0.011119
0.000000
0.000000
0.000000
0.011119
0.000000
0.000000
0.000000
0.013525
0.00000
0.00000
0.00000
Antikainen, N.M.
Monzingo, A.F.
Franklin, C.L.
Robertus, J.D.
Martin, S.F.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
89.933
89.933
73.936
C21 H42 N O7 P
451.534
(3S)-3,4-DI-N-HEXANOYLOXYBUTYL-1-PHOSPHOCHOLINE
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
C
N
2
N
C
N
3
N
C
N
4
N
C
N
5
N
C
N
6
N
C
N
7
N
O
N
8
N
O
N
9
N
C
N
10
S
C
N
11
N
O
N
12
N
C
N
13
N
O
N
14
N
C
N
15
N
C
N
16
N
C
N
17
N
C
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
P
N
22
N
O
N
23
N
O
N
24
N
O
N
25
N
C
N
26
N
C
N
27
N
N
N
28
N
C
N
29
N
C
N
30
N
C
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
N
N
74
S
C
N
75
N
C
N
76
N
O
N
77
N
C
N
78
N
O
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
N
N
87
S
C
N
88
N
C
N
89
N
O
N
90
N
C
N
91
N
C
N
92
N
C
N
93
N
N
N
94
N
C
N
95
N
N
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
S
C
N
115
N
C
N
116
N
O
N
117
N
C
N
118
N
C
N
119
N
O
N
120
N
N
N
121
N
O
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
N
N
131
S
C
N
132
N
C
N
133
N
O
N
134
N
C
N
135
N
C
N
136
N
O
N
137
N
O
N
138
N
O
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
N
N
147
S
C
N
148
N
C
N
149
N
O
N
150
N
C
N
151
N
C
N
152
N
C
N
153
N
O
N
154
N
N
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
N
N
167
S
C
N
168
N
C
N
169
N
O
N
170
N
C
N
171
N
C
N
172
N
C
N
173
N
O
N
174
N
O
N
175
N
O
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
N
N
186
N
C
N
187
N
C
N
188
N
O
N
189
N
O
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
N
N
196
S
C
N
197
N
C
N
198
N
O
N
199
N
C
Y
200
N
C
Y
201
N
N
Y
202
N
C
Y
203
N
C
Y
204
N
N
N
205
N
O
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
O
N
217
N
H
N
218
N
H
N
219
N
N
N
220
S
C
N
221
N
C
N
222
N
O
N
223
S
C
N
224
N
C
N
225
N
C
N
226
N
C
N
227
N
O
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
N
N
242
S
C
N
243
N
C
N
244
N
O
N
245
N
C
N
246
N
C
N
247
N
C
N
248
N
C
N
249
N
O
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
N
N
264
S
C
N
265
N
C
N
266
N
O
N
267
N
C
N
268
N
C
N
269
N
C
N
270
N
C
N
271
N
N
N
272
N
O
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
N
N
289
S
C
N
290
N
C
N
291
N
O
N
292
N
C
N
293
N
C
N
294
N
S
N
295
N
C
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
N
N
309
S
C
N
310
N
C
N
311
N
O
N
312
N
C
Y
313
N
C
Y
314
N
C
Y
315
N
C
Y
316
N
C
Y
317
N
C
Y
318
N
C
N
319
N
O
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
N
N
332
S
C
N
333
N
C
N
334
N
O
N
335
N
C
N
336
N
C
N
337
N
C
N
338
N
O
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
N
353
N
O
N
354
N
O
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
N
N
363
S
C
N
364
N
C
N
365
N
O
N
366
R
C
N
367
N
O
N
368
N
C
N
369
N
O
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
N
N
380
S
C
N
381
N
C
N
382
N
O
N
383
N
C
Y
384
N
C
Y
385
N
C
Y
386
N
C
Y
387
N
N
Y
388
N
C
Y
389
N
C
Y
390
N
C
Y
391
N
C
Y
392
N
C
N
393
N
O
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
N
N
407
S
C
N
408
N
C
N
409
N
O
N
410
N
C
Y
411
N
C
Y
412
N
C
Y
413
N
C
Y
414
N
C
Y
415
N
C
Y
416
N
C
N
417
N
O
N
418
N
O
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
N
N
431
S
C
N
432
N
C
N
433
N
O
N
434
N
C
N
435
N
C
N
436
N
C
N
437
N
O
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
ZN
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
doub
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
doub
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
doub
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
doub
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
doub
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
doub
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
doub
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
doub
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
doub
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
doub
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
doub
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
doub
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
doub
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
Y
198
N
sing
Y
199
N
doub
Y
200
N
doub
N
201
N
sing
Y
202
N
sing
N
203
N
sing
Y
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
doub
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
doub
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
doub
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
doub
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
Y
306
N
doub
Y
307
N
sing
Y
308
N
sing
N
309
N
sing
Y
310
N
doub
N
311
N
sing
Y
312
N
doub
N
313
N
sing
Y
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
doub
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
doub
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
doub
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
doub
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
Y
375
N
doub
Y
376
N
sing
Y
377
N
sing
N
378
N
sing
Y
379
N
doub
Y
380
N
sing
Y
381
N
sing
N
382
N
sing
Y
383
N
sing
Y
384
N
doub
N
385
N
sing
Y
386
N
doub
N
387
N
sing
Y
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
doub
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
Y
403
N
doub
Y
404
N
sing
Y
405
N
sing
N
406
N
sing
Y
407
N
doub
N
408
N
sing
Y
409
N
doub
N
410
N
sing
Y
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
doub
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
US
Arch.Biochem.Biophys.
ABBIA4
0158
0003-9861
417
81
86
10.1016/S0003-9861(03)00343-6
12921783
Using X-ray crystallography of the Asp55Asn mutant of the phosphatidylcholine-preferring phospholipase C from Bacillus cereus to support the mechanistic role of Asp55 as the general base.
2003
10.2210/pdb1p6d/pdb
pdb_00001p6d
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
298
1
MIRRORS
IMAGE PLATE
2000-05-18
RIGAKU RAXIS IV
DOUBLE FOCUSING MIRRORS (NI&PT) +NI FILTER
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
28422.436
PHOSPHOLIPASE C
3.1.4.3
D55N
1
man
polymer
65.409
ZINC ION
3
syn
non-polymer
451.534
(3S)-3,4-DI-N-HEXANOYLOXYBUTYL-1-PHOSPHOCHOLINE
1
syn
non-polymer
18.015
water
86
nat
water
PLC, Phosphatidylcholine cholinephosphohydrolase, Cereolysin A
no
no
WSAEDKHKEGVNSHLWIVNRAIDIMSRNTTLVKQDRVAQLNEWRTELENGIYAANYENPYYDNSTFASHFYDPDNGKTYI
PFAKQAKETGAKYFKLAGESYKNKDMKQAFFYLGLSLHYLGDVNQPMHAANFTNLSYPQGFHSKYENFVDTIKDNYKVTD
GNGYWNWKGTNPEEWIHGAAVVAKQDYSGIVNDNTKDWFVKAAVSQEYADKWRAEVTPMTGKRLMDAQRVTAGYIQLWFD
TYGDR
WSAEDKHKEGVNSHLWIVNRAIDIMSRNTTLVKQDRVAQLNEWRTELENGIYAANYENPYYDNSTFASHFYDPDNGKTYI
PFAKQAKETGAKYFKLAGESYKNKDMKQAFFYLGLSLHYLGDVNQPMHAANFTNLSYPQGFHSKYENFVDTIKDNYKVTD
GNGYWNWKGTNPEEWIHGAAVVAKQDYSGIVNDNTKDWFVKAAVSQEYADKWRAEVTPMTGKRLMDAQRVTAGYIQLWFD
TYGDR
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Bacillus
Escherichia
sample
plc
1396
Bacillus cereus
562
Escherichia coli
DH5-ALPHA
plasmid
pMAL-C2
1
2.63
53.22
VAPOR DIFFUSION, SITTING DROP
6
AMMOUNIUM SULPHATE, pH 6, VAPOR DIFFUSION, SITTING DROP, temperature 298K
298
database_2
pdbx_struct_conn_angle
struct_conn
struct_ref_seq_dif
struct_site
chem_comp_atom
chem_comp_bond
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Data collection
Refinement description
1
0
2003-09-30
1
1
2008-04-29
1
2
2011-07-13
1
3
2021-10-27
1
4
2023-08-16
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
PHOSPHOLIPASE C FROM BACILLUS CEREUS
THE D55N MUTANT OF PHOSPHOLIPASE C FROM BACILLUS CEREUS
THE D55N MUTANT OF PHOSPHOLIPASE C FROM BACILLUS CEREUS WITH 1,2-DI-N-PENTANOYL-SN-GLYCERO-3-DITHIOPHOSPHOCHOLINE
RCSB
Y
RCSB
2003-04-29
REL
REL
ZN
ZINC ION
3PC
(3S)-3,4-DI-N-HEXANOYLOXYBUTYL-1-PHOSPHOCHOLINE
HOH
water
1AH7
PDB ENTRY 1AH7
PDB
experimental model
ZN2
246
2
ZN
ZN
246
A
ZN2
247
2
ZN
ZN
247
A
ZN2
248
2
ZN
ZN
248
A
HPC
601
3
3PC
3PC
601
A
HOH
252
4
HOH
HOH
252
A
HOH
253
4
HOH
HOH
253
A
HOH
255
4
HOH
HOH
255
A
HOH
257
4
HOH
HOH
257
A
HOH
258
4
HOH
HOH
258
A
HOH
260
4
HOH
HOH
260
A
HOH
261
4
HOH
HOH
261
A
HOH
262
4
HOH
HOH
262
A
HOH
263
4
HOH
HOH
263
A
HOH
264
4
HOH
HOH
264
A
HOH
265
4
HOH
HOH
265
A
HOH
266
4
HOH
HOH
266
A
HOH
267
4
HOH
HOH
267
A
HOH
268
4
HOH
HOH
268
A
HOH
269
4
HOH
HOH
269
A
HOH
270
4
HOH
HOH
270
A
HOH
271
4
HOH
HOH
271
A
HOH
273
4
HOH
HOH
273
A
HOH
274
4
HOH
HOH
274
A
HOH
275
4
HOH
HOH
275
A
HOH
277
4
HOH
HOH
277
A
HOH
278
4
HOH
HOH
278
A
HOH
279
4
HOH
HOH
279
A
HOH
280
4
HOH
HOH
280
A
HOH
281
4
HOH
HOH
281
A
HOH
282
4
HOH
HOH
282
A
HOH
284
4
HOH
HOH
284
A
HOH
285
4
HOH
HOH
285
A
HOH
288
4
HOH
HOH
288
A
HOH
289
4
HOH
HOH
289
A
HOH
290
4
HOH
HOH
290
A
HOH
291
4
HOH
HOH
291
A
HOH
292
4
HOH
HOH
292
A
HOH
294
4
HOH
HOH
294
A
HOH
295
4
HOH
HOH
295
A
HOH
296
4
HOH
HOH
296
A
HOH
297
4
HOH
HOH
297
A
HOH
298
4
HOH
HOH
298
A
HOH
299
4
HOH
HOH
299
A
HOH
300
4
HOH
HOH
300
A
HOH
301
4
HOH
HOH
301
A
HOH
303
4
HOH
HOH
303
A
HOH
304
4
HOH
HOH
304
A
HOH
306
4
HOH
HOH
306
A
HOH
309
4
HOH
HOH
309
A
HOH
311
4
HOH
HOH
311
A
HOH
312
4
HOH
HOH
312
A
HOH
315
4
HOH
HOH
315
A
HOH
317
4
HOH
HOH
317
A
HOH
319
4
HOH
HOH
319
A
HOH
321
4
HOH
HOH
321
A
HOH
322
4
HOH
HOH
322
A
HOH
323
4
HOH
HOH
323
A
HOH
324
4
HOH
HOH
324
A
HOH
325
4
HOH
HOH
325
A
HOH
328
4
HOH
HOH
328
A
HOH
329
4
HOH
HOH
329
A
HOH
330
4
HOH
HOH
330
A
HOH
331
4
HOH
HOH
331
A
HOH
332
4
HOH
HOH
332
A
HOH
333
4
HOH
HOH
333
A
HOH
334
4
HOH
HOH
334
A
HOH
335
4
HOH
HOH
335
A
HOH
337
4
HOH
HOH
337
A
HOH
340
4
HOH
HOH
340
A
HOH
346
4
HOH
HOH
346
A
HOH
348
4
HOH
HOH
348
A
HOH
358
4
HOH
HOH
358
A
HOH
364
4
HOH
HOH
364
A
HOH
367
4
HOH
HOH
367
A
HOH
372
4
HOH
HOH
372
A
HOH
373
4
HOH
HOH
373
A
HOH
376
4
HOH
HOH
376
A
HOH
383
4
HOH
HOH
383
A
HOH
388
4
HOH
HOH
388
A
HOH
415
4
HOH
HOH
415
A
HOH
418
4
HOH
HOH
418
A
HOH
420
4
HOH
HOH
420
A
HOH
432
4
HOH
HOH
432
A
HOH
434
4
HOH
HOH
434
A
HOH
451
4
HOH
HOH
451
A
HOH
454
4
HOH
HOH
454
A
HOH
502
4
HOH
HOH
502
A
HOH
504
4
HOH
HOH
504
A
HOH
506
4
HOH
HOH
506
A
HOH
518
4
HOH
HOH
518
A
TRP
1
n
1
TRP
1
A
SER
2
n
2
SER
2
A
ALA
3
n
3
ALA
3
A
GLU
4
n
4
GLU
4
A
ASP
5
n
5
ASP
5
A
LYS
6
n
6
LYS
6
A
HIS
7
n
7
HIS
7
A
LYS
8
n
8
LYS
8
A
GLU
9
n
9
GLU
9
A
GLY
10
n
10
GLY
10
A
VAL
11
n
11
VAL
11
A
ASN
12
n
12
ASN
12
A
SER
13
n
13
SER
13
A
HIS
14
n
14
HIS
14
A
LEU
15
n
15
LEU
15
A
TRP
16
n
16
TRP
16
A
ILE
17
n
17
ILE
17
A
VAL
18
n
18
VAL
18
A
ASN
19
n
19
ASN
19
A
ARG
20
n
20
ARG
20
A
ALA
21
n
21
ALA
21
A
ILE
22
n
22
ILE
22
A
ASP
23
n
23
ASP
23
A
ILE
24
n
24
ILE
24
A
MET
25
n
25
MET
25
A
SER
26
n
26
SER
26
A
ARG
27
n
27
ARG
27
A
ASN
28
n
28
ASN
28
A
THR
29
n
29
THR
29
A
THR
30
n
30
THR
30
A
LEU
31
n
31
LEU
31
A
VAL
32
n
32
VAL
32
A
LYS
33
n
33
LYS
33
A
GLN
34
n
34
GLN
34
A
ASP
35
n
35
ASP
35
A
ARG
36
n
36
ARG
36
A
VAL
37
n
37
VAL
37
A
ALA
38
n
38
ALA
38
A
GLN
39
n
39
GLN
39
A
LEU
40
n
40
LEU
40
A
ASN
41
n
41
ASN
41
A
GLU
42
n
42
GLU
42
A
TRP
43
n
43
TRP
43
A
ARG
44
n
44
ARG
44
A
THR
45
n
45
THR
45
A
GLU
46
n
46
GLU
46
A
LEU
47
n
47
LEU
47
A
GLU
48
n
48
GLU
48
A
ASN
49
n
49
ASN
49
A
GLY
50
n
50
GLY
50
A
ILE
51
n
51
ILE
51
A
TYR
52
n
52
TYR
52
A
ALA
53
n
53
ALA
53
A
ALA
54
n
54
ALA
54
A
ASN
55
n
55
ASN
55
A
TYR
56
n
56
TYR
56
A
GLU
57
n
57
GLU
57
A
ASN
58
n
58
ASN
58
A
PRO
59
n
59
PRO
59
A
TYR
60
n
60
TYR
60
A
TYR
61
n
61
TYR
61
A
ASP
62
n
62
ASP
62
A
ASN
63
n
63
ASN
63
A
SER
64
n
64
SER
64
A
THR
65
n
65
THR
65
A
PHE
66
n
66
PHE
66
A
ALA
67
n
67
ALA
67
A
SER
68
n
68
SER
68
A
HIS
69
n
69
HIS
69
A
PHE
70
n
70
PHE
70
A
TYR
71
n
71
TYR
71
A
ASP
72
n
72
ASP
72
A
PRO
73
n
73
PRO
73
A
ASP
74
n
74
ASP
74
A
ASN
75
n
75
ASN
75
A
GLY
76
n
76
GLY
76
A
LYS
77
n
77
LYS
77
A
THR
78
n
78
THR
78
A
TYR
79
n
79
TYR
79
A
ILE
80
n
80
ILE
80
A
PRO
81
n
81
PRO
81
A
PHE
82
n
82
PHE
82
A
ALA
83
n
83
ALA
83
A
LYS
84
n
84
LYS
84
A
GLN
85
n
85
GLN
85
A
ALA
86
n
86
ALA
86
A
LYS
87
n
87
LYS
87
A
GLU
88
n
88
GLU
88
A
THR
89
n
89
THR
89
A
GLY
90
n
90
GLY
90
A
ALA
91
n
91
ALA
91
A
LYS
92
n
92
LYS
92
A
TYR
93
n
93
TYR
93
A
PHE
94
n
94
PHE
94
A
LYS
95
n
95
LYS
95
A
LEU
96
n
96
LEU
96
A
ALA
97
n
97
ALA
97
A
GLY
98
n
98
GLY
98
A
GLU
99
n
99
GLU
99
A
SER
100
n
100
SER
100
A
TYR
101
n
101
TYR
101
A
LYS
102
n
102
LYS
102
A
ASN
103
n
103
ASN
103
A
LYS
104
n
104
LYS
104
A
ASP
105
n
105
ASP
105
A
MET
106
n
106
MET
106
A
LYS
107
n
107
LYS
107
A
GLN
108
n
108
GLN
108
A
ALA
109
n
109
ALA
109
A
PHE
110
n
110
PHE
110
A
PHE
111
n
111
PHE
111
A
TYR
112
n
112
TYR
112
A
LEU
113
n
113
LEU
113
A
GLY
114
n
114
GLY
114
A
LEU
115
n
115
LEU
115
A
SER
116
n
116
SER
116
A
LEU
117
n
117
LEU
117
A
HIS
118
n
118
HIS
118
A
TYR
119
n
119
TYR
119
A
LEU
120
n
120
LEU
120
A
GLY
121
n
121
GLY
121
A
ASP
122
n
122
ASP
122
A
VAL
123
n
123
VAL
123
A
ASN
124
n
124
ASN
124
A
GLN
125
n
125
GLN
125
A
PRO
126
n
126
PRO
126
A
MET
127
n
127
MET
127
A
HIS
128
n
128
HIS
128
A
ALA
129
n
129
ALA
129
A
ALA
130
n
130
ALA
130
A
ASN
131
n
131
ASN
131
A
PHE
132
n
132
PHE
132
A
THR
133
n
133
THR
133
A
ASN
134
n
134
ASN
134
A
LEU
135
n
135
LEU
135
A
SER
136
n
136
SER
136
A
TYR
137
n
137
TYR
137
A
PRO
138
n
138
PRO
138
A
GLN
139
n
139
GLN
139
A
GLY
140
n
140
GLY
140
A
PHE
141
n
141
PHE
141
A
HIS
142
n
142
HIS
142
A
SER
143
n
143
SER
143
A
LYS
144
n
144
LYS
144
A
TYR
145
n
145
TYR
145
A
GLU
146
n
146
GLU
146
A
ASN
147
n
147
ASN
147
A
PHE
148
n
148
PHE
148
A
VAL
149
n
149
VAL
149
A
ASP
150
n
150
ASP
150
A
THR
151
n
151
THR
151
A
ILE
152
n
152
ILE
152
A
LYS
153
n
153
LYS
153
A
ASP
154
n
154
ASP
154
A
ASN
155
n
155
ASN
155
A
TYR
156
n
156
TYR
156
A
LYS
157
n
157
LYS
157
A
VAL
158
n
158
VAL
158
A
THR
159
n
159
THR
159
A
ASP
160
n
160
ASP
160
A
GLY
161
n
161
GLY
161
A
ASN
162
n
162
ASN
162
A
GLY
163
n
163
GLY
163
A
TYR
164
n
164
TYR
164
A
TRP
165
n
165
TRP
165
A
ASN
166
n
166
ASN
166
A
TRP
167
n
167
TRP
167
A
LYS
168
n
168
LYS
168
A
GLY
169
n
169
GLY
169
A
THR
170
n
170
THR
170
A
ASN
171
n
171
ASN
171
A
PRO
172
n
172
PRO
172
A
GLU
173
n
173
GLU
173
A
GLU
174
n
174
GLU
174
A
TRP
175
n
175
TRP
175
A
ILE
176
n
176
ILE
176
A
HIS
177
n
177
HIS
177
A
GLY
178
n
178
GLY
178
A
ALA
179
n
179
ALA
179
A
ALA
180
n
180
ALA
180
A
VAL
181
n
181
VAL
181
A
VAL
182
n
182
VAL
182
A
ALA
183
n
183
ALA
183
A
LYS
184
n
184
LYS
184
A
GLN
185
n
185
GLN
185
A
ASP
186
n
186
ASP
186
A
TYR
187
n
187
TYR
187
A
SER
188
n
188
SER
188
A
GLY
189
n
189
GLY
189
A
ILE
190
n
190
ILE
190
A
VAL
191
n
191
VAL
191
A
ASN
192
n
192
ASN
192
A
ASP
193
n
193
ASP
193
A
ASN
194
n
194
ASN
194
A
THR
195
n
195
THR
195
A
LYS
196
n
196
LYS
196
A
ASP
197
n
197
ASP
197
A
TRP
198
n
198
TRP
198
A
PHE
199
n
199
PHE
199
A
VAL
200
n
200
VAL
200
A
LYS
201
n
201
LYS
201
A
ALA
202
n
202
ALA
202
A
ALA
203
n
203
ALA
203
A
VAL
204
n
204
VAL
204
A
SER
205
n
205
SER
205
A
GLN
206
n
206
GLN
206
A
GLU
207
n
207
GLU
207
A
TYR
208
n
208
TYR
208
A
ALA
209
n
209
ALA
209
A
ASP
210
n
210
ASP
210
A
LYS
211
n
211
LYS
211
A
TRP
212
n
212
TRP
212
A
ARG
213
n
213
ARG
213
A
ALA
214
n
214
ALA
214
A
GLU
215
n
215
GLU
215
A
VAL
216
n
216
VAL
216
A
THR
217
n
217
THR
217
A
PRO
218
n
218
PRO
218
A
MET
219
n
219
MET
219
A
THR
220
n
220
THR
220
A
GLY
221
n
221
GLY
221
A
LYS
222
n
222
LYS
222
A
ARG
223
n
223
ARG
223
A
LEU
224
n
224
LEU
224
A
MET
225
n
225
MET
225
A
ASP
226
n
226
ASP
226
A
ALA
227
n
227
ALA
227
A
GLN
228
n
228
GLN
228
A
ARG
229
n
229
ARG
229
A
VAL
230
n
230
VAL
230
A
THR
231
n
231
THR
231
A
ALA
232
n
232
ALA
232
A
GLY
233
n
233
GLY
233
A
TYR
234
n
234
TYR
234
A
ILE
235
n
235
ILE
235
A
GLN
236
n
236
GLN
236
A
LEU
237
n
237
LEU
237
A
TRP
238
n
238
TRP
238
A
PHE
239
n
239
PHE
239
A
ASP
240
n
240
ASP
240
A
THR
241
n
241
THR
241
A
TYR
242
n
242
TYR
242
A
GLY
243
n
243
GLY
243
A
ASP
244
n
244
ASP
244
A
ARG
245
n
245
ARG
245
A
author_defined_assembly
1
monomeric
A
TRP
1
A
N
TRP
1
1_555
A
ZN
248
D
ZN
ZN
1_555
A
TRP
1
A
O
TRP
1
1_555
74.6
A
TRP
1
A
N
TRP
1
1_555
A
ZN
248
D
ZN
ZN
1_555
A
HIS
14
A
NE2
HIS
14
1_555
109.6
A
TRP
1
A
O
TRP
1
1_555
A
ZN
248
D
ZN
ZN
1_555
A
HIS
14
A
NE2
HIS
14
1_555
91.6
A
TRP
1
A
N
TRP
1
1_555
A
ZN
248
D
ZN
ZN
1_555
A
ASP
122
A
OD1
ASP
122
1_555
90.5
A
TRP
1
A
O
TRP
1
1_555
A
ZN
248
D
ZN
ZN
1_555
A
ASP
122
A
OD1
ASP
122
1_555
165.0
A
HIS
14
A
NE2
HIS
14
1_555
A
ZN
248
D
ZN
ZN
1_555
A
ASP
122
A
OD1
ASP
122
1_555
92.1
A
TRP
1
A
N
TRP
1
1_555
A
ZN
248
D
ZN
ZN
1_555
A
3PC
601
E
O3
3PC
1_555
133.7
A
TRP
1
A
O
TRP
1
1_555
A
ZN
248
D
ZN
ZN
1_555
A
3PC
601
E
O3
3PC
1_555
93.4
A
HIS
14
A
NE2
HIS
14
1_555
A
ZN
248
D
ZN
ZN
1_555
A
3PC
601
E
O3
3PC
1_555
115.4
A
ASP
122
A
OD1
ASP
122
1_555
A
ZN
248
D
ZN
ZN
1_555
A
3PC
601
E
O3
3PC
1_555
98.1
A
ASN
55
A
OD1
ASN
55
1_555
A
ZN
246
B
ZN
ZN
1_555
A
HIS
69
A
ND1
HIS
69
1_555
79.4
A
ASN
55
A
OD1
ASN
55
1_555
A
ZN
246
B
ZN
ZN
1_555
A
HIS
118
A
NE2
HIS
118
1_555
77.6
A
HIS
69
A
ND1
HIS
69
1_555
A
ZN
246
B
ZN
ZN
1_555
A
HIS
118
A
NE2
HIS
118
1_555
101.5
A
ASN
55
A
OD1
ASN
55
1_555
A
ZN
246
B
ZN
ZN
1_555
A
ASP
122
A
OD2
ASP
122
1_555
172.3
A
HIS
69
A
ND1
HIS
69
1_555
A
ZN
246
B
ZN
ZN
1_555
A
ASP
122
A
OD2
ASP
122
1_555
96.4
A
HIS
118
A
NE2
HIS
118
1_555
A
ZN
246
B
ZN
ZN
1_555
A
ASP
122
A
OD2
ASP
122
1_555
97.1
A
ASN
55
A
OD1
ASN
55
1_555
A
ZN
246
B
ZN
ZN
1_555
A
3PC
601
E
O3
3PC
1_555
78.5
A
HIS
69
A
ND1
HIS
69
1_555
A
ZN
246
B
ZN
ZN
1_555
A
3PC
601
E
O3
3PC
1_555
141.8
A
HIS
118
A
NE2
HIS
118
1_555
A
ZN
246
B
ZN
ZN
1_555
A
3PC
601
E
O3
3PC
1_555
103.7
A
ASP
122
A
OD2
ASP
122
1_555
A
ZN
246
B
ZN
ZN
1_555
A
3PC
601
E
O3
3PC
1_555
108.4
A
HIS
128
A
NE2
HIS
128
1_555
A
ZN
247
C
ZN
ZN
1_555
A
HIS
142
A
NE2
HIS
142
1_555
101.2
A
HIS
128
A
NE2
HIS
128
1_555
A
ZN
247
C
ZN
ZN
1_555
A
GLU
146
A
OE2
GLU
146
1_555
103.4
A
HIS
142
A
NE2
HIS
142
1_555
A
ZN
247
C
ZN
ZN
1_555
A
GLU
146
A
OE2
GLU
146
1_555
100.4
A
HIS
128
A
NE2
HIS
128
1_555
A
ZN
247
C
ZN
ZN
1_555
A
GLU
146
A
OE1
GLU
146
1_555
153.9
A
HIS
142
A
NE2
HIS
142
1_555
A
ZN
247
C
ZN
ZN
1_555
A
GLU
146
A
OE1
GLU
146
1_555
93.6
A
GLU
146
A
OE2
GLU
146
1_555
A
ZN
247
C
ZN
ZN
1_555
A
GLU
146
A
OE1
GLU
146
1_555
52.3
A
HIS
128
A
NE2
HIS
128
1_555
A
ZN
247
C
ZN
ZN
1_555
A
3PC
601
E
O2
3PC
1_555
90.6
A
HIS
142
A
NE2
HIS
142
1_555
A
ZN
247
C
ZN
ZN
1_555
A
3PC
601
E
O2
3PC
1_555
155.3
A
GLU
146
A
OE2
GLU
146
1_555
A
ZN
247
C
ZN
ZN
1_555
A
3PC
601
E
O2
3PC
1_555
97.8
A
GLU
146
A
OE1
GLU
146
1_555
A
ZN
247
C
ZN
ZN
1_555
A
3PC
601
E
O2
3PC
1_555
84.4
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
ALA
3
-160.65
51.87
1
A
TYR
71
-163.53
114.06
1
A
PHE
82
68.72
-1.04
1
A
ASP
244
71.35
115.55
0.203
0.174
0.177
0.177
2.0
20.0
2026
20562
20562
99.3
RANDOM
1
0
0
FOURIER SYNTHESIS
PDB ENTRY 1AH7
Engh & Huber
2.0
20.0
86
2132
33
0
2013
0.006
1.268
2.0
20
1P6D
20598
20598
0.0
0.0
0.074
1
23.7
5.0
99.3
0.181
2.00
2.07
3.6
98.3
data reduction
DENZO
data scaling
SCALEPACK
refinement
CNS
phasing
CNS
STRUCTURE OF THE D55N MUTANT OF PHOSPHOLIPASE C FROM BACILLUS CEREUS IN COMPLEX WITH (3S)-3,4,DI-N-HEXANOYLOXYBUTYL-1-PHOSPHOCHOLINE
1
N
N
2
N
N
2
N
N
2
N
N
3
N
N
4
N
N
A
LYS
8
A
LYS
8
HELX_P
A
VAL
11
A
VAL
11
5
1
4
A
ASN
12
A
ASN
12
HELX_P
A
ASN
28
A
ASN
28
1
2
17
A
GLN
34
A
GLN
34
HELX_P
A
TRP
43
A
TRP
43
1
3
10
A
TRP
43
A
TRP
43
HELX_P
A
ALA
54
A
ALA
54
1
4
12
A
PHE
66
A
PHE
66
HELX_P
A
PHE
70
A
PHE
70
5
5
5
A
GLN
85
A
GLN
85
HELX_P
A
ASN
103
A
ASN
103
1
6
19
A
ASP
105
A
ASP
105
HELX_P
A
VAL
123
A
VAL
123
1
7
19
A
ASN
124
A
ASN
124
HELX_P
A
ALA
130
A
ALA
130
5
8
7
A
GLY
140
A
GLY
140
HELX_P
A
LYS
153
A
LYS
153
1
9
14
A
ASP
154
A
ASP
154
HELX_P
A
LYS
157
A
LYS
157
5
10
4
A
ASN
171
A
ASN
171
HELX_P
A
ASP
186
A
ASP
186
1
11
16
A
TYR
187
A
TYR
187
HELX_P
A
ILE
190
A
ILE
190
5
12
4
A
ASN
192
A
ASN
192
HELX_P
A
ALA
202
A
ALA
202
1
13
11
A
SER
205
A
SER
205
HELX_P
A
GLY
243
A
GLY
243
1
14
39
metalc
2.279
A
TRP
1
A
N
TRP
1
1_555
A
ZN
248
D
ZN
ZN
1_555
metalc
2.259
A
TRP
1
A
O
TRP
1
1_555
A
ZN
248
D
ZN
ZN
1_555
metalc
2.000
A
HIS
14
A
NE2
HIS
14
1_555
A
ZN
248
D
ZN
ZN
1_555
metalc
2.688
A
ASN
55
A
OD1
ASN
55
1_555
A
ZN
246
B
ZN
ZN
1_555
metalc
2.095
A
HIS
69
A
ND1
HIS
69
1_555
A
ZN
246
B
ZN
ZN
1_555
metalc
2.097
A
HIS
118
A
NE2
HIS
118
1_555
A
ZN
246
B
ZN
ZN
1_555
metalc
2.051
A
ASP
122
A
OD2
ASP
122
1_555
A
ZN
246
B
ZN
ZN
1_555
metalc
2.117
A
ASP
122
A
OD1
ASP
122
1_555
A
ZN
248
D
ZN
ZN
1_555
metalc
1.995
A
HIS
128
A
NE2
HIS
128
1_555
A
ZN
247
C
ZN
ZN
1_555
metalc
2.039
A
HIS
142
A
NE2
HIS
142
1_555
A
ZN
247
C
ZN
ZN
1_555
metalc
2.190
A
GLU
146
A
OE2
GLU
146
1_555
A
ZN
247
C
ZN
ZN
1_555
metalc
2.675
A
GLU
146
A
OE1
GLU
146
1_555
A
ZN
247
C
ZN
ZN
1_555
metalc
2.039
A
ZN
246
B
ZN
ZN
1_555
A
3PC
601
E
O3
3PC
1_555
metalc
2.062
A
ZN
247
C
ZN
ZN
1_555
A
3PC
601
E
O2
3PC
1_555
metalc
2.147
A
ZN
248
D
ZN
ZN
1_555
A
3PC
601
E
O3
3PC
1_555
HYDROLASE
TRI ZN2+ METAL CORE, hydrolase
A
ASN
58
A
ASN
58
1
A
PRO
59
A
PRO
59
-0.08
A
TYR
137
A
TYR
137
1
A
PRO
138
A
PRO
138
-0.04
PHLC_BACCE
UNP
1
39
P09598
WSAEDKHKEGVNSHLWIVNRAIDIMSRNTTLVKQDRVAQLNEWRTELENGIYAADYENPYYDNSTFASHFYDPDNGKTYI
PFAKQAKETGAKYFKLAGESYKNKDMKQAFFYLGLSLHYLGDVNQPMHAANFTNLSYPQGFHSKYENFVDTIKDNYKVTD
GNGYWNWKGTNPEEWIHGAAVVAKQDYSGIVNDNTKDWFVKAAVSQEYADKWRAEVTPMTGKRLMDAQRVTAGYIQLWFD
TYGDR
39
283
1P6D
1
245
P09598
A
1
1
245
1
ASP
engineered mutation
ASN
55
1P6D
A
P09598
UNP
93
55
BINDING SITE FOR RESIDUE ZN A 246
A
ZN
246
Software
6
BINDING SITE FOR RESIDUE ZN A 247
A
ZN
247
Software
4
BINDING SITE FOR RESIDUE ZN A 248
A
ZN
248
Software
5
BINDING SITE FOR RESIDUE 3PC A 601
A
3PC
601
Software
18
A
ASN
55
A
ASN
55
6
1_555
A
HIS
69
A
HIS
69
6
1_555
A
HIS
118
A
HIS
118
6
1_555
A
ASP
122
A
ASP
122
6
1_555
A
ZN
248
D
ZN
6
1_555
A
3PC
601
E
3PC
6
1_555
A
HIS
128
A
HIS
128
4
1_555
A
HIS
142
A
HIS
142
4
1_555
A
GLU
146
A
GLU
146
4
1_555
A
3PC
601
E
3PC
4
1_555
A
TRP
1
A
TRP
1
5
1_555
A
HIS
14
A
HIS
14
5
1_555
A
ASP
122
A
ASP
122
5
1_555
A
ZN
246
B
ZN
5
1_555
A
3PC
601
E
3PC
5
1_555
A
TRP
1
A
TRP
1
18
1_555
A
GLU
4
A
GLU
4
18
1_555
A
HIS
14
A
HIS
14
18
1_555
A
ASN
55
A
ASN
55
18
1_555
A
THR
65
A
THR
65
18
1_555
A
PHE
66
A
PHE
66
18
1_555
A
TYR
79
A
TYR
79
18
1_555
A
PRO
81
A
PRO
81
18
7_555
A
HIS
118
A
HIS
118
18
1_555
A
ASP
122
A
ASP
122
18
1_555
A
HIS
128
A
HIS
128
18
1_555
A
THR
133
A
THR
133
18
1_555
A
ASN
134
A
ASN
134
18
1_555
A
SER
143
A
SER
143
18
1_555
A
GLU
146
A
GLU
146
18
1_555
A
ZN
246
B
ZN
18
1_555
A
ZN
247
C
ZN
18
1_555
A
ZN
248
D
ZN
18
1_555
96
P 43 21 2