1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Melckebeke, H.V. Vreuls, C. Gans, P. Llabres, G. Filee, P. Joris, B. Simorre, J.P. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK J.Mol.Biol. JMOBAK 0070 0022-2836 333 711 720 10.1016/j.jmb.2003.09.005 14568532 Solution structural study of BlaI: implications for the repression of genes involved in beta-lactam antibiotic resistance. 2003 10.2210/pdb1p6r/pdb pdb_00001p6r 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 SINGLE WAVELENGTH M 1 1.0 9512.079 Penicillinase repressor N-terminal domain (residues 1-82) 1 man polymer Regulatory protein blaI, Beta-lactamase repressor protein no no MKKIPQISDAELEVMKVIWKHSSINTNEVIKELSKTSTWSPKTIQTMLLRLIKKGALNHHKEGRVFVYTPNIDESDYIEV KS MKKIPQISDAELEVMKVIWKHSSINTNEVIKELSKTSTWSPKTIQTMLLRLIKKGALNHHKEGRVFVYTPNIDESDYIEV KS A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Bacillus Escherichia sample BLAI OR PENI 1402 Bacillus licheniformis 562 Escherichia coli BL21(DE3) pLys PLASMID pET22 database_2 pdbx_nmr_software pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 2003-12-09 1 1 2008-04-29 1 2 2011-07-13 1 3 2022-02-23 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_software.name RCSB Y RCSB 2003-04-30 REL REL structures with the lowest energy 80 19 2D NOESY 3D_13C-separated_NOESY 3D_15N-separated_NOESY 3D-13C-separated NOESY optimized for CH groups 4D 13C-separated-HSQC-NOESY-HSQC 300 mM KCl, 75 mM phosphate sodium 7.6 ambient 298 K 300 mM KCl, 75 mM phosphate sodium 7.6 ambient 298 K For structure calculation, a total of 1252 interproton and 110 dihedral restraints were used. The distance constraints contain 596 intraresidue, 205 sequential, 87 medium-range, 145 long-range, and 219 ambiguous correlations. simulated annealing, molecular dynamics 19 lowest energy U-15N 0.75 mM, phosphate buffer 75 mM pH 7.6, 300 mM KCl 90% H2O, 10% D2O 90% H2O/10% D2O U-15N-13C 0.50 mM, phosphate buffer 75 mM pH 7.6, 300 mM KCl 90% H2O, 10% D2O 90% H2O/10% D2O Accelrys processing Felix 2000 Accelrys structure solution Discover 2000 Pearlman refinement Amber 1991 Cornilescu data analysis TALOS 1999 800 Varian INOVA 600 Varian INOVA MET 1 n 1 MET 1 A LYS 2 n 2 LYS 2 A LYS 3 n 3 LYS 3 A ILE 4 n 4 ILE 4 A PRO 5 n 5 PRO 5 A GLN 6 n 6 GLN 6 A ILE 7 n 7 ILE 7 A SER 8 n 8 SER 8 A ASP 9 n 9 ASP 9 A ALA 10 n 10 ALA 10 A GLU 11 n 11 GLU 11 A LEU 12 n 12 LEU 12 A GLU 13 n 13 GLU 13 A VAL 14 n 14 VAL 14 A MET 15 n 15 MET 15 A LYS 16 n 16 LYS 16 A VAL 17 n 17 VAL 17 A ILE 18 n 18 ILE 18 A TRP 19 n 19 TRP 19 A LYS 20 n 20 LYS 20 A HIS 21 n 21 HIS 21 A SER 22 n 22 SER 22 A SER 23 n 23 SER 23 A ILE 24 n 24 ILE 24 A ASN 25 n 25 ASN 25 A THR 26 n 26 THR 26 A ASN 27 n 27 ASN 27 A GLU 28 n 28 GLU 28 A VAL 29 n 29 VAL 29 A ILE 30 n 30 ILE 30 A LYS 31 n 31 LYS 31 A GLU 32 n 32 GLU 32 A LEU 33 n 33 LEU 33 A SER 34 n 34 SER 34 A LYS 35 n 35 LYS 35 A THR 36 n 36 THR 36 A SER 37 n 37 SER 37 A THR 38 n 38 THR 38 A TRP 39 n 39 TRP 39 A SER 40 n 40 SER 40 A PRO 41 n 41 PRO 41 A LYS 42 n 42 LYS 42 A THR 43 n 43 THR 43 A ILE 44 n 44 ILE 44 A GLN 45 n 45 GLN 45 A THR 46 n 46 THR 46 A MET 47 n 47 MET 47 A LEU 48 n 48 LEU 48 A LEU 49 n 49 LEU 49 A ARG 50 n 50 ARG 50 A LEU 51 n 51 LEU 51 A ILE 52 n 52 ILE 52 A LYS 53 n 53 LYS 53 A LYS 54 n 54 LYS 54 A GLY 55 n 55 GLY 55 A ALA 56 n 56 ALA 56 A LEU 57 n 57 LEU 57 A ASN 58 n 58 ASN 58 A HIS 59 n 59 HIS 59 A HIS 60 n 60 HIS 60 A LYS 61 n 61 LYS 61 A GLU 62 n 62 GLU 62 A GLY 63 n 63 GLY 63 A ARG 64 n 64 ARG 64 A VAL 65 n 65 VAL 65 A PHE 66 n 66 PHE 66 A VAL 67 n 67 VAL 67 A TYR 68 n 68 TYR 68 A THR 69 n 69 THR 69 A PRO 70 n 70 PRO 70 A ASN 71 n 71 ASN 71 A ILE 72 n 72 ILE 72 A ASP 73 n 73 ASP 73 A GLU 74 n 74 GLU 74 A SER 75 n 75 SER 75 A ASP 76 n 76 ASP 76 A TYR 77 n 77 TYR 77 A ILE 78 n 78 ILE 78 A GLU 79 n 79 GLU 79 A VAL 80 n 80 VAL 80 A LYS 81 n 81 LYS 81 A SER 82 n 82 SER 82 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ILE 24 A N ILE 24 A O TYR 68 A O TYR 68 A O VAL 67 A O VAL 67 A N HIS 60 A N HIS 60 1 A TYR 68 0.133 SIDE CHAIN 1 A TYR 77 0.080 SIDE CHAIN 2 A PHE 66 0.093 SIDE CHAIN 2 A TYR 68 0.120 SIDE CHAIN 3 A TYR 68 0.086 SIDE CHAIN 3 A TYR 77 0.176 SIDE CHAIN 4 A TYR 68 0.083 SIDE CHAIN 6 A PHE 66 0.128 SIDE CHAIN 7 A TYR 68 0.141 SIDE CHAIN 8 A TYR 68 0.080 SIDE CHAIN 9 A TYR 68 0.070 SIDE CHAIN 10 A PHE 66 0.084 SIDE CHAIN 10 A TYR 68 0.128 SIDE CHAIN 11 A TYR 68 0.120 SIDE CHAIN 12 A PHE 66 0.076 SIDE CHAIN 13 A ARG 64 0.082 SIDE CHAIN 13 A TYR 77 0.122 SIDE CHAIN 14 A TYR 68 0.102 SIDE CHAIN 15 A TYR 68 0.093 SIDE CHAIN 16 A PHE 66 0.072 SIDE CHAIN 16 A TYR 68 0.101 SIDE CHAIN 17 A TYR 68 0.123 SIDE CHAIN 18 A PHE 66 0.091 SIDE CHAIN 18 A TYR 77 0.085 SIDE CHAIN 19 A TYR 68 0.142 SIDE CHAIN 1 A THR 38 -68.16 70.98 1 A ASP 73 -156.29 -55.36 1 A ASP 76 -68.32 81.44 1 A TYR 77 62.73 75.52 1 A LYS 81 -64.76 76.00 2 A SER 23 -131.93 -158.16 2 A GLU 62 -110.21 77.78 2 A SER 75 -65.38 -76.52 2 A ASP 76 -73.59 40.76 3 A LYS 2 60.54 -67.71 3 A SER 23 -131.91 -158.17 3 A THR 38 -68.29 60.41 3 A GLU 74 56.61 -78.59 3 A ASP 76 53.72 -77.90 4 A ILE 4 -152.40 74.04 4 A SER 23 -131.46 -157.90 4 A LYS 81 -179.23 -119.40 6 A SER 22 -98.83 -61.69 6 A GLU 74 62.18 -72.63 6 A TYR 77 -162.78 115.84 7 A LYS 2 68.92 -70.51 7 A SER 23 -132.68 -158.48 7 A THR 36 -93.24 -62.12 7 A THR 38 -67.84 66.43 7 A ASP 73 -155.11 -62.07 7 A ASP 76 48.82 -105.82 7 A LYS 81 -104.49 55.86 8 A ILE 4 33.20 61.71 8 A GLN 6 -69.26 78.96 8 A SER 23 -131.54 -157.57 8 A THR 36 -98.48 -70.03 8 A ALA 56 -97.97 -70.54 8 A PRO 70 -64.33 88.51 8 A GLU 74 -34.41 -70.83 8 A SER 75 -90.49 31.39 8 A LYS 81 60.79 -131.37 9 A LYS 3 -150.25 -57.44 9 A SER 23 -132.50 -157.26 9 A THR 38 -65.30 81.74 10 A ILE 4 -155.36 68.65 10 A SER 23 -132.71 -159.66 10 A THR 38 -69.24 70.40 10 A TYR 77 -72.99 49.99 11 A SER 23 -132.44 -158.25 11 A THR 38 -64.83 78.76 11 A ASP 76 -94.87 33.05 11 A TYR 77 -64.17 -78.17 11 A LYS 81 -158.94 -50.12 12 A GLN 6 -80.35 48.29 12 A SER 23 -130.65 -156.60 12 A LYS 54 -72.48 26.66 12 A ALA 56 -131.25 -39.55 13 A LYS 2 67.16 91.21 13 A LYS 3 68.11 -76.38 13 A ILE 4 -33.15 99.61 13 A SER 23 -131.62 -158.10 13 A ASP 73 -155.48 -54.18 13 A SER 75 -74.33 47.97 13 A ASP 76 -47.72 94.68 14 A LYS 3 66.96 -67.17 14 A PRO 5 -49.73 157.45 14 A SER 23 -131.29 -157.21 14 A THR 38 -67.79 65.92 14 A LYS 54 -71.81 26.90 14 A ALA 56 -121.74 -58.11 15 A ILE 4 -29.00 -64.08 15 A SER 23 -129.21 -157.90 15 A LYS 54 -72.20 26.45 15 A GLU 74 56.55 -81.86 15 A SER 75 -87.53 49.92 15 A ASP 76 -84.61 -156.54 16 A HIS 21 -66.86 -174.30 16 A SER 22 -98.79 -60.98 16 A ARG 64 -171.95 -58.69 16 A LYS 81 59.06 -135.21 17 A SER 23 -131.90 -157.87 17 A THR 38 -62.56 80.25 17 A GLU 74 57.40 -71.15 17 A SER 75 -25.39 -92.03 17 A ASP 76 105.92 150.67 18 A SER 23 -132.37 -158.26 19 A SER 23 -132.24 -158.01 Solution structure of the DNA binding domain of the repressor BlaI. 1 N N A SER 8 A SER 8 HELX_P A LYS 20 A LYS 20 1 1 13 A THR 26 A THR 26 HELX_P A SER 37 A SER 37 1 2 12 A SER 40 A SER 40 HELX_P A LYS 54 A LYS 54 1 3 15 TRANSCRIPTION Transcription regulation, Repressor, DNA-binding, Winged Helix Protein, Bacterial resistance to antibiotics, TRANSCRIPTION BLAI_BACLI UNP 1 1 P06555 MKKIPQISDAELEVMKVIWKHSSINTNEVIKELSKTSTWSPKTIQTMLLRLIKKGALNHHKEGRVFVYTPNIDESDYIEV KS 1 82 1P6R 1 82 P06555 A 1 1 82 3 anti-parallel anti-parallel A ILE 24 A ILE 24 A ASN 25 A ASN 25 A VAL 65 A VAL 65 A PRO 70 A PRO 70 A LEU 57 A LEU 57 A GLU 62 A GLU 62