0.022393
0.012929
0.000000
0.000000
0.025857
0.000000
0.000000
0.000000
0.007978
0.00000
0.00000
0.00000
Doan, D.N.P.
Dokland, T.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
44.657
44.657
125.347
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
S
N
212
N
C
N
213
N
O
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
N
N
226
S
C
N
227
N
C
N
228
N
O
N
229
N
C
Y
230
N
C
Y
231
N
C
Y
232
N
C
Y
233
N
C
Y
234
N
C
Y
235
N
C
N
236
N
O
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
N
N
249
S
C
N
250
N
C
N
251
N
O
N
252
N
C
N
253
N
C
N
254
N
C
N
255
N
O
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
N
N
266
S
C
N
267
N
C
N
268
N
O
N
269
N
C
N
270
N
O
N
271
N
O
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
N
N
280
S
C
N
281
N
C
N
282
N
O
N
283
R
C
N
284
N
O
N
285
N
C
N
286
N
O
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
N
N
297
S
C
N
298
N
C
N
299
N
O
N
300
N
C
Y
301
N
C
Y
302
N
C
Y
303
N
C
Y
304
N
C
Y
305
N
C
Y
306
N
C
N
307
N
O
N
308
N
O
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
N
N
321
S
C
N
322
N
C
N
323
N
O
N
324
N
C
N
325
N
C
N
326
N
C
N
327
N
O
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
doub
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
Y
224
N
doub
Y
225
N
sing
Y
226
N
sing
N
227
N
sing
Y
228
N
doub
N
229
N
sing
Y
230
N
doub
N
231
N
sing
Y
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
doub
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
doub
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
doub
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
doub
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
Y
293
N
doub
Y
294
N
sing
Y
295
N
sing
N
296
N
sing
Y
297
N
doub
N
298
N
sing
Y
299
N
doub
N
300
N
sing
Y
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
UK
Structure
STRUE6
2005
0969-2126
11
1445
1451
10.1016/j.str.2003.09.018
14604534
Structure of the nucleocapsid protein of porcine reproductive and respiratory syndrome virus.
2003
To be Published
0353
Cloning, expression, crystallization and preliminary X-ray diffraction analysis of the structural domain of the nucleocapsid N protein from porcine reproductive and respiratory syndrome virus
10.2210/pdb1p65/pdb
pdb_00001p65
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.0
1
CCD
2002-11-27
MARRESEARCH
silica
SINGLE WAVELENGTH
M
x-ray
1
1.74
1.0
BW7A
EMBL/DESY, HAMBURG
1.74
SYNCHROTRON
EMBL/DESY, HAMBURG BEAMLINE BW7A
8172.031
nucleocapsid protein
capsid-forming domain
2
man
polymer
18.015
water
24
nat
water
no
no
MAHHHHHHTEDDVRHHFTPSERQLCLSSIQTAFNQGAGTCTLSDSGRISYTVEFSLPTHHTVRLIRVTASPSA
MAHHHHHHTEDDVRHHFTPSERQLCLSSIQTAFNQGAGTCTLSDSGRISYTVEFSLPTHHTVRLIRVTASPSA
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Arterivirus
Escherichia
sample
orf7
28344
Porcine respiratory and reproductive syndrome virus
562
Escherichia coli
PLASMID
PET14b
1
2.21
44.26
VAPOR DIFFUSION, HANGING DROP
6.5
PEG3350, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 288K
288
chem_comp_atom
chem_comp_bond
database_2
diffrn_source
struct_ref_seq_dif
repository
Initial release
Version format compliance
Advisory
Version format compliance
Data collection
Database references
1
0
2003-11-25
1
1
2008-04-29
1
2
2011-07-13
1
3
2024-02-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_diffrn_source.pdbx_synchrotron_site
_struct_ref_seq_dif.details
RCSB
Y
RCSB
2003-04-29
REL
REL
HOH
water
HOH
1
2
HOH
HOH
73
A
HOH
2
2
HOH
HOH
74
A
HOH
6
2
HOH
HOH
75
A
HOH
7
2
HOH
HOH
76
A
HOH
18
2
HOH
HOH
77
A
HOH
19
2
HOH
HOH
78
A
HOH
26
2
HOH
HOH
79
A
HOH
27
2
HOH
HOH
80
A
HOH
28
2
HOH
HOH
81
A
HOH
29
2
HOH
HOH
82
A
HOH
30
2
HOH
HOH
83
A
HOH
31
2
HOH
HOH
84
A
HOH
32
2
HOH
HOH
85
A
HOH
5
2
HOH
HOH
73
B
HOH
8
2
HOH
HOH
74
B
HOH
9
2
HOH
HOH
75
B
HOH
10
2
HOH
HOH
76
B
HOH
11
2
HOH
HOH
77
B
HOH
12
2
HOH
HOH
78
B
HOH
16
2
HOH
HOH
79
B
HOH
22
2
HOH
HOH
80
B
HOH
23
2
HOH
HOH
81
B
HOH
24
2
HOH
HOH
82
B
HOH
25
2
HOH
HOH
83
B
n
1
0
A
n
2
1
A
n
3
2
A
n
4
3
A
n
5
4
A
n
6
5
A
n
7
6
A
n
8
7
A
n
9
8
A
n
10
9
A
n
11
10
A
ASP
11
n
12
ASP
11
A
VAL
12
n
13
VAL
12
A
ARG
13
n
14
ARG
13
A
HIS
14
n
15
HIS
14
A
HIS
15
n
16
HIS
15
A
PHE
16
n
17
PHE
16
A
THR
17
n
18
THR
17
A
PRO
18
n
19
PRO
18
A
SER
19
n
20
SER
19
A
GLU
20
n
21
GLU
20
A
ARG
21
n
22
ARG
21
A
GLN
22
n
23
GLN
22
A
LEU
23
n
24
LEU
23
A
CYS
24
n
25
CYS
24
A
LEU
25
n
26
LEU
25
A
SER
26
n
27
SER
26
A
SER
27
n
28
SER
27
A
ILE
28
n
29
ILE
28
A
GLN
29
n
30
GLN
29
A
THR
30
n
31
THR
30
A
ALA
31
n
32
ALA
31
A
PHE
32
n
33
PHE
32
A
ASN
33
n
34
ASN
33
A
GLN
34
n
35
GLN
34
A
GLY
35
n
36
GLY
35
A
ALA
36
n
37
ALA
36
A
GLY
37
n
38
GLY
37
A
THR
38
n
39
THR
38
A
CYS
39
n
40
CYS
39
A
THR
40
n
41
THR
40
A
LEU
41
n
42
LEU
41
A
SER
42
n
43
SER
42
A
ASP
43
n
44
ASP
43
A
SER
44
n
45
SER
44
A
GLY
45
n
46
GLY
45
A
ARG
46
n
47
ARG
46
A
ILE
47
n
48
ILE
47
A
SER
48
n
49
SER
48
A
TYR
49
n
50
TYR
49
A
THR
50
n
51
THR
50
A
VAL
51
n
52
VAL
51
A
GLU
52
n
53
GLU
52
A
PHE
53
n
54
PHE
53
A
SER
54
n
55
SER
54
A
LEU
55
n
56
LEU
55
A
PRO
56
n
57
PRO
56
A
THR
57
n
58
THR
57
A
HIS
58
n
59
HIS
58
A
HIS
59
n
60
HIS
59
A
THR
60
n
61
THR
60
A
VAL
61
n
62
VAL
61
A
ARG
62
n
63
ARG
62
A
LEU
63
n
64
LEU
63
A
ILE
64
n
65
ILE
64
A
ARG
65
n
66
ARG
65
A
VAL
66
n
67
VAL
66
A
THR
67
n
68
THR
67
A
n
69
68
A
n
70
69
A
n
71
70
A
n
72
71
A
n
73
72
A
n
1
0
B
n
2
1
B
n
3
2
B
n
4
3
B
n
5
4
B
n
6
5
B
n
7
6
B
n
8
7
B
n
9
8
B
n
10
9
B
n
11
10
B
ASP
11
n
12
ASP
11
B
VAL
12
n
13
VAL
12
B
ARG
13
n
14
ARG
13
B
HIS
14
n
15
HIS
14
B
HIS
15
n
16
HIS
15
B
PHE
16
n
17
PHE
16
B
THR
17
n
18
THR
17
B
PRO
18
n
19
PRO
18
B
SER
19
n
20
SER
19
B
GLU
20
n
21
GLU
20
B
ARG
21
n
22
ARG
21
B
GLN
22
n
23
GLN
22
B
LEU
23
n
24
LEU
23
B
CYS
24
n
25
CYS
24
B
LEU
25
n
26
LEU
25
B
SER
26
n
27
SER
26
B
SER
27
n
28
SER
27
B
ILE
28
n
29
ILE
28
B
GLN
29
n
30
GLN
29
B
THR
30
n
31
THR
30
B
ALA
31
n
32
ALA
31
B
PHE
32
n
33
PHE
32
B
ASN
33
n
34
ASN
33
B
GLN
34
n
35
GLN
34
B
GLY
35
n
36
GLY
35
B
ALA
36
n
37
ALA
36
B
GLY
37
n
38
GLY
37
B
THR
38
n
39
THR
38
B
CYS
39
n
40
CYS
39
B
THR
40
n
41
THR
40
B
LEU
41
n
42
LEU
41
B
SER
42
n
43
SER
42
B
ASP
43
n
44
ASP
43
B
SER
44
n
45
SER
44
B
GLY
45
n
46
GLY
45
B
ARG
46
n
47
ARG
46
B
ILE
47
n
48
ILE
47
B
SER
48
n
49
SER
48
B
TYR
49
n
50
TYR
49
B
THR
50
n
51
THR
50
B
VAL
51
n
52
VAL
51
B
GLU
52
n
53
GLU
52
B
PHE
53
n
54
PHE
53
B
SER
54
n
55
SER
54
B
LEU
55
n
56
LEU
55
B
PRO
56
n
57
PRO
56
B
THR
57
n
58
THR
57
B
HIS
58
n
59
HIS
58
B
HIS
59
n
60
HIS
59
B
THR
60
n
61
THR
60
B
VAL
61
n
62
VAL
61
B
ARG
62
n
63
ARG
62
B
LEU
63
n
64
LEU
63
B
ILE
64
n
65
ILE
64
B
ARG
65
n
66
ARG
65
B
VAL
66
n
67
VAL
66
B
THR
67
n
68
THR
67
B
n
69
68
B
n
70
69
B
n
71
70
B
n
72
71
B
n
73
72
B
4.9303
-2.9232
5.6522
3.4621
-2.7738
14.9435
-0.4573
-0.3117
-0.1755
0.3604
0.3011
0.0799
0.3873
-0.0079
0.1562
0.2895
-0.0847
0.0475
0.0578
0.0277
0.2151
refined
2.7765
24.9391
71.3211
X-RAY DIFFRACTION
5.1378
-0.1231
3.4222
2.8517
-3.7649
11.6343
-0.4165
0.1511
0.1427
-0.1320
0.3139
0.4243
0.1200
-0.5287
0.1026
0.2450
-0.1053
-0.0117
0.0455
-0.0022
0.2378
refined
-3.2470
27.2156
59.6228
X-RAY DIFFRACTION
A
11
A
12
A
67
A
68
X-RAY DIFFRACTION
1
B
11
B
12
B
67
B
68
X-RAY DIFFRACTION
2
author_and_software_defined_assembly
PISA
2
dimeric
3070
-15
6460
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
THR
40
A
N
THR
41
A
O
SER
48
A
O
SER
49
A
N
PHE
53
A
N
PHE
54
B
O
ILE
47
B
O
ILE
48
B
O
SER
48
B
O
SER
49
B
N
THR
40
B
N
THR
41
1
A
MET
0
A
MET
1
1
Y
1
A
ALA
1
A
ALA
2
1
Y
1
A
HIS
2
A
HIS
3
1
Y
1
A
HIS
3
A
HIS
4
1
Y
1
A
HIS
4
A
HIS
5
1
Y
1
A
HIS
5
A
HIS
6
1
Y
1
A
HIS
6
A
HIS
7
1
Y
1
A
HIS
7
A
HIS
8
1
Y
1
A
THR
8
A
THR
9
1
Y
1
A
GLU
9
A
GLU
10
1
Y
1
A
ASP
10
A
ASP
11
1
Y
1
A
ALA
68
A
ALA
69
1
Y
1
A
SER
69
A
SER
70
1
Y
1
A
PRO
70
A
PRO
71
1
Y
1
A
SER
71
A
SER
72
1
Y
1
A
ALA
72
A
ALA
73
1
Y
1
B
MET
0
B
MET
1
1
Y
1
B
ALA
1
B
ALA
2
1
Y
1
B
HIS
2
B
HIS
3
1
Y
1
B
HIS
3
B
HIS
4
1
Y
1
B
HIS
4
B
HIS
5
1
Y
1
B
HIS
5
B
HIS
6
1
Y
1
B
HIS
6
B
HIS
7
1
Y
1
B
HIS
7
B
HIS
8
1
Y
1
B
THR
8
B
THR
9
1
Y
1
B
GLU
9
B
GLU
10
1
Y
1
B
ASP
10
B
ASP
11
1
Y
1
B
ALA
68
B
ALA
69
1
Y
1
B
SER
69
B
SER
70
1
Y
1
B
PRO
70
B
PRO
71
1
Y
1
B
SER
71
B
SER
72
1
Y
1
B
ALA
72
B
ALA
73
1
Y
1
-11.91
1.90
111.40
99.49
A
A
A
CB
CA
C
VAL
VAL
VAL
51
51
51
N
18.847
2.81
1.40
0.00
2.81
0.00
-4.21
0.936
0.878
0.26659
0.20989
0.2124
0.2124
2.60
10.00
210
4456
4456
4.5
100.00
11.008
0.232
RANDOM
LIKELY RESIDUAL
1
THROUGHOUT
-2.0
S-SAD
0.609
0.320
0.80
0.80
1.40
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
2.60
10.00
24
918
0
0
894
0.015
0.021
904
1.766
1.915
1228
6.704
5.000
112
0.129
0.200
148
0.006
0.020
676
0.253
0.200
396
0.272
0.200
41
0.186
0.200
20
0.159
0.200
3
0.621
1.500
566
1.176
2.000
924
2.109
3.000
338
3.540
4.500
304
0.278
0.247
2.708
23
493
12
2.6
25.0
1P65
4813
4813
-3.0
-3.0
0.041
1
24.6
19.9
99.0
0.22
2.6
2.68
12.0
389
1
100.0
refinement
REFMAC
5.1.24
data reduction
DENZO
data scaling
SCALEPACK
phasing
SOLVE
Crystal structure of the nucleocapsid protein of porcine reproductive and respiratory syndrome virus (PRRSV)
1
N
N
1
N
N
2
N
N
2
N
N
A
ASP
11
A
ASP
12
HELX_P
A
PHE
16
A
PHE
17
5
1
6
A
THR
17
A
THR
18
HELX_P
A
GLY
35
A
GLY
36
1
2
19
A
PRO
56
A
PRO
57
HELX_P
A
THR
67
A
THR
68
1
3
12
B
ASP
11
B
ASP
12
HELX_P
B
PHE
16
B
PHE
17
5
4
6
B
THR
17
B
THR
18
HELX_P
B
GLY
35
B
GLY
36
1
5
19
B
PRO
56
B
PRO
57
HELX_P
B
VAL
66
B
VAL
67
1
6
11
VIRAL PROTEIN
virus, nucleocapsid, Viral protein
Q9YJI1_PRRSV
UNP
1
59
Q9YJI1
TEDDVRHHFTPSERQLCLSSIQTAFNQGAGTCTLSDSGRISYTVEFSLPTHHTVRLIRVTASPSA
59
123
1P65
8
72
Q9YJI1
A
1
9
73
59
123
1P65
8
72
Q9YJI1
B
1
9
73
1
expression tag
MET
0
1P65
A
Q9YJI1
UNP
1
1
expression tag
ALA
1
1P65
A
Q9YJI1
UNP
2
1
expression tag
HIS
2
1P65
A
Q9YJI1
UNP
3
1
expression tag
HIS
3
1P65
A
Q9YJI1
UNP
4
1
expression tag
HIS
4
1P65
A
Q9YJI1
UNP
5
1
expression tag
HIS
5
1P65
A
Q9YJI1
UNP
6
1
expression tag
HIS
6
1P65
A
Q9YJI1
UNP
7
1
expression tag
HIS
7
1P65
A
Q9YJI1
UNP
8
2
expression tag
MET
0
1P65
B
Q9YJI1
UNP
1
2
expression tag
ALA
1
1P65
B
Q9YJI1
UNP
2
2
expression tag
HIS
2
1P65
B
Q9YJI1
UNP
3
2
expression tag
HIS
3
1P65
B
Q9YJI1
UNP
4
2
expression tag
HIS
4
1P65
B
Q9YJI1
UNP
5
2
expression tag
HIS
5
1P65
B
Q9YJI1
UNP
6
2
expression tag
HIS
6
1P65
B
Q9YJI1
UNP
7
2
expression tag
HIS
7
1P65
B
Q9YJI1
UNP
8
4
anti-parallel
anti-parallel
anti-parallel
A
THR
38
A
THR
39
A
LEU
41
A
LEU
42
A
ILE
47
A
ILE
48
A
PHE
53
A
PHE
54
B
ILE
47
B
ILE
48
B
PHE
53
B
PHE
54
B
THR
38
B
THR
39
B
LEU
41
B
LEU
42
154
P 32 2 1