0.027778
0.000000
0.001436
0.000000
0.014445
0.000000
0.000000
0.000000
0.014489
0.00000
0.00000
0.00000
Zavialov, A.V.
Berglund, J.
Pudney, A.F.
Fooks, L.J.
Ibrahim, T.M.
MacIntyre, S.
Knight, S.D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.00
92.96
90.00
36.000
69.230
69.110
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Cell(Cambridge,Mass.)
CELLB5
0998
0092-8674
113
587
596
10.1016/S0092-8674(03)00351-9
12787500
Structure and Biogenesis of the Capsular F1 Antigen from Yersinia pestis. Preserved Folding Energy Drives Fiber Formation
2003
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
59
359
362
10.1107/S0907444902021054
Overexpression, purification, crystallization and preliminary X-ray diffraction
analysis of the F1 antigen Caf1MCaf1 chaperonesubunit pre-assembly complex from
Yersinia pestis
2003
UK
Mol.Microbiol.
MOMIEE
2007
0950-382X
45
983
995
10.1046/j.1365-2958.2002.03066.x
Donor strand complementation mechanism in the biogenesis of non-pilus systems
2002
100
1
100
1
100
1
100
1
CCD
2001-06-30
ADSC QUANTUM 4
CCD
2001-12-06
ADSC QUANTUM 4
CCD
2001-11-16
ADSC QUANTUM 4
CCD
2002-03-02
MARRESEARCH
Diamond (111), Ge(220)
SINGLE WAVELENGTH
M
x-ray
1
Double crystal, Si(111) or Si(311)
MAD
M
x-ray
1
Si(311), Si(111)
MAD
M
x-ray
1
Si(111)
SINGLE WAVELENGTH
M
x-ray
1
0.933
1.0
0.9798
1.0
0.9801
1.0
1.076
1.0
ID14-2
ESRF
0.933
SYNCHROTRON
ESRF BEAMLINE ID14-2
ID14-4
ESRF
0.9798, 0.9801
SYNCHROTRON
ESRF BEAMLINE ID14-4
ID29
ESRF
0.9798, 0.9801
SYNCHROTRON
ESRF BEAMLINE ID29
I711
MAX II
1.076
SYNCHROTRON
MAX II BEAMLINE I711
26329.012
Chaperone protein Caf1M
residues 24-258 of SWS P26926
1
man
polymer
HIS-tagged fragment of F1 capsule
15673.230
F1 capsule antigen
residues 35-170 of SWS P26948
1
man
polymer
18.015
water
138
nat
water
Caf1M chaperone; Caf1M; Capsule protein fraction 1; F1 chaperone protein
no
no
AQPDIKFASKEYGVTIGESRIIYPLDAAGVMVSVKNTQDYPVLIQSRIYDENKEKESEDPFVVTPPLFRLDAKQQNSLRI
AQAGGVFPRDKESLKWLCVKGIPPKDEDIWVDDATNKQKFNPDKDVGVFVQFAINNCIKLLVRPNELKGTPIQFAENLSW
KVDGGKLIAENPSPFYMNIGELTFGGKSIPSHYIPPKSTWAFDLPKGLAGARNVSWRIINDQGGLDRLYSKNVTL
AQPDIKFASKEYGVTIGESRIIYPLDAAGVMVSVKNTQDYPVLIQSRIYDENKEKESEDPFVVTPPLFRLDAKQQNSLRI
AQAGGVFPRDKESLKWLCVKGIPPKDEDIWVDDATNKQKFNPDKDVGVFVQFAINNCIKLLVRPNELKGTPIQFAENLSW
KVDGGKLIAENPSPFYMNIGELTFGGKSIPSHYIPPKSTWAFDLPKGLAGARNVSWRIINDQGGLDRLYSKNVTL
A
polypeptide(L)
no
no
ADLTSHHHHHHVEPARITLTYKEGAPITIMDNGNIDTELLVGTLTLGGYKTGTTSTSVNFTDAAGDPMYLTFTSQDGNNH
QFTTKVIGKDSRDFDISPKVNGENLVGDDVVLATGSQDFFVRSIGSKGGKLAAGKYTDAVTVTVSNQ
ADLTSHHHHHHVEPARITLTYKEGAPITIMDNGNIDTELLVGTLTLGGYKTGTTSTSVNFTDAAGDPMYLTFTSQDGNNH
QFTTKVIGKDSRDFDISPKVNGENLVGDDVVLATGSQDFFVRSIGSKGGKLAAGKYTDAVTVTVSNQ
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Yersinia
KIM5
Escherichia
sample
CAF1M
632
Yersinia pestis
562
Escherichia coli
B834 (DE3)
plasmid
pFM-1-6H
Yersinia
KIM5
Escherichia
sample
CAF1
632
Yersinia pestis
562
Escherichia coli
B834 (DE3)
plasmid
pFM-1-6H
1
2.05
39.90
VAPOR DIFFUSION, HANGING DROP
7.5
PEG 4000, Tris-HCl, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
diffrn_source
repository
Initial release
Version format compliance
Version format compliance
Data collection
1
0
2003-06-24
1
1
2008-04-29
1
2
2011-07-13
1
3
2018-03-07
_diffrn_source.pdbx_synchrotron_site
X-ray structure of the ternary Caf1M:Caf1:Caf1 chaperone:subunit:subunit complex
RCSB
Y
RCSB
2003-04-28
REL
HOH
water
HOH
3
3
HOH
HOH
236
A
HOH
4
3
HOH
HOH
237
A
HOH
5
3
HOH
HOH
238
A
HOH
6
3
HOH
HOH
239
A
HOH
11
3
HOH
HOH
240
A
HOH
12
3
HOH
HOH
241
A
HOH
14
3
HOH
HOH
242
A
HOH
17
3
HOH
HOH
243
A
HOH
18
3
HOH
HOH
244
A
HOH
21
3
HOH
HOH
245
A
HOH
22
3
HOH
HOH
246
A
HOH
23
3
HOH
HOH
247
A
HOH
25
3
HOH
HOH
248
A
HOH
26
3
HOH
HOH
249
A
HOH
28
3
HOH
HOH
250
A
HOH
29
3
HOH
HOH
251
A
HOH
30
3
HOH
HOH
252
A
HOH
37
3
HOH
HOH
253
A
HOH
40
3
HOH
HOH
254
A
HOH
41
3
HOH
HOH
255
A
HOH
42
3
HOH
HOH
256
A
HOH
43
3
HOH
HOH
257
A
HOH
44
3
HOH
HOH
258
A
HOH
45
3
HOH
HOH
259
A
HOH
46
3
HOH
HOH
260
A
HOH
48
3
HOH
HOH
261
A
HOH
52
3
HOH
HOH
262
A
HOH
53
3
HOH
HOH
263
A
HOH
54
3
HOH
HOH
264
A
HOH
56
3
HOH
HOH
265
A
HOH
60
3
HOH
HOH
266
A
HOH
62
3
HOH
HOH
267
A
HOH
63
3
HOH
HOH
268
A
HOH
64
3
HOH
HOH
269
A
HOH
65
3
HOH
HOH
270
A
HOH
66
3
HOH
HOH
271
A
HOH
67
3
HOH
HOH
272
A
HOH
69
3
HOH
HOH
273
A
HOH
74
3
HOH
HOH
274
A
HOH
75
3
HOH
HOH
275
A
HOH
76
3
HOH
HOH
276
A
HOH
78
3
HOH
HOH
277
A
HOH
79
3
HOH
HOH
278
A
HOH
80
3
HOH
HOH
279
A
HOH
81
3
HOH
HOH
280
A
HOH
84
3
HOH
HOH
281
A
HOH
86
3
HOH
HOH
282
A
HOH
87
3
HOH
HOH
283
A
HOH
100
3
HOH
HOH
284
A
HOH
101
3
HOH
HOH
285
A
HOH
105
3
HOH
HOH
286
A
HOH
107
3
HOH
HOH
287
A
HOH
108
3
HOH
HOH
288
A
HOH
111
3
HOH
HOH
289
A
HOH
115
3
HOH
HOH
290
A
HOH
118
3
HOH
HOH
291
A
HOH
119
3
HOH
HOH
292
A
HOH
124
3
HOH
HOH
293
A
HOH
126
3
HOH
HOH
294
A
HOH
127
3
HOH
HOH
295
A
HOH
128
3
HOH
HOH
296
A
HOH
129
3
HOH
HOH
297
A
HOH
130
3
HOH
HOH
298
A
HOH
131
3
HOH
HOH
299
A
HOH
134
3
HOH
HOH
300
A
HOH
135
3
HOH
HOH
301
A
HOH
137
3
HOH
HOH
302
A
HOH
138
3
HOH
HOH
303
A
HOH
1
3
HOH
HOH
150
B
HOH
2
3
HOH
HOH
151
B
HOH
7
3
HOH
HOH
152
B
HOH
8
3
HOH
HOH
153
B
HOH
9
3
HOH
HOH
154
B
HOH
10
3
HOH
HOH
155
B
HOH
13
3
HOH
HOH
156
B
HOH
15
3
HOH
HOH
157
B
HOH
16
3
HOH
HOH
158
B
HOH
19
3
HOH
HOH
159
B
HOH
20
3
HOH
HOH
160
B
HOH
24
3
HOH
HOH
161
B
HOH
27
3
HOH
HOH
162
B
HOH
31
3
HOH
HOH
163
B
HOH
32
3
HOH
HOH
164
B
HOH
33
3
HOH
HOH
165
B
HOH
34
3
HOH
HOH
166
B
HOH
35
3
HOH
HOH
167
B
HOH
36
3
HOH
HOH
168
B
HOH
38
3
HOH
HOH
169
B
HOH
39
3
HOH
HOH
170
B
HOH
47
3
HOH
HOH
171
B
HOH
49
3
HOH
HOH
172
B
HOH
50
3
HOH
HOH
173
B
HOH
51
3
HOH
HOH
174
B
HOH
55
3
HOH
HOH
175
B
HOH
57
3
HOH
HOH
176
B
HOH
58
3
HOH
HOH
177
B
HOH
59
3
HOH
HOH
178
B
HOH
61
3
HOH
HOH
179
B
HOH
68
3
HOH
HOH
180
B
HOH
70
3
HOH
HOH
181
B
HOH
71
3
HOH
HOH
182
B
HOH
72
3
HOH
HOH
183
B
HOH
73
3
HOH
HOH
184
B
HOH
77
3
HOH
HOH
185
B
HOH
82
3
HOH
HOH
186
B
HOH
83
3
HOH
HOH
187
B
HOH
85
3
HOH
HOH
188
B
HOH
88
3
HOH
HOH
189
B
HOH
89
3
HOH
HOH
190
B
HOH
90
3
HOH
HOH
191
B
HOH
91
3
HOH
HOH
192
B
HOH
92
3
HOH
HOH
193
B
HOH
93
3
HOH
HOH
194
B
HOH
94
3
HOH
HOH
195
B
HOH
95
3
HOH
HOH
196
B
HOH
96
3
HOH
HOH
197
B
HOH
97
3
HOH
HOH
198
B
HOH
98
3
HOH
HOH
199
B
HOH
99
3
HOH
HOH
200
B
HOH
102
3
HOH
HOH
201
B
HOH
103
3
HOH
HOH
202
B
HOH
104
3
HOH
HOH
203
B
HOH
106
3
HOH
HOH
204
B
HOH
109
3
HOH
HOH
205
B
HOH
110
3
HOH
HOH
206
B
HOH
112
3
HOH
HOH
207
B
HOH
113
3
HOH
HOH
208
B
HOH
114
3
HOH
HOH
209
B
HOH
116
3
HOH
HOH
210
B
HOH
117
3
HOH
HOH
211
B
HOH
120
3
HOH
HOH
212
B
HOH
121
3
HOH
HOH
213
B
HOH
122
3
HOH
HOH
214
B
HOH
123
3
HOH
HOH
215
B
HOH
125
3
HOH
HOH
216
B
HOH
132
3
HOH
HOH
217
B
HOH
133
3
HOH
HOH
218
B
HOH
136
3
HOH
HOH
219
B
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
n
5
5
A
n
6
6
A
PHE
7
n
7
PHE
7
A
ALA
8
n
8
ALA
8
A
SER
9
n
9
SER
9
A
LYS
10
n
10
LYS
10
A
GLU
11
n
11
GLU
11
A
TYR
12
n
12
TYR
12
A
GLY
13
n
13
GLY
13
A
VAL
14
n
14
VAL
14
A
THR
15
n
15
THR
15
A
ILE
16
n
16
ILE
16
A
GLY
17
n
17
GLY
17
A
GLU
18
n
18
GLU
18
A
SER
19
n
19
SER
19
A
ARG
20
n
20
ARG
20
A
ILE
21
n
21
ILE
21
A
ILE
22
n
22
ILE
22
A
TYR
23
n
23
TYR
23
A
PRO
24
n
24
PRO
24
A
LEU
25
n
25
LEU
25
A
ASP
26
n
26
ASP
26
A
ALA
27
n
27
ALA
27
A
ALA
28
n
28
ALA
28
A
GLY
29
n
29
GLY
29
A
VAL
30
n
30
VAL
30
A
MET
31
n
31
MET
31
A
VAL
32
n
32
VAL
32
A
SER
33
n
33
SER
33
A
VAL
34
n
34
VAL
34
A
LYS
35
n
35
LYS
35
A
ASN
36
n
36
ASN
36
A
THR
37
n
37
THR
37
A
GLN
38
n
38
GLN
38
A
ASP
39
n
39
ASP
39
A
TYR
40
n
40
TYR
40
A
PRO
41
n
41
PRO
41
A
VAL
42
n
42
VAL
42
A
LEU
43
n
43
LEU
43
A
ILE
44
n
44
ILE
44
A
GLN
45
n
45
GLN
45
A
SER
46
n
46
SER
46
A
ARG
47
n
47
ARG
47
A
ILE
48
n
48
ILE
48
A
TYR
49
n
49
TYR
49
A
n
50
50
A
n
51
51
A
n
52
52
A
n
53
53
A
n
54
54
A
n
55
55
A
n
56
56
A
n
57
57
A
n
58
58
A
ASP
59
n
59
ASP
59
A
PRO
60
n
60
PRO
60
A
PHE
61
n
61
PHE
61
A
VAL
62
n
62
VAL
62
A
VAL
63
n
63
VAL
63
A
THR
64
n
64
THR
64
A
PRO
65
n
65
PRO
65
A
PRO
66
n
66
PRO
66
A
LEU
67
n
67
LEU
67
A
PHE
68
n
68
PHE
68
A
ARG
69
n
69
ARG
69
A
LEU
70
n
70
LEU
70
A
ASP
71
n
71
ASP
71
A
ALA
72
n
72
ALA
72
A
LYS
73
n
73
LYS
73
A
GLN
74
n
74
GLN
74
A
GLN
75
n
75
GLN
75
A
ASN
76
n
76
ASN
76
A
SER
77
n
77
SER
77
A
LEU
78
n
78
LEU
78
A
ARG
79
n
79
ARG
79
A
ILE
80
n
80
ILE
80
A
ALA
81
n
81
ALA
81
A
GLN
82
n
82
GLN
82
A
ALA
83
n
83
ALA
83
A
GLY
84
n
84
GLY
84
A
GLY
85
n
85
GLY
85
A
VAL
86
n
86
VAL
86
A
PHE
87
n
87
PHE
87
A
PRO
88
n
88
PRO
88
A
ARG
89
n
89
ARG
89
A
ASP
90
n
90
ASP
90
A
LYS
91
n
91
LYS
91
A
GLU
92
n
92
GLU
92
A
SER
93
n
93
SER
93
A
LEU
94
n
94
LEU
94
A
LYS
95
n
95
LYS
95
A
TRP
96
n
96
TRP
96
A
LEU
97
n
97
LEU
97
A
CYS
98
n
98
CYS
98
A
VAL
99
n
99
VAL
99
A
LYS
100
n
100
LYS
100
A
GLY
101
n
101
GLY
101
A
ILE
102
n
102
ILE
102
A
PRO
103
n
103
PRO
103
A
n
104
104
A
n
105
105
A
n
106
106
A
n
107
107
A
n
108
108
A
n
109
109
A
n
110
110
A
n
111
111
A
n
112
112
A
n
113
113
A
n
114
114
A
n
115
115
A
n
116
116
A
n
117
117
A
n
118
118
A
n
119
119
A
n
120
120
A
n
121
121
A
n
122
122
A
n
123
123
A
LYS
124
n
124
LYS
124
A
ASP
125
n
125
ASP
125
A
VAL
126
n
126
VAL
126
A
GLY
127
n
127
GLY
127
A
VAL
128
n
128
VAL
128
A
PHE
129
n
129
PHE
129
A
VAL
130
n
130
VAL
130
A
GLN
131
n
131
GLN
131
A
PHE
132
n
132
PHE
132
A
ALA
133
n
133
ALA
133
A
ILE
134
n
134
ILE
134
A
ASN
135
n
135
ASN
135
A
ASN
136
n
136
ASN
136
A
CYS
137
n
137
CYS
137
A
ILE
138
n
138
ILE
138
A
LYS
139
n
139
LYS
139
A
LEU
140
n
140
LEU
140
A
LEU
141
n
141
LEU
141
A
VAL
142
n
142
VAL
142
A
ARG
143
n
143
ARG
143
A
PRO
144
n
144
PRO
144
A
ASN
145
n
145
ASN
145
A
GLU
146
n
146
GLU
146
A
LEU
147
n
147
LEU
147
A
LYS
148
n
148
LYS
148
A
GLY
149
n
149
GLY
149
A
THR
150
n
150
THR
150
A
PRO
151
n
151
PRO
151
A
ILE
152
n
152
ILE
152
A
GLN
153
n
153
GLN
153
A
PHE
154
n
154
PHE
154
A
ALA
155
n
155
ALA
155
A
GLU
156
n
156
GLU
156
A
ASN
157
n
157
ASN
157
A
LEU
158
n
158
LEU
158
A
SER
159
n
159
SER
159
A
TRP
160
n
160
TRP
160
A
LYS
161
n
161
LYS
161
A
VAL
162
n
162
VAL
162
A
ASP
163
n
163
ASP
163
A
GLY
164
n
164
GLY
164
A
GLY
165
n
165
GLY
165
A
LYS
166
n
166
LYS
166
A
LEU
167
n
167
LEU
167
A
ILE
168
n
168
ILE
168
A
ALA
169
n
169
ALA
169
A
GLU
170
n
170
GLU
170
A
ASN
171
n
171
ASN
171
A
PRO
172
n
172
PRO
172
A
SER
173
n
173
SER
173
A
PRO
174
n
174
PRO
174
A
PHE
175
n
175
PHE
175
A
TYR
176
n
176
TYR
176
A
MET
177
n
177
MET
177
A
ASN
178
n
178
ASN
178
A
ILE
179
n
179
ILE
179
A
GLY
180
n
180
GLY
180
A
GLU
181
n
181
GLU
181
A
LEU
182
n
182
LEU
182
A
THR
183
n
183
THR
183
A
PHE
184
n
184
PHE
184
A
GLY
185
n
185
GLY
185
A
GLY
186
n
186
GLY
186
A
LYS
187
n
187
LYS
187
A
SER
188
n
188
SER
188
A
ILE
189
n
189
ILE
189
A
PRO
190
n
190
PRO
190
A
SER
191
n
191
SER
191
A
HIS
192
n
192
HIS
192
A
TYR
193
n
193
TYR
193
A
ILE
194
n
194
ILE
194
A
PRO
195
n
195
PRO
195
A
PRO
196
n
196
PRO
196
A
LYS
197
n
197
LYS
197
A
SER
198
n
198
SER
198
A
THR
199
n
199
THR
199
A
TRP
200
n
200
TRP
200
A
ALA
201
n
201
ALA
201
A
PHE
202
n
202
PHE
202
A
ASP
203
n
203
ASP
203
A
LEU
204
n
204
LEU
204
A
PRO
205
n
205
PRO
205
A
n
206
206
A
n
207
207
A
n
208
208
A
n
209
209
A
n
210
210
A
n
211
211
A
n
212
212
A
ASN
213
n
213
ASN
213
A
VAL
214
n
214
VAL
214
A
SER
215
n
215
SER
215
A
TRP
216
n
216
TRP
216
A
ARG
217
n
217
ARG
217
A
ILE
218
n
218
ILE
218
A
ILE
219
n
219
ILE
219
A
ASN
220
n
220
ASN
220
A
ASP
221
n
221
ASP
221
A
GLN
222
n
222
GLN
222
A
GLY
223
n
223
GLY
223
A
GLY
224
n
224
GLY
224
A
LEU
225
n
225
LEU
225
A
ASP
226
n
226
ASP
226
A
ARG
227
n
227
ARG
227
A
LEU
228
n
228
LEU
228
A
TYR
229
n
229
TYR
229
A
SER
230
n
230
SER
230
A
LYS
231
n
231
LYS
231
A
ASN
232
n
232
ASN
232
A
VAL
233
n
233
VAL
233
A
n
234
234
A
n
235
235
A
n
1
3
B
n
2
4
B
n
3
5
B
n
4
6
B
n
5
7
B
n
6
8
B
n
7
9
B
n
8
10
B
n
9
11
B
n
10
12
B
n
11
13
B
VAL
14
n
12
VAL
14
B
GLU
15
n
13
GLU
15
B
PRO
16
n
14
PRO
16
B
ALA
17
n
15
ALA
17
B
ARG
18
n
16
ARG
18
B
ILE
19
n
17
ILE
19
B
THR
20
n
18
THR
20
B
LEU
21
n
19
LEU
21
B
THR
22
n
20
THR
22
B
TYR
23
n
21
TYR
23
B
LYS
24
n
22
LYS
24
B
GLU
25
n
23
GLU
25
B
GLY
26
n
24
GLY
26
B
ALA
27
n
25
ALA
27
B
PRO
28
n
26
PRO
28
B
ILE
29
n
27
ILE
29
B
THR
30
n
28
THR
30
B
ILE
31
n
29
ILE
31
B
MET
32
n
30
MET
32
B
ASP
33
n
31
ASP
33
B
ASN
34
n
32
ASN
34
B
GLY
35
n
33
GLY
35
B
ASN
36
n
34
ASN
36
B
ILE
37
n
35
ILE
37
B
ASP
38
n
36
ASP
38
B
THR
39
n
37
THR
39
B
GLU
40
n
38
GLU
40
B
LEU
41
n
39
LEU
41
B
LEU
42
n
40
LEU
42
B
VAL
43
n
41
VAL
43
B
GLY
44
n
42
GLY
44
B
THR
45
n
43
THR
45
B
LEU
46
n
44
LEU
46
B
THR
47
n
45
THR
47
B
LEU
48
n
46
LEU
48
B
GLY
49
n
47
GLY
49
B
GLY
50
n
48
GLY
50
B
TYR
51
n
49
TYR
51
B
LYS
52
n
50
LYS
52
B
THR
53
n
51
THR
53
B
GLY
54
n
52
GLY
54
B
THR
55
n
53
THR
55
B
THR
56
n
54
THR
56
B
SER
57
n
55
SER
57
B
THR
58
n
56
THR
58
B
SER
59
n
57
SER
59
B
VAL
60
n
58
VAL
60
B
ASN
61
n
59
ASN
61
B
PHE
62
n
60
PHE
62
B
THR
63
n
61
THR
63
B
ASP
64
n
62
ASP
64
B
ALA
65
n
63
ALA
65
B
ALA
66
n
64
ALA
66
B
GLY
67
n
65
GLY
67
B
ASP
68
n
66
ASP
68
B
PRO
69
n
67
PRO
69
B
MET
70
n
68
MET
70
B
TYR
71
n
69
TYR
71
B
LEU
72
n
70
LEU
72
B
THR
73
n
71
THR
73
B
PHE
74
n
72
PHE
74
B
THR
75
n
73
THR
75
B
SER
76
n
74
SER
76
B
GLN
77
n
75
GLN
77
B
ASP
78
n
76
ASP
78
B
GLY
79
n
77
GLY
79
B
ASN
80
n
78
ASN
80
B
ASN
81
n
79
ASN
81
B
HIS
82
n
80
HIS
82
B
GLN
83
n
81
GLN
83
B
PHE
84
n
82
PHE
84
B
THR
85
n
83
THR
85
B
THR
86
n
84
THR
86
B
LYS
87
n
85
LYS
87
B
VAL
88
n
86
VAL
88
B
ILE
89
n
87
ILE
89
B
GLY
90
n
88
GLY
90
B
LYS
91
n
89
LYS
91
B
ASP
92
n
90
ASP
92
B
SER
93
n
91
SER
93
B
ARG
94
n
92
ARG
94
B
ASP
95
n
93
ASP
95
B
PHE
96
n
94
PHE
96
B
ASP
97
n
95
ASP
97
B
ILE
98
n
96
ILE
98
B
SER
99
n
97
SER
99
B
PRO
100
n
98
PRO
100
B
LYS
101
n
99
LYS
101
B
VAL
102
n
100
VAL
102
B
ASN
103
n
101
ASN
103
B
GLY
104
n
102
GLY
104
B
GLU
105
n
103
GLU
105
B
ASN
106
n
104
ASN
106
B
LEU
107
n
105
LEU
107
B
VAL
108
n
106
VAL
108
B
GLY
109
n
107
GLY
109
B
ASP
110
n
108
ASP
110
B
ASP
111
n
109
ASP
111
B
VAL
112
n
110
VAL
112
B
VAL
113
n
111
VAL
113
B
LEU
114
n
112
LEU
114
B
ALA
115
n
113
ALA
115
B
THR
116
n
114
THR
116
B
GLY
117
n
115
GLY
117
B
SER
118
n
116
SER
118
B
GLN
119
n
117
GLN
119
B
ASP
120
n
118
ASP
120
B
PHE
121
n
119
PHE
121
B
PHE
122
n
120
PHE
122
B
VAL
123
n
121
VAL
123
B
ARG
124
n
122
ARG
124
B
SER
125
n
123
SER
125
B
ILE
126
n
124
ILE
126
B
GLY
127
n
125
GLY
127
B
SER
128
n
126
SER
128
B
LYS
129
n
127
LYS
129
B
GLY
130
n
128
GLY
130
B
GLY
131
n
129
GLY
131
B
LYS
132
n
130
LYS
132
B
LEU
133
n
131
LEU
133
B
ALA
134
n
132
ALA
134
B
ALA
135
n
133
ALA
135
B
GLY
136
n
134
GLY
136
B
LYS
137
n
135
LYS
137
B
TYR
138
n
136
TYR
138
B
THR
139
n
137
THR
139
B
ASP
140
n
138
ASP
140
B
ALA
141
n
139
ALA
141
B
VAL
142
n
140
VAL
142
B
THR
143
n
141
THR
143
B
VAL
144
n
142
VAL
144
B
THR
145
n
143
THR
145
B
VAL
146
n
144
VAL
146
B
SER
147
n
145
SER
147
B
ASN
148
n
146
ASN
148
B
GLN
149
n
147
GLN
149
B
0.7872
0.0728
-0.0506
2.4153
-1.0926
1.7971
0.0034
-0.0029
0.0635
0.1072
-0.0258
-0.0257
-0.0976
-0.0103
0.0224
0.0002
-0.0013
0.0036
0.1071
-0.0288
0.0832
refined
11.1677
35.1586
4.4580
X-RAY DIFFRACTION
3.1529
-0.7653
-0.2806
8.2842
1.9303
2.2161
0.0143
-0.2845
0.3711
0.8105
0.0685
-0.3304
-0.2349
0.0628
-0.0828
0.3628
-0.0182
-0.0434
0.1954
-0.0437
0.1718
refined
16.5839
47.6792
27.4215
X-RAY DIFFRACTION
A
7
A
7
A
145
A
145
X-RAY DIFFRACTION
1
B
14
B
12
B
149
B
147
X-RAY DIFFRACTION
1
A
146
A
146
A
233
A
233
X-RAY DIFFRACTION
2
author_and_software_defined_assembly
PISA
2
dimeric
3640
-19
14830
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
80
A
N
ILE
80
A
O
VAL
30
A
O
VAL
30
A
O
LYS
35
A
O
LYS
35
A
N
THR
15
A
N
THR
15
A
O
ILE
16
A
O
ILE
16
B
N
ALA
17
B
N
ALA
15
B
N
LYS
24
B
N
LYS
22
B
O
THR
45
B
O
THR
43
B
N
LEU
48
B
N
LEU
46
B
O
GLN
119
B
O
GLN
117
B
O
GLY
127
B
O
GLY
125
B
N
THR
85
B
N
THR
83
B
N
GLY
90
B
N
GLY
88
B
O
ILE
98
B
O
ILE
96
B
O
ILE
98
B
O
ILE
96
B
N
GLY
90
B
N
GLY
88
B
O
THR
86
B
O
THR
84
B
N
LEU
72
B
N
LEU
70
B
O
THR
75
B
O
THR
73
B
N
THR
139
B
N
THR
137
B
N
THR
145
B
N
THR
143
B
O
ASN
61
B
O
ASN
59
B
N
PHE
62
B
N
PHE
60
B
O
LYS
101
B
O
LYS
99
B
N
LYS
101
B
N
LYS
99
B
O
VAL
60
B
O
VAL
58
B
O
THR
63
B
O
THR
61
B
N
THR
143
B
N
THR
141
B
N
GLY
136
B
N
GLY
134
A
O
ASP
125
A
O
ASP
125
A
N
LEU
141
A
N
LEU
141
A
O
ILE
21
A
O
ILE
21
A
N
ILE
21
A
N
ILE
21
A
O
LYS
139
A
O
LYS
139
A
N
VAL
142
A
N
VAL
142
A
O
SER
93
A
O
SER
93
A
N
ILE
102
A
N
ILE
102
A
O
LEU
43
A
O
LEU
43
A
N
ILE
44
A
N
ILE
44
A
O
PHE
68
A
O
PHE
68
A
N
LEU
70
A
N
LEU
70
A
O
VAL
42
A
O
VAL
42
A
N
TYR
49
A
N
TYR
49
A
O
TRP
96
A
O
TRP
96
A
N
GLY
101
A
N
GLY
101
A
O
ILE
134
A
O
ILE
134
A
N
VAL
126
A
N
VAL
126
B
O
ILE
29
B
O
ILE
27
A
N
ASN
171
A
N
ASN
171
A
O
SER
198
A
O
SER
198
A
O
MET
177
A
O
MET
177
A
N
ILE
194
A
N
ILE
194
A
O
ILE
194
A
O
ILE
194
A
N
MET
177
A
N
MET
177
A
N
THR
183
A
N
THR
183
A
O
SER
215
A
O
SER
215
A
O
TRP
216
A
O
TRP
216
A
N
TYR
229
A
N
TYR
229
1
A
CG
LYS
10
A
CG
LYS
10
1
Y
1
A
CD
LYS
10
A
CD
LYS
10
1
Y
1
A
CE
LYS
10
A
CE
LYS
10
1
Y
1
A
NZ
LYS
10
A
NZ
LYS
10
1
Y
1
A
CG
GLU
11
A
CG
GLU
11
1
Y
1
A
CD
GLU
11
A
CD
GLU
11
1
Y
1
A
OE1
GLU
11
A
OE1
GLU
11
1
Y
1
A
OE2
GLU
11
A
OE2
GLU
11
1
Y
1
A
CB
ALA
83
A
CB
ALA
83
1
Y
1
A
CB
VAL
86
A
CB
VAL
86
1
Y
1
A
CG1
VAL
86
A
CG1
VAL
86
1
Y
1
A
CG2
VAL
86
A
CG2
VAL
86
1
Y
1
A
CB
ARG
89
A
CB
ARG
89
1
Y
1
A
CG
ARG
89
A
CG
ARG
89
1
Y
1
A
CD
ARG
89
A
CD
ARG
89
1
Y
1
A
NE
ARG
89
A
NE
ARG
89
1
Y
1
A
CZ
ARG
89
A
CZ
ARG
89
1
Y
1
A
NH1
ARG
89
A
NH1
ARG
89
1
Y
1
A
NH2
ARG
89
A
NH2
ARG
89
1
Y
1
A
CB
ASP
90
A
CB
ASP
90
1
Y
1
A
CG
ASP
90
A
CG
ASP
90
1
Y
1
A
OD1
ASP
90
A
OD1
ASP
90
1
Y
1
A
OD2
ASP
90
A
OD2
ASP
90
1
Y
1
A
CG
LYS
124
A
CG
LYS
124
1
Y
1
A
CD
LYS
124
A
CD
LYS
124
1
Y
1
A
CE
LYS
124
A
CE
LYS
124
1
Y
1
A
NZ
LYS
124
A
NZ
LYS
124
1
Y
1
A
CG
ASP
125
A
CG
ASP
125
1
Y
1
A
OD1
ASP
125
A
OD1
ASP
125
1
Y
1
A
OD2
ASP
125
A
OD2
ASP
125
1
Y
1
A
NE2
GLN
131
A
NE2
GLN
131
1
Y
1
A
CB
LYS
148
A
CB
LYS
148
1
Y
1
A
CG
LYS
148
A
CG
LYS
148
1
Y
1
A
CD
LYS
148
A
CD
LYS
148
1
Y
1
A
CE
LYS
148
A
CE
LYS
148
1
Y
1
A
NZ
LYS
148
A
NZ
LYS
148
1
Y
1
B
CB
ASP
33
B
CB
ASP
31
1
Y
1
B
CG
ASP
33
B
CG
ASP
31
1
Y
1
B
OD1
ASP
33
B
OD1
ASP
31
1
Y
1
B
OD2
ASP
33
B
OD2
ASP
31
1
Y
1
B
CB
ASP
110
B
CB
ASP
108
1
Y
1
B
CG
ASP
110
B
CG
ASP
108
1
Y
1
B
OD1
ASP
110
B
OD1
ASP
108
1
Y
1
B
OD2
ASP
110
B
OD2
ASP
108
1
Y
1
A
ALA
1
A
ALA
1
1
Y
1
A
GLN
2
A
GLN
2
1
Y
1
A
PRO
3
A
PRO
3
1
Y
1
A
ASP
4
A
ASP
4
1
Y
1
A
ILE
5
A
ILE
5
1
Y
1
A
LYS
6
A
LYS
6
1
Y
1
A
ASP
50
A
ASP
50
1
Y
1
A
GLU
51
A
GLU
51
1
Y
1
A
ASN
52
A
ASN
52
1
Y
1
A
LYS
53
A
LYS
53
1
Y
1
A
GLU
54
A
GLU
54
1
Y
1
A
LYS
55
A
LYS
55
1
Y
1
A
GLU
56
A
GLU
56
1
Y
1
A
SER
57
A
SER
57
1
Y
1
A
GLU
58
A
GLU
58
1
Y
1
A
PRO
104
A
PRO
104
1
Y
1
A
LYS
105
A
LYS
105
1
Y
1
A
ASP
106
A
ASP
106
1
Y
1
A
GLU
107
A
GLU
107
1
Y
1
A
ASP
108
A
ASP
108
1
Y
1
A
ILE
109
A
ILE
109
1
Y
1
A
TRP
110
A
TRP
110
1
Y
1
A
VAL
111
A
VAL
111
1
Y
1
A
ASP
112
A
ASP
112
1
Y
1
A
ASP
113
A
ASP
113
1
Y
1
A
ALA
114
A
ALA
114
1
Y
1
A
THR
115
A
THR
115
1
Y
1
A
ASN
116
A
ASN
116
1
Y
1
A
LYS
117
A
LYS
117
1
Y
1
A
GLN
118
A
GLN
118
1
Y
1
A
LYS
119
A
LYS
119
1
Y
1
A
PHE
120
A
PHE
120
1
Y
1
A
ASN
121
A
ASN
121
1
Y
1
A
PRO
122
A
PRO
122
1
Y
1
A
ASP
123
A
ASP
123
1
Y
1
A
LYS
206
A
LYS
206
1
Y
1
A
GLY
207
A
GLY
207
1
Y
1
A
LEU
208
A
LEU
208
1
Y
1
A
ALA
209
A
ALA
209
1
Y
1
A
GLY
210
A
GLY
210
1
Y
1
A
ALA
211
A
ALA
211
1
Y
1
A
ARG
212
A
ARG
212
1
Y
1
A
THR
234
A
THR
234
1
Y
1
A
LEU
235
A
LEU
235
1
Y
1
B
ALA
3
B
ALA
1
1
Y
1
B
ASP
4
B
ASP
2
1
Y
1
B
LEU
5
B
LEU
3
1
Y
1
B
THR
6
B
THR
4
1
Y
1
B
SER
7
B
SER
5
1
Y
1
B
HIS
8
B
HIS
6
1
Y
1
B
HIS
9
B
HIS
7
1
Y
1
B
HIS
10
B
HIS
8
1
Y
1
B
HIS
11
B
HIS
9
1
Y
1
B
HIS
12
B
HIS
10
1
Y
1
B
HIS
13
B
HIS
11
1
Y
1
B
B
GLY
LYS
131
132
-139.83
1
3.03
0.50
120.30
123.33
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
79
79
79
N
1
5.52
0.90
118.30
123.82
A
A
A
CB
CG
OD2
ASP
ASP
ASP
163
163
163
N
1
7.56
0.90
118.30
125.86
B
B
B
CB
CG
OD2
ASP
ASP
ASP
95
95
95
N
1
A
A
CB
CG1
VAL
VAL
32
32
-0.135
0.021
1.524
1.389
N
1
A
A
N
CA
ARG
ARG
89
89
0.133
0.020
1.459
1.592
N
1
B
MET
70
84.38
-13.25
1
B
ILE
126
-109.23
-77.43
1
B
LYS
132
-15.25
107.71
13.07
0.98000
0.00000
0.37000
-1.85000
0.00000
0.90000
0.956
0.933
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.244
0.198
0.201
0.201
1.70
20
1711
34122
32386
5.0
91.00
3.085
0.097
RANDOM
1
THROUGHOUT
0
MAD
0.123
0.124
0.80
0.80
1.40
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
0.125
0.124
1.70
20
138
2650
0
0
2512
0.027
0.022
2569
0.003
0.020
2312
2.218
1.957
3494
0.984
3.000
5393
7.518
5.000
332
0.150
0.200
398
0.010
0.020
2885
0.003
0.020
501
0.255
0.200
394
0.257
0.200
2624
0.095
0.200
1608
0.143
0.200
110
0.263
0.200
6
0.343
0.200
26
0.217
0.200
5
1.324
1.500
1647
2.171
2.000
2663
3.034
3.000
922
4.621
4.500
831
0.365
0.303
1.74
82
1857
1857
20
20.3
1.70
20.
1P5V
34122
34122
0
0
0.077
1,2,3,4
20.9
3.3
90.5
0.791
1.70
1.75
1.6
2587
69.5
data reduction
MOSFLM
data scaling
SCALA
phasing
SHARP
refinement
REFMAC
5.1.24
data scaling
CCP4
(SCALA)
Chaperone protein Caf1M/F1 capsule antigen complex
X-ray structure of the Caf1M:Caf1 chaperone:subunit preassembly complex
1
N
N
2
N
N
3
N
N
3
N
N
A
THR
150
A
THR
150
HELX_P
A
LEU
158
A
LEU
158
5
1
9
B
THR
56
B
THR
54
HELX_P
B
THR
58
B
THR
56
5
2
3
disulf
2.269
A
CYS
98
A
SG
CYS
98
1_555
A
CYS
137
A
SG
CYS
137
1_555
CHAPERONE, STRUCTURAL PROTEIN
chaperone, chaperone-target complex, chaperone-subunit complex, protein fiber, donor strand complementation, donor strand exchange, STRUCTURAL PROTEIN
A
THR
64
A
THR
64
1
A
PRO
65
A
PRO
65
-8.13
CAF1M_YERPE
UNP
1
24
P26926
AQPDIKFASKEYGVTIGESRIIYPLDAAGVMVSVKNTQDYPVLIQSRIYDENKEKESEDPFVVTPPLFRLDAKQQNSLRI
AQAGGVFPRDKESLKWLCVKGIPPKDEDIWVDDATNKQKFNPDKDVGVFVQFAINNCIKLLVRPNELKGTPIQFAENLSW
KVDGGKLIAENPSPFYMNIGELTFGGKSIPSHYIPPKSTWAFDLPKGLAGARNVSWRIINDQGGLDRLYSKNVTL
CAF1_YERPE
UNP
2
35
P26948
VEPARITLTYKEGAPITIMDNGNIDTELLVGTLTLGGYKTGTTSTSVNFTDAAGDPMYLTFTSQDGNNHQFTTKVIGKDS
RDFDISPKVNGENLVGDDVVLATGSQDFFVRSIGSKGGKLAAGKYTDAVTVTVSNQ
24
258
1P5V
1
235
P26926
A
1
1
235
35
170
1P5V
14
149
P26948
B
2
12
147
2
EXPRESSION TAG
ALA
3
1P5V
B
P26948
UNP
1
2
EXPRESSION TAG
ASP
4
1P5V
B
P26948
UNP
2
2
EXPRESSION TAG
LEU
5
1P5V
B
P26948
UNP
3
2
EXPRESSION TAG
THR
6
1P5V
B
P26948
UNP
4
2
EXPRESSION TAG
SER
7
1P5V
B
P26948
UNP
5
2
EXPRESSION TAG
HIS
8
1P5V
B
P26948
UNP
6
2
EXPRESSION TAG
HIS
9
1P5V
B
P26948
UNP
7
2
EXPRESSION TAG
HIS
10
1P5V
B
P26948
UNP
8
2
EXPRESSION TAG
HIS
11
1P5V
B
P26948
UNP
9
2
EXPRESSION TAG
HIS
12
1P5V
B
P26948
UNP
10
2
EXPRESSION TAG
HIS
13
1P5V
B
P26948
UNP
11
25
2
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
anti-parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLN
75
A
GLN
75
A
GLN
82
A
GLN
82
A
VAL
30
A
VAL
30
A
ASN
36
A
ASN
36
A
SER
9
A
SER
9
A
ILE
16
A
ILE
16
B
ALA
17
B
ALA
15
B
GLU
25
B
GLU
23
B
LEU
42
B
LEU
40
B
GLY
49
B
GLY
47
B
SER
118
B
SER
116
B
GLY
127
B
GLY
125
B
GLN
83
B
GLN
81
B
LYS
91
B
LYS
89
B
ASP
97
B
ASP
95
B
ILE
98
B
ILE
96
B
GLN
83
B
GLN
81
B
LYS
91
B
LYS
89
B
LEU
72
B
LEU
70
B
SER
76
B
SER
74
B
GLY
136
B
GLY
134
B
SER
147
B
SER
145
B
VAL
60
B
VAL
58
B
THR
63
B
THR
61
B
LYS
101
B
LYS
99
B
VAL
102
B
VAL
100
B
VAL
60
B
VAL
58
B
THR
63
B
THR
61
B
GLY
136
B
GLY
134
B
SER
147
B
SER
145
A
ASP
125
A
ASP
125
A
ARG
143
A
ARG
143
A
ARG
20
A
ARG
20
A
PRO
24
A
PRO
24
A
ASP
125
A
ASP
125
A
ARG
143
A
ARG
143
A
SER
93
A
SER
93
A
ILE
102
A
ILE
102
A
VAL
42
A
VAL
42
A
TYR
49
A
TYR
49
A
LEU
67
A
LEU
67
A
LEU
70
A
LEU
70
A
VAL
42
A
VAL
42
A
TYR
49
A
TYR
49
A
SER
93
A
SER
93
A
ILE
102
A
ILE
102
A
ASP
125
A
ASP
125
A
ARG
143
A
ARG
143
B
ILE
29
B
ILE
27
B
THR
30
B
THR
28
A
LYS
166
A
LYS
166
A
ASN
171
A
ASN
171
A
SER
198
A
SER
198
A
ASP
203
A
ASP
203
A
MET
177
A
MET
177
A
PHE
184
A
PHE
184
A
TYR
193
A
TYR
193
A
ILE
194
A
ILE
194
A
MET
177
A
MET
177
A
PHE
184
A
PHE
184
A
VAL
214
A
VAL
214
A
ILE
218
A
ILE
218
A
TYR
229
A
TYR
229
A
LYS
231
A
LYS
231
4
monoclinic
P 1 21 1