0.012500 0.000000 0.000000 0.000000 0.012500 0.000000 0.000000 0.000000 0.010644 0.00000 0.00000 0.00000 Sabini, E. Ort, S. Monnerjahn, C. Konrad, M. Lavie, A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 80.001 80.001 93.946 C10 H15 N5 O10 P2 427.201 n ADENOSINE-5'-DIPHOSPHATE non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C9 H13 N3 O4 227.217 2'-DEOXYCYTIDINE DNA OH 5 prime terminus C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N P N 2 N O N 3 N O N 4 N O N 5 S P N 6 N O N 7 N O N 8 N O N 9 N O N 10 N C N 11 R C N 12 N O N 13 S C N 14 N O N 15 R C N 16 N O N 17 R C Y 18 N N Y 19 N C Y 20 N N Y 21 N C Y 22 N C N 23 N N Y 24 N N Y 25 N C Y 26 N N Y 27 N C N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N N N 44 S C N 45 N C N 46 N O N 47 N C N 48 N O N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N N N 57 S C N 58 N C N 59 N O N 60 N C N 61 N C N 62 N C N 63 N N N 64 N C N 65 N N N 66 N N N 67 N O N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N N N 84 S C N 85 N C N 86 N O N 87 N C N 88 N C N 89 N O N 90 N N N 91 N O N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N N N 101 S C N 102 N C N 103 N O N 104 N C N 105 N C N 106 N O N 107 N O N 108 N O N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N N N 117 R C N 118 N C N 119 N O N 120 N C N 121 N S N 122 N O N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N N N 131 N C N 132 N N N 133 N C N 134 N C N 135 N C N 136 N O N 137 N N N 138 R C N 139 N C N 140 S C N 141 R C N 142 N O N 143 N O N 144 N C N 145 N O N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N N N 160 S C N 161 N C N 162 N O N 163 N C N 164 N C N 165 N C N 166 N O N 167 N N N 168 N O N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N N N 180 S C N 181 N C N 182 N O N 183 N C N 184 N C N 185 N C N 186 N O N 187 N O N 188 N O N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N N N 199 N C N 200 N C N 201 N O N 202 N O N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N N N 209 S C N 210 N C N 211 N O N 212 N C Y 213 N C Y 214 N N Y 215 N C Y 216 N C Y 217 N N N 218 N O N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N O N 230 N H N 231 N H N 232 N N N 233 S C N 234 N C N 235 N O N 236 S C N 237 N C N 238 N C N 239 N C N 240 N O N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N N N 255 S C N 256 N C N 257 N O N 258 N C N 259 N C N 260 N C N 261 N C N 262 N O N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N N N 277 S C N 278 N C N 279 N O N 280 N C N 281 N C N 282 N C N 283 N C N 284 N N N 285 N O N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N N N 302 S C N 303 N C N 304 N O N 305 N C N 306 N C N 307 N S N 308 N C N 309 N O N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N C Y 330 N C Y 331 N C N 332 N O N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N N N 345 S C N 346 N C N 347 N O N 348 N C N 349 N C N 350 N C N 351 N O N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N N N 362 S C N 363 N C N 364 N O N 365 N C N 366 N O N 367 N O N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N N N 376 S C N 377 N C N 378 N O N 379 R C N 380 N O N 381 N C N 382 N O N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N N N 393 S C N 394 N C N 395 N O N 396 N C Y 397 N C Y 398 N C Y 399 N C Y 400 N N Y 401 N C Y 402 N C Y 403 N C Y 404 N C Y 405 N C N 406 N O N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N N N 420 S C N 421 N C N 422 N O N 423 N C Y 424 N C Y 425 N C Y 426 N C Y 427 N C Y 428 N C Y 429 N C N 430 N O N 431 N O N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N N N 444 S C N 445 N C N 446 N O N 447 N C N 448 N C N 449 N C N 450 N O N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 1 N doub N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing Y 30 N sing Y 31 N sing Y 32 N doub N 33 N sing Y 34 N sing Y 35 N sing Y 36 N doub N 37 N sing Y 38 N doub N 39 N sing N 40 N sing Y 41 N sing Y 42 N doub N 43 N sing Y 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N doub N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N doub N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N doub N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N doub N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N doub N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N doub N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N doub N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N doub N 132 N doub N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N doub N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N doub N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N doub N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N doub N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N doub N 210 N sing N 211 N sing N 212 N sing N 213 N sing Y 214 N sing Y 215 N doub Y 216 N doub N 217 N sing Y 218 N sing N 219 N sing Y 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N doub N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N doub N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N doub N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N doub N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N doub N 318 N sing N 319 N sing N 320 N sing N 321 N sing Y 322 N doub Y 323 N sing Y 324 N sing N 325 N sing Y 326 N doub N 327 N sing Y 328 N doub N 329 N sing Y 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N doub N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N doub N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N doub N 387 N sing N 388 N sing N 389 N sing N 390 N sing Y 391 N doub Y 392 N sing Y 393 N sing N 394 N sing Y 395 N doub Y 396 N sing Y 397 N sing N 398 N sing Y 399 N sing Y 400 N doub N 401 N sing Y 402 N doub N 403 N sing Y 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N doub N 415 N sing N 416 N sing N 417 N sing N 418 N sing Y 419 N doub Y 420 N sing Y 421 N sing N 422 N sing Y 423 N doub N 424 N sing Y 425 N doub N 426 N sing Y 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N doub N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing US Nat.Struct.Biol. NSBIEW 2024 1072-8368 10 513 519 10.1038/nsb942 12808445 Structure of human dCK suggests strategies to improve anticancer and antiviral therapy 2003 10.2210/pdb1p61/pdb pdb_00001p61 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 110 1 CCD 2001-03-21 MARRESEARCH SINGLE WAVELENGTH M x-ray 1 0.9552 1.0 14-BM-D APS 0.9552 SYNCHROTRON APS BEAMLINE 14-BM-D 30834.779 Deoxycytidine kinase 2.7.1.74 1 man polymer 427.201 ADENOSINE-5'-DIPHOSPHATE 1 syn non-polymer 227.217 2'-DEOXYCYTIDINE 1 syn non-polymer 18.015 water 131 nat water dCK no no GSHMATPPKRSCPSFSASSEGTRIKKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQSTQDEFEELTMSQKN GGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESECMNETEWTIYQD WHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLD VNEDFKDKYESLVEKVKEFLSTL GSHMATPPKRSCPSFSASSEGTRIKKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQSTQDEFEELTMSQKN GGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESECMNETEWTIYQD WHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLD VNEDFKDKYESLVEKVKEFLSTL B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia Escherichia coli sample DCK 9606 Homo sapiens 469008 Escherichia coli BL21(DE3) BL21(DE3) PLASMID pET14b 1 2.44 49.52 VAPOR DIFFUSION, SITTING DROP 7.5 0.95-1.0M citrate trisodium dihydrate, 100mM Hepes, 5mM deoxycytidine, 5mM ADP, 5mM MgCl2, 5mM DTT, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K 298 chem_comp chem_comp_atom chem_comp_bond database_2 struct_ref_seq_dif struct_site repository Initial release Version format compliance Derived calculations Version format compliance Data collection Database references Derived calculations 1 0 2003-07-01 1 1 2008-04-29 1 2 2011-07-13 1 3 2024-02-14 _chem_comp.type _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id COMPLEXED WITH CYTARABINE COMPLEXED WITH 2'-DEOXYCYTIDINE AND ADP COMPLEXED WITH GEMCITABINE RCSB Y RCSB 2003-04-28 REL REL ADP ADENOSINE-5'-DIPHOSPHATE DCZ 2'-DEOXYCYTIDINE HOH water ADP 301 2 ADP ADP 301 B DCY 302 3 DCZ DCZ 302 B HOH 1 4 HOH HOH 303 B HOH 2 4 HOH HOH 304 B HOH 3 4 HOH HOH 305 B HOH 4 4 HOH HOH 306 B HOH 5 4 HOH HOH 307 B HOH 6 4 HOH HOH 308 B HOH 7 4 HOH HOH 309 B HOH 8 4 HOH HOH 310 B HOH 9 4 HOH HOH 311 B HOH 11 4 HOH HOH 312 B HOH 12 4 HOH HOH 313 B HOH 13 4 HOH HOH 314 B HOH 14 4 HOH HOH 315 B HOH 15 4 HOH HOH 316 B HOH 16 4 HOH HOH 317 B HOH 17 4 HOH HOH 318 B HOH 18 4 HOH HOH 319 B HOH 19 4 HOH HOH 320 B HOH 20 4 HOH HOH 321 B HOH 21 4 HOH HOH 322 B HOH 23 4 HOH HOH 323 B HOH 25 4 HOH HOH 324 B HOH 26 4 HOH HOH 325 B HOH 27 4 HOH HOH 326 B HOH 28 4 HOH HOH 327 B HOH 31 4 HOH HOH 328 B HOH 32 4 HOH HOH 329 B HOH 33 4 HOH HOH 330 B HOH 35 4 HOH HOH 331 B HOH 37 4 HOH HOH 332 B HOH 38 4 HOH HOH 333 B HOH 39 4 HOH HOH 334 B HOH 40 4 HOH HOH 335 B HOH 41 4 HOH HOH 336 B HOH 42 4 HOH HOH 337 B HOH 43 4 HOH HOH 338 B HOH 45 4 HOH HOH 339 B HOH 47 4 HOH HOH 340 B HOH 49 4 HOH HOH 341 B HOH 50 4 HOH HOH 342 B HOH 51 4 HOH HOH 343 B HOH 52 4 HOH HOH 344 B HOH 53 4 HOH HOH 345 B HOH 55 4 HOH HOH 346 B HOH 56 4 HOH HOH 347 B HOH 57 4 HOH HOH 348 B HOH 58 4 HOH HOH 349 B HOH 59 4 HOH HOH 350 B HOH 60 4 HOH HOH 351 B HOH 61 4 HOH HOH 352 B HOH 62 4 HOH HOH 353 B HOH 63 4 HOH HOH 354 B HOH 64 4 HOH HOH 355 B HOH 65 4 HOH HOH 356 B HOH 66 4 HOH HOH 357 B HOH 67 4 HOH HOH 358 B HOH 68 4 HOH HOH 359 B HOH 70 4 HOH HOH 360 B HOH 71 4 HOH HOH 361 B HOH 72 4 HOH HOH 362 B HOH 73 4 HOH HOH 363 B HOH 75 4 HOH HOH 364 B HOH 78 4 HOH HOH 365 B HOH 81 4 HOH HOH 366 B HOH 82 4 HOH HOH 367 B HOH 83 4 HOH HOH 368 B HOH 84 4 HOH HOH 369 B HOH 87 4 HOH HOH 370 B HOH 88 4 HOH HOH 371 B HOH 89 4 HOH HOH 372 B HOH 92 4 HOH HOH 373 B HOH 95 4 HOH HOH 374 B HOH 96 4 HOH HOH 375 B HOH 97 4 HOH HOH 376 B HOH 98 4 HOH HOH 377 B HOH 99 4 HOH HOH 378 B HOH 100 4 HOH HOH 379 B HOH 102 4 HOH HOH 380 B HOH 103 4 HOH HOH 381 B HOH 104 4 HOH HOH 382 B HOH 105 4 HOH HOH 383 B HOH 106 4 HOH HOH 384 B HOH 108 4 HOH HOH 385 B HOH 109 4 HOH HOH 386 B HOH 110 4 HOH HOH 387 B HOH 117 4 HOH HOH 388 B HOH 120 4 HOH HOH 389 B HOH 121 4 HOH HOH 390 B HOH 123 4 HOH HOH 391 B HOH 124 4 HOH HOH 392 B HOH 126 4 HOH HOH 393 B HOH 130 4 HOH HOH 394 B HOH 131 4 HOH HOH 395 B HOH 133 4 HOH HOH 396 B HOH 134 4 HOH HOH 397 B HOH 135 4 HOH HOH 398 B HOH 136 4 HOH HOH 399 B HOH 137 4 HOH HOH 400 B HOH 141 4 HOH HOH 401 B HOH 145 4 HOH HOH 402 B HOH 148 4 HOH HOH 403 B HOH 150 4 HOH HOH 404 B HOH 151 4 HOH HOH 405 B HOH 152 4 HOH HOH 406 B HOH 153 4 HOH HOH 407 B HOH 154 4 HOH HOH 408 B HOH 156 4 HOH HOH 409 B HOH 157 4 HOH HOH 410 B HOH 164 4 HOH HOH 411 B HOH 167 4 HOH HOH 412 B HOH 170 4 HOH HOH 413 B HOH 171 4 HOH HOH 414 B HOH 177 4 HOH HOH 415 B HOH 178 4 HOH HOH 416 B HOH 180 4 HOH HOH 417 B HOH 181 4 HOH HOH 418 B HOH 182 4 HOH HOH 419 B HOH 183 4 HOH HOH 420 B HOH 184 4 HOH HOH 421 B HOH 185 4 HOH HOH 422 B HOH 186 4 HOH HOH 423 B HOH 187 4 HOH HOH 424 B HOH 188 4 HOH HOH 425 B HOH 190 4 HOH HOH 426 B HOH 191 4 HOH HOH 427 B HOH 193 4 HOH HOH 428 B HOH 195 4 HOH HOH 429 B HOH 196 4 HOH HOH 430 B HOH 198 4 HOH HOH 431 B HOH 199 4 HOH HOH 432 B HOH 200 4 HOH HOH 433 B n 1 -2 B n 2 -1 B n 3 0 B n 4 1 B n 5 2 B n 6 3 B n 7 4 B n 8 5 B n 9 6 B n 10 7 B n 11 8 B n 12 9 B n 13 10 B n 14 11 B n 15 12 B n 16 13 B n 17 14 B n 18 15 B n 19 16 B n 20 17 B n 21 18 B n 22 19 B ARG 20 n 23 ARG 20 B ILE 21 n 24 ILE 21 B LYS 22 n 25 LYS 22 B LYS 23 n 26 LYS 23 B ILE 24 n 27 ILE 24 B SER 25 n 28 SER 25 B ILE 26 n 29 ILE 26 B GLU 27 n 30 GLU 27 B GLY 28 n 31 GLY 28 B ASN 29 n 32 ASN 29 B ILE 30 n 33 ILE 30 B ALA 31 n 34 ALA 31 B ALA 32 n 35 ALA 32 B GLY 33 n 36 GLY 33 B LYS 34 n 37 LYS 34 B SER 35 n 38 SER 35 B THR 36 n 39 THR 36 B PHE 37 n 40 PHE 37 B VAL 38 n 41 VAL 38 B ASN 39 n 42 ASN 39 B ILE 40 n 43 ILE 40 B LEU 41 n 44 LEU 41 B LYS 42 n 45 LYS 42 B GLN 43 n 46 GLN 43 B LEU 44 n 47 LEU 44 B CYS 45 n 48 CYS 45 B ALA 46 n 49 GLU 46 B ASP 47 n 50 ASP 47 B TRP 48 n 51 TRP 48 B GLU 49 n 52 GLU 49 B VAL 50 n 53 VAL 50 B VAL 51 n 54 VAL 51 B PRO 52 n 55 PRO 52 B GLU 53 n 56 GLU 53 B PRO 54 n 57 PRO 54 B VAL 55 n 58 VAL 55 B ALA 56 n 59 ALA 56 B ARG 57 n 60 ARG 57 B TRP 58 n 61 TRP 58 B CYS 59 n 62 CYS 59 B ASN 60 n 63 ASN 60 B VAL 61 n 64 VAL 61 B GLN 62 n 65 GLN 62 B SER 63 n 66 SER 63 B ALA 64 n 67 THR 64 B n 68 65 B n 69 66 B n 70 67 B n 71 68 B n 72 69 B n 73 70 B n 74 71 B n 75 72 B n 76 73 B n 77 74 B n 78 75 B n 79 76 B ASN 77 n 80 ASN 77 B GLY 78 n 81 GLY 78 B GLY 79 n 82 GLY 79 B ASN 80 n 83 ASN 80 B VAL 81 n 84 VAL 81 B LEU 82 n 85 LEU 82 B GLN 83 n 86 GLN 83 B MET 84 n 87 MET 84 B MET 85 n 88 MET 85 B TYR 86 n 89 TYR 86 B ALA 87 n 90 GLU 87 B LYS 88 n 91 LYS 88 B PRO 89 n 92 PRO 89 B GLU 90 n 93 GLU 90 B ARG 91 n 94 ARG 91 B TRP 92 n 95 TRP 92 B SER 93 n 96 SER 93 B PHE 94 n 97 PHE 94 B THR 95 n 98 THR 95 B PHE 96 n 99 PHE 96 B GLN 97 n 100 GLN 97 B THR 98 n 101 THR 98 B TYR 99 n 102 TYR 99 B ALA 100 n 103 ALA 100 B CYS 101 n 104 CYS 101 B LEU 102 n 105 LEU 102 B SER 103 n 106 SER 103 B ARG 104 n 107 ARG 104 B ILE 105 n 108 ILE 105 B ARG 106 n 109 ARG 106 B ALA 107 n 110 ALA 107 B GLN 108 n 111 GLN 108 B LEU 109 n 112 LEU 109 B ALA 110 n 113 ALA 110 B SER 111 n 114 SER 111 B LEU 112 n 115 LEU 112 B ALA 113 n 116 ASN 113 B GLY 114 n 117 GLY 114 B ALA 115 n 118 LYS 115 B LEU 116 n 119 LEU 116 B ALA 117 n 120 LYS 117 B ALA 118 n 121 ASP 118 B ALA 119 n 122 ALA 119 B ALA 120 n 123 GLU 120 B ALA 121 n 124 LYS 121 B PRO 122 n 125 PRO 122 B VAL 123 n 126 VAL 123 B LEU 124 n 127 LEU 124 B PHE 125 n 128 PHE 125 B PHE 126 n 129 PHE 126 B GLU 127 n 130 GLU 127 B ARG 128 n 131 ARG 128 B SER 129 n 132 SER 129 B VAL 130 n 133 VAL 130 B TYR 131 n 134 TYR 131 B SER 132 n 135 SER 132 B ASP 133 n 136 ASP 133 B ARG 134 n 137 ARG 134 B TYR 135 n 138 TYR 135 B ILE 136 n 139 ILE 136 B PHE 137 n 140 PHE 137 B ALA 138 n 141 ALA 138 B SER 139 n 142 SER 139 B ASN 140 n 143 ASN 140 B LEU 141 n 144 LEU 141 B TYR 142 n 145 TYR 142 B GLU 143 n 146 GLU 143 B SER 144 n 147 SER 144 B GLU 145 n 148 GLU 145 B CYS 146 n 149 CYS 146 B MET 147 n 150 MET 147 B ASN 148 n 151 ASN 148 B GLU 149 n 152 GLU 149 B THR 150 n 153 THR 150 B GLU 151 n 154 GLU 151 B TRP 152 n 155 TRP 152 B THR 153 n 156 THR 153 B ILE 154 n 157 ILE 154 B TYR 155 n 158 TYR 155 B GLN 156 n 159 GLN 156 B ASP 157 n 160 ASP 157 B TRP 158 n 161 TRP 158 B HIS 159 n 162 HIS 159 B ASP 160 n 163 ASP 160 B TRP 161 n 164 TRP 161 B MET 162 n 165 MET 162 B ASN 163 n 166 ASN 163 B ASN 164 n 167 ASN 164 B GLN 165 n 168 GLN 165 B PHE 166 n 169 PHE 166 B GLY 167 n 170 GLY 167 B GLN 168 n 171 GLN 168 B SER 169 n 172 SER 169 B LEU 170 n 173 LEU 170 B GLU 171 n 174 GLU 171 B LEU 172 n 175 LEU 172 B ASP 173 n 176 ASP 173 B GLY 174 n 177 GLY 174 B ILE 175 n 178 ILE 175 B ILE 176 n 179 ILE 176 B TYR 177 n 180 TYR 177 B LEU 178 n 181 LEU 178 B GLN 179 n 182 GLN 179 B ALA 180 n 183 ALA 180 B THR 181 n 184 THR 181 B PRO 182 n 185 PRO 182 B GLU 183 n 186 GLU 183 B THR 184 n 187 THR 184 B CYS 185 n 188 CYS 185 B LEU 186 n 189 LEU 186 B HIS 187 n 190 HIS 187 B ARG 188 n 191 ARG 188 B ILE 189 n 192 ILE 189 B TYR 190 n 193 TYR 190 B LEU 191 n 194 LEU 191 B ARG 192 n 195 ARG 192 B GLY 193 n 196 GLY 193 B ARG 194 n 197 ARG 194 B ASN 195 n 198 ASN 195 B GLU 196 n 199 GLU 196 B GLU 197 n 200 GLU 197 B GLN 198 n 201 GLN 198 B GLY 199 n 202 GLY 199 B ILE 200 n 203 ILE 200 B PRO 201 n 204 PRO 201 B LEU 202 n 205 LEU 202 B GLU 203 n 206 GLU 203 B TYR 204 n 207 TYR 204 B LEU 205 n 208 LEU 205 B GLU 206 n 209 GLU 206 B LYS 207 n 210 LYS 207 B LEU 208 n 211 LEU 208 B HIS 209 n 212 HIS 209 B TYR 210 n 213 TYR 210 B LYS 211 n 214 LYS 211 B HIS 212 n 215 HIS 212 B GLU 213 n 216 GLU 213 B SER 214 n 217 SER 214 B TRP 215 n 218 TRP 215 B LEU 216 n 219 LEU 216 B LEU 217 n 220 LEU 217 B HIS 218 n 221 HIS 218 B ARG 219 n 222 ARG 219 B THR 220 n 223 THR 220 B LEU 221 n 224 LEU 221 B ALA 222 n 225 LYS 222 B THR 223 n 226 THR 223 B ASN 224 n 227 ASN 224 B PHE 225 n 228 PHE 225 B ASP 226 n 229 ASP 226 B TYR 227 n 230 TYR 227 B LEU 228 n 231 LEU 228 B GLN 229 n 232 GLN 229 B GLU 230 n 233 GLU 230 B VAL 231 n 234 VAL 231 B PRO 232 n 235 PRO 232 B ILE 233 n 236 ILE 233 B LEU 234 n 237 LEU 234 B THR 235 n 238 THR 235 B LEU 236 n 239 LEU 236 B ASP 237 n 240 ASP 237 B VAL 238 n 241 VAL 238 B ASN 239 n 242 ASN 239 B GLU 240 n 243 GLU 240 B ASP 241 n 244 ASP 241 B PHE 242 n 245 PHE 242 B LYS 243 n 246 LYS 243 B ASP 244 n 247 ASP 244 B GLY 245 n 248 LYS 245 B TYR 246 n 249 TYR 246 B ALA 247 n 250 GLU 247 B SER 248 n 251 SER 248 B LEU 249 n 252 LEU 249 B VAL 250 n 253 VAL 250 B GLU 251 n 254 GLU 251 B LYS 252 n 255 LYS 252 B VAL 253 n 256 VAL 253 B LYS 254 n 257 LYS 254 B GLU 255 n 258 GLU 255 B PHE 256 n 259 PHE 256 B LEU 257 n 260 LEU 257 B SER 258 n 261 SER 258 B THR 259 n 262 THR 259 B LEU 260 n 263 LEU 260 B author_and_software_defined_assembly PISA,PQS 2 dimeric 4840 -19 19840 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 8_665 -y+1,-x+1,-z+1/2 crystal symmetry operation 80.0010000000 80.0010000000 46.9730000000 B N GLU 49 A N GLU 52 B O VAL 123 A O VAL 126 B O LEU 124 A O LEU 127 B N LYS 22 A N LYS 25 B N GLU 27 A N GLU 30 B O ILE 176 A O ILE 179 B N TYR 177 A N TYR 180 B O LEU 234 A O LEU 237 1 B HOH 424 D HOH 1 B CG GLU 46 A CG GLU 49 1 Y 1 B CD GLU 46 A CD GLU 49 1 Y 1 B OE1 GLU 46 A OE1 GLU 49 1 Y 1 B OE2 GLU 46 A OE2 GLU 49 1 Y 1 B OG1 THR 64 A OG1 THR 67 1 Y 1 B CG2 THR 64 A CG2 THR 67 1 Y 1 B CG GLU 87 A CG GLU 90 1 Y 1 B CD GLU 87 A CD GLU 90 1 Y 1 B OE1 GLU 87 A OE1 GLU 90 1 Y 1 B OE2 GLU 87 A OE2 GLU 90 1 Y 1 B CG ASN 113 A CG ASN 116 1 Y 1 B OD1 ASN 113 A OD1 ASN 116 1 Y 1 B ND2 ASN 113 A ND2 ASN 116 1 Y 1 B CG LYS 115 A CG LYS 118 1 Y 1 B CD LYS 115 A CD LYS 118 1 Y 1 B CE LYS 115 A CE LYS 118 1 Y 1 B NZ LYS 115 A NZ LYS 118 1 Y 1 B CG LYS 117 A CG LYS 120 1 Y 1 B CD LYS 117 A CD LYS 120 1 Y 1 B CE LYS 117 A CE LYS 120 1 Y 1 B NZ LYS 117 A NZ LYS 120 1 Y 1 B CG ASP 118 A CG ASP 121 1 Y 1 B OD1 ASP 118 A OD1 ASP 121 1 Y 1 B OD2 ASP 118 A OD2 ASP 121 1 Y 1 B CG GLU 120 A CG GLU 123 1 Y 1 B CD GLU 120 A CD GLU 123 1 Y 1 B OE1 GLU 120 A OE1 GLU 123 1 Y 1 B OE2 GLU 120 A OE2 GLU 123 1 Y 1 B CG LYS 121 A CG LYS 124 1 Y 1 B CD LYS 121 A CD LYS 124 1 Y 1 B CE LYS 121 A CE LYS 124 1 Y 1 B NZ LYS 121 A NZ LYS 124 1 Y 1 B CG LYS 222 A CG LYS 225 1 Y 1 B CD LYS 222 A CD LYS 225 1 Y 1 B CE LYS 222 A CE LYS 225 1 Y 1 B NZ LYS 222 A NZ LYS 225 1 Y 1 B CB LYS 245 A CB LYS 248 1 Y 1 B CG LYS 245 A CG LYS 248 1 Y 1 B CD LYS 245 A CD LYS 248 1 Y 1 B CE LYS 245 A CE LYS 248 1 Y 1 B NZ LYS 245 A NZ LYS 248 1 Y 1 B CG GLU 247 A CG GLU 250 1 Y 1 B CD GLU 247 A CD GLU 250 1 Y 1 B OE1 GLU 247 A OE1 GLU 250 1 Y 1 B OE2 GLU 247 A OE2 GLU 250 1 Y 1 B GLY -2 A GLY 1 1 Y 1 B SER -1 A SER 2 1 Y 1 B HIS 0 A HIS 3 1 Y 1 B MET 1 A MET 4 1 Y 1 B ALA 2 A ALA 5 1 Y 1 B THR 3 A THR 6 1 Y 1 B PRO 4 A PRO 7 1 Y 1 B PRO 5 A PRO 8 1 Y 1 B LYS 6 A LYS 9 1 Y 1 B ARG 7 A ARG 10 1 Y 1 B SER 8 A SER 11 1 Y 1 B CYS 9 A CYS 12 1 Y 1 B PRO 10 A PRO 13 1 Y 1 B SER 11 A SER 14 1 Y 1 B PHE 12 A PHE 15 1 Y 1 B SER 13 A SER 16 1 Y 1 B ALA 14 A ALA 17 1 Y 1 B SER 15 A SER 18 1 Y 1 B SER 16 A SER 19 1 Y 1 B GLU 17 A GLU 20 1 Y 1 B GLY 18 A GLY 21 1 Y 1 B THR 19 A THR 22 1 Y 1 B GLN 65 A GLN 68 1 Y 1 B ASP 66 A ASP 69 1 Y 1 B GLU 67 A GLU 70 1 Y 1 B PHE 68 A PHE 71 1 Y 1 B GLU 69 A GLU 72 1 Y 1 B GLU 70 A GLU 73 1 Y 1 B LEU 71 A LEU 74 1 Y 1 B THR 72 A THR 75 1 Y 1 B MET 73 A MET 76 1 Y 1 B SER 74 A SER 77 1 Y 1 B GLN 75 A GLN 78 1 Y 1 B LYS 76 A LYS 79 1 Y 1 B B O O HOH HOH 355 394 1.81 1 B B LYS LEU 115 116 147.69 1 B B LEU LYS 116 117 143.47 1 B B LYS ASP 117 118 -147.80 1 5.73 0.90 118.30 124.03 B B B CB CG OD2 ASP ASP ASP 173 173 173 N 1 B LYS 115 34.54 42.58 1 B LYS 117 -64.26 -155.49 1 B ASP 118 68.98 -77.47 1 B ALA 119 53.44 -65.74 1 B GLU 120 118.10 -76.01 1 B LYS 121 -112.62 62.57 1 B ARG 128 61.17 -179.37 1 B ILE 136 -97.34 -68.48 1 B GLN 168 50.81 -56.32 39.706 2.17 0.00 0.00 2.17 0.00 -4.34 0.946 0.925 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.27964 0.22158 0.22733 2.21 20 1537 13671 10.1 95.79 6.278 0.153 RANDOM 1 THROUGHOUT 0 MAD 0.314 0.251 0.80 0.80 1.40 MAXIMUM LIKELIHOOD BABINET MODEL WITH MASK 2.21 20 131 2043 43 0 1869 0.021 0.021 1961 0.002 0.020 1713 1.885 1.962 2668 0.915 3.000 3981 7.942 5.000 227 0.097 0.200 288 0.008 0.020 2159 0.007 0.020 414 0.219 0.200 422 0.250 0.200 1948 0.095 0.200 1151 0.194 0.200 98 0.279 0.200 13 0.300 0.200 57 0.395 0.200 7 1.097 1.500 1141 2.000 2.000 1834 2.658 3.000 820 4.250 4.500 834 0.666 0.652 2.266 100 878 20 2.2 30.0 1P61 15208 0.064 1 28.2 2.2 2.3 7.5 0.156 1 refinement REFMAC 5.1.24 Structure of human dCK complexed with 2'-Deoxycytidine and ADP, P 43 21 2 space group 1 N N 2 N N 3 N N 4 N N B GLY 33 A GLY 36 HELX_P B CYS 45 A CYS 48 1 1 13 B PRO 54 A PRO 57 HELX_P B ASN 60 A ASN 63 1 2 7 B ASN 80 A ASN 83 HELX_P B LYS 88 A LYS 91 1 3 9 B LYS 88 A LYS 91 HELX_P B ASN 113 A ASN 116 1 4 26 B SER 129 A SER 132 HELX_P B ILE 136 A ILE 139 1 5 8 B ILE 136 A ILE 139 HELX_P B SER 144 A SER 147 1 6 9 B ASN 148 A ASN 151 HELX_P B GLY 167 A GLY 170 1 7 20 B THR 181 A THR 184 HELX_P B GLY 193 A GLY 196 1 8 13 B ARG 194 A ARG 197 HELX_P B GLN 198 A GLN 201 5 9 5 B PRO 201 A PRO 204 HELX_P B LEU 217 A LEU 220 1 10 17 B PHE 225 A PHE 228 HELX_P B GLU 230 A GLU 233 5 11 6 B ASP 241 A ASP 244 HELX_P B THR 259 A THR 262 1 12 19 TRANSFERASE nucleoside kinase, P-loop, deoxycytidine, TRANSFERASE DCK_HUMAN UNP 1 1 P27707 MATPPKRSCPSFSASSEGTRIKKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQSTQDEFEELTMSQKNGGN VLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESECMNETEWTIYQDWHD WMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNE DFKDKYESLVEKVKEFLSTL 1 260 1P61 1 260 P27707 B 1 4 263 1 cloning artifact GLY -2 1P61 B P27707 UNP 1 1 cloning artifact SER -1 1P61 B P27707 UNP 2 1 cloning artifact HIS 0 1P61 B P27707 UNP 3 5 parallel parallel parallel parallel B TRP 48 A TRP 51 B VAL 51 A VAL 54 B VAL 123 A VAL 126 B GLU 127 A GLU 130 B LYS 22 A LYS 25 B GLU 27 A GLU 30 B GLY 174 A GLY 177 B GLN 179 A GLN 182 B ILE 233 A ILE 236 B ASP 237 A ASP 240 BINDING SITE FOR RESIDUE ADP B 301 B ADP 301 Software 21 BINDING SITE FOR RESIDUE DCZ B 302 B DCZ 302 Software 15 B ALA 31 A ALA 34 21 1_555 B ALA 32 A ALA 35 21 1_555 B GLY 33 A GLY 36 21 1_555 B LYS 34 A LYS 37 21 1_555 B SER 35 A SER 38 21 1_555 B THR 36 A THR 39 21 1_555 B ARG 188 A ARG 191 21 1_555 B ARG 192 A ARG 195 21 1_555 B TYR 210 A TYR 213 21 4_565 B GLU 213 A GLU 216 21 4_565 B HIS 218 A HIS 221 21 4_565 B VAL 238 A VAL 241 21 1_555 B GLU 240 A GLU 243 21 1_555 B ASP 241 A ASP 244 21 1_555 B PHE 242 A PHE 245 21 1_555 B HOH 310 D HOH 21 1_555 B HOH 311 D HOH 21 1_555 B HOH 325 D HOH 21 1_555 B HOH 326 D HOH 21 4_565 B HOH 341 D HOH 21 4_565 B HOH 346 D HOH 21 1_555 B ILE 30 A ILE 33 15 1_555 B GLU 53 A GLU 56 15 1_555 B VAL 55 A VAL 58 15 1_555 B TRP 58 A TRP 61 15 1_555 B LEU 82 A LEU 85 15 1_555 B MET 85 A MET 88 15 1_555 B TYR 86 A TYR 89 15 1_555 B PHE 96 A PHE 99 15 1_555 B GLN 97 A GLN 100 15 1_555 B ARG 128 A ARG 131 15 1_555 B ASP 133 A ASP 136 15 1_555 B PHE 137 A PHE 140 15 1_555 B GLU 197 A GLU 200 15 1_555 B HOH 303 D HOH 15 1_555 B HOH 323 D HOH 15 1_555 96 P 43 21 2