 21 A ARG 22 n 22 ARG 22 A ASN 23 n 23 ASN 23 A LYS 24 n 24 LYS 24 A LEU 25 n 25 LEU 25 A THR 26 n 26 THR 26 A GLY 27 n 27 GLY 27 A GLU 28 n 28 GLU 28 A VAL 29 n 29 VAL 29 A VAL 30 n 30 VAL 30 A ALA 31 n 31 ALA 31 A LEU 32 n 32 LEU 32 A LYS 33 n 33 LYS 33 A LYS 34 n 34 LYS 34 A ILE 35 n 35 ILE 35 A ARG 36 n 36 ARG 36 A LEU 37 n 37 LEU 37 A n 38 38 A n 39 39 A n 40 40 A n 41 41 A n 42 42 A n 43 43 A n 44 44 A n 45 45 A n 46 46 A n 47 47 A ALA 48 n 48 ALA 48 A ILE 49 n 49 ILE 49 A ARG 50 n 50 ARG 50 A GLU 51 n 51 GLU 51 A ILE 52 n 52 ILE 52 A SER 53 n 53 SER 53 A LEU 54 n 54 LEU 54 A LEU 55 n 55 LEU 55 A LYS 56 n 56 LYS 56 A GLU 57 n 57 GLU 57 A LEU 58 n 58 LEU 58 A ASN 59 n 59 ASN 59 A HIS 60 n 60 HIS 60 A PRO 61 n 61 PRO 61 A ASN 62 n 62 ASN 62 A ILE 63 n 63 ILE 63 A VAL 64 n 64 VAL 64 A LYS 65 n 65 LYS 65 A LEU 66 n 66 LEU 66 A LEU 67 n 67 LEU 67 A ASP 68 n 68 ASP 68 A VAL 69 n 69 VAL 69 A ILE 70 n 70 ILE 70 A HIS 71 n 71 HIS 71 A THR 72 n 72 THR 72 A GLU 73 n 73 GLU 73 A ASN 74 n 74 ASN 74 A LYS 75 n 75 LYS 75 A LEU 76 n 76 LEU 76 A TYR 77 n 77 TYR 77 A LEU 78 n 78 LEU 78 A VAL 79 n 79 VAL 79 A PHE 80 n 80 PHE 80 A GLU 81 n 81 GLU 81 A PHE 82 n 82 PHE 82 A LEU 83 n 83 LEU 83 A HIS 84 n 84 HIS 84 A GLN 85 n 85 GLN 85 A ASP 86 n 86 ASP 86 A LEU 87 n 87 LEU 87 A LYS 88 n 88 LYS 88 A LYS 89 n 89 LYS 89 A PHE 90 n 90 PHE 90 A MET 91 n 91 MET 91 A ASP 92 n 92 ASP 92 A ALA 93 n 93 ALA 93 A SER 94 n 94 SER 94 A ALA 95 n 95 ALA 95 A LEU 96 n 96 LEU 96 A THR 97 n 97 THR 97 A GLY 98 n 98 GLY 98 A ILE 99 n 99 ILE 99 A PRO 100 n 100 PRO 100 A LEU 101 n 101 LEU 101 A PRO 102 n 102 PRO 102 A LEU 103 n 103 LEU 103 A ILE 104 n 104 ILE 104 A LYS 105 n 105 LYS 105 A SER 106 n 106 SER 106 A TYR 107 n 107 TYR 107 A LEU 108 n 108 LEU 108 A PHE 109 n 109 PHE 109 A GLN 110 n 110 GLN 110 A LEU 111 n 111 LEU 111 A LEU 112 n 112 LEU 112 A GLN 113 n 113 GLN 113 A GLY 114 n 114 GLY 114 A LEU 115 n 115 LEU 115 A ALA 116 n 116 ALA 116 A PHE 117 n 117 PHE 117 A CYS 118 n 118 CYS 118 A HIS 119 n 119 HIS 119 A SER 120 n 120 SER 120 A HIS 121 n 121 HIS 121 A ARG 122 n 122 ARG 122 A VAL 123 n 123 VAL 123 A LEU 124 n 124 LEU 124 A HIS 125 n 125 HIS 125 A ARG 126 n 126 ARG 126 A ASP 127 n 127 ASP 127 A LEU 128 n 128 LEU 128 A LYS 129 n 129 LYS 129 A PRO 130 n 130 PRO 130 A GLN 131 n 131 GLN 131 A ASN 132 n 132 ASN 132 A LEU 133 n 133 LEU 133 A LEU 134 n 134 LEU 134 A ILE 135 n 135 ILE 135 A ASN 136 n 136 ASN 136 A THR 137 n 137 THR 137 A GLU 138 n 138 GLU 138 A GLY 139 n 139 GLY 139 A ALA 140 n 140 ALA 140 A ILE 141 n 141 ILE 141 A LYS 142 n 142 LYS 142 A LEU 143 n 143 LEU 143 A ALA 144 n 144 ALA 144 A ASP 145 n 145 ASP 145 A PHE 146 n 146 PHE 146 A GLY 147 n 147 GLY 147 A LEU 148 n 148 LEU 148 A ALA 149 n 149 ALA 149 A n 150 150 A n 151 151 A n 152 152 A n 153 153 A n 154 154 A n 155 155 A n 156 156 A n 157 157 A n 158 158 A n 159 159 A n 160 160 A n 161 161 A n 162 162 A n 163 163 A VAL 164 n 164 VAL 164 A THR 165 n 165 THR 165 A LEU 166 n 166 LEU 166 A TRP 167 n 167 TRP 167 A TYR 168 n 168 TYR 168 A ARG 169 n 169 ARG 169 A ALA 170 n 170 ALA 170 A PRO 171 n 171 PRO 171 A GLU 172 n 172 GLU 172 A ILE 173 n 173 ILE 173 A LEU 174 n 174 LEU 174 A LEU 175 n 175 LEU 175 A GLY 176 n 176 GLY 176 A CYS 177 n 177 CYS 177 A LYS 178 n 178 LYS 178 A TYR 179 n 179 TYR 179 A TYR 180 n 180 TYR 180 A SER 181 n 181 SER 181 A THR 182 n 182 THR 182 A ALA 183 n 183 ALA 183 A VAL 184 n 184 VAL 184 A ASP 185 n 185 ASP 185 A ILE 186 n 186 ILE 186 A TRP 187 n 187 TRP 187 A SER 188 n 188 SER 188 A LEU 189 n 189 LEU 189 A GLY 190 n 190 GLY 190 A CYS 191 n 191 CYS 191 A ILE 192 n 192 ILE 192 A PHE 193 n 193 PHE 193 A ALA 194 n 194 ALA 194 A GLU 195 n 195 GLU 195 A MET 196 n 196 MET 196 A VAL 197 n 197 VAL 197 A THR 198 n 198 THR 198 A ARG 199 n 199 ARG 199 A ARG 200 n 200 ARG 200 A ALA 201 n 201 ALA 201 A LEU 202 n 202 LEU 202 A PHE 203 n 203 PHE 203 A PRO 204 n 204 PRO 204 A GLY 205 n 205 GLY 205 A ASP 206 n 206 ASP 206 A SER 207 n 207 SER 207 A GLU 208 n 208 GLU 208 A ILE 209 n 209 ILE 209 A ASP 210 n 210 ASP 210 A GLN 211 n 211 GLN 211 A LEU 212 n 212 LEU 212 A PHE 213 n 213 PHE 213 A ARG 214 n 214 ARG 214 A ILE 215 n 215 ILE 215 A PHE 216 n 216 PHE 216 A ARG 217 n 217 ARG 217 A THR 218 n 218 THR 218 A LEU 219 n 219 LEU 219 A GLY 220 n 220 GLY 220 A THR 221 n 221 THR 221 A PRO 222 n 222 PRO 222 A ASP 223 n 223 ASP 223 A GLU 224 n 224 GLU 224 A VAL 225 n 225 VAL 225 A VAL 226 n 226 VAL 226 A TRP 227 n 227 TRP 227 A PRO 228 n 228 PRO 228 A GLY 229 n 229 GLY 229 A VAL 230 n 230 VAL 230 A THR 231 n 231 THR 231 A SER 232 n 232 SER 232 A MET 233 n 233 MET 233 A PRO 234 n 234 PRO 234 A ASP 235 n 235 ASP 235 A TYR 236 n 236 TYR 236 A LYS 237 n 237 LYS 237 A PRO 238 n 238 PRO 238 A SER 239 n 239 SER 239 A PHE 240 n 240 PHE 240 A PRO 241 n 241 PRO 241 A LYS 242 n 242 LYS 242 A TRP 243 n 243 TRP 243 A ALA 244 n 244 ALA 244 A ARG 245 n 245 ARG 245 A GLN 246 n 246 GLN 246 A ASP 247 n 247 ASP 247 A PHE 248 n 248 PHE 248 A SER 249 n 249 SER 249 A LYS 250 n 250 LYS 250 A VAL 251 n 251 VAL 251 A VAL 252 n 252 VAL 252 A PRO 253 n 253 PRO 253 A PRO 254 n 254 PRO 254 A LEU 255 n 255 LEU 255 A ASP 256 n 256 ASP 256 A GLU 257 n 257 GLU 257 A ASP 258 n 258 ASP 258 A GLY 259 n 259 GLY 259 A ARG 260 n 260 ARG 260 A SER 261 n 261 SER 261 A LEU 262 n 262 LEU 262 A LEU 263 n 263 LEU 263 A SER 264 n 264 SER 264 A GLN 265 n 265 GLN 265 A MET 266 n 266 MET 266 A LEU 267 n 267 LEU 267 A HIS 268 n 268 HIS 268 A TYR 269 n 269 TYR 269 A ASP 270 n 270 ASP 270 A PRO 271 n 271 PRO 271 A ASN 272 n 272 ASN 272 A LYS 273 n 273 LYS 273 A ARG 274 n 274 ARG 274 A ILE 275 n 275 ILE 275 A SER 276 n 276 SER 276 A ALA 277 n 277 ALA 277 A LYS 278 n 278 LYS 278 A ALA 279 n 279 ALA 279 A ALA 280 n 280 ALA 280 A LEU 281 n 281 LEU 281 A ALA 282 n 282 ALA 282 A HIS 283 n 283 HIS 283 A PRO 284 n 284 PRO 284 A PHE 285 n 285 PHE 285 A PHE 286 n 286 PHE 286 A GLN 287 n 287 GLN 287 A ASP 288 n 288 ASP 288 A VAL 289 n 289 VAL 289 A THR 290 n 290 THR 290 A LYS 291 n 291 LYS 291 A PRO 292 n 292 PRO 292 A VAL 293 n 293 VAL 293 A PRO 294 n 294 PRO 294 A HIS 295 n 295 HIS 295 A LEU 296 n 296 LEU 296 A ARG 297 n 297 ARG 297 A LEU 298 n 298 LEU 298 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N GLU 8 A N GLU 8 A O LYS 20 A O LYS 20 A N TYR 19 A N TYR 19 A O LEU 32 A O LEU 32 A N ALA 31 A N ALA 31 A O PHE 80 A O PHE 80 A O TYR 77 A O TYR 77 A N ILE 70 A N ILE 70 A N GLN 85 A N GLN 85 A O ILE 135 A O ILE 135 A N LEU 134 A N LEU 134 A O LYS 142 A O LYS 142 1 A GLY 13 A GLY 13 1 Y 1 A THR 14 A THR 14 1 Y 1 A TYR 15 A TYR 15 1 Y 1 A ASP 38 A ASP 38 1 Y 1 A THR 39 A THR 39 1 Y 1 A GLU 40 A GLU 40 1 Y 1 A THR 41 A THR 41 1 Y 1 A GLU 42 A GLU 42 1 Y 1 A GLY 43 A GLY 43 1 Y 1 A VAL 44 A VAL 44 1 Y 1 A PRO 45 A PRO 45 1 Y 1 A SER 46 A SER 46 1 Y 1 A THR 47 A THR 47 1 Y 1 A ARG 150 A ARG 150 1 Y 1 A ALA 151 A ALA 151 1 Y 1 A PHE 152 A PHE 152 1 Y 1 A GLY 153 A GLY 153 1 Y 1 A VAL 154 A VAL 154 1 Y 1 A PRO 155 A PRO 155 1 Y 1 A VAL 156 A VAL 156 1 Y 1 A ARG 157 A ARG 157 1 Y 1 A THR 158 A THR 158 1 Y 1 A TYR 159 A TYR 159 1 Y 1 A THR 160 A THR 160 1 Y 1 A HIS 161 A HIS 161 1 Y 1 A GLU 162 A GLU 162 1 Y 1 A VAL 163 A VAL 163 1 Y 1 A LEU 25 -94.97 -68.16 1 A ARG 36 -126.72 -87.08 1 A ARG 50 -82.64 30.92 1 A GLU 73 54.68 -132.31 1 A ARG 126 77.95 -29.90 1 A TYR 179 -113.02 74.58 1 A ARG 199 74.02 34.77 32.6 0.28 0.206 2.5 20 1024 9514 9434 95.2 random 1 THROUGHOUT 0.0 0.0 MOLECULAR REPLACEMENT Engh & Huber 2.5 20 65 2277 23 0 2189 0.007 1.3 22.7 0.80 21.9 2.5 40 1P2A 9514 9514 0.071 1 2.3 93.8 2.5 2.59 802 0.111 81.7 data reduction DENZO data scaling SCALEPACK phasing AMoRE refinement CNX The structure of cyclin dependent kinase 2 (CKD2) with a trisubstituted naphthostyril inhibitor 1 N N 2 N N 3 N N The biological assembly is the monomer A ARG 50 A ARG 50 HELX_P A LEU 58 A LEU 58 1 1 9 A LEU 87 A LEU 87 HELX_P A SER 94 A SER 94 1 2 8 A PRO 100 A PRO 100 HELX_P A SER 120 A SER 120 1 3 21 A LYS 129 A LYS 129 HELX_P A GLN 131 A GLN 131 5 4 3 A ALA 170 A ALA 170 HELX_P A LEU 175 A LEU 175 1 5 6 A THR 182 A THR 182 HELX_P A ARG 199 A ARG 199 1 6 18 A SER 207 A SER 207 HELX_P A GLY 220 A GLY 220 1 7 14 A GLY 229 A GLY 229 HELX_P A MET 233 A MET 233 5 8 5 A ASP 247 A ASP 247 HELX_P A VAL 252 A VAL 252 1 9 6 A ASP 256 A ASP 256 HELX_P A LEU 267 A LEU 267 1 10 12 A SER 276 A SER 276 HELX_P A ALA 282 A ALA 282 1 11 7 A HIS 283 A HIS 283 HELX_P A GLN 287 A GLN 287 5 12 5 TRANSFERASE cyclin dependent kinase, naphthostyril oxindole, TRANSFERASE A PRO 253 A PRO 253 1 A PRO 254 A PRO 254 0.06 CDK2_HUMAN UNP 1 1 P24941 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF EFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRL 1 298 1P2A 1 298 P24941 A 1 1 298 5 3 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A PHE 4 A PHE 4 A GLY 11 A GLY 11 A VAL 17 A VAL 17 A ASN 23 A ASN 23 A VAL 29 A VAL 29 A ILE 35 A ILE 35 A LYS 75 A LYS 75 A GLU 81 A GLU 81 A LEU 66 A LEU 66 A THR 72 A THR 72 A GLN 85 A GLN 85 A ASP 86 A ASP 86 A LEU 133 A LEU 133 A ILE 135 A ILE 135 A ILE 141 A ILE 141 A LEU 143 A LEU 143 BINDING SITE FOR RESIDUE 5BN A 301 A 5BN 301 Software 11 A ILE 10 A ILE 10 11 1_555 A ALA 31 A ALA 31 11 1_555 A PHE 80 A PHE 80 11 1_555 A GLU 81 A GLU 81 11 1_555 A PHE 82 A PHE 82 11 1_555 A LEU 83 A LEU 83 11 1_555 A HIS 84 A HIS 84 11 1_555 A GLN 131 A GLN 131 11 1_555 A ASN 132 A ASN 132 11 1_555 A LEU 134 A LEU 134 11 1_555 A ASP 145 A ASP 145 11 1_555 19 P 21 21 21