0.011119 0.000000 0.000000 0.000000 0.011119 0.000000 0.000000 0.000000 0.013525 0.00000 0.00000 0.00000 Antikainen, N.M. Monzingo, A.F. Franklin, C.L. Robertus, J.D. Martin, S.F. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 89.933 89.933 73.936 C21 H42 N O7 P 451.534 (3S)-3,4-DI-N-HEXANOYLOXYBUTYL-1-PHOSPHOCHOLINE non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer N 1 N C N 2 N C N 3 N C N 4 N C N 5 N C N 6 N C N 7 N O N 8 N O N 9 N C N 10 S C N 11 N O N 12 N C N 13 N O N 14 N C N 15 N C N 16 N C N 17 N C N 18 N C N 19 N C N 20 N C N 21 N P N 22 N O N 23 N O N 24 N O N 25 N C N 26 N C N 27 N N N 28 N C N 29 N C N 30 N C N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N N N 74 S C N 75 N C N 76 N O N 77 N C N 78 N O N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N N N 87 S C N 88 N C N 89 N O N 90 N C N 91 N C N 92 N C N 93 N N N 94 N C N 95 N N N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 S C N 115 N C N 116 N O N 117 N C N 118 N C N 119 N O N 120 N N N 121 N O N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N N N 131 S C N 132 N C N 133 N O N 134 N C N 135 N C N 136 N O N 137 N O N 138 N O N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N N N 147 S C N 148 N C N 149 N O N 150 N C N 151 N C N 152 N C N 153 N O N 154 N N N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N N N 167 S C N 168 N C N 169 N O N 170 N C N 171 N C N 172 N C N 173 N O N 174 N O N 175 N O N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N N N 186 N C N 187 N C N 188 N O N 189 N O N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N N N 196 S C N 197 N C N 198 N O N 199 N C Y 200 N C Y 201 N N Y 202 N C Y 203 N C Y 204 N N N 205 N O N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N O N 217 N H N 218 N H N 219 N N N 220 S C N 221 N C N 222 N O N 223 S C N 224 N C N 225 N C N 226 N C N 227 N O N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N N N 242 S C N 243 N C N 244 N O N 245 N C N 246 N C N 247 N C N 248 N C N 249 N O N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N N N 264 S C N 265 N C N 266 N O N 267 N C N 268 N C N 269 N C N 270 N C N 271 N N N 272 N O N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N N N 289 S C N 290 N C N 291 N O N 292 N C N 293 N C N 294 N S N 295 N C N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N N N 309 S C N 310 N C N 311 N O N 312 N C Y 313 N C Y 314 N C Y 315 N C Y 316 N C Y 317 N C Y 318 N C N 319 N O N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N N N 332 S C N 333 N C N 334 N O N 335 N C N 336 N C N 337 N C N 338 N O N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C N 353 N O N 354 N O N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N N N 363 S C N 364 N C N 365 N O N 366 R C N 367 N O N 368 N C N 369 N O N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N N N 380 S C N 381 N C N 382 N O N 383 N C Y 384 N C Y 385 N C Y 386 N C Y 387 N N Y 388 N C Y 389 N C Y 390 N C Y 391 N C Y 392 N C N 393 N O N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N H N 405 N H N 406 N N N 407 S C N 408 N C N 409 N O N 410 N C Y 411 N C Y 412 N C Y 413 N C Y 414 N C Y 415 N C Y 416 N C N 417 N O N 418 N O N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N N N 431 S C N 432 N C N 433 N O N 434 N C N 435 N C N 436 N C N 437 N O N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N ZN N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N doub N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N doub N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N doub N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N doub N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N doub N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N doub N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N doub N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N doub N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N doub N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N doub N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N doub N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N doub N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N doub N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N doub N 194 N sing N 195 N sing N 196 N sing N 197 N sing Y 198 N sing Y 199 N doub Y 200 N doub N 201 N sing Y 202 N sing N 203 N sing Y 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N doub N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N doub N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N doub N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N doub N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N doub N 302 N sing N 303 N sing N 304 N sing N 305 N sing Y 306 N doub Y 307 N sing Y 308 N sing N 309 N sing Y 310 N doub N 311 N sing Y 312 N doub N 313 N sing Y 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N doub N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N doub N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N doub N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N doub N 371 N sing N 372 N sing N 373 N sing N 374 N sing Y 375 N doub Y 376 N sing Y 377 N sing N 378 N sing Y 379 N doub Y 380 N sing Y 381 N sing N 382 N sing Y 383 N sing Y 384 N doub N 385 N sing Y 386 N doub N 387 N sing Y 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N doub N 399 N sing N 400 N sing N 401 N sing N 402 N sing Y 403 N doub Y 404 N sing Y 405 N sing N 406 N sing Y 407 N doub N 408 N sing Y 409 N doub N 410 N sing Y 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N doub N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N sing N 433 N sing US Arch.Biochem.Biophys. ABBIA4 0158 0003-9861 417 81 86 10.1016/S0003-9861(03)00343-6 12921783 Using X-ray crystallography of the Asp55Asn mutant of the phosphatidylcholine-preferring phospholipase C from Bacillus cereus to support the mechanistic role of Asp55 as the general base. 2003 10.2210/pdb1p6d/pdb pdb_00001p6d 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 298 1 MIRRORS IMAGE PLATE 2000-05-18 RIGAKU RAXIS IV DOUBLE FOCUSING MIRRORS (NI&PT) +NI FILTER SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RU200 28422.436 PHOSPHOLIPASE C 3.1.4.3 D55N 1 man polymer 65.409 ZINC ION 3 syn non-polymer 451.534 (3S)-3,4-DI-N-HEXANOYLOXYBUTYL-1-PHOSPHOCHOLINE 1 syn non-polymer 18.015 water 86 nat water PLC, Phosphatidylcholine cholinephosphohydrolase, Cereolysin A no no WSAEDKHKEGVNSHLWIVNRAIDIMSRNTTLVKQDRVAQLNEWRTELENGIYAANYENPYYDNSTFASHFYDPDNGKTYI PFAKQAKETGAKYFKLAGESYKNKDMKQAFFYLGLSLHYLGDVNQPMHAANFTNLSYPQGFHSKYENFVDTIKDNYKVTD GNGYWNWKGTNPEEWIHGAAVVAKQDYSGIVNDNTKDWFVKAAVSQEYADKWRAEVTPMTGKRLMDAQRVTAGYIQLWFD TYGDR WSAEDKHKEGVNSHLWIVNRAIDIMSRNTTLVKQDRVAQLNEWRTELENGIYAANYENPYYDNSTFASHFYDPDNGKTYI PFAKQAKETGAKYFKLAGESYKNKDMKQAFFYLGLSLHYLGDVNQPMHAANFTNLSYPQGFHSKYENFVDTIKDNYKVTD GNGYWNWKGTNPEEWIHGAAVVAKQDYSGIVNDNTKDWFVKAAVSQEYADKWRAEVTPMTGKRLMDAQRVTAGYIQLWFD TYGDR A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Bacillus Escherichia sample plc 1396 Bacillus cereus 562 Escherichia coli DH5-ALPHA plasmid pMAL-C2 1 2.63 53.22 VAPOR DIFFUSION, SITTING DROP 6 AMMOUNIUM SULPHATE, pH 6, VAPOR DIFFUSION, SITTING DROP, temperature 298K 298 database_2 pdbx_struct_conn_angle struct_conn struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond pdbx_initial_refinement_model repository Initial release Version format compliance Version format compliance Database references Derived calculations Data collection Refinement description 1 0 2003-09-30 1 1 2008-04-29 1 2 2011-07-13 1 3 2021-10-27 1 4 2023-08-16 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id PHOSPHOLIPASE C FROM BACILLUS CEREUS THE D55N MUTANT OF PHOSPHOLIPASE C FROM BACILLUS CEREUS THE D55N MUTANT OF PHOSPHOLIPASE C FROM BACILLUS CEREUS WITH 1,2-DI-N-PENTANOYL-SN-GLYCERO-3-DITHIOPHOSPHOCHOLINE RCSB Y RCSB 2003-04-29 REL REL ZN ZINC ION 3PC (3S)-3,4-DI-N-HEXANOYLOXYBUTYL-1-PHOSPHOCHOLINE HOH water 1AH7 PDB ENTRY 1AH7 PDB experimental model ZN2 246 2 ZN ZN 246 A ZN2 247 2 ZN ZN 247 A ZN2 248 2 ZN ZN 248 A HPC 601 3 3PC 3PC 601 A HOH 252 4 HOH HOH 252 A HOH 253 4 HOH HOH 253 A HOH 255 4 HOH HOH 255 A HOH 257 4 HOH HOH 257 A HOH 258 4 HOH HOH 258 A HOH 260 4 HOH HOH 260 A HOH 261 4 HOH HOH 261 A HOH 262 4 HOH HOH 262 A HOH 263 4 HOH HOH 263 A HOH 264 4 HOH HOH 264 A HOH 265 4 HOH HOH 265 A HOH 266 4 HOH HOH 266 A HOH 267 4 HOH HOH 267 A HOH 268 4 HOH HOH 268 A HOH 269 4 HOH HOH 269 A HOH 270 4 HOH HOH 270 A HOH 271 4 HOH HOH 271 A HOH 273 4 HOH HOH 273 A HOH 274 4 HOH HOH 274 A HOH 275 4 HOH HOH 275 A HOH 277 4 HOH HOH 277 A HOH 278 4 HOH HOH 278 A HOH 279 4 HOH HOH 279 A HOH 280 4 HOH HOH 280 A HOH 281 4 HOH HOH 281 A HOH 282 4 HOH HOH 282 A HOH 284 4 HOH HOH 284 A HOH 285 4 HOH HOH 285 A HOH 288 4 HOH HOH 288 A HOH 289 4 HOH HOH 289 A HOH 290 4 HOH HOH 290 A HOH 291 4 HOH HOH 291 A HOH 292 4 HOH HOH 292 A HOH 294 4 HOH HOH 294 A HOH 295 4 HOH HOH 295 A HOH 296 4 HOH HOH 296 A HOH 297 4 HOH HOH 297 A HOH 298 4 HOH HOH 298 A HOH 299 4 HOH HOH 299 A HOH 300 4 HOH HOH 300 A HOH 301 4 HOH HOH 301 A HOH 303 4 HOH HOH 303 A HOH 304 4 HOH HOH 304 A HOH 306 4 HOH HOH 306 A HOH 309 4 HOH HOH 309 A HOH 311 4 HOH HOH 311 A HOH 312 4 HOH HOH 312 A HOH 315 4 HOH HOH 315 A HOH 317 4 HOH HOH 317 A HOH 319 4 HOH HOH 319 A HOH 321 4 HOH HOH 321 A HOH 322 4 HOH HOH 322 A HOH 323 4 HOH HOH 323 A HOH 324 4 HOH HOH 324 A HOH 325 4 HOH HOH 325 A HOH 328 4 HOH HOH 328 A HOH 329 4 HOH HOH 329 A HOH 330 4 HOH HOH 330 A HOH 331 4 HOH HOH 331 A HOH 332 4 HOH HOH 332 A HOH 333 4 HOH HOH 333 A HOH 334 4 HOH HOH 334 A HOH 335 4 HOH HOH 335 A HOH 337 4 HOH HOH 337 A HOH 340 4 HOH HOH 340 A HOH 346 4 HOH HOH 346 A HOH 348 4 HOH HOH 348 A HOH 358 4 HOH HOH 358 A HOH 364 4 HOH HOH 364 A HOH 367 4 HOH HOH 367 A HOH 372 4 HOH HOH 372 A HOH 373 4 HOH HOH 373 A HOH 376 4 HOH HOH 376 A HOH 383 4 HOH HOH 383 A HOH 388 4 HOH HOH 388 A HOH 415 4 HOH HOH 415 A HOH 418 4 HOH HOH 418 A HOH 420 4 HOH HOH 420 A HOH 432 4 HOH HOH 432 A HOH 434 4 HOH HOH 434 A HOH 451 4 HOH HOH 451 A HOH 454 4 HOH HOH 454 A HOH 502 4 HOH HOH 502 A HOH 504 4 HOH HOH 504 A HOH 506 4 HOH HOH 506 A HOH 518 4 HOH HOH 518 A TRP 1 n 1 TRP 1 A SER 2 n 2 SER 2 A ALA 3 n 3 ALA 3 A GLU 4 n 4 GLU 4 A ASP 5 n 5 ASP 5 A LYS 6 n 6 LYS 6 A HIS 7 n 7 HIS 7 A LYS 8 n 8 LYS 8 A GLU 9 n 9 GLU 9 A GLY 10 n 10 GLY 10 A VAL 11 n 11 VAL 11 A ASN 12 n 12 ASN 12 A SER 13 n 13 SER 13 A HIS 14 n 14 HIS 14 A LEU 15 n 15 LEU 15 A TRP 16 n 16 TRP 16 A ILE 17 n 17 ILE 17 A VAL 18 n 18 VAL 18 A ASN 19 n 19 ASN 19 A ARG 20 n 20 ARG 20 A ALA 21 n 21 ALA 21 A ILE 22 n 22 ILE 22 A ASP 23 n 23 ASP 23 A ILE 24 n 24 ILE 24 A MET 25 n 25 MET 25 A SER 26 n 26 SER 26 A ARG 27 n 27 ARG 27 A ASN 28 n 28 ASN 28 A THR 29 n 29 THR 29 A THR 30 n 30 THR 30 A LEU 31 n 31 LEU 31 A VAL 32 n 32 VAL 32 A LYS 33 n 33 LYS 33 A GLN 34 n 34 GLN 34 A ASP 35 n 35 ASP 35 A ARG 36 n 36 ARG 36 A VAL 37 n 37 VAL 37 A ALA 38 n 38 ALA 38 A GLN 39 n 39 GLN 39 A LEU 40 n 40 LEU 40 A ASN 41 n 41 ASN 41 A GLU 42 n 42 GLU 42 A TRP 43 n 43 TRP 43 A ARG 44 n 44 ARG 44 A THR 45 n 45 THR 45 A GLU 46 n 46 GLU 46 A LEU 47 n 47 LEU 47 A GLU 48 n 48 GLU 48 A ASN 49 n 49 ASN 49 A GLY 50 n 50 GLY 50 A ILE 51 n 51 ILE 51 A TYR 52 n 52 TYR 52 A ALA 53 n 53 ALA 53 A ALA 54 n 54 ALA 54 A ASN 55 n 55 ASN 55 A TYR 56 n 56 TYR 56 A GLU 57 n 57 GLU 57 A ASN 58 n 58 ASN 58 A PRO 59 n 59 PRO 59 A TYR 60 n 60 TYR 60 A TYR 61 n 61 TYR 61 A ASP 62 n 62 ASP 62 A ASN 63 n 63 ASN 63 A SER 64 n 64 SER 64 A THR 65 n 65 THR 65 A PHE 66 n 66 PHE 66 A ALA 67 n 67 ALA 67 A SER 68 n 68 SER 68 A HIS 69 n 69 HIS 69 A PHE 70 n 70 PHE 70 A TYR 71 n 71 TYR 71 A ASP 72 n 72 ASP 72 A PRO 73 n 73 PRO 73 A ASP 74 n 74 ASP 74 A ASN 75 n 75 ASN 75 A GLY 76 n 76 GLY 76 A LYS 77 n 77 LYS 77 A THR 78 n 78 THR 78 A TYR 79 n 79 TYR 79 A ILE 80 n 80 ILE 80 A PRO 81 n 81 PRO 81 A PHE 82 n 82 PHE 82 A ALA 83 n 83 ALA 83 A LYS 84 n 84 LYS 84 A GLN 85 n 85 GLN 85 A ALA 86 n 86 ALA 86 A LYS 87 n 87 LYS 87 A GLU 88 n 88 GLU 88 A THR 89 n 89 THR 89 A GLY 90 n 90 GLY 90 A ALA 91 n 91 ALA 91 A LYS 92 n 92 LYS 92 A TYR 93 n 93 TYR 93 A PHE 94 n 94 PHE 94 A LYS 95 n 95 LYS 95 A LEU 96 n 96 LEU 96 A ALA 97 n 97 ALA 97 A GLY 98 n 98 GLY 98 A GLU 99 n 99 GLU 99 A SER 100 n 100 SER 100 A TYR 101 n 101 TYR 101 A LYS 102 n 102 LYS 102 A ASN 103 n 103 ASN 103 A LYS 104 n 104 LYS 104 A ASP 105 n 105 ASP 105 A MET 106 n 106 MET 106 A LYS 107 n 107 LYS 107 A GLN 108 n 108 GLN 108 A ALA 109 n 109 ALA 109 A PHE 110 n 110 PHE 110 A PHE 111 n 111 PHE 111 A TYR 112 n 112 TYR 112 A LEU 113 n 113 LEU 113 A GLY 114 n 114 GLY 114 A LEU 115 n 115 LEU 115 A SER 116 n 116 SER 116 A LEU 117 n 117 LEU 117 A HIS 118 n 118 HIS 118 A TYR 119 n 119 TYR 119 A LEU 120 n 120 LEU 120 A GLY 121 n 121 GLY 121 A ASP 122 n 122 ASP 122 A VAL 123 n 123 VAL 123 A ASN 124 n 124 ASN 124 A GLN 125 n 125 GLN 125 A PRO 126 n 126 PRO 126 A MET 127 n 127 MET 127 A HIS 128 n 128 HIS 128 A ALA 129 n 129 ALA 129 A ALA 130 n 130 ALA 130 A ASN 131 n 131 ASN 131 A PHE 132 n 132 PHE 132 A THR 133 n 133 THR 133 A ASN 134 n 134 ASN 134 A LEU 135 n 135 LEU 135 A SER 136 n 136 SER 136 A TYR 137 n 137 TYR 137 A PRO 138 n 138 PRO 138 A GLN 139 n 139 GLN 139 A GLY 140 n 140 GLY 140 A PHE 141 n 141 PHE 141 A HIS 142 n 142 HIS 142 A SER 143 n 143 SER 143 A LYS 144 n 144 LYS 144 A TYR 145 n 145 TYR 145 A GLU 146 n 146 GLU 146 A ASN 147 n 147 ASN 147 A PHE 148 n 148 PHE 148 A VAL 149 n 149 VAL 149 A ASP 150 n 150 ASP 150 A THR 151 n 151 THR 151 A ILE 152 n 152 ILE 152 A LYS 153 n 153 LYS 153 A ASP 154 n 154 ASP 154 A ASN 155 n 155 ASN 155 A TYR 156 n 156 TYR 156 A LYS 157 n 157 LYS 157 A VAL 158 n 158 VAL 158 A THR 159 n 159 THR 159 A ASP 160 n 160 ASP 160 A GLY 161 n 161 GLY 161 A ASN 162 n 162 ASN 162 A GLY 163 n 163 GLY 163 A TYR 164 n 164 TYR 164 A TRP 165 n 165 TRP 165 A ASN 166 n 166 ASN 166 A TRP 167 n 167 TRP 167 A LYS 168 n 168 LYS 168 A GLY 169 n 169 GLY 169 A THR 170 n 170 THR 170 A ASN 171 n 171 ASN 171 A PRO 172 n 172 PRO 172 A GLU 173 n 173 GLU 173 A GLU 174 n 174 GLU 174 A TRP 175 n 175 TRP 175 A ILE 176 n 176 ILE 176 A HIS 177 n 177 HIS 177 A GLY 178 n 178 GLY 178 A ALA 179 n 179 ALA 179 A ALA 180 n 180 ALA 180 A VAL 181 n 181 VAL 181 A VAL 182 n 182 VAL 182 A ALA 183 n 183 ALA 183 A LYS 184 n 184 LYS 184 A GLN 185 n 185 GLN 185 A ASP 186 n 186 ASP 186 A TYR 187 n 187 TYR 187 A SER 188 n 188 SER 188 A GLY 189 n 189 GLY 189 A ILE 190 n 190 ILE 190 A VAL 191 n 191 VAL 191 A ASN 192 n 192 ASN 192 A ASP 193 n 193 ASP 193 A ASN 194 n 194 ASN 194 A THR 195 n 195 THR 195 A LYS 196 n 196 LYS 196 A ASP 197 n 197 ASP 197 A TRP 198 n 198 TRP 198 A PHE 199 n 199 PHE 199 A VAL 200 n 200 VAL 200 A LYS 201 n 201 LYS 201 A ALA 202 n 202 ALA 202 A ALA 203 n 203 ALA 203 A VAL 204 n 204 VAL 204 A SER 205 n 205 SER 205 A GLN 206 n 206 GLN 206 A GLU 207 n 207 GLU 207 A TYR 208 n 208 TYR 208 A ALA 209 n 209 ALA 209 A ASP 210 n 210 ASP 210 A LYS 211 n 211 LYS 211 A TRP 212 n 212 TRP 212 A ARG 213 n 213 ARG 213 A ALA 214 n 214 ALA 214 A GLU 215 n 215 GLU 215 A VAL 216 n 216 VAL 216 A THR 217 n 217 THR 217 A PRO 218 n 218 PRO 218 A MET 219 n 219 MET 219 A THR 220 n 220 THR 220 A GLY 221 n 221 GLY 221 A LYS 222 n 222 LYS 222 A ARG 223 n 223 ARG 223 A LEU 224 n 224 LEU 224 A MET 225 n 225 MET 225 A ASP 226 n 226 ASP 226 A ALA 227 n 227 ALA 227 A GLN 228 n 228 GLN 228 A ARG 229 n 229 ARG 229 A VAL 230 n 230 VAL 230 A THR 231 n 231 THR 231 A ALA 232 n 232 ALA 232 A GLY 233 n 233 GLY 233 A TYR 234 n 234 TYR 234 A ILE 235 n 235 ILE 235 A GLN 236 n 236 GLN 236 A LEU 237 n 237 LEU 237 A TRP 238 n 238 TRP 238 A PHE 239 n 239 PHE 239 A ASP 240 n 240 ASP 240 A THR 241 n 241 THR 241 A TYR 242 n 242 TYR 242 A GLY 243 n 243 GLY 243 A ASP 244 n 244 ASP 244 A ARG 245 n 245 ARG 245 A author_defined_assembly 1 monomeric A TRP 1 A N TRP 1 1_555 A ZN 248 D ZN ZN 1_555 A TRP 1 A O TRP 1 1_555 74.6 A TRP 1 A N TRP 1 1_555 A ZN 248 D ZN ZN 1_555 A HIS 14 A NE2 HIS 14 1_555 109.6 A TRP 1 A O TRP 1 1_555 A ZN 248 D ZN ZN 1_555 A HIS 14 A NE2 HIS 14 1_555 91.6 A TRP 1 A N TRP 1 1_555 A ZN 248 D ZN ZN 1_555 A ASP 122 A OD1 ASP 122 1_555 90.5 A TRP 1 A O TRP 1 1_555 A ZN 248 D ZN ZN 1_555 A ASP 122 A OD1 ASP 122 1_555 165.0 A HIS 14 A NE2 HIS 14 1_555 A ZN 248 D ZN ZN 1_555 A ASP 122 A OD1 ASP 122 1_555 92.1 A TRP 1 A N TRP 1 1_555 A ZN 248 D ZN ZN 1_555 A 3PC 601 E O3 3PC 1_555 133.7 A TRP 1 A O TRP 1 1_555 A ZN 248 D ZN ZN 1_555 A 3PC 601 E O3 3PC 1_555 93.4 A HIS 14 A NE2 HIS 14 1_555 A ZN 248 D ZN ZN 1_555 A 3PC 601 E O3 3PC 1_555 115.4 A ASP 122 A OD1 ASP 122 1_555 A ZN 248 D ZN ZN 1_555 A 3PC 601 E O3 3PC 1_555 98.1 A ASN 55 A OD1 ASN 55 1_555 A ZN 246 B ZN ZN 1_555 A HIS 69 A ND1 HIS 69 1_555 79.4 A ASN 55 A OD1 ASN 55 1_555 A ZN 246 B ZN ZN 1_555 A HIS 118 A NE2 HIS 118 1_555 77.6 A HIS 69 A ND1 HIS 69 1_555 A ZN 246 B ZN ZN 1_555 A HIS 118 A NE2 HIS 118 1_555 101.5 A ASN 55 A OD1 ASN 55 1_555 A ZN 246 B ZN ZN 1_555 A ASP 122 A OD2 ASP 122 1_555 172.3 A HIS 69 A ND1 HIS 69 1_555 A ZN 246 B ZN ZN 1_555 A ASP 122 A OD2 ASP 122 1_555 96.4 A HIS 118 A NE2 HIS 118 1_555 A ZN 246 B ZN ZN 1_555 A ASP 122 A OD2 ASP 122 1_555 97.1 A ASN 55 A OD1 ASN 55 1_555 A ZN 246 B ZN ZN 1_555 A 3PC 601 E O3 3PC 1_555 78.5 A HIS 69 A ND1 HIS 69 1_555 A ZN 246 B ZN ZN 1_555 A 3PC 601 E O3 3PC 1_555 141.8 A HIS 118 A NE2 HIS 118 1_555 A ZN 246 B ZN ZN 1_555 A 3PC 601 E O3 3PC 1_555 103.7 A ASP 122 A OD2 ASP 122 1_555 A ZN 246 B ZN ZN 1_555 A 3PC 601 E O3 3PC 1_555 108.4 A HIS 128 A NE2 HIS 128 1_555 A ZN 247 C ZN ZN 1_555 A HIS 142 A NE2 HIS 142 1_555 101.2 A HIS 128 A NE2 HIS 128 1_555 A ZN 247 C ZN ZN 1_555 A GLU 146 A OE2 GLU 146 1_555 103.4 A HIS 142 A NE2 HIS 142 1_555 A ZN 247 C ZN ZN 1_555 A GLU 146 A OE2 GLU 146 1_555 100.4 A HIS 128 A NE2 HIS 128 1_555 A ZN 247 C ZN ZN 1_555 A GLU 146 A OE1 GLU 146 1_555 153.9 A HIS 142 A NE2 HIS 142 1_555 A ZN 247 C ZN ZN 1_555 A GLU 146 A OE1 GLU 146 1_555 93.6 A GLU 146 A OE2 GLU 146 1_555 A ZN 247 C ZN ZN 1_555 A GLU 146 A OE1 GLU 146 1_555 52.3 A HIS 128 A NE2 HIS 128 1_555 A ZN 247 C ZN ZN 1_555 A 3PC 601 E O2 3PC 1_555 90.6 A HIS 142 A NE2 HIS 142 1_555 A ZN 247 C ZN ZN 1_555 A 3PC 601 E O2 3PC 1_555 155.3 A GLU 146 A OE2 GLU 146 1_555 A ZN 247 C ZN ZN 1_555 A 3PC 601 E O2 3PC 1_555 97.8 A GLU 146 A OE1 GLU 146 1_555 A ZN 247 C ZN ZN 1_555 A 3PC 601 E O2 3PC 1_555 84.4 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A ALA 3 -160.65 51.87 1 A TYR 71 -163.53 114.06 1 A PHE 82 68.72 -1.04 1 A ASP 244 71.35 115.55 0.203 0.174 0.177 0.177 2.0 20.0 2026 20562 20562 99.3 RANDOM 1 0 0 FOURIER SYNTHESIS PDB ENTRY 1AH7 Engh & Huber 2.0 20.0 86 2132 33 0 2013 0.006 1.268 2.0 20 1P6D 20598 20598 0.0 0.0 0.074 1 23.7 5.0 99.3 0.181 2.00 2.07 3.6 98.3 data reduction DENZO data scaling SCALEPACK refinement CNS phasing CNS STRUCTURE OF THE D55N MUTANT OF PHOSPHOLIPASE C FROM BACILLUS CEREUS IN COMPLEX WITH (3S)-3,4,DI-N-HEXANOYLOXYBUTYL-1-PHOSPHOCHOLINE 1 N N 2 N N 2 N N 2 N N 3 N N 4 N N A LYS 8 A LYS 8 HELX_P A VAL 11 A VAL 11 5 1 4 A ASN 12 A ASN 12 HELX_P A ASN 28 A ASN 28 1 2 17 A GLN 34 A GLN 34 HELX_P A TRP 43 A TRP 43 1 3 10 A TRP 43 A TRP 43 HELX_P A ALA 54 A ALA 54 1 4 12 A PHE 66 A PHE 66 HELX_P A PHE 70 A PHE 70 5 5 5 A GLN 85 A GLN 85 HELX_P A ASN 103 A ASN 103 1 6 19 A ASP 105 A ASP 105 HELX_P A VAL 123 A VAL 123 1 7 19 A ASN 124 A ASN 124 HELX_P A ALA 130 A ALA 130 5 8 7 A GLY 140 A GLY 140 HELX_P A LYS 153 A LYS 153 1 9 14 A ASP 154 A ASP 154 HELX_P A LYS 157 A LYS 157 5 10 4 A ASN 171 A ASN 171 HELX_P A ASP 186 A ASP 186 1 11 16 A TYR 187 A TYR 187 HELX_P A ILE 190 A ILE 190 5 12 4 A ASN 192 A ASN 192 HELX_P A ALA 202 A ALA 202 1 13 11 A SER 205 A SER 205 HELX_P A GLY 243 A GLY 243 1 14 39 metalc 2.279 A TRP 1 A N TRP 1 1_555 A ZN 248 D ZN ZN 1_555 metalc 2.259 A TRP 1 A O TRP 1 1_555 A ZN 248 D ZN ZN 1_555 metalc 2.000 A HIS 14 A NE2 HIS 14 1_555 A ZN 248 D ZN ZN 1_555 metalc 2.688 A ASN 55 A OD1 ASN 55 1_555 A ZN 246 B ZN ZN 1_555 metalc 2.095 A HIS 69 A ND1 HIS 69 1_555 A ZN 246 B ZN ZN 1_555 metalc 2.097 A HIS 118 A NE2 HIS 118 1_555 A ZN 246 B ZN ZN 1_555 metalc 2.051 A ASP 122 A OD2 ASP 122 1_555 A ZN 246 B ZN ZN 1_555 metalc 2.117 A ASP 122 A OD1 ASP 122 1_555 A ZN 248 D ZN ZN 1_555 metalc 1.995 A HIS 128 A NE2 HIS 128 1_555 A ZN 247 C ZN ZN 1_555 metalc 2.039 A HIS 142 A NE2 HIS 142 1_555 A ZN 247 C ZN ZN 1_555 metalc 2.190 A GLU 146 A OE2 GLU 146 1_555 A ZN 247 C ZN ZN 1_555 metalc 2.675 A GLU 146 A OE1 GLU 146 1_555 A ZN 247 C ZN ZN 1_555 metalc 2.039 A ZN 246 B ZN ZN 1_555 A 3PC 601 E O3 3PC 1_555 metalc 2.062 A ZN 247 C ZN ZN 1_555 A 3PC 601 E O2 3PC 1_555 metalc 2.147 A ZN 248 D ZN ZN 1_555 A 3PC 601 E O3 3PC 1_555 HYDROLASE TRI ZN2+ METAL CORE, hydrolase A ASN 58 A ASN 58 1 A PRO 59 A PRO 59 -0.08 A TYR 137 A TYR 137 1 A PRO 138 A PRO 138 -0.04 PHLC_BACCE UNP 1 39 P09598 WSAEDKHKEGVNSHLWIVNRAIDIMSRNTTLVKQDRVAQLNEWRTELENGIYAADYENPYYDNSTFASHFYDPDNGKTYI PFAKQAKETGAKYFKLAGESYKNKDMKQAFFYLGLSLHYLGDVNQPMHAANFTNLSYPQGFHSKYENFVDTIKDNYKVTD GNGYWNWKGTNPEEWIHGAAVVAKQDYSGIVNDNTKDWFVKAAVSQEYADKWRAEVTPMTGKRLMDAQRVTAGYIQLWFD TYGDR 39 283 1P6D 1 245 P09598 A 1 1 245 1 ASP engineered mutation ASN 55 1P6D A P09598 UNP 93 55 BINDING SITE FOR RESIDUE ZN A 246 A ZN 246 Software 6 BINDING SITE FOR RESIDUE ZN A 247 A ZN 247 Software 4 BINDING SITE FOR RESIDUE ZN A 248 A ZN 248 Software 5 BINDING SITE FOR RESIDUE 3PC A 601 A 3PC 601 Software 18 A ASN 55 A ASN 55 6 1_555 A HIS 69 A HIS 69 6 1_555 A HIS 118 A HIS 118 6 1_555 A ASP 122 A ASP 122 6 1_555 A ZN 248 D ZN 6 1_555 A 3PC 601 E 3PC 6 1_555 A HIS 128 A HIS 128 4 1_555 A HIS 142 A HIS 142 4 1_555 A GLU 146 A GLU 146 4 1_555 A 3PC 601 E 3PC 4 1_555 A TRP 1 A TRP 1 5 1_555 A HIS 14 A HIS 14 5 1_555 A ASP 122 A ASP 122 5 1_555 A ZN 246 B ZN 5 1_555 A 3PC 601 E 3PC 5 1_555 A TRP 1 A TRP 1 18 1_555 A GLU 4 A GLU 4 18 1_555 A HIS 14 A HIS 14 18 1_555 A ASN 55 A ASN 55 18 1_555 A THR 65 A THR 65 18 1_555 A PHE 66 A PHE 66 18 1_555 A TYR 79 A TYR 79 18 1_555 A PRO 81 A PRO 81 18 7_555 A HIS 118 A HIS 118 18 1_555 A ASP 122 A ASP 122 18 1_555 A HIS 128 A HIS 128 18 1_555 A THR 133 A THR 133 18 1_555 A ASN 134 A ASN 134 18 1_555 A SER 143 A SER 143 18 1_555 A GLU 146 A GLU 146 18 1_555 A ZN 246 B ZN 18 1_555 A ZN 247 C ZN 18 1_555 A ZN 248 D ZN 18 1_555 96 P 43 21 2