data_1P54 # _entry.id 1P54 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1P54 pdb_00001p54 10.2210/pdb1p54/pdb NDB UD0030 ? ? RCSB RCSB019018 ? ? WWPDB D_1000019018 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1P4Y 'Effect of Sequence on the Conformational Geometry of DNA Holliday Junctions' unspecified PDB 1P4Z 'Effect of Sequence on the Conformational Geometry of DNA Holliday Junctions' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1P54 _pdbx_database_status.recvd_initial_deposition_date 2003-04-25 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hays, F.A.' 1 'Vargason, J.M.' 2 'Ho, P.S.' 3 # _citation.id primary _citation.title 'Effect of Sequence on the Conformation of DNA Holliday Junctions' _citation.journal_abbrev Biochemistry _citation.journal_volume 42 _citation.page_first 9586 _citation.page_last 9597 _citation.year 2003 _citation.journal_id_ASTM BICHAW _citation.country US _citation.journal_id_ISSN 0006-2960 _citation.journal_id_CSD 0033 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12911300 _citation.pdbx_database_id_DOI 10.1021/bi0346603 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hays, F.A.' 1 ? primary 'Vargason, J.M.' 2 ? primary 'Ho, P.S.' 3 ? # _cell.entry_id 1P54 _cell.length_a 64.840 _cell.length_b 22.580 _cell.length_c 38.070 _cell.angle_alpha 90.00 _cell.angle_beta 106.78 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1P54 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*CP*CP*AP*GP*TP*AP*CP*(BRU)P*GP*G)-3'" 3109.874 2 ? ? ? ? 2 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 3 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? 4 water nat water 18.015 87 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(DC)(DC)(DA)(DG)(DT)(DA)(DC)(BRU)(DG)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CCAGTACUGG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DA n 1 4 DG n 1 5 DT n 1 6 DA n 1 7 DC n 1 8 BRU n 1 9 DG n 1 10 DG n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details ;DNA was synthesized on an Applied Biosystems DNA synthesizer using phosphoramidite chemistry, with the trityl-protecting group left intact at the 5-terminal nucleotide, FOR SUBSEQUENT HPLC PURIFICATION, THEN DEPROTECTED BY TREATMENT WITH 3% ACETIC ACID FOR FIFTEEN MINUTES, NEUTRALIZED WITH AMMONIUM HYDROXIDE, AND DESALTED ON A SIGMA G-25 SEPHADEX COLUMN. ; # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1P54 _struct_ref.pdbx_db_accession 1P54 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1P54 A 1 ? 10 ? 1P54 1 ? 10 ? 1 10 2 1 1P54 B 1 ? 10 ? 1P54 11 ? 20 ? 11 20 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight BRU 'DNA linking' n "5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" ? 'C9 H12 Br N2 O8 P' 387.078 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 # _exptl.entry_id 1P54 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.93 _exptl_crystal.density_percent_sol 35.87 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.50 _exptl_crystal_grow.pdbx_details ;0.6mM DNA, 5mM Tris-HCL, 120mM calcium acetate, 16% 2-methyl-2,4-pentane diol, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K, pH 7.50 ; _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 Tris-HCL ? ? ? 1 2 1 'calcium acetate' ? ? ? 1 3 1 '2-methyl-2,4-pentane diol' ? ? ? 1 4 1 H2O ? ? ? 1 5 2 'calcium acetate' ? ? ? 1 6 2 Tris-HCL ? ? ? 1 7 2 '2-methyl-2,4-pentane diol' ? ? ? 1 8 2 H2O ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 103.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2002-12-19 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'NI FILTER' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.542 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU300' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.542 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1P54 _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 19.180 _reflns.d_resolution_high 1.800 _reflns.number_obs 4177 _reflns.number_all ? _reflns.percent_possible_obs 82.0 _reflns.pdbx_Rmerge_I_obs 0.041 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 4.05 _reflns.B_iso_Wilson_estimate 4.3 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.86 _reflns_shell.percent_possible_all 34.9 _reflns_shell.Rmerge_I_obs 0.189 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1P54 _refine.ls_number_reflns_obs 3745 _refine.ls_number_reflns_all 4011 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.18 _refine.ls_d_res_high 1.90 _refine.ls_percent_reflns_obs 86.7 _refine.ls_R_factor_obs 0.215 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.215 _refine.ls_R_factor_R_free 0.242 _refine.ls_R_factor_R_free_error 0.012 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.4 _refine.ls_number_reflns_R_free 388 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 9.50 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model '1L6B USED FOR INITIAL SOLUTION VIA MOLECULAR REPLACEMENT' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1P54 _refine_analyze.Luzzati_coordinate_error_obs 0.22 _refine_analyze.Luzzati_sigma_a_obs 0.14 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.26 _refine_analyze.Luzzati_sigma_a_free 0.18 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 404 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 87 _refine_hist.number_atoms_total 493 _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 19.18 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.005 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 0.9 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 18.30 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.37 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 1.90 _refine_ls_shell.d_res_low 2.02 _refine_ls_shell.number_reflns_R_work 385 _refine_ls_shell.R_factor_R_work 0.259 _refine_ls_shell.percent_reflns_obs 60.10 _refine_ls_shell.R_factor_R_free 0.248 _refine_ls_shell.R_factor_R_free_error 0.041 _refine_ls_shell.percent_reflns_R_free 8.8 _refine_ls_shell.number_reflns_R_free 37 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 1P54 _struct.title 'Effect of Sequence on the Conformational Geometry of DNA Holliday Junctions' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1P54 _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'DNA Holliday Junction, Four-Way Junction, stacked-X junction, brominated uracil, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? # _struct_biol.id 1 _struct_biol.details ;This entry contains the crystallographic asymmetric unit which consists of two chains A and B. The full four stranded Holliday junction structure can be generated by the following: matrix = (-1.00000 0.00001 0.00000) (0.00001 1.00000 -0.00002) (0.00000 -0.00002 -1.00000) translation = (0.00022 0.00018 -0.00034) ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DC 7 "O3'" ? ? ? 1_555 A BRU 8 P ? ? A DC 7 A BRU 8 1_555 ? ? ? ? ? ? ? 1.613 ? ? covale2 covale both ? A BRU 8 "O3'" ? ? ? 1_555 A DG 9 P ? ? A BRU 8 A DG 9 1_555 ? ? ? ? ? ? ? 1.609 ? ? covale3 covale both ? B DC 7 "O3'" ? ? ? 1_555 B BRU 8 P ? ? B DC 17 B BRU 18 1_555 ? ? ? ? ? ? ? 1.609 ? ? covale4 covale both ? B BRU 8 "O3'" ? ? ? 1_555 B DG 9 P ? ? B BRU 18 B DG 19 1_555 ? ? ? ? ? ? ? 1.612 ? ? metalc1 metalc ? ? A DA 6 OP2 ? ? ? 1_555 C NA . NA ? ? A DA 6 A NA 37 1_555 ? ? ? ? ? ? ? 2.777 ? ? metalc2 metalc ? ? E HOH . O ? ? ? 1_555 D CA . CA ? ? A HOH 27 A CA 67 1_555 ? ? ? ? ? ? ? 2.303 ? ? metalc3 metalc ? ? D CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 67 A HOH 80 1_555 ? ? ? ? ? ? ? 2.278 ? ? metalc4 metalc ? ? D CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 67 A HOH 81 1_555 ? ? ? ? ? ? ? 2.242 ? ? metalc5 metalc ? ? D CA . CA ? ? ? 1_555 E HOH . O ? ? A CA 67 A HOH 82 1_555 ? ? ? ? ? ? ? 2.948 ? ? metalc6 metalc ? ? D CA . CA ? ? ? 1_555 F HOH . O ? ? A CA 67 B HOH 69 2_555 ? ? ? ? ? ? ? 3.119 ? ? metalc7 metalc ? ? D CA . CA ? ? ? 1_555 F HOH . O ? ? A CA 67 B HOH 75 2_555 ? ? ? ? ? ? ? 3.011 ? ? metalc8 metalc ? ? D CA . CA ? ? ? 1_555 F HOH . O ? ? A CA 67 B HOH 93 2_555 ? ? ? ? ? ? ? 3.261 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 10 N1 ? ? A DC 1 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 1 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 10 N2 ? ? A DC 1 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 9 N1 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 9 O6 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 9 N2 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B BRU 8 N3 ? ? A DA 3 B BRU 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B BRU 8 O4 ? ? A DA 3 B BRU 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 7 N3 ? ? A DG 4 B DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 7 O2 ? ? A DG 4 B DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 7 N4 ? ? A DG 4 B DC 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DT 5 N3 ? ? ? 1_555 B DA 6 N1 ? ? A DT 5 B DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 6 N6 ? ? A DT 5 B DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 5 N3 ? ? A DA 6 B DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 5 O4 ? ? A DA 6 B DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NA 37 ? 2 'BINDING SITE FOR RESIDUE NA A 37' AC2 Software A CA 67 ? 5 'BINDING SITE FOR RESIDUE CA A 67' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 DA A 6 ? DA A 6 . ? 1_555 ? 2 AC1 2 DA A 6 ? DA A 6 . ? 2_555 ? 3 AC2 5 HOH E . ? HOH A 27 . ? 1_555 ? 4 AC2 5 HOH E . ? HOH A 80 . ? 1_555 ? 5 AC2 5 HOH E . ? HOH A 81 . ? 1_555 ? 6 AC2 5 HOH E . ? HOH A 82 . ? 1_555 ? 7 AC2 5 HOH F . ? HOH B 75 . ? 2_555 ? # _database_PDB_matrix.entry_id 1P54 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1P54 _atom_sites.fract_transf_matrix[1][1] 0.015423 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004649 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.044293 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.027436 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BR C CA N NA O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DC A 1 1 ? -16.936 -5.585 15.933 1.00 9.70 ? 1 DC A "O5'" 1 ATOM 2 C "C5'" . DC A 1 1 ? -15.926 -6.568 15.661 1.00 8.21 ? 1 DC A "C5'" 1 ATOM 3 C "C4'" . DC A 1 1 ? -16.564 -7.930 15.514 1.00 7.70 ? 1 DC A "C4'" 1 ATOM 4 O "O4'" . DC A 1 1 ? -17.649 -7.831 14.567 1.00 7.65 ? 1 DC A "O4'" 1 ATOM 5 C "C3'" . DC A 1 1 ? -15.649 -9.023 14.974 1.00 8.07 ? 1 DC A "C3'" 1 ATOM 6 O "O3'" . DC A 1 1 ? -16.048 -10.292 15.512 1.00 10.15 ? 1 DC A "O3'" 1 ATOM 7 C "C2'" . DC A 1 1 ? -15.875 -8.944 13.473 1.00 5.93 ? 1 DC A "C2'" 1 ATOM 8 C "C1'" . DC A 1 1 ? -17.339 -8.517 13.364 1.00 5.14 ? 1 DC A "C1'" 1 ATOM 9 N N1 . DC A 1 1 ? -17.646 -7.593 12.259 1.00 2.78 ? 1 DC A N1 1 ATOM 10 C C2 . DC A 1 1 ? -17.569 -8.048 10.943 1.00 3.88 ? 1 DC A C2 1 ATOM 11 O O2 . DC A 1 1 ? -17.258 -9.225 10.737 1.00 2.47 ? 1 DC A O2 1 ATOM 12 N N3 . DC A 1 1 ? -17.844 -7.192 9.929 1.00 2.91 ? 1 DC A N3 1 ATOM 13 C C4 . DC A 1 1 ? -18.199 -5.937 10.195 1.00 3.73 ? 1 DC A C4 1 ATOM 14 N N4 . DC A 1 1 ? -18.483 -5.136 9.172 1.00 2.27 ? 1 DC A N4 1 ATOM 15 C C5 . DC A 1 1 ? -18.291 -5.447 11.530 1.00 3.84 ? 1 DC A C5 1 ATOM 16 C C6 . DC A 1 1 ? -18.008 -6.300 12.520 1.00 2.23 ? 1 DC A C6 1 ATOM 17 P P . DC A 1 2 ? -14.989 -11.176 16.341 1.00 11.03 ? 2 DC A P 1 ATOM 18 O OP1 . DC A 1 2 ? -15.603 -12.502 16.605 1.00 9.73 ? 2 DC A OP1 1 ATOM 19 O OP2 . DC A 1 2 ? -14.504 -10.367 17.480 1.00 12.18 ? 2 DC A OP2 1 ATOM 20 O "O5'" . DC A 1 2 ? -13.778 -11.370 15.318 1.00 10.96 ? 2 DC A "O5'" 1 ATOM 21 C "C5'" . DC A 1 2 ? -13.830 -12.366 14.292 1.00 8.11 ? 2 DC A "C5'" 1 ATOM 22 C "C4'" . DC A 1 2 ? -12.781 -12.102 13.232 1.00 8.31 ? 2 DC A "C4'" 1 ATOM 23 O "O4'" . DC A 1 2 ? -13.098 -10.915 12.453 1.00 8.14 ? 2 DC A "O4'" 1 ATOM 24 C "C3'" . DC A 1 2 ? -11.347 -11.902 13.737 1.00 5.83 ? 2 DC A "C3'" 1 ATOM 25 O "O3'" . DC A 1 2 ? -10.453 -12.435 12.769 1.00 10.74 ? 2 DC A "O3'" 1 ATOM 26 C "C2'" . DC A 1 2 ? -11.189 -10.396 13.696 1.00 6.02 ? 2 DC A "C2'" 1 ATOM 27 C "C1'" . DC A 1 2 ? -11.952 -10.069 12.425 1.00 5.01 ? 2 DC A "C1'" 1 ATOM 28 N N1 . DC A 1 2 ? -12.412 -8.682 12.318 1.00 5.68 ? 2 DC A N1 1 ATOM 29 C C2 . DC A 1 2 ? -12.850 -8.212 11.075 1.00 5.93 ? 2 DC A C2 1 ATOM 30 O O2 . DC A 1 2 ? -12.783 -8.959 10.090 1.00 7.08 ? 2 DC A O2 1 ATOM 31 N N3 . DC A 1 2 ? -13.320 -6.954 10.974 1.00 7.50 ? 2 DC A N3 1 ATOM 32 C C4 . DC A 1 2 ? -13.334 -6.157 12.043 1.00 4.94 ? 2 DC A C4 1 ATOM 33 N N4 . DC A 1 2 ? -13.792 -4.911 11.884 1.00 3.08 ? 2 DC A N4 1 ATOM 34 C C5 . DC A 1 2 ? -12.871 -6.599 13.319 1.00 5.77 ? 2 DC A C5 1 ATOM 35 C C6 . DC A 1 2 ? -12.425 -7.858 13.412 1.00 4.84 ? 2 DC A C6 1 ATOM 36 P P . DA A 1 3 ? -9.337 -13.495 13.202 1.00 8.20 ? 3 DA A P 1 ATOM 37 O OP1 . DA A 1 3 ? -9.995 -14.532 14.027 1.00 6.58 ? 3 DA A OP1 1 ATOM 38 O OP2 . DA A 1 3 ? -8.190 -12.736 13.751 1.00 11.41 ? 3 DA A OP2 1 ATOM 39 O "O5'" . DA A 1 3 ? -8.916 -14.132 11.812 1.00 10.42 ? 3 DA A "O5'" 1 ATOM 40 C "C5'" . DA A 1 3 ? -9.890 -14.714 10.949 1.00 7.91 ? 3 DA A "C5'" 1 ATOM 41 C "C4'" . DA A 1 3 ? -9.674 -14.229 9.536 1.00 9.92 ? 3 DA A "C4'" 1 ATOM 42 O "O4'" . DA A 1 3 ? -9.937 -12.805 9.475 1.00 10.13 ? 3 DA A "O4'" 1 ATOM 43 C "C3'" . DA A 1 3 ? -8.246 -14.413 9.036 1.00 9.81 ? 3 DA A "C3'" 1 ATOM 44 O "O3'" . DA A 1 3 ? -8.275 -14.756 7.651 1.00 14.46 ? 3 DA A "O3'" 1 ATOM 45 C "C2'" . DA A 1 3 ? -7.610 -13.055 9.284 1.00 8.07 ? 3 DA A "C2'" 1 ATOM 46 C "C1'" . DA A 1 3 ? -8.765 -12.093 9.094 1.00 8.43 ? 3 DA A "C1'" 1 ATOM 47 N N9 . DA A 1 3 ? -8.692 -10.886 9.921 1.00 3.78 ? 3 DA A N9 1 ATOM 48 C C8 . DA A 1 3 ? -8.116 -10.752 11.160 1.00 2.94 ? 3 DA A C8 1 ATOM 49 N N7 . DA A 1 3 ? -8.228 -9.549 11.671 1.00 3.56 ? 3 DA A N7 1 ATOM 50 C C5 . DA A 1 3 ? -8.918 -8.836 10.696 1.00 2.60 ? 3 DA A C5 1 ATOM 51 C C6 . DA A 1 3 ? -9.351 -7.494 10.629 1.00 2.61 ? 3 DA A C6 1 ATOM 52 N N6 . DA A 1 3 ? -9.168 -6.604 11.606 1.00 1.52 ? 3 DA A N6 1 ATOM 53 N N1 . DA A 1 3 ? -9.994 -7.095 9.511 1.00 1.26 ? 3 DA A N1 1 ATOM 54 C C2 . DA A 1 3 ? -10.197 -7.994 8.537 1.00 6.08 ? 3 DA A C2 1 ATOM 55 N N3 . DA A 1 3 ? -9.847 -9.286 8.486 1.00 6.16 ? 3 DA A N3 1 ATOM 56 C C4 . DA A 1 3 ? -9.203 -9.648 9.610 1.00 4.73 ? 3 DA A C4 1 ATOM 57 P P . DG A 1 4 ? -6.901 -14.869 6.821 1.00 12.96 ? 4 DG A P 1 ATOM 58 O OP1 . DG A 1 4 ? -7.031 -16.015 5.900 1.00 16.67 ? 4 DG A OP1 1 ATOM 59 O OP2 . DG A 1 4 ? -5.759 -14.820 7.767 1.00 16.16 ? 4 DG A OP2 1 ATOM 60 O "O5'" . DG A 1 4 ? -6.889 -13.532 5.959 1.00 15.25 ? 4 DG A "O5'" 1 ATOM 61 C "C5'" . DG A 1 4 ? -8.011 -13.184 5.160 1.00 15.41 ? 4 DG A "C5'" 1 ATOM 62 C "C4'" . DG A 1 4 ? -7.817 -11.818 4.549 1.00 14.74 ? 4 DG A "C4'" 1 ATOM 63 O "O4'" . DG A 1 4 ? -7.942 -10.797 5.575 1.00 13.25 ? 4 DG A "O4'" 1 ATOM 64 C "C3'" . DG A 1 4 ? -6.460 -11.598 3.872 1.00 12.04 ? 4 DG A "C3'" 1 ATOM 65 O "O3'" . DG A 1 4 ? -6.652 -11.049 2.562 1.00 16.78 ? 4 DG A "O3'" 1 ATOM 66 C "C2'" . DG A 1 4 ? -5.758 -10.613 4.792 1.00 12.02 ? 4 DG A "C2'" 1 ATOM 67 C "C1'" . DG A 1 4 ? -6.920 -9.842 5.397 1.00 13.20 ? 4 DG A "C1'" 1 ATOM 68 N N9 . DG A 1 4 ? -6.644 -9.223 6.689 1.00 11.07 ? 4 DG A N9 1 ATOM 69 C C8 . DG A 1 4 ? -5.937 -9.765 7.732 1.00 14.04 ? 4 DG A C8 1 ATOM 70 N N7 . DG A 1 4 ? -5.813 -8.955 8.747 1.00 13.02 ? 4 DG A N7 1 ATOM 71 C C5 . DG A 1 4 ? -6.494 -7.811 8.358 1.00 12.93 ? 4 DG A C5 1 ATOM 72 C C6 . DG A 1 4 ? -6.709 -6.588 9.050 1.00 11.65 ? 4 DG A C6 1 ATOM 73 O O6 . DG A 1 4 ? -6.345 -6.273 10.184 1.00 13.44 ? 4 DG A O6 1 ATOM 74 N N1 . DG A 1 4 ? -7.444 -5.690 8.289 1.00 11.51 ? 4 DG A N1 1 ATOM 75 C C2 . DG A 1 4 ? -7.931 -5.936 7.030 1.00 11.96 ? 4 DG A C2 1 ATOM 76 N N2 . DG A 1 4 ? -8.617 -4.930 6.463 1.00 9.59 ? 4 DG A N2 1 ATOM 77 N N3 . DG A 1 4 ? -7.755 -7.079 6.376 1.00 10.35 ? 4 DG A N3 1 ATOM 78 C C4 . DG A 1 4 ? -7.024 -7.963 7.094 1.00 12.78 ? 4 DG A C4 1 ATOM 79 P P . DT A 1 5 ? -5.400 -10.915 1.546 1.00 13.10 ? 5 DT A P 1 ATOM 80 O OP1 . DT A 1 5 ? -5.934 -10.935 0.162 1.00 13.28 ? 5 DT A OP1 1 ATOM 81 O OP2 . DT A 1 5 ? -4.328 -11.861 1.940 1.00 15.01 ? 5 DT A OP2 1 ATOM 82 O "O5'" . DT A 1 5 ? -4.902 -9.432 1.817 1.00 15.00 ? 5 DT A "O5'" 1 ATOM 83 C "C5'" . DT A 1 5 ? -5.788 -8.337 1.594 1.00 10.74 ? 5 DT A "C5'" 1 ATOM 84 C "C4'" . DT A 1 5 ? -5.128 -7.045 2.006 1.00 11.94 ? 5 DT A "C4'" 1 ATOM 85 O "O4'" . DT A 1 5 ? -5.149 -6.890 3.445 1.00 4.55 ? 5 DT A "O4'" 1 ATOM 86 C "C3'" . DT A 1 5 ? -3.659 -6.938 1.586 1.00 9.36 ? 5 DT A "C3'" 1 ATOM 87 O "O3'" . DT A 1 5 ? -3.392 -5.600 1.192 1.00 8.01 ? 5 DT A "O3'" 1 ATOM 88 C "C2'" . DT A 1 5 ? -2.914 -7.195 2.883 1.00 9.81 ? 5 DT A "C2'" 1 ATOM 89 C "C1'" . DT A 1 5 ? -3.854 -6.504 3.850 1.00 11.47 ? 5 DT A "C1'" 1 ATOM 90 N N1 . DT A 1 5 ? -3.678 -6.851 5.261 1.00 9.51 ? 5 DT A N1 1 ATOM 91 C C2 . DT A 1 5 ? -3.922 -5.868 6.183 1.00 10.73 ? 5 DT A C2 1 ATOM 92 O O2 . DT A 1 5 ? -4.344 -4.763 5.874 1.00 10.97 ? 5 DT A O2 1 ATOM 93 N N3 . DT A 1 5 ? -3.659 -6.226 7.481 1.00 10.63 ? 5 DT A N3 1 ATOM 94 C C4 . DT A 1 5 ? -3.200 -7.452 7.926 1.00 11.44 ? 5 DT A C4 1 ATOM 95 O O4 . DT A 1 5 ? -2.977 -7.622 9.122 1.00 16.67 ? 5 DT A O4 1 ATOM 96 C C5 . DT A 1 5 ? -3.010 -8.452 6.895 1.00 11.04 ? 5 DT A C5 1 ATOM 97 C C7 . DT A 1 5 ? -2.553 -9.825 7.274 1.00 11.21 ? 5 DT A C7 1 ATOM 98 C C6 . DT A 1 5 ? -3.258 -8.102 5.633 1.00 10.82 ? 5 DT A C6 1 ATOM 99 P P . DA A 1 6 ? -3.324 -5.232 -0.362 1.00 6.61 ? 6 DA A P 1 ATOM 100 O OP1 . DA A 1 6 ? -4.676 -5.521 -0.898 1.00 4.76 ? 6 DA A OP1 1 ATOM 101 O OP2 . DA A 1 6 ? -2.159 -5.971 -0.911 1.00 4.72 ? 6 DA A OP2 1 ATOM 102 O "O5'" . DA A 1 6 ? -3.076 -3.653 -0.325 1.00 2.02 ? 6 DA A "O5'" 1 ATOM 103 C "C5'" . DA A 1 6 ? -4.117 -2.755 0.091 1.00 1.80 ? 6 DA A "C5'" 1 ATOM 104 C "C4'" . DA A 1 6 ? -3.562 -1.600 0.900 1.00 3.35 ? 6 DA A "C4'" 1 ATOM 105 O "O4'" . DA A 1 6 ? -3.258 -1.999 2.257 1.00 1.95 ? 6 DA A "O4'" 1 ATOM 106 C "C3'" . DA A 1 6 ? -2.284 -0.956 0.355 1.00 1.66 ? 6 DA A "C3'" 1 ATOM 107 O "O3'" . DA A 1 6 ? -2.308 0.448 0.620 1.00 1.00 ? 6 DA A "O3'" 1 ATOM 108 C "C2'" . DA A 1 6 ? -1.203 -1.591 1.207 1.00 1.00 ? 6 DA A "C2'" 1 ATOM 109 C "C1'" . DA A 1 6 ? -1.900 -1.692 2.554 1.00 2.51 ? 6 DA A "C1'" 1 ATOM 110 N N9 . DA A 1 6 ? -1.393 -2.749 3.421 1.00 1.00 ? 6 DA A N9 1 ATOM 111 C C8 . DA A 1 6 ? -0.837 -3.957 3.070 1.00 1.00 ? 6 DA A C8 1 ATOM 112 N N7 . DA A 1 6 ? -0.525 -4.717 4.098 1.00 2.90 ? 6 DA A N7 1 ATOM 113 C C5 . DA A 1 6 ? -0.896 -3.954 5.198 1.00 1.00 ? 6 DA A C5 1 ATOM 114 C C6 . DA A 1 6 ? -0.846 -4.197 6.591 1.00 1.96 ? 6 DA A C6 1 ATOM 115 N N6 . DA A 1 6 ? -0.428 -5.351 7.140 1.00 1.00 ? 6 DA A N6 1 ATOM 116 N N1 . DA A 1 6 ? -1.257 -3.211 7.409 1.00 1.00 ? 6 DA A N1 1 ATOM 117 C C2 . DA A 1 6 ? -1.726 -2.075 6.868 1.00 2.45 ? 6 DA A C2 1 ATOM 118 N N3 . DA A 1 6 ? -1.858 -1.740 5.582 1.00 1.00 ? 6 DA A N3 1 ATOM 119 C C4 . DA A 1 6 ? -1.413 -2.729 4.791 1.00 1.92 ? 6 DA A C4 1 ATOM 120 P P . DC A 1 7 ? -2.966 1.445 -0.445 1.00 3.21 ? 7 DC A P 1 ATOM 121 O OP1 . DC A 1 7 ? -2.898 2.841 0.070 1.00 3.02 ? 7 DC A OP1 1 ATOM 122 O OP2 . DC A 1 7 ? -4.269 0.893 -0.866 1.00 3.93 ? 7 DC A OP2 1 ATOM 123 O "O5'" . DC A 1 7 ? -1.982 1.349 -1.690 1.00 2.75 ? 7 DC A "O5'" 1 ATOM 124 C "C5'" . DC A 1 7 ? -0.649 1.818 -1.593 1.00 1.00 ? 7 DC A "C5'" 1 ATOM 125 C "C4'" . DC A 1 7 ? -0.122 2.116 -2.969 1.00 2.19 ? 7 DC A "C4'" 1 ATOM 126 O "O4'" . DC A 1 7 ? 0.044 0.848 -3.653 1.00 2.53 ? 7 DC A "O4'" 1 ATOM 127 C "C3'" . DC A 1 7 ? -1.099 2.946 -3.807 1.00 1.25 ? 7 DC A "C3'" 1 ATOM 128 O "O3'" . DC A 1 7 ? -0.413 3.957 -4.543 1.00 4.86 ? 7 DC A "O3'" 1 ATOM 129 C "C2'" . DC A 1 7 ? -1.744 1.933 -4.734 1.00 2.46 ? 7 DC A "C2'" 1 ATOM 130 C "C1'" . DC A 1 7 ? -0.706 0.823 -4.852 1.00 1.41 ? 7 DC A "C1'" 1 ATOM 131 N N1 . DC A 1 7 ? -1.288 -0.532 -4.998 1.00 4.20 ? 7 DC A N1 1 ATOM 132 C C2 . DC A 1 7 ? -1.638 -0.968 -6.278 1.00 2.55 ? 7 DC A C2 1 ATOM 133 O O2 . DC A 1 7 ? -1.432 -0.213 -7.235 1.00 1.46 ? 7 DC A O2 1 ATOM 134 N N3 . DC A 1 7 ? -2.187 -2.194 -6.437 1.00 1.02 ? 7 DC A N3 1 ATOM 135 C C4 . DC A 1 7 ? -2.391 -2.977 -5.373 1.00 3.20 ? 7 DC A C4 1 ATOM 136 N N4 . DC A 1 7 ? -2.950 -4.182 -5.578 1.00 3.63 ? 7 DC A N4 1 ATOM 137 C C5 . DC A 1 7 ? -2.036 -2.563 -4.055 1.00 1.00 ? 7 DC A C5 1 ATOM 138 C C6 . DC A 1 7 ? -1.490 -1.345 -3.915 1.00 1.70 ? 7 DC A C6 1 HETATM 139 N N1 . BRU A 1 8 ? -4.721 2.093 -7.672 1.00 7.56 ? 8 BRU A N1 1 HETATM 140 C C2 . BRU A 1 8 ? -5.106 1.015 -8.447 1.00 6.55 ? 8 BRU A C2 1 HETATM 141 N N3 . BRU A 1 8 ? -5.420 -0.119 -7.740 1.00 1.27 ? 8 BRU A N3 1 HETATM 142 C C4 . BRU A 1 8 ? -5.345 -0.284 -6.368 1.00 7.65 ? 8 BRU A C4 1 HETATM 143 C C5 . BRU A 1 8 ? -4.901 0.865 -5.662 1.00 8.27 ? 8 BRU A C5 1 HETATM 144 C C6 . BRU A 1 8 ? -4.607 1.982 -6.315 1.00 7.13 ? 8 BRU A C6 1 HETATM 145 O O2 . BRU A 1 8 ? -5.142 1.060 -9.670 1.00 1.18 ? 8 BRU A O2 1 HETATM 146 O O4 . BRU A 1 8 ? -5.619 -1.373 -5.861 1.00 1.87 ? 8 BRU A O4 1 HETATM 147 BR BR . BRU A 1 8 ? -4.787 0.698 -3.849 1.00 9.41 ? 8 BRU A BR 1 HETATM 148 C "C1'" . BRU A 1 8 ? -4.474 3.371 -8.346 1.00 7.03 ? 8 BRU A "C1'" 1 HETATM 149 C "C2'" . BRU A 1 8 ? -4.898 4.581 -7.535 1.00 7.66 ? 8 BRU A "C2'" 1 HETATM 150 C "C3'" . BRU A 1 8 ? -4.065 5.655 -8.196 1.00 7.86 ? 8 BRU A "C3'" 1 HETATM 151 C "C4'" . BRU A 1 8 ? -2.750 4.928 -8.495 1.00 8.89 ? 8 BRU A "C4'" 1 HETATM 152 O "O3'" . BRU A 1 8 ? -4.702 5.981 -9.425 1.00 9.39 ? 8 BRU A "O3'" 1 HETATM 153 O "O4'" . BRU A 1 8 ? -3.078 3.519 -8.551 1.00 6.78 ? 8 BRU A "O4'" 1 HETATM 154 C "C5'" . BRU A 1 8 ? -1.635 5.180 -7.505 1.00 9.20 ? 8 BRU A "C5'" 1 HETATM 155 O "O5'" . BRU A 1 8 ? -2.092 4.967 -6.174 1.00 8.50 ? 8 BRU A "O5'" 1 HETATM 156 P P . BRU A 1 8 ? -1.174 5.330 -4.916 1.00 12.93 ? 8 BRU A P 1 HETATM 157 O OP1 . BRU A 1 8 ? -0.125 6.282 -5.361 1.00 8.89 ? 8 BRU A OP1 1 HETATM 158 O OP2 . BRU A 1 8 ? -2.085 5.700 -3.810 1.00 7.72 ? 8 BRU A OP2 1 ATOM 159 P P . DG A 1 9 ? -4.300 7.335 -10.196 1.00 6.52 ? 9 DG A P 1 ATOM 160 O OP1 . DG A 1 9 ? -2.830 7.385 -10.256 1.00 7.15 ? 9 DG A OP1 1 ATOM 161 O OP2 . DG A 1 9 ? -5.054 8.460 -9.578 1.00 8.04 ? 9 DG A OP2 1 ATOM 162 O "O5'" . DG A 1 9 ? -4.854 7.118 -11.674 1.00 8.83 ? 9 DG A "O5'" 1 ATOM 163 C "C5'" . DG A 1 9 ? -4.012 6.596 -12.697 1.00 8.24 ? 9 DG A "C5'" 1 ATOM 164 C "C4'" . DG A 1 9 ? -4.813 5.701 -13.608 1.00 5.90 ? 9 DG A "C4'" 1 ATOM 165 O "O4'" . DG A 1 9 ? -5.402 4.654 -12.796 1.00 3.92 ? 9 DG A "O4'" 1 ATOM 166 C "C3'" . DG A 1 9 ? -5.980 6.410 -14.291 1.00 6.51 ? 9 DG A "C3'" 1 ATOM 167 O "O3'" . DG A 1 9 ? -6.163 5.881 -15.611 1.00 2.82 ? 9 DG A "O3'" 1 ATOM 168 C "C2'" . DG A 1 9 ? -7.156 6.117 -13.372 1.00 5.18 ? 9 DG A "C2'" 1 ATOM 169 C "C1'" . DG A 1 9 ? -6.814 4.743 -12.813 1.00 3.92 ? 9 DG A "C1'" 1 ATOM 170 N N9 . DG A 1 9 ? -7.277 4.476 -11.456 1.00 3.02 ? 9 DG A N9 1 ATOM 171 C C8 . DG A 1 9 ? -7.424 5.371 -10.422 1.00 4.30 ? 9 DG A C8 1 ATOM 172 N N7 . DG A 1 9 ? -7.808 4.805 -9.307 1.00 3.48 ? 9 DG A N7 1 ATOM 173 C C5 . DG A 1 9 ? -7.934 3.457 -9.631 1.00 5.50 ? 9 DG A C5 1 ATOM 174 C C6 . DG A 1 9 ? -8.319 2.332 -8.830 1.00 3.65 ? 9 DG A C6 1 ATOM 175 O O6 . DG A 1 9 ? -8.622 2.297 -7.638 1.00 2.55 ? 9 DG A O6 1 ATOM 176 N N1 . DG A 1 9 ? -8.326 1.158 -9.571 1.00 3.63 ? 9 DG A N1 1 ATOM 177 C C2 . DG A 1 9 ? -8.004 1.062 -10.902 1.00 5.94 ? 9 DG A C2 1 ATOM 178 N N2 . DG A 1 9 ? -8.082 -0.165 -11.447 1.00 1.81 ? 9 DG A N2 1 ATOM 179 N N3 . DG A 1 9 ? -7.633 2.089 -11.649 1.00 5.11 ? 9 DG A N3 1 ATOM 180 C C4 . DG A 1 9 ? -7.624 3.244 -10.957 1.00 2.84 ? 9 DG A C4 1 ATOM 181 P P . DG A 1 10 ? -7.374 6.415 -16.522 1.00 3.43 ? 10 DG A P 1 ATOM 182 O OP1 . DG A 1 10 ? -7.017 6.068 -17.918 1.00 1.46 ? 10 DG A OP1 1 ATOM 183 O OP2 . DG A 1 10 ? -7.720 7.796 -16.169 1.00 1.62 ? 10 DG A OP2 1 ATOM 184 O "O5'" . DG A 1 10 ? -8.586 5.491 -16.075 1.00 1.00 ? 10 DG A "O5'" 1 ATOM 185 C "C5'" . DG A 1 10 ? -8.626 4.128 -16.488 1.00 1.00 ? 10 DG A "C5'" 1 ATOM 186 C "C4'" . DG A 1 10 ? -9.979 3.532 -16.190 1.00 6.66 ? 10 DG A "C4'" 1 ATOM 187 O "O4'" . DG A 1 10 ? -10.123 3.315 -14.762 1.00 3.47 ? 10 DG A "O4'" 1 ATOM 188 C "C3'" . DG A 1 10 ? -11.148 4.427 -16.607 1.00 2.16 ? 10 DG A "C3'" 1 ATOM 189 O "O3'" . DG A 1 10 ? -12.280 3.659 -16.990 1.00 8.92 ? 10 DG A "O3'" 1 ATOM 190 C "C2'" . DG A 1 10 ? -11.533 5.103 -15.307 1.00 5.60 ? 10 DG A "C2'" 1 ATOM 191 C "C1'" . DG A 1 10 ? -11.299 3.978 -14.319 1.00 7.99 ? 10 DG A "C1'" 1 ATOM 192 N N9 . DG A 1 10 ? -11.093 4.395 -12.935 1.00 9.62 ? 10 DG A N9 1 ATOM 193 C C8 . DG A 1 10 ? -10.695 5.628 -12.465 1.00 8.94 ? 10 DG A C8 1 ATOM 194 N N7 . DG A 1 10 ? -10.609 5.672 -11.160 1.00 9.26 ? 10 DG A N7 1 ATOM 195 C C5 . DG A 1 10 ? -10.977 4.395 -10.753 1.00 7.89 ? 10 DG A C5 1 ATOM 196 C C6 . DG A 1 10 ? -11.090 3.839 -9.456 1.00 5.83 ? 10 DG A C6 1 ATOM 197 O O6 . DG A 1 10 ? -10.882 4.384 -8.365 1.00 5.50 ? 10 DG A O6 1 ATOM 198 N N1 . DG A 1 10 ? -11.489 2.501 -9.509 1.00 6.83 ? 10 DG A N1 1 ATOM 199 C C2 . DG A 1 10 ? -11.748 1.797 -10.670 1.00 5.45 ? 10 DG A C2 1 ATOM 200 N N2 . DG A 1 10 ? -12.120 0.517 -10.539 1.00 7.28 ? 10 DG A N2 1 ATOM 201 N N3 . DG A 1 10 ? -11.651 2.310 -11.871 1.00 5.71 ? 10 DG A N3 1 ATOM 202 C C4 . DG A 1 10 ? -11.269 3.599 -11.841 1.00 6.92 ? 10 DG A C4 1 ATOM 203 O "O5'" . DC B 1 1 ? 13.474 -4.372 1.717 1.00 14.15 ? 11 DC B "O5'" 1 ATOM 204 C "C5'" . DC B 1 1 ? 13.782 -3.119 2.324 1.00 15.47 ? 11 DC B "C5'" 1 ATOM 205 C "C4'" . DC B 1 1 ? 14.277 -3.290 3.741 1.00 15.06 ? 11 DC B "C4'" 1 ATOM 206 O "O4'" . DC B 1 1 ? 14.324 -1.996 4.392 1.00 12.57 ? 11 DC B "O4'" 1 ATOM 207 C "C3'" . DC B 1 1 ? 13.375 -4.167 4.611 1.00 14.44 ? 11 DC B "C3'" 1 ATOM 208 O "O3'" . DC B 1 1 ? 14.180 -4.889 5.550 1.00 15.28 ? 11 DC B "O3'" 1 ATOM 209 C "C2'" . DC B 1 1 ? 12.480 -3.159 5.309 1.00 12.17 ? 11 DC B "C2'" 1 ATOM 210 C "C1'" . DC B 1 1 ? 13.410 -1.962 5.485 1.00 12.47 ? 11 DC B "C1'" 1 ATOM 211 N N1 . DC B 1 1 ? 12.723 -0.664 5.445 1.00 12.23 ? 11 DC B N1 1 ATOM 212 C C2 . DC B 1 1 ? 12.385 -0.038 6.651 1.00 11.28 ? 11 DC B C2 1 ATOM 213 O O2 . DC B 1 1 ? 12.674 -0.599 7.721 1.00 10.70 ? 11 DC B O2 1 ATOM 214 N N3 . DC B 1 1 ? 11.755 1.159 6.618 1.00 10.15 ? 11 DC B N3 1 ATOM 215 C C4 . DC B 1 1 ? 11.458 1.726 5.444 1.00 11.32 ? 11 DC B C4 1 ATOM 216 N N4 . DC B 1 1 ? 10.823 2.899 5.457 1.00 10.78 ? 11 DC B N4 1 ATOM 217 C C5 . DC B 1 1 ? 11.793 1.113 4.205 1.00 9.55 ? 11 DC B C5 1 ATOM 218 C C6 . DC B 1 1 ? 12.419 -0.071 4.251 1.00 11.82 ? 11 DC B C6 1 ATOM 219 P P . DC B 1 2 ? 13.786 -6.391 5.946 1.00 17.01 ? 12 DC B P 1 ATOM 220 O OP1 . DC B 1 2 ? 14.926 -6.987 6.690 1.00 13.06 ? 12 DC B OP1 1 ATOM 221 O OP2 . DC B 1 2 ? 13.247 -7.076 4.737 1.00 16.54 ? 12 DC B OP2 1 ATOM 222 O "O5'" . DC B 1 2 ? 12.600 -6.220 6.991 1.00 14.56 ? 12 DC B "O5'" 1 ATOM 223 C "C5'" . DC B 1 2 ? 12.877 -6.150 8.379 1.00 10.51 ? 12 DC B "C5'" 1 ATOM 224 C "C4'" . DC B 1 2 ? 11.598 -5.931 9.148 1.00 10.18 ? 12 DC B "C4'" 1 ATOM 225 O "O4'" . DC B 1 2 ? 11.044 -4.640 8.828 1.00 6.68 ? 12 DC B "O4'" 1 ATOM 226 C "C3'" . DC B 1 2 ? 10.479 -6.937 8.870 1.00 8.39 ? 12 DC B "C3'" 1 ATOM 227 O "O3'" . DC B 1 2 ? 9.734 -7.061 10.080 1.00 6.23 ? 12 DC B "O3'" 1 ATOM 228 C "C2'" . DC B 1 2 ? 9.612 -6.198 7.867 1.00 6.05 ? 12 DC B "C2'" 1 ATOM 229 C "C1'" . DC B 1 2 ? 9.682 -4.820 8.485 1.00 7.77 ? 12 DC B "C1'" 1 ATOM 230 N N1 . DC B 1 2 ? 9.246 -3.653 7.714 1.00 5.97 ? 12 DC B N1 1 ATOM 231 C C2 . DC B 1 2 ? 9.012 -2.469 8.409 1.00 8.73 ? 12 DC B C2 1 ATOM 232 O O2 . DC B 1 2 ? 9.128 -2.467 9.640 1.00 4.26 ? 12 DC B O2 1 ATOM 233 N N3 . DC B 1 2 ? 8.663 -1.353 7.722 1.00 8.57 ? 12 DC B N3 1 ATOM 234 C C4 . DC B 1 2 ? 8.537 -1.401 6.398 1.00 7.01 ? 12 DC B C4 1 ATOM 235 N N4 . DC B 1 2 ? 8.211 -0.270 5.761 1.00 8.27 ? 12 DC B N4 1 ATOM 236 C C5 . DC B 1 2 ? 8.742 -2.604 5.667 1.00 8.84 ? 12 DC B C5 1 ATOM 237 C C6 . DC B 1 2 ? 9.087 -3.699 6.359 1.00 8.33 ? 12 DC B C6 1 ATOM 238 P P . DA B 1 3 ? 9.796 -8.415 10.926 1.00 7.79 ? 13 DA B P 1 ATOM 239 O OP1 . DA B 1 3 ? 11.212 -8.828 11.133 1.00 5.17 ? 13 DA B OP1 1 ATOM 240 O OP2 . DA B 1 3 ? 8.842 -9.346 10.296 1.00 1.00 ? 13 DA B OP2 1 ATOM 241 O "O5'" . DA B 1 3 ? 9.245 -7.985 12.349 1.00 6.96 ? 13 DA B "O5'" 1 ATOM 242 C "C5'" . DA B 1 3 ? 10.068 -7.259 13.248 1.00 5.11 ? 13 DA B "C5'" 1 ATOM 243 C "C4'" . DA B 1 3 ? 9.225 -6.318 14.070 1.00 3.33 ? 13 DA B "C4'" 1 ATOM 244 O "O4'" . DA B 1 3 ? 8.620 -5.346 13.192 1.00 4.17 ? 13 DA B "O4'" 1 ATOM 245 C "C3'" . DA B 1 3 ? 8.072 -6.981 14.814 1.00 1.25 ? 13 DA B "C3'" 1 ATOM 246 O "O3'" . DA B 1 3 ? 7.896 -6.319 16.061 1.00 1.00 ? 13 DA B "O3'" 1 ATOM 247 C "C2'" . DA B 1 3 ? 6.884 -6.777 13.895 1.00 1.00 ? 13 DA B "C2'" 1 ATOM 248 C "C1'" . DA B 1 3 ? 7.204 -5.472 13.183 1.00 2.44 ? 13 DA B "C1'" 1 ATOM 249 N N9 . DA B 1 3 ? 6.794 -5.449 11.781 1.00 2.99 ? 13 DA B N9 1 ATOM 250 C C8 . DA B 1 3 ? 6.816 -6.501 10.900 1.00 2.47 ? 13 DA B C8 1 ATOM 251 N N7 . DA B 1 3 ? 6.461 -6.180 9.686 1.00 3.76 ? 13 DA B N7 1 ATOM 252 C C5 . DA B 1 3 ? 6.174 -4.825 9.772 1.00 2.31 ? 13 DA B C5 1 ATOM 253 C C6 . DA B 1 3 ? 5.746 -3.886 8.813 1.00 3.96 ? 13 DA B C6 1 ATOM 254 N N6 . DA B 1 3 ? 5.567 -4.178 7.518 1.00 1.00 ? 13 DA B N6 1 ATOM 255 N N1 . DA B 1 3 ? 5.519 -2.620 9.232 1.00 1.74 ? 13 DA B N1 1 ATOM 256 C C2 . DA B 1 3 ? 5.743 -2.322 10.525 1.00 3.42 ? 13 DA B C2 1 ATOM 257 N N3 . DA B 1 3 ? 6.159 -3.112 11.512 1.00 1.71 ? 13 DA B N3 1 ATOM 258 C C4 . DA B 1 3 ? 6.355 -4.367 11.063 1.00 1.00 ? 13 DA B C4 1 ATOM 259 P P . DG B 1 4 ? 6.628 -6.669 16.986 1.00 5.67 ? 14 DG B P 1 ATOM 260 O OP1 . DG B 1 4 ? 7.076 -6.380 18.365 1.00 1.00 ? 14 DG B OP1 1 ATOM 261 O OP2 . DG B 1 4 ? 6.108 -8.015 16.637 1.00 1.85 ? 14 DG B OP2 1 ATOM 262 O "O5'" . DG B 1 4 ? 5.571 -5.559 16.552 1.00 1.00 ? 14 DG B "O5'" 1 ATOM 263 C "C5'" . DG B 1 4 ? 5.981 -4.206 16.531 1.00 1.96 ? 14 DG B "C5'" 1 ATOM 264 C "C4'" . DG B 1 4 ? 4.872 -3.302 16.054 1.00 5.41 ? 14 DG B "C4'" 1 ATOM 265 O "O4'" . DG B 1 4 ? 4.750 -3.346 14.612 1.00 6.86 ? 14 DG B "O4'" 1 ATOM 266 C "C3'" . DG B 1 4 ? 3.477 -3.545 16.629 1.00 5.87 ? 14 DG B "C3'" 1 ATOM 267 O "O3'" . DG B 1 4 ? 2.976 -2.294 17.114 1.00 7.41 ? 14 DG B "O3'" 1 ATOM 268 C "C2'" . DG B 1 4 ? 2.682 -4.064 15.438 1.00 5.68 ? 14 DG B "C2'" 1 ATOM 269 C "C1'" . DG B 1 4 ? 3.383 -3.394 14.260 1.00 4.25 ? 14 DG B "C1'" 1 ATOM 270 N N9 . DG B 1 4 ? 3.293 -4.088 12.982 1.00 3.28 ? 14 DG B N9 1 ATOM 271 C C8 . DG B 1 4 ? 3.500 -5.424 12.739 1.00 1.75 ? 14 DG B C8 1 ATOM 272 N N7 . DG B 1 4 ? 3.347 -5.745 11.481 1.00 1.00 ? 14 DG B N7 1 ATOM 273 C C5 . DG B 1 4 ? 3.015 -4.547 10.855 1.00 2.18 ? 14 DG B C5 1 ATOM 274 C C6 . DG B 1 4 ? 2.718 -4.264 9.487 1.00 1.00 ? 14 DG B C6 1 ATOM 275 O O6 . DG B 1 4 ? 2.709 -5.034 8.531 1.00 1.00 ? 14 DG B O6 1 ATOM 276 N N1 . DG B 1 4 ? 2.425 -2.917 9.291 1.00 1.00 ? 14 DG B N1 1 ATOM 277 C C2 . DG B 1 4 ? 2.432 -1.958 10.279 1.00 2.70 ? 14 DG B C2 1 ATOM 278 N N2 . DG B 1 4 ? 2.128 -0.704 9.899 1.00 3.62 ? 14 DG B N2 1 ATOM 279 N N3 . DG B 1 4 ? 2.716 -2.207 11.550 1.00 4.70 ? 14 DG B N3 1 ATOM 280 C C4 . DG B 1 4 ? 2.988 -3.512 11.765 1.00 3.37 ? 14 DG B C4 1 ATOM 281 P P . DT B 1 5 ? 1.425 -2.135 17.477 1.00 8.45 ? 15 DT B P 1 ATOM 282 O OP1 . DT B 1 5 ? 1.331 -1.279 18.676 1.00 5.30 ? 15 DT B OP1 1 ATOM 283 O OP2 . DT B 1 5 ? 0.771 -3.475 17.466 1.00 5.21 ? 15 DT B OP2 1 ATOM 284 O "O5'" . DT B 1 5 ? 0.873 -1.281 16.246 1.00 9.04 ? 15 DT B "O5'" 1 ATOM 285 C "C5'" . DT B 1 5 ? 1.595 -0.133 15.791 1.00 9.51 ? 15 DT B "C5'" 1 ATOM 286 C "C4'" . DT B 1 5 ? 0.852 0.552 14.669 1.00 8.86 ? 15 DT B "C4'" 1 ATOM 287 O "O4'" . DT B 1 5 ? 0.870 -0.257 13.467 1.00 5.62 ? 15 DT B "O4'" 1 ATOM 288 C "C3'" . DT B 1 5 ? -0.618 0.803 14.977 1.00 10.62 ? 15 DT B "C3'" 1 ATOM 289 O "O3'" . DT B 1 5 ? -1.031 2.032 14.396 1.00 12.56 ? 15 DT B "O3'" 1 ATOM 290 C "C2'" . DT B 1 5 ? -1.314 -0.332 14.260 1.00 10.74 ? 15 DT B "C2'" 1 ATOM 291 C "C1'" . DT B 1 5 ? -0.463 -0.427 13.015 1.00 9.42 ? 15 DT B "C1'" 1 ATOM 292 N N1 . DT B 1 5 ? -0.547 -1.716 12.331 1.00 8.65 ? 15 DT B N1 1 ATOM 293 C C2 . DT B 1 5 ? -0.854 -1.737 10.985 1.00 8.03 ? 15 DT B C2 1 ATOM 294 O O2 . DT B 1 5 ? -1.120 -0.736 10.341 1.00 5.31 ? 15 DT B O2 1 ATOM 295 N N3 . DT B 1 5 ? -0.844 -2.988 10.421 1.00 9.38 ? 15 DT B N3 1 ATOM 296 C C4 . DT B 1 5 ? -0.574 -4.188 11.057 1.00 7.13 ? 15 DT B C4 1 ATOM 297 O O4 . DT B 1 5 ? -0.551 -5.222 10.407 1.00 3.41 ? 15 DT B O4 1 ATOM 298 C C5 . DT B 1 5 ? -0.310 -4.088 12.482 1.00 7.75 ? 15 DT B C5 1 ATOM 299 C C7 . DT B 1 5 ? -0.057 -5.330 13.279 1.00 9.27 ? 15 DT B C7 1 ATOM 300 C C6 . DT B 1 5 ? -0.305 -2.873 13.032 1.00 8.24 ? 15 DT B C6 1 ATOM 301 P P . DA B 1 6 ? -2.305 2.792 15.001 1.00 13.15 ? 16 DA B P 1 ATOM 302 O OP1 . DA B 1 6 ? -1.908 4.213 15.150 1.00 17.00 ? 16 DA B OP1 1 ATOM 303 O OP2 . DA B 1 6 ? -2.813 2.032 16.173 1.00 14.80 ? 16 DA B OP2 1 ATOM 304 O "O5'" . DA B 1 6 ? -3.390 2.683 13.845 1.00 12.73 ? 16 DA B "O5'" 1 ATOM 305 C "C5'" . DA B 1 6 ? -3.066 3.087 12.525 1.00 12.12 ? 16 DA B "C5'" 1 ATOM 306 C "C4'" . DA B 1 6 ? -4.128 2.619 11.562 1.00 10.95 ? 16 DA B "C4'" 1 ATOM 307 O "O4'" . DA B 1 6 ? -3.921 1.239 11.187 1.00 7.11 ? 16 DA B "O4'" 1 ATOM 308 C "C3'" . DA B 1 6 ? -5.552 2.709 12.101 1.00 9.72 ? 16 DA B "C3'" 1 ATOM 309 O "O3'" . DA B 1 6 ? -6.386 3.211 11.066 1.00 13.87 ? 16 DA B "O3'" 1 ATOM 310 C "C2'" . DA B 1 6 ? -5.902 1.266 12.427 1.00 10.01 ? 16 DA B "C2'" 1 ATOM 311 C "C1'" . DA B 1 6 ? -5.119 0.509 11.362 1.00 6.24 ? 16 DA B "C1'" 1 ATOM 312 N N9 . DA B 1 6 ? -4.747 -0.877 11.660 1.00 5.17 ? 16 DA B N9 1 ATOM 313 C C8 . DA B 1 6 ? -4.420 -1.457 12.858 1.00 3.56 ? 16 DA B C8 1 ATOM 314 N N7 . DA B 1 6 ? -4.096 -2.726 12.761 1.00 3.22 ? 16 DA B N7 1 ATOM 315 C C5 . DA B 1 6 ? -4.224 -3.001 11.408 1.00 3.16 ? 16 DA B C5 1 ATOM 316 C C6 . DA B 1 6 ? -4.038 -4.178 10.649 1.00 3.03 ? 16 DA B C6 1 ATOM 317 N N6 . DA B 1 6 ? -3.627 -5.342 11.155 1.00 1.00 ? 16 DA B N6 1 ATOM 318 N N1 . DA B 1 6 ? -4.291 -4.111 9.324 1.00 4.40 ? 16 DA B N1 1 ATOM 319 C C2 . DA B 1 6 ? -4.694 -2.951 8.805 1.00 3.18 ? 16 DA B C2 1 ATOM 320 N N3 . DA B 1 6 ? -4.891 -1.780 9.407 1.00 3.37 ? 16 DA B N3 1 ATOM 321 C C4 . DA B 1 6 ? -4.637 -1.874 10.721 1.00 4.42 ? 16 DA B C4 1 ATOM 322 P P . DC B 1 7 ? -7.635 4.128 11.442 1.00 15.87 ? 17 DC B P 1 ATOM 323 O OP1 . DC B 1 7 ? -8.097 4.757 10.182 1.00 18.09 ? 17 DC B OP1 1 ATOM 324 O OP2 . DC B 1 7 ? -7.247 4.979 12.594 1.00 13.85 ? 17 DC B OP2 1 ATOM 325 O "O5'" . DC B 1 7 ? -8.713 3.066 11.941 1.00 20.13 ? 17 DC B "O5'" 1 ATOM 326 C "C5'" . DC B 1 7 ? -9.744 2.598 11.076 1.00 18.46 ? 17 DC B "C5'" 1 ATOM 327 C "C4'" . DC B 1 7 ? -9.156 2.065 9.789 1.00 18.57 ? 17 DC B "C4'" 1 ATOM 328 O "O4'" . DC B 1 7 ? -8.187 1.027 10.077 1.00 16.30 ? 17 DC B "O4'" 1 ATOM 329 C "C3'" . DC B 1 7 ? -10.201 1.430 8.873 1.00 16.60 ? 17 DC B "C3'" 1 ATOM 330 O "O3'" . DC B 1 7 ? -9.993 1.794 7.510 1.00 18.29 ? 17 DC B "O3'" 1 ATOM 331 C "C2'" . DC B 1 7 ? -9.991 -0.056 9.060 1.00 16.30 ? 17 DC B "C2'" 1 ATOM 332 C "C1'" . DC B 1 7 ? -8.511 -0.140 9.345 1.00 15.04 ? 17 DC B "C1'" 1 ATOM 333 N N1 . DC B 1 7 ? -8.137 -1.307 10.153 1.00 13.93 ? 17 DC B N1 1 ATOM 334 C C2 . DC B 1 7 ? -7.963 -2.523 9.505 1.00 14.47 ? 17 DC B C2 1 ATOM 335 O O2 . DC B 1 7 ? -8.170 -2.578 8.287 1.00 15.08 ? 17 DC B O2 1 ATOM 336 N N3 . DC B 1 7 ? -7.580 -3.609 10.217 1.00 13.11 ? 17 DC B N3 1 ATOM 337 C C4 . DC B 1 7 ? -7.386 -3.509 11.532 1.00 12.29 ? 17 DC B C4 1 ATOM 338 N N4 . DC B 1 7 ? -6.997 -4.605 12.189 1.00 8.06 ? 17 DC B N4 1 ATOM 339 C C5 . DC B 1 7 ? -7.580 -2.279 12.230 1.00 11.50 ? 17 DC B C5 1 ATOM 340 C C6 . DC B 1 7 ? -7.954 -1.211 11.505 1.00 14.58 ? 17 DC B C6 1 HETATM 341 N N1 . BRU B 1 8 ? -12.551 -3.110 7.965 1.00 15.66 ? 18 BRU B N1 1 HETATM 342 C C2 . BRU B 1 8 ? -12.000 -4.367 8.142 1.00 13.68 ? 18 BRU B C2 1 HETATM 343 N N3 . BRU B 1 8 ? -11.430 -4.582 9.369 1.00 13.97 ? 18 BRU B N3 1 HETATM 344 C C4 . BRU B 1 8 ? -11.360 -3.687 10.412 1.00 13.22 ? 18 BRU B C4 1 HETATM 345 C C5 . BRU B 1 8 ? -11.990 -2.428 10.160 1.00 14.05 ? 18 BRU B C5 1 HETATM 346 C C6 . BRU B 1 8 ? -12.549 -2.186 8.977 1.00 11.09 ? 18 BRU B C6 1 HETATM 347 O O2 . BRU B 1 8 ? -12.021 -5.221 7.282 1.00 12.90 ? 18 BRU B O2 1 HETATM 348 O O4 . BRU B 1 8 ? -10.673 -3.959 11.388 1.00 14.58 ? 18 BRU B O4 1 HETATM 349 BR BR . BRU B 1 8 ? -11.977 -1.233 11.541 1.00 12.40 ? 18 BRU B BR 1 HETATM 350 C "C1'" . BRU B 1 8 ? -13.113 -2.803 6.646 1.00 13.04 ? 18 BRU B "C1'" 1 HETATM 351 C "C2'" . BRU B 1 8 ? -14.075 -1.631 6.615 1.00 12.51 ? 18 BRU B "C2'" 1 HETATM 352 C "C3'" . BRU B 1 8 ? -13.904 -1.125 5.194 1.00 14.55 ? 18 BRU B "C3'" 1 HETATM 353 C "C4'" . BRU B 1 8 ? -12.424 -1.379 4.917 1.00 15.92 ? 18 BRU B "C4'" 1 HETATM 354 O "O3'" . BRU B 1 8 ? -14.679 -1.914 4.288 1.00 12.38 ? 18 BRU B "O3'" 1 HETATM 355 O "O4'" . BRU B 1 8 ? -12.029 -2.439 5.815 1.00 15.77 ? 18 BRU B "O4'" 1 HETATM 356 C "C5'" . BRU B 1 8 ? -11.514 -0.182 5.075 1.00 16.20 ? 18 BRU B "C5'" 1 HETATM 357 O "O5'" . BRU B 1 8 ? -11.777 0.485 6.307 1.00 17.24 ? 18 BRU B "O5'" 1 HETATM 358 P P . BRU B 1 8 ? -11.269 1.976 6.547 1.00 19.71 ? 18 BRU B P 1 HETATM 359 O OP1 . BRU B 1 8 ? -10.793 2.535 5.255 1.00 17.98 ? 18 BRU B OP1 1 HETATM 360 O OP2 . BRU B 1 8 ? -12.313 2.695 7.321 1.00 14.96 ? 18 BRU B OP2 1 ATOM 361 P P . DG B 1 9 ? -15.254 -1.246 2.938 1.00 6.40 ? 19 DG B P 1 ATOM 362 O OP1 . DG B 1 9 ? -14.235 -0.326 2.388 1.00 9.60 ? 19 DG B OP1 1 ATOM 363 O OP2 . DG B 1 9 ? -16.610 -0.734 3.246 1.00 11.00 ? 19 DG B OP2 1 ATOM 364 O "O5'" . DG B 1 9 ? -15.372 -2.472 1.935 1.00 11.43 ? 19 DG B "O5'" 1 ATOM 365 C "C5'" . DG B 1 9 ? -14.206 -3.070 1.367 1.00 10.56 ? 19 DG B "C5'" 1 ATOM 366 C "C4'" . DG B 1 9 ? -14.241 -4.569 1.559 1.00 8.86 ? 19 DG B "C4'" 1 ATOM 367 O "O4'" . DG B 1 9 ? -14.176 -4.856 2.969 1.00 11.16 ? 19 DG B "O4'" 1 ATOM 368 C "C3'" . DG B 1 9 ? -15.512 -5.262 1.076 1.00 8.45 ? 19 DG B "C3'" 1 ATOM 369 O "O3'" . DG B 1 9 ? -15.213 -6.613 0.692 1.00 6.09 ? 19 DG B "O3'" 1 ATOM 370 C "C2'" . DG B 1 9 ? -16.379 -5.268 2.319 1.00 8.61 ? 19 DG B "C2'" 1 ATOM 371 C "C1'" . DG B 1 9 ? -15.343 -5.556 3.374 1.00 7.93 ? 19 DG B "C1'" 1 ATOM 372 N N9 . DG B 1 9 ? -15.651 -5.131 4.731 1.00 9.24 ? 19 DG B N9 1 ATOM 373 C C8 . DG B 1 9 ? -16.393 -4.048 5.141 1.00 6.55 ? 19 DG B C8 1 ATOM 374 N N7 . DG B 1 9 ? -16.386 -3.892 6.435 1.00 6.69 ? 19 DG B N7 1 ATOM 375 C C5 . DG B 1 9 ? -15.604 -4.943 6.901 1.00 6.57 ? 19 DG B C5 1 ATOM 376 C C6 . DG B 1 9 ? -15.202 -5.282 8.214 1.00 3.65 ? 19 DG B C6 1 ATOM 377 O O6 . DG B 1 9 ? -15.420 -4.685 9.256 1.00 4.28 ? 19 DG B O6 1 ATOM 378 N N1 . DG B 1 9 ? -14.445 -6.443 8.235 1.00 6.00 ? 19 DG B N1 1 ATOM 379 C C2 . DG B 1 9 ? -14.096 -7.177 7.134 1.00 6.29 ? 19 DG B C2 1 ATOM 380 N N2 . DG B 1 9 ? -13.369 -8.286 7.361 1.00 7.28 ? 19 DG B N2 1 ATOM 381 N N3 . DG B 1 9 ? -14.433 -6.855 5.904 1.00 7.27 ? 19 DG B N3 1 ATOM 382 C C4 . DG B 1 9 ? -15.183 -5.734 5.863 1.00 7.46 ? 19 DG B C4 1 ATOM 383 P P . DG B 1 10 ? -16.141 -7.350 -0.390 1.00 6.45 ? 20 DG B P 1 ATOM 384 O OP1 . DG B 1 10 ? -15.449 -7.272 -1.705 1.00 6.28 ? 20 DG B OP1 1 ATOM 385 O OP2 . DG B 1 10 ? -17.492 -6.755 -0.229 1.00 6.74 ? 20 DG B OP2 1 ATOM 386 O "O5'" . DG B 1 10 ? -16.175 -8.879 0.062 1.00 7.00 ? 20 DG B "O5'" 1 ATOM 387 C "C5'" . DG B 1 10 ? -15.002 -9.690 0.008 1.00 7.22 ? 20 DG B "C5'" 1 ATOM 388 C "C4'" . DG B 1 10 ? -15.099 -10.815 1.011 1.00 10.19 ? 20 DG B "C4'" 1 ATOM 389 O "O4'" . DG B 1 10 ? -15.320 -10.219 2.314 1.00 9.14 ? 20 DG B "O4'" 1 ATOM 390 C "C3'" . DG B 1 10 ? -16.277 -11.765 0.791 1.00 9.49 ? 20 DG B "C3'" 1 ATOM 391 O "O3'" . DG B 1 10 ? -16.019 -13.058 1.349 1.00 6.30 ? 20 DG B "O3'" 1 ATOM 392 C "C2'" . DG B 1 10 ? -17.376 -11.129 1.623 1.00 8.69 ? 20 DG B "C2'" 1 ATOM 393 C "C1'" . DG B 1 10 ? -16.602 -10.581 2.812 1.00 9.09 ? 20 DG B "C1'" 1 ATOM 394 N N9 . DG B 1 10 ? -17.197 -9.395 3.420 1.00 11.29 ? 20 DG B N9 1 ATOM 395 C C8 . DG B 1 10 ? -17.834 -8.371 2.767 1.00 9.98 ? 20 DG B C8 1 ATOM 396 N N7 . DG B 1 10 ? -18.278 -7.448 3.572 1.00 13.11 ? 20 DG B N7 1 ATOM 397 C C5 . DG B 1 10 ? -17.910 -7.885 4.837 1.00 12.97 ? 20 DG B C5 1 ATOM 398 C C6 . DG B 1 10 ? -18.118 -7.292 6.122 1.00 12.98 ? 20 DG B C6 1 ATOM 399 O O6 . DG B 1 10 ? -18.684 -6.222 6.402 1.00 11.29 ? 20 DG B O6 1 ATOM 400 N N1 . DG B 1 10 ? -17.579 -8.076 7.137 1.00 11.42 ? 20 DG B N1 1 ATOM 401 C C2 . DG B 1 10 ? -16.923 -9.265 6.948 1.00 12.08 ? 20 DG B C2 1 ATOM 402 N N2 . DG B 1 10 ? -16.476 -9.870 8.049 1.00 12.50 ? 20 DG B N2 1 ATOM 403 N N3 . DG B 1 10 ? -16.719 -9.822 5.765 1.00 13.97 ? 20 DG B N3 1 ATOM 404 C C4 . DG B 1 10 ? -17.236 -9.084 4.761 1.00 12.32 ? 20 DG B C4 1 HETATM 405 NA NA . NA C 2 . ? 0.010 -4.498 0.004 0.50 6.08 ? 37 NA A NA 1 HETATM 406 CA CA . CA D 3 . ? -7.913 0.016 -15.694 1.00 14.61 ? 67 CA A CA 1 HETATM 407 O O . HOH E 4 . ? -9.813 -5.892 3.381 1.00 1.00 ? 21 HOH A O 1 HETATM 408 O O . HOH E 4 . ? -17.895 -11.408 11.587 1.00 9.24 ? 23 HOH A O 1 HETATM 409 O O . HOH E 4 . ? -0.979 6.803 -11.791 1.00 20.80 ? 24 HOH A O 1 HETATM 410 O O . HOH E 4 . ? -18.661 -12.871 13.876 1.00 8.16 ? 25 HOH A O 1 HETATM 411 O O . HOH E 4 . ? -5.586 -3.031 -3.579 1.00 1.00 ? 26 HOH A O 1 HETATM 412 O O . HOH E 4 . ? -6.955 1.999 -15.020 1.00 10.45 ? 27 HOH A O 1 HETATM 413 O O . HOH E 4 . ? -2.884 3.063 -11.901 1.00 24.88 ? 29 HOH A O 1 HETATM 414 O O . HOH E 4 . ? -11.423 -9.047 18.578 1.00 31.93 ? 30 HOH A O 1 HETATM 415 O O . HOH E 4 . ? -1.067 -8.585 11.030 1.00 14.51 ? 32 HOH A O 1 HETATM 416 O O . HOH E 4 . ? -4.864 -14.307 2.394 1.00 16.17 ? 33 HOH A O 1 HETATM 417 O O . HOH E 4 . ? -4.117 -9.928 16.109 1.00 21.15 ? 34 HOH A O 1 HETATM 418 O O . HOH E 4 . ? -11.565 -14.300 16.853 1.00 1.88 ? 36 HOH A O 1 HETATM 419 O O . HOH E 4 . ? -4.815 -12.301 -2.390 1.00 13.40 ? 38 HOH A O 1 HETATM 420 O O . HOH E 4 . ? -8.302 -6.326 1.436 1.00 5.43 ? 39 HOH A O 1 HETATM 421 O O . HOH E 4 . ? -8.040 7.215 -7.564 1.00 1.00 ? 40 HOH A O 1 HETATM 422 O O . HOH E 4 . ? -5.030 -12.465 13.297 1.00 9.96 ? 42 HOH A O 1 HETATM 423 O O . HOH E 4 . ? -14.635 -8.482 19.080 1.00 8.73 ? 43 HOH A O 1 HETATM 424 O O . HOH E 4 . ? -5.689 3.606 -18.598 1.00 5.65 ? 44 HOH A O 1 HETATM 425 O O . HOH E 4 . ? -5.613 -0.042 3.281 1.00 30.83 ? 46 HOH A O 1 HETATM 426 O O . HOH E 4 . ? -9.052 -17.296 5.157 1.00 7.70 ? 50 HOH A O 1 HETATM 427 O O . HOH E 4 . ? -7.179 -12.862 -0.852 1.00 1.00 ? 52 HOH A O 1 HETATM 428 O O . HOH E 4 . ? -1.540 -10.662 14.924 1.00 16.22 ? 53 HOH A O 1 HETATM 429 O O . HOH E 4 . ? -10.674 7.909 -8.987 1.00 19.96 ? 54 HOH A O 1 HETATM 430 O O . HOH E 4 . ? -7.422 -1.197 1.468 1.00 15.69 ? 55 HOH A O 1 HETATM 431 O O . HOH E 4 . ? -9.946 -15.023 6.048 1.00 23.68 ? 57 HOH A O 1 HETATM 432 O O . HOH E 4 . ? -10.315 -10.795 2.625 1.00 13.56 ? 61 HOH A O 1 HETATM 433 O O . HOH E 4 . ? -8.852 -3.238 4.515 1.00 21.89 ? 62 HOH A O 1 HETATM 434 O O . HOH E 4 . ? -7.384 3.964 -5.524 1.00 16.50 ? 64 HOH A O 1 HETATM 435 O O . HOH E 4 . ? -4.794 7.752 -5.709 1.00 32.71 ? 65 HOH A O 1 HETATM 436 O O . HOH E 4 . ? -3.114 -11.070 4.258 1.00 1.47 ? 66 HOH A O 1 HETATM 437 O O . HOH E 4 . ? 0.000 3.995 0.000 0.5 1.00 ? 68 HOH A O 1 HETATM 438 O O . HOH E 4 . ? -11.779 -7.497 1.248 1.00 21.57 ? 70 HOH A O 1 HETATM 439 O O . HOH E 4 . ? -7.951 -11.100 15.462 1.00 21.69 ? 72 HOH A O 1 HETATM 440 O O . HOH E 4 . ? -8.694 2.076 0.359 1.00 13.71 ? 73 HOH A O 1 HETATM 441 O O . HOH E 4 . ? -2.612 7.951 -4.008 1.00 16.75 ? 76 HOH A O 1 HETATM 442 O O . HOH E 4 . ? -4.414 4.348 -3.608 1.00 9.15 ? 77 HOH A O 1 HETATM 443 O O . HOH E 4 . ? -11.803 10.141 -9.076 1.00 9.89 ? 79 HOH A O 1 HETATM 444 O O . HOH E 4 . ? -9.625 0.685 -14.349 1.00 14.17 ? 80 HOH A O 1 HETATM 445 O O . HOH E 4 . ? -9.533 0.540 -17.153 1.00 6.89 ? 81 HOH A O 1 HETATM 446 O O . HOH E 4 . ? -5.076 0.030 -16.496 1.00 17.45 ? 82 HOH A O 1 HETATM 447 O O . HOH E 4 . ? -18.381 -12.803 16.466 1.00 25.44 ? 85 HOH A O 1 HETATM 448 O O . HOH E 4 . ? -5.494 -13.470 18.224 0.5 24.14 ? 86 HOH A O 1 HETATM 449 O O . HOH E 4 . ? -12.521 -16.195 6.701 1.00 24.95 ? 87 HOH A O 1 HETATM 450 O O . HOH E 4 . ? -12.552 -1.935 14.990 1.00 29.23 ? 88 HOH A O 1 HETATM 451 O O . HOH E 4 . ? -6.424 -0.371 -1.429 1.00 15.02 ? 90 HOH A O 1 HETATM 452 O O . HOH E 4 . ? -10.084 -17.296 7.434 1.00 19.57 ? 96 HOH A O 1 HETATM 453 O O . HOH E 4 . ? -10.062 -11.460 17.234 1.00 23.57 ? 100 HOH A O 1 HETATM 454 O O . HOH E 4 . ? -1.493 -6.382 -3.198 1.00 19.64 ? 101 HOH A O 1 HETATM 455 O O . HOH E 4 . ? 1.842 3.095 -5.262 1.00 21.33 ? 103 HOH A O 1 HETATM 456 O O . HOH E 4 . ? -16.068 -13.050 13.299 1.00 16.85 ? 107 HOH A O 1 HETATM 457 O O . HOH F 4 . ? -14.271 -12.319 3.223 1.00 13.35 ? 22 HOH B O 1 HETATM 458 O O . HOH F 4 . ? -13.204 1.746 9.390 1.00 10.62 ? 28 HOH B O 1 HETATM 459 O O . HOH F 4 . ? 8.959 -9.273 6.957 1.00 15.26 ? 31 HOH B O 1 HETATM 460 O O . HOH F 4 . ? -5.898 7.450 11.453 1.00 25.91 ? 35 HOH B O 1 HETATM 461 O O . HOH F 4 . ? 14.272 -9.899 16.685 1.00 25.42 ? 41 HOH B O 1 HETATM 462 O O . HOH F 4 . ? -1.389 4.785 17.300 1.00 1.00 ? 45 HOH B O 1 HETATM 463 O O . HOH F 4 . ? 9.075 -4.775 11.014 1.00 2.82 ? 47 HOH B O 1 HETATM 464 O O . HOH F 4 . ? -12.236 -5.291 4.230 1.00 1.00 ? 48 HOH B O 1 HETATM 465 O O . HOH F 4 . ? -14.344 1.635 6.484 1.00 6.15 ? 49 HOH B O 1 HETATM 466 O O . HOH F 4 . ? 4.058 -0.555 13.043 1.00 1.00 ? 51 HOH B O 1 HETATM 467 O O . HOH F 4 . ? -18.008 -1.129 7.572 1.00 7.68 ? 56 HOH B O 1 HETATM 468 O O . HOH F 4 . ? -0.993 2.321 18.941 1.00 5.03 ? 58 HOH B O 1 HETATM 469 O O . HOH F 4 . ? 5.848 -6.645 5.743 1.00 6.84 ? 59 HOH B O 1 HETATM 470 O O . HOH F 4 . ? -14.943 0.057 9.117 1.00 31.85 ? 60 HOH B O 1 HETATM 471 O O . HOH F 4 . ? 13.592 -8.440 11.379 1.00 21.48 ? 63 HOH B O 1 HETATM 472 O O . HOH F 4 . ? 7.217 -2.237 17.736 1.00 8.08 ? 69 HOH B O 1 HETATM 473 O O . HOH F 4 . ? -3.504 2.888 18.602 1.00 1.00 ? 71 HOH B O 1 HETATM 474 O O . HOH F 4 . ? -4.545 2.935 7.519 1.00 22.51 ? 74 HOH B O 1 HETATM 475 O O . HOH F 4 . ? 6.332 -1.475 13.610 1.00 23.44 ? 75 HOH B O 1 HETATM 476 O O . HOH F 4 . ? -11.957 3.807 12.895 1.00 29.46 ? 78 HOH B O 1 HETATM 477 O O . HOH F 4 . ? 1.267 -9.808 7.896 1.00 8.11 ? 83 HOH B O 1 HETATM 478 O O . HOH F 4 . ? -6.028 5.945 9.343 1.00 25.94 ? 84 HOH B O 1 HETATM 479 O O . HOH F 4 . ? -11.313 0.631 14.542 1.00 5.51 ? 89 HOH B O 1 HETATM 480 O O . HOH F 4 . ? 1.296 2.637 18.489 1.00 18.29 ? 91 HOH B O 1 HETATM 481 O O . HOH F 4 . ? 3.719 -9.533 8.711 1.00 25.71 ? 92 HOH B O 1 HETATM 482 O O . HOH F 4 . ? 8.700 -3.091 15.095 1.00 25.17 ? 93 HOH B O 1 HETATM 483 O O . HOH F 4 . ? 15.800 -10.365 12.029 1.00 24.55 ? 94 HOH B O 1 HETATM 484 O O . HOH F 4 . ? -17.747 1.814 8.803 1.00 14.76 ? 95 HOH B O 1 HETATM 485 O O . HOH F 4 . ? -7.098 -1.293 16.064 1.00 21.41 ? 97 HOH B O 1 HETATM 486 O O . HOH F 4 . ? 3.241 -8.055 10.699 1.00 18.91 ? 98 HOH B O 1 HETATM 487 O O . HOH F 4 . ? 8.975 1.891 3.311 1.00 25.57 ? 99 HOH B O 1 HETATM 488 O O . HOH F 4 . ? -2.804 4.291 20.499 1.00 16.85 ? 102 HOH B O 1 HETATM 489 O O . HOH F 4 . ? -15.329 3.584 5.713 1.00 17.68 ? 104 HOH B O 1 HETATM 490 O O . HOH F 4 . ? -8.650 -4.941 14.951 1.00 21.16 ? 105 HOH B O 1 HETATM 491 O O . HOH F 4 . ? 12.355 -8.099 16.089 1.00 18.17 ? 106 HOH B O 1 HETATM 492 O O . HOH F 4 . ? 15.515 -13.679 14.201 1.00 14.03 ? 108 HOH B O 1 HETATM 493 O O . HOH F 4 . ? 10.945 -5.357 16.313 1.00 17.25 ? 109 HOH B O 1 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C A . n A 1 2 DC 2 2 2 DC C A . n A 1 3 DA 3 3 3 DA A A . n A 1 4 DG 4 4 4 DG G A . n A 1 5 DT 5 5 5 DT T A . n A 1 6 DA 6 6 6 DA A A . n A 1 7 DC 7 7 7 DC C A . n A 1 8 BRU 8 8 8 BRU +U A . n A 1 9 DG 9 9 9 DG G A . n A 1 10 DG 10 10 10 DG G A . n B 1 1 DC 1 11 11 DC C B . n B 1 2 DC 2 12 12 DC C B . n B 1 3 DA 3 13 13 DA A B . n B 1 4 DG 4 14 14 DG G B . n B 1 5 DT 5 15 15 DT T B . n B 1 6 DA 6 16 16 DA A B . n B 1 7 DC 7 17 17 DC C B . n B 1 8 BRU 8 18 18 BRU +U B . n B 1 9 DG 9 19 19 DG G B . n B 1 10 DG 10 20 20 DG G B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NA 1 37 37 NA NA A . D 3 CA 1 67 67 CA CA A . E 4 HOH 1 21 21 HOH HOH A . E 4 HOH 2 23 23 HOH HOH A . E 4 HOH 3 24 24 HOH HOH A . E 4 HOH 4 25 25 HOH HOH A . E 4 HOH 5 26 26 HOH HOH A . E 4 HOH 6 27 27 HOH HOH A . E 4 HOH 7 29 29 HOH HOH A . E 4 HOH 8 30 30 HOH HOH A . E 4 HOH 9 32 32 HOH HOH A . E 4 HOH 10 33 33 HOH HOH A . E 4 HOH 11 34 34 HOH HOH A . E 4 HOH 12 36 36 HOH HOH A . E 4 HOH 13 38 38 HOH HOH A . E 4 HOH 14 39 39 HOH HOH A . E 4 HOH 15 40 40 HOH HOH A . E 4 HOH 16 42 42 HOH HOH A . E 4 HOH 17 43 43 HOH HOH A . E 4 HOH 18 44 44 HOH HOH A . E 4 HOH 19 46 46 HOH HOH A . E 4 HOH 20 50 50 HOH HOH A . E 4 HOH 21 52 52 HOH HOH A . E 4 HOH 22 53 53 HOH HOH A . E 4 HOH 23 54 54 HOH HOH A . E 4 HOH 24 55 55 HOH HOH A . E 4 HOH 25 57 57 HOH HOH A . E 4 HOH 26 61 61 HOH HOH A . E 4 HOH 27 62 62 HOH HOH A . E 4 HOH 28 64 64 HOH HOH A . E 4 HOH 29 65 65 HOH HOH A . E 4 HOH 30 66 66 HOH HOH A . E 4 HOH 31 68 68 HOH HOH A . E 4 HOH 32 70 70 HOH HOH A . E 4 HOH 33 72 72 HOH HOH A . E 4 HOH 34 73 73 HOH HOH A . E 4 HOH 35 76 76 HOH HOH A . E 4 HOH 36 77 77 HOH HOH A . E 4 HOH 37 79 79 HOH HOH A . E 4 HOH 38 80 80 HOH HOH A . E 4 HOH 39 81 81 HOH HOH A . E 4 HOH 40 82 82 HOH HOH A . E 4 HOH 41 85 85 HOH HOH A . E 4 HOH 42 86 86 HOH HOH A . E 4 HOH 43 87 87 HOH HOH A . E 4 HOH 44 88 88 HOH HOH A . E 4 HOH 45 90 90 HOH HOH A . E 4 HOH 46 96 96 HOH HOH A . E 4 HOH 47 100 100 HOH HOH A . E 4 HOH 48 101 101 HOH HOH A . E 4 HOH 49 103 103 HOH HOH A . E 4 HOH 50 107 107 HOH HOH A . F 4 HOH 1 22 22 HOH HOH B . F 4 HOH 2 28 28 HOH HOH B . F 4 HOH 3 31 31 HOH HOH B . F 4 HOH 4 35 35 HOH HOH B . F 4 HOH 5 41 41 HOH HOH B . F 4 HOH 6 45 45 HOH HOH B . F 4 HOH 7 47 47 HOH HOH B . F 4 HOH 8 48 48 HOH HOH B . F 4 HOH 9 49 49 HOH HOH B . F 4 HOH 10 51 51 HOH HOH B . F 4 HOH 11 56 56 HOH HOH B . F 4 HOH 12 58 58 HOH HOH B . F 4 HOH 13 59 59 HOH HOH B . F 4 HOH 14 60 60 HOH HOH B . F 4 HOH 15 63 63 HOH HOH B . F 4 HOH 16 69 69 HOH HOH B . F 4 HOH 17 71 71 HOH HOH B . F 4 HOH 18 74 74 HOH HOH B . F 4 HOH 19 75 75 HOH HOH B . F 4 HOH 20 78 78 HOH HOH B . F 4 HOH 21 83 83 HOH HOH B . F 4 HOH 22 84 84 HOH HOH B . F 4 HOH 23 89 89 HOH HOH B . F 4 HOH 24 91 91 HOH HOH B . F 4 HOH 25 92 92 HOH HOH B . F 4 HOH 26 93 93 HOH HOH B . F 4 HOH 27 94 94 HOH HOH B . F 4 HOH 28 95 95 HOH HOH B . F 4 HOH 29 97 97 HOH HOH B . F 4 HOH 30 98 98 HOH HOH B . F 4 HOH 31 99 99 HOH HOH B . F 4 HOH 32 102 102 HOH HOH B . F 4 HOH 33 104 104 HOH HOH B . F 4 HOH 34 105 105 HOH HOH B . F 4 HOH 35 106 106 HOH HOH B . F 4 HOH 36 108 108 HOH HOH B . F 4 HOH 37 109 109 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A BRU 8 A BRU 8 ? DU ? 2 B BRU 8 B BRU 18 ? DU ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A NA 37 ? C NA . 2 1 A HOH 68 ? E HOH . 3 1 A HOH 86 ? E HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? E HOH . ? A HOH 27 ? 1_555 CA ? D CA . ? A CA 67 ? 1_555 O ? E HOH . ? A HOH 80 ? 1_555 83.5 ? 2 O ? E HOH . ? A HOH 27 ? 1_555 CA ? D CA . ? A CA 67 ? 1_555 O ? E HOH . ? A HOH 81 ? 1_555 106.8 ? 3 O ? E HOH . ? A HOH 80 ? 1_555 CA ? D CA . ? A CA 67 ? 1_555 O ? E HOH . ? A HOH 81 ? 1_555 76.9 ? 4 O ? E HOH . ? A HOH 27 ? 1_555 CA ? D CA . ? A CA 67 ? 1_555 O ? E HOH . ? A HOH 82 ? 1_555 71.0 ? 5 O ? E HOH . ? A HOH 80 ? 1_555 CA ? D CA . ? A CA 67 ? 1_555 O ? E HOH . ? A HOH 82 ? 1_555 152.0 ? 6 O ? E HOH . ? A HOH 81 ? 1_555 CA ? D CA . ? A CA 67 ? 1_555 O ? E HOH . ? A HOH 82 ? 1_555 121.1 ? 7 O ? E HOH . ? A HOH 27 ? 1_555 CA ? D CA . ? A CA 67 ? 1_555 O ? F HOH . ? B HOH 69 ? 2_555 136.1 ? 8 O ? E HOH . ? A HOH 80 ? 1_555 CA ? D CA . ? A CA 67 ? 1_555 O ? F HOH . ? B HOH 69 ? 2_555 140.0 ? 9 O ? E HOH . ? A HOH 81 ? 1_555 CA ? D CA . ? A CA 67 ? 1_555 O ? F HOH . ? B HOH 69 ? 2_555 84.5 ? 10 O ? E HOH . ? A HOH 82 ? 1_555 CA ? D CA . ? A CA 67 ? 1_555 O ? F HOH . ? B HOH 69 ? 2_555 67.1 ? 11 O ? E HOH . ? A HOH 27 ? 1_555 CA ? D CA . ? A CA 67 ? 1_555 O ? F HOH . ? B HOH 75 ? 2_555 90.3 ? 12 O ? E HOH . ? A HOH 80 ? 1_555 CA ? D CA . ? A CA 67 ? 1_555 O ? F HOH . ? B HOH 75 ? 2_555 97.6 ? 13 O ? E HOH . ? A HOH 81 ? 1_555 CA ? D CA . ? A CA 67 ? 1_555 O ? F HOH . ? B HOH 75 ? 2_555 161.0 ? 14 O ? E HOH . ? A HOH 82 ? 1_555 CA ? D CA . ? A CA 67 ? 1_555 O ? F HOH . ? B HOH 75 ? 2_555 71.7 ? 15 O ? F HOH . ? B HOH 69 ? 2_555 CA ? D CA . ? A CA 67 ? 1_555 O ? F HOH . ? B HOH 75 ? 2_555 88.8 ? 16 O ? E HOH . ? A HOH 27 ? 1_555 CA ? D CA . ? A CA 67 ? 1_555 O ? F HOH . ? B HOH 93 ? 2_555 150.1 ? 17 O ? E HOH . ? A HOH 80 ? 1_555 CA ? D CA . ? A CA 67 ? 1_555 O ? F HOH . ? B HOH 93 ? 2_555 89.4 ? 18 O ? E HOH . ? A HOH 81 ? 1_555 CA ? D CA . ? A CA 67 ? 1_555 O ? F HOH . ? B HOH 93 ? 2_555 99.7 ? 19 O ? E HOH . ? A HOH 82 ? 1_555 CA ? D CA . ? A CA 67 ? 1_555 O ? F HOH . ? B HOH 93 ? 2_555 106.7 ? 20 O ? F HOH . ? B HOH 69 ? 2_555 CA ? D CA . ? A CA 67 ? 1_555 O ? F HOH . ? B HOH 93 ? 2_555 59.1 ? 21 O ? F HOH . ? B HOH 75 ? 2_555 CA ? D CA . ? A CA 67 ? 1_555 O ? F HOH . ? B HOH 93 ? 2_555 61.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-09-02 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2011-11-16 5 'Structure model' 1 4 2023-08-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' pdbx_initial_refinement_model 5 5 'Structure model' pdbx_struct_conn_angle 6 5 'Structure model' struct_conn 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 4 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 5 5 'Structure model' '_pdbx_struct_conn_angle.value' 6 5 'Structure model' '_struct_conn.conn_type_id' 7 5 'Structure model' '_struct_conn.id' 8 5 'Structure model' '_struct_conn.pdbx_dist_value' 9 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 10 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 11 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 12 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 13 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 14 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 15 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 16 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 17 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 18 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 19 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 20 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 21 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 22 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 23 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 24 5 'Structure model' '_struct_conn.ptnr2_symmetry' 25 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 26 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 27 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 EPMR phasing . ? 3 CNS refinement 1.0 ? 4 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id DG _pdbx_validate_planes.auth_asym_id B _pdbx_validate_planes.auth_seq_id 19 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.054 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal BRU N1 N N N 1 BRU C2 C N N 2 BRU N3 N N N 3 BRU C4 C N N 4 BRU C5 C N N 5 BRU C6 C N N 6 BRU O2 O N N 7 BRU O4 O N N 8 BRU BR BR N N 9 BRU "C1'" C N R 10 BRU "C2'" C N N 11 BRU "C3'" C N S 12 BRU "C4'" C N R 13 BRU "O3'" O N N 14 BRU "O4'" O N N 15 BRU "C5'" C N N 16 BRU "O5'" O N N 17 BRU P P N N 18 BRU OP1 O N N 19 BRU OP2 O N N 20 BRU OP3 O N N 21 BRU HN3 H N N 22 BRU H6 H N N 23 BRU "H1'" H N N 24 BRU "H2'" H N N 25 BRU "H2''" H N N 26 BRU "H3'" H N N 27 BRU "H4'" H N N 28 BRU "HO3'" H N N 29 BRU "H5'" H N N 30 BRU "H5''" H N N 31 BRU HOP2 H N N 32 BRU HOP3 H N N 33 CA CA CA N N 34 DA OP3 O N N 35 DA P P N N 36 DA OP1 O N N 37 DA OP2 O N N 38 DA "O5'" O N N 39 DA "C5'" C N N 40 DA "C4'" C N R 41 DA "O4'" O N N 42 DA "C3'" C N S 43 DA "O3'" O N N 44 DA "C2'" C N N 45 DA "C1'" C N R 46 DA N9 N Y N 47 DA C8 C Y N 48 DA N7 N Y N 49 DA C5 C Y N 50 DA C6 C Y N 51 DA N6 N N N 52 DA N1 N Y N 53 DA C2 C Y N 54 DA N3 N Y N 55 DA C4 C Y N 56 DA HOP3 H N N 57 DA HOP2 H N N 58 DA "H5'" H N N 59 DA "H5''" H N N 60 DA "H4'" H N N 61 DA "H3'" H N N 62 DA "HO3'" H N N 63 DA "H2'" H N N 64 DA "H2''" H N N 65 DA "H1'" H N N 66 DA H8 H N N 67 DA H61 H N N 68 DA H62 H N N 69 DA H2 H N N 70 DC OP3 O N N 71 DC P P N N 72 DC OP1 O N N 73 DC OP2 O N N 74 DC "O5'" O N N 75 DC "C5'" C N N 76 DC "C4'" C N R 77 DC "O4'" O N N 78 DC "C3'" C N S 79 DC "O3'" O N N 80 DC "C2'" C N N 81 DC "C1'" C N R 82 DC N1 N N N 83 DC C2 C N N 84 DC O2 O N N 85 DC N3 N N N 86 DC C4 C N N 87 DC N4 N N N 88 DC C5 C N N 89 DC C6 C N N 90 DC HOP3 H N N 91 DC HOP2 H N N 92 DC "H5'" H N N 93 DC "H5''" H N N 94 DC "H4'" H N N 95 DC "H3'" H N N 96 DC "HO3'" H N N 97 DC "H2'" H N N 98 DC "H2''" H N N 99 DC "H1'" H N N 100 DC H41 H N N 101 DC H42 H N N 102 DC H5 H N N 103 DC H6 H N N 104 DG OP3 O N N 105 DG P P N N 106 DG OP1 O N N 107 DG OP2 O N N 108 DG "O5'" O N N 109 DG "C5'" C N N 110 DG "C4'" C N R 111 DG "O4'" O N N 112 DG "C3'" C N S 113 DG "O3'" O N N 114 DG "C2'" C N N 115 DG "C1'" C N R 116 DG N9 N Y N 117 DG C8 C Y N 118 DG N7 N Y N 119 DG C5 C Y N 120 DG C6 C N N 121 DG O6 O N N 122 DG N1 N N N 123 DG C2 C N N 124 DG N2 N N N 125 DG N3 N N N 126 DG C4 C Y N 127 DG HOP3 H N N 128 DG HOP2 H N N 129 DG "H5'" H N N 130 DG "H5''" H N N 131 DG "H4'" H N N 132 DG "H3'" H N N 133 DG "HO3'" H N N 134 DG "H2'" H N N 135 DG "H2''" H N N 136 DG "H1'" H N N 137 DG H8 H N N 138 DG H1 H N N 139 DG H21 H N N 140 DG H22 H N N 141 DT OP3 O N N 142 DT P P N N 143 DT OP1 O N N 144 DT OP2 O N N 145 DT "O5'" O N N 146 DT "C5'" C N N 147 DT "C4'" C N R 148 DT "O4'" O N N 149 DT "C3'" C N S 150 DT "O3'" O N N 151 DT "C2'" C N N 152 DT "C1'" C N R 153 DT N1 N N N 154 DT C2 C N N 155 DT O2 O N N 156 DT N3 N N N 157 DT C4 C N N 158 DT O4 O N N 159 DT C5 C N N 160 DT C7 C N N 161 DT C6 C N N 162 DT HOP3 H N N 163 DT HOP2 H N N 164 DT "H5'" H N N 165 DT "H5''" H N N 166 DT "H4'" H N N 167 DT "H3'" H N N 168 DT "HO3'" H N N 169 DT "H2'" H N N 170 DT "H2''" H N N 171 DT "H1'" H N N 172 DT H3 H N N 173 DT H71 H N N 174 DT H72 H N N 175 DT H73 H N N 176 DT H6 H N N 177 HOH O O N N 178 HOH H1 H N N 179 HOH H2 H N N 180 NA NA NA N N 181 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal BRU N1 C2 sing N N 1 BRU N1 C6 sing N N 2 BRU N1 "C1'" sing N N 3 BRU C2 N3 sing N N 4 BRU C2 O2 doub N N 5 BRU N3 C4 sing N N 6 BRU N3 HN3 sing N N 7 BRU C4 C5 sing N N 8 BRU C4 O4 doub N N 9 BRU C5 C6 doub N N 10 BRU C5 BR sing N N 11 BRU C6 H6 sing N N 12 BRU "C1'" "C2'" sing N N 13 BRU "C1'" "O4'" sing N N 14 BRU "C1'" "H1'" sing N N 15 BRU "C2'" "C3'" sing N N 16 BRU "C2'" "H2'" sing N N 17 BRU "C2'" "H2''" sing N N 18 BRU "C3'" "C4'" sing N N 19 BRU "C3'" "O3'" sing N N 20 BRU "C3'" "H3'" sing N N 21 BRU "C4'" "O4'" sing N N 22 BRU "C4'" "C5'" sing N N 23 BRU "C4'" "H4'" sing N N 24 BRU "O3'" "HO3'" sing N N 25 BRU "C5'" "O5'" sing N N 26 BRU "C5'" "H5'" sing N N 27 BRU "C5'" "H5''" sing N N 28 BRU "O5'" P sing N N 29 BRU P OP1 doub N N 30 BRU P OP2 sing N N 31 BRU P OP3 sing N N 32 BRU OP2 HOP2 sing N N 33 BRU OP3 HOP3 sing N N 34 DA OP3 P sing N N 35 DA OP3 HOP3 sing N N 36 DA P OP1 doub N N 37 DA P OP2 sing N N 38 DA P "O5'" sing N N 39 DA OP2 HOP2 sing N N 40 DA "O5'" "C5'" sing N N 41 DA "C5'" "C4'" sing N N 42 DA "C5'" "H5'" sing N N 43 DA "C5'" "H5''" sing N N 44 DA "C4'" "O4'" sing N N 45 DA "C4'" "C3'" sing N N 46 DA "C4'" "H4'" sing N N 47 DA "O4'" "C1'" sing N N 48 DA "C3'" "O3'" sing N N 49 DA "C3'" "C2'" sing N N 50 DA "C3'" "H3'" sing N N 51 DA "O3'" "HO3'" sing N N 52 DA "C2'" "C1'" sing N N 53 DA "C2'" "H2'" sing N N 54 DA "C2'" "H2''" sing N N 55 DA "C1'" N9 sing N N 56 DA "C1'" "H1'" sing N N 57 DA N9 C8 sing Y N 58 DA N9 C4 sing Y N 59 DA C8 N7 doub Y N 60 DA C8 H8 sing N N 61 DA N7 C5 sing Y N 62 DA C5 C6 sing Y N 63 DA C5 C4 doub Y N 64 DA C6 N6 sing N N 65 DA C6 N1 doub Y N 66 DA N6 H61 sing N N 67 DA N6 H62 sing N N 68 DA N1 C2 sing Y N 69 DA C2 N3 doub Y N 70 DA C2 H2 sing N N 71 DA N3 C4 sing Y N 72 DC OP3 P sing N N 73 DC OP3 HOP3 sing N N 74 DC P OP1 doub N N 75 DC P OP2 sing N N 76 DC P "O5'" sing N N 77 DC OP2 HOP2 sing N N 78 DC "O5'" "C5'" sing N N 79 DC "C5'" "C4'" sing N N 80 DC "C5'" "H5'" sing N N 81 DC "C5'" "H5''" sing N N 82 DC "C4'" "O4'" sing N N 83 DC "C4'" "C3'" sing N N 84 DC "C4'" "H4'" sing N N 85 DC "O4'" "C1'" sing N N 86 DC "C3'" "O3'" sing N N 87 DC "C3'" "C2'" sing N N 88 DC "C3'" "H3'" sing N N 89 DC "O3'" "HO3'" sing N N 90 DC "C2'" "C1'" sing N N 91 DC "C2'" "H2'" sing N N 92 DC "C2'" "H2''" sing N N 93 DC "C1'" N1 sing N N 94 DC "C1'" "H1'" sing N N 95 DC N1 C2 sing N N 96 DC N1 C6 sing N N 97 DC C2 O2 doub N N 98 DC C2 N3 sing N N 99 DC N3 C4 doub N N 100 DC C4 N4 sing N N 101 DC C4 C5 sing N N 102 DC N4 H41 sing N N 103 DC N4 H42 sing N N 104 DC C5 C6 doub N N 105 DC C5 H5 sing N N 106 DC C6 H6 sing N N 107 DG OP3 P sing N N 108 DG OP3 HOP3 sing N N 109 DG P OP1 doub N N 110 DG P OP2 sing N N 111 DG P "O5'" sing N N 112 DG OP2 HOP2 sing N N 113 DG "O5'" "C5'" sing N N 114 DG "C5'" "C4'" sing N N 115 DG "C5'" "H5'" sing N N 116 DG "C5'" "H5''" sing N N 117 DG "C4'" "O4'" sing N N 118 DG "C4'" "C3'" sing N N 119 DG "C4'" "H4'" sing N N 120 DG "O4'" "C1'" sing N N 121 DG "C3'" "O3'" sing N N 122 DG "C3'" "C2'" sing N N 123 DG "C3'" "H3'" sing N N 124 DG "O3'" "HO3'" sing N N 125 DG "C2'" "C1'" sing N N 126 DG "C2'" "H2'" sing N N 127 DG "C2'" "H2''" sing N N 128 DG "C1'" N9 sing N N 129 DG "C1'" "H1'" sing N N 130 DG N9 C8 sing Y N 131 DG N9 C4 sing Y N 132 DG C8 N7 doub Y N 133 DG C8 H8 sing N N 134 DG N7 C5 sing Y N 135 DG C5 C6 sing N N 136 DG C5 C4 doub Y N 137 DG C6 O6 doub N N 138 DG C6 N1 sing N N 139 DG N1 C2 sing N N 140 DG N1 H1 sing N N 141 DG C2 N2 sing N N 142 DG C2 N3 doub N N 143 DG N2 H21 sing N N 144 DG N2 H22 sing N N 145 DG N3 C4 sing N N 146 DT OP3 P sing N N 147 DT OP3 HOP3 sing N N 148 DT P OP1 doub N N 149 DT P OP2 sing N N 150 DT P "O5'" sing N N 151 DT OP2 HOP2 sing N N 152 DT "O5'" "C5'" sing N N 153 DT "C5'" "C4'" sing N N 154 DT "C5'" "H5'" sing N N 155 DT "C5'" "H5''" sing N N 156 DT "C4'" "O4'" sing N N 157 DT "C4'" "C3'" sing N N 158 DT "C4'" "H4'" sing N N 159 DT "O4'" "C1'" sing N N 160 DT "C3'" "O3'" sing N N 161 DT "C3'" "C2'" sing N N 162 DT "C3'" "H3'" sing N N 163 DT "O3'" "HO3'" sing N N 164 DT "C2'" "C1'" sing N N 165 DT "C2'" "H2'" sing N N 166 DT "C2'" "H2''" sing N N 167 DT "C1'" N1 sing N N 168 DT "C1'" "H1'" sing N N 169 DT N1 C2 sing N N 170 DT N1 C6 sing N N 171 DT C2 O2 doub N N 172 DT C2 N3 sing N N 173 DT N3 C4 sing N N 174 DT N3 H3 sing N N 175 DT C4 O4 doub N N 176 DT C4 C5 sing N N 177 DT C5 C7 sing N N 178 DT C5 C6 doub N N 179 DT C7 H71 sing N N 180 DT C7 H72 sing N N 181 DT C7 H73 sing N N 182 DT C6 H6 sing N N 183 HOH O H1 sing N N 184 HOH O H2 sing N N 185 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1P54 'double helix' 1P54 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 10 1_555 0.041 -0.058 0.058 -0.110 -13.775 0.485 1 A_DC1:DG20_B A 1 ? B 20 ? 19 1 1 A DC 2 1_555 B DG 9 1_555 0.469 -0.121 0.543 -1.830 -16.662 -0.482 2 A_DC2:DG19_B A 2 ? B 19 ? 19 1 1 A DA 3 1_555 B BRU 8 1_555 -0.085 -0.067 0.417 -3.669 -6.015 1.743 3 A_DA3:BRU18_B A 3 ? B 18 ? 20 1 1 A DG 4 1_555 B DC 7 1_555 -0.843 -0.485 0.221 4.459 -16.673 -6.000 4 A_DG4:DC17_B A 4 ? B 17 ? 19 1 1 A DT 5 1_555 B DA 6 1_555 0.106 -0.055 0.178 4.364 -0.040 4.769 5 A_DT5:DA16_B A 5 ? B 16 ? 20 1 1 A DA 6 1_555 B DT 5 1_555 0.217 0.159 0.205 14.311 -16.557 3.463 6 A_DA6:DT15_B A 6 ? B 15 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 10 1_555 A DC 2 1_555 B DG 9 1_555 0.200 2.022 3.646 6.057 2.540 45.082 2.359 0.346 3.743 3.292 -7.850 45.533 1 AA_DC1DC2:DG19DG20_BB A 1 ? B 20 ? A 2 ? B 19 ? 1 A DC 2 1_555 B DG 9 1_555 A DA 3 1_555 B BRU 8 1_555 0.263 2.820 3.276 2.188 -15.048 42.898 4.811 -0.173 2.226 -19.845 -2.885 45.393 2 AA_DC2DA3:BRU18DG19_BB A 2 ? B 19 ? A 3 ? B 18 ? 1 A DA 3 1_555 B BRU 8 1_555 A DG 4 1_555 B DC 7 1_555 0.383 0.066 3.132 -0.576 6.329 34.058 -0.823 -0.728 3.088 10.690 0.973 34.629 3 AA_DA3DG4:DC17BRU18_BB A 3 ? B 18 ? A 4 ? B 17 ? 1 A DG 4 1_555 B DC 7 1_555 A DT 5 1_555 B DA 6 1_555 0.806 -0.076 3.204 3.047 8.337 29.301 -1.779 -0.931 3.130 16.024 -5.856 30.588 4 AA_DG4DT5:DA16DC17_BB A 4 ? B 17 ? A 5 ? B 16 ? 1 A DT 5 1_555 B DA 6 1_555 A DA 6 1_555 B DT 5 1_555 -0.797 0.824 3.175 1.202 2.485 38.339 0.951 1.356 3.194 3.777 -1.828 38.435 5 AA_DT5DA6:DT15DA16_BB A 5 ? B 16 ? A 6 ? B 15 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SODIUM ION' NA 3 'CALCIUM ION' CA 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1L6B _pdbx_initial_refinement_model.details '1L6B USED FOR INITIAL SOLUTION VIA MOLECULAR REPLACEMENT' #